Pregenerated sensors for TMCO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052428Ensembl transcript IDs: ENSMUST00000097473.10, ENSMUST00000193101.2, ENSMUST00000193446.6, ENSMUST00000195015.6
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACACACCTGTCCCTGGAGACCTTCAGTGCACCACTCCTACGGTGTaGAGGGGCACGCCTCCAGGATCAGGTCCGGCAGGAATCTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: HTPVPGDLQCTTPTV*RGTPPGSGPAGIWC Trigger: ACACCAGATTCCTGCCGGACCTGATCCTGGAGGCGTGCCCCTTCACACCGTAGGAGTGGTGCACTGAAGGTCTCCAGGGACAGGTGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR TCA 90 bp | AGACTGGCCTGTAGCCATGTCTGTGAGAGTCTCTGGATTGGTGAGTaGTGGAGGAGGGCCTGCTCCAACCCTGCACAGTTACAGTATGTG | + |
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Preference number: 1 (lower is better) Translates to: RLACSHVCESLWIGE*WRRACSNPAQLQYV Trigger: CACATACTGTAACTGTGCAGGGTTGGAGCAGGCCCTCCTCCATCACTCACCAATCCAGAGACTCTCACAGACATGGCTACAGGCCAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR GCA 90 bp | CAATCTCTGGAGCTGAGGACAGAGCTCAGTGGCACAGTGCTTATCTaGAAGGAGCACAGTCCCAGGTGTGATTCCCAACACTACCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: QSLELRTELSGTVLI*KEHSPRCDSQHYQV Trigger: GACTTGGTAGTGTTGGGAATCACACCTGGGACTGTGCTCCTTGCAGATAAGCACTGTGCCACTGAGCTCTGTCCTCAGCTCCAGAGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR TCA 90 bp | ACCCTGTATGGCTGTAACGTGAAATTACAGTACAATCTCTGGAGCTaGGGACAGAGCTCAGTGGCACAGTGCTTATCTGCAAGGAGCACA | + |
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Preference number: 1 (lower is better) Translates to: TLYGCNVKLQYNLWS*GQSSVAQCLSARST Trigger: TGTGCTCCTTGCAGATAAGCACTGTGCCACTGAGCTCTGTCCTCAGCTCCAGAGATTGTACTGTAATTTCACGTTACAGCCATACAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR CCA 90 bp | GTAGACCAATGTTATGCAATCCAAACTGTAGGAACCAAAGCAAGATaGGCAGGAGTCAGGCAGACTCTGTCCAGAGTCAGCTACATGGAG | + |
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Preference number: 1 (lower is better) Translates to: VDQCYAIQTVGTKAR*AGVRQTLSRVSYME Trigger: CTCCATGTAGCTGACTCTGGACAGAGTCTGCCTGACTCCTGCCCATCTTGCTTTGGTTCCTACAGTTTGGATTGCATAACATTGGTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR CCA 90 bp | GTTCGTACTGTTTCTACTGTCACCTTTATGGAACCCAGAGTCACCTaGCAAGAGGGACTATCAACTAAGAAGTTCCCTAGGTCAGACTGG | + |
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Preference number: 1 (lower is better) Translates to: VRTVSTVTFMEPRVT*QEGLSTKKFPRSDW Trigger: CCAGTCTGACCTAGGGAACTTCTTAGTTGATAGTCCCTCTTGCCAGGTGACTCTGGGTTCCATAAAGGTGACAGTAGAAACAGTACGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR TCA 90 bp | CTTGTTTTACGGAGACAGGGTCTCAAATATCTCAGGCTGTTGACTTaGCCTTCTCTGATCCTCCTGCTGCCAATCCTAAGTGCTGGTATT | + |
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Preference number: 1 (lower is better) Translates to: LVLRRQGLKYLRLLT*PSLILLLPILSAGI Trigger: AATACCAGCACTTAGGATTGGCAGCAGGAGGATCAGAGAAGGTCAAGTCAACAGCCTGAGATATTTGAGACCCTGTCTCCGTAAAACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR GCA 90 bp | CTGTTCCCTATCAAAATCGGTACATTCCAGAAACTTCACTCACACTaGTGGCTAACGCTTGCACTACTGTTGGGACTTCCATGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: LFPIKIGTFQKLHSH*WLTLALLLGLPCVC Trigger: ACACACACATGGAAGTCCCAACAGTAGTGCAAGCGTTAGCCAGCAGTGTGAGTGAAGTTTCTGGAATGTACCGATTTTGATAGGGAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR CCA 90 bp | GCTTCTGGTTCTGGCCAGTGTTTGACAAAACACCAGAAAGCCAACTaGAACACGTTCAAAGTGTACACTGGGACAATCCCACATTTTGAA | + |
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Preference number: 1 (lower is better) Translates to: ASGSGQCLTKHQKAN*NTFKVYTGTIPHFE Trigger: TTCAAAATGTGGGATTGTCCCAGTGTACACTTTGAACGTGTTCCAGTTGGCTTTCTGGTGTTTTGTCAAACACTGGCCAGAACCAGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR TCA 90 bp | GAATGCAAGTCAGAGAAGGAAAGAAAGATCCTACCCTGGGCAGTTTaGGCTCACGATGGATCTTCCTTTGAAATAGCAGCACATATTATG | + |
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Preference number: 1 (lower is better) Translates to: ECKSEKERKILPWAV*AHDGSSFEIAAHIM Trigger: CATAATATGTGCTGCTATTTCAAAGGAAGATCCATCGTGAGCTCAAACTGCCCAGGGTAGGATCTTTCTTTCCTTCTCTGACTTGCATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR CCA 90 bp | AAATTACTTCAGATAACCTTAGCACCTGCCCATGGTTCTCCCATGTaGAGTCTTATGATCACAGTTACACTCAGTAAACAAGCACAACCA | + |
|
Preference number: 1 (lower is better) Translates to: KLLQITLAPAHGSPM*SLMITVTLSKQAQP Trigger: TGGTTGTGCTTGTTTACTGAGTGTAACTGTGATCATAAGACTCCACATGGGAGAACCATGGGCAGGTGCTAAGGTTATCTGAAGTAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR CCA 90 bp | TCCTGGATCCATACAAAAATATATTTAGCTTCCACCTGCAAAAAGTaGCCATTTGATTATCATCTCACTAGACTTGCACCTGTCTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: SWIHTKIYLASTCKK*PFDYHLTRLAPVSF Trigger: GAAGGAGACAGGTGCAAGTCTAGTGAGATGATAATCAAATGGCCACTTTTTGCAGGTGGAAGCTAAATATATTTTTGTATGGATCCAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR GCA 90 bp | GCCAATGAATCCTGGATCCATACAAAAATATATTTAGCTTCCACCTaGAAAAAGTGGCCATTTGATTATCATCTCACTAGACTTGCACCT | + |
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Preference number: 1 (lower is better) Translates to: ANESWIHTKIYLAST*KKWPFDYHLTRLAP Trigger: AGGTGCAAGTCTAGTGAGATGATAATCAAATGGCCACTTTTTGCAGGTGGAAGCTAAATATATTTTTGTATGGATCCAGGATTCATTGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR TCA 90 bp | ACAGTCTGCTTCTGTGTATATGGCACATACACTGAAATACTCAAGTaGGACAAGAAAGATGATGTTTGTGGTTACATAAGCCATCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: TVCFCVYGTYTEILK*DKKDDVCGYISHPN Trigger: ATTTGGATGGCTTATGTAACCACAAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCATATACACAGAAGCAGACTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
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| 3UTR-3UTR GCA 90 bp | CAGTTACAGTATGTGAGCTTTTCTAGGTGGGTGGGCCCGGCTGCTAAGAGGAGGTTTCCTCCCCTAAGCTaGTTCTGGTTCTGGCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: QLQYVSFSRWVGPAAKRRFPPLS*FWFWPV Trigger: CACTGGCCAGAACCAGAAGCAGCTTAGGGGAGGAAA...CCTCCTCTTAGCAGCCGGGCCCACCCACCTAGAAAAGCTCACATACTGTAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGTATGCCCATGGGTAAGTGTGTGGTTCTCCCCATCCATAGTTCCTGTTCTATCCGTCAGCGGCTGCTaGCAGTCAAGCAGGAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: CVCPWVSVWFSPSIVPVLSVSGC*QSSRSP Trigger: AGGACTCCTGCTTGACTGGCAGCAGCCGCTGACGGA...TAGAACAGGAACTATGGATGGGGAGAACCACACACTTACCCATGGGCATACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTACCACCAGGTCAAGCAGTCTCCGCGATTTCTTAGCTCTCTTCATAAGACACTCTGGATTGGTGAGTaGTGGAGGAGGGCCTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: FYHQVKQSPRFLSSLHKTLWIGE*WRRACS Trigger: GGAGCAGGCCCTCCTCCATCACTCACCAATCCAGAG...TGTCTTATGAAGAGAGCTAAGAAATCGCGGAGACTGCTTGACCTGGTGGTAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR TCA 90 bp | ATCCTCCTGCTGCCAATCCTAAGTGCTGGTATTACAGGCATAAACTTCCACCCGTACAATCTCTGGAGCTaGGGACAGAGCTCAGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: ILLLPILSAGITGINFHPYNLWS*GQSSVA Trigger: TGCCACTGAGCTCTGTCCTCAGCTCCAGAGATTGTA...CGGGTGGAAGTTTATGCCTGTAATACCAGCACTTAGGATTGGCAGCAGGAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR CCA 90 bp | ATCCTCCTGCTGCCAATCCTAAGTGCTGGTATTACAGGCATAAACTTCCACCCGCTTAGCACCTGCCCATaGTTCTCCCATGTGGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: ILLLPILSAGITGINFHPLSTCP*FSHVES Trigger: AGACTCCACATGGGAGAACCATGGGCAGGTGCTAAG...CGGGTGGAAGTTTATGCCTGTAATACCAGCACTTAGGATTGGCAGCAGGAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR TCA 90 bp | GTAGAAAGACAAGGAACCCGAACCCCAAGGGTCAGAGTGTTTGCTGGTTTTCTGCTTTTCCCCCAATGGTaGACTATGACCCGGAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: VERQGTRTPRVRVFAGFLLFPQW*TMTRKH Trigger: ATGCTTCCGGGTCATAGTTCACCATTGGGGGAAAAG...CAGAAAACCAGCAAACACTCTGACCCTTGGGGTTCGGGTTCCTTGTCTTTCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR GCA 90 bp | GCTTGTTTTACGGAGACAGGGTCTCAAATATCTCAGGCTGTTGACTTGACCTTCGGCACAGTGCTTATCTaGAAGGAGCACAGTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ACFTETGSQISQAVDLTFGTVLI*KEHSPR Trigger: CCTGGGACTGTGCTCCTTGCAGATAAGCACTGTGCC...GAAGGTCAAGTCAACAGCCTGAGATATTTGAGACCCTGTCTCCGTAAAACAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR GCA 90 bp | ATCCTCCTGCTGCCAATCCTAAGTGCTGGTATTACAGGCATAAACTTCCACCCGAGCTCAGTGGCACAGTaGTTATCTGCAAGGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: ILLLPILSAGITGINFHPSSVAQ*LSARST Trigger: TGTGCTCCTTGCAGATAAGCACTGTGCCACTGAGCT...CGGGTGGAAGTTTATGCCTGTAATACCAGCACTTAGGATTGGCAGCAGGAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTACCACCAGGTCAAGCAGTCTCCGCGATTTCTTAGCTCTCTTCATAAGACAACACACACCTGTCCCTaGAGACCTTCAGTGCACCAC | + |
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Preference number: 2 (lower is better) Translates to: FYHQVKQSPRFLSSLHKTTHTCP*RPSVHH Trigger: GTGGTGCACTGAAGGTCTCCAGGGACAGGTGTGTGT...TGTCTTATGAAGAGAGCTAAGAAATCGCGGAGACTGCTTGACCTGGTGGTAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR TCA 90 bp | ATCCTCCTGCTGCCAATCCTAAGTGCTGGTATTACAGGCATAAACTTCCACCCGGTTCTGGCCAGTGTTTaGCAAAACACCAGAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: ILLLPILSAGITGINFHPVLASV*QNTRKP Trigger: TGGCTTTCTGGTGTTTTGTCAAACACTGGCCAGAAC...CGGGTGGAAGTTTATGCCTGTAATACCAGCACTTAGGATTGGCAGCAGGAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTTGTAGTTTAGAAAGCAAGCAGGAAAAGCACGGTGCTGAAGTGTTTATTGAGTCTCTGGATTGGTaGGTGATGGAGGAGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LGCSLESKQEKHGAEVFIESLDW*VMEEGL Trigger: CAGGCCCTCCTCCATCACTCACCAATCCAGAGACTC...AATAAACACTTCAGCACCGTGCTTTTCCTGCTTGCTTTCTAAACTACAACCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR GCA 90 bp | TTCTACCACCAGGTCAAGCAGTCTCCGCGATTTCTTAGCTCTCTTCATAAGACAGGCCTGCTCCAACCCTaGACAGTTACAGTATGTGAG | + |
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Preference number: 2 (lower is better) Translates to: FYHQVKQSPRFLSSLHKTGLLQP*TVTVCE Trigger: CTCACATACTGTAACTGTGCAGGGTTGGAGCAGGCC...TGTCTTATGAAGAGAGCTAAGAAATCGCGGAGACTGCTTGACCTGGTGGTAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR GCA 90 bp | TTCTACCACCAGGTCAAGCAGTCTCCGCGATTTCTTAGCTCTCTTCATAAGACAACGAGTTCCCCTCACTaGACTGTCCCTTTCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: FYHQVKQSPRFLSSLHKTTSSPH*TVPFLS Trigger: GGAAAGGAAAGGGACAGTGCAGTGAGGGGAACTCGT...TGTCTTATGAAGAGAGCTAAGAAATCGCGGAGACTGCTTGACCTGGTGGTAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR CAA 90 bp | GCTTGTTTTACGGAGACAGGGTCTCAAATATCTCAGGCTGTTGACTaGACCTTCTCTGATCCTCCTGCTGCCAATCCTAAGTGCTGGTAT | + |
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Preference number: 2 (lower is better) Translates to: ACFTETGSQISQAVD*TFSDPPAANPKCWY Trigger: ATACCAGCACTTAGGATTGGCAGCAGGAGGATCAGAGAAGGTCAAGTCAACAGCCTGAGATATTTGAGACCCTGTCTCCGTAAAACAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR GCA 90 bp | ATCCTCCTGCTGCCAATCCTAAGTGCTGGTATTACAGGCATAAACTTCCACCCGAAACTTCACTCACACTaGTGGCTAACGCTTGCACTA | + |
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Preference number: 2 (lower is better) Translates to: ILLLPILSAGITGINFHPKLHSH*WLTLAL Trigger: TAGTGCAAGCGTTAGCCAGCAGTGTGAGTGAAGTTT...CGGGTGGAAGTTTATGCCTGTAATACCAGCACTTAGGATTGGCAGCAGGAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTTGTAGTTTAGAAAGCAAGCAGGAAAAGCACGGTGCTGAAGTGTTTATTTTCCATGAAGCCATCTaGACACGGGGCAGTGGAACT | + |
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Preference number: 2 (lower is better) Translates to: LGCSLESKQEKHGAEVFIFHEAI*TRGSGT Trigger: AGTTCCACTGCCCCGTGTTCAGATGGCTTCATGGAA...AATAAACACTTCAGCACCGTGCTTTTCCTGCTTGCTTTCTAAACTACAACCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGCCTAGAAACCCACTAAAAACCCTGTATGGCTGTAACGTGAAATTACAGCTACTGTCACCTTTATaGAACCCAGAGTCACCTGGC | + |
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Preference number: 2 (lower is better) Translates to: WWPRNPLKTLYGCNVKLQLLSPL*NPESPG Trigger: GCCAGGTGACTCTGGGTTCCATAAAGGTGACAGTAG...CTGTAATTTCACGTTACAGCCATACAGGGTTTTTAGTGGGTTTCTAGGCCACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR TCA 90 bp | CTGGGTTGTAGTTTAGAAAGCAAGCAGGAAAAGCACGGTGCTGAAGTGTTTATTTGTACTTACCTTCCATaGAGCCATCTGAACACGGGG | + |
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Preference number: 2 (lower is better) Translates to: LGCSLESKQEKHGAEVFICTYLP*SHLNTG Trigger: CCCCGTGTTCAGATGGCTTCATGGAAGGTAAGTACA...AATAAACACTTCAGCACCGTGCTTTTCCTGCTTGCTTTCTAAACTACAACCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR GCA 90 bp | ATCCTCCTGCTGCCAATCCTAAGTGCTGGTATTACAGGCATAAACTTCCACCCGTCCTTACCATGGCTGTaGTCTAATCAACAACAACAA | + |
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Preference number: 2 (lower is better) Translates to: ILLLPILSAGITGINFHPSLPWL*SNQQQQ Trigger: TTGTTGTTGTTGATTAGAGCACAGCCATGGTAAGGA...CGGGTGGAAGTTTATGCCTGTAATACCAGCACTTAGGATTGGCAGCAGGAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR CCA 90 bp | TGGCCTAGAAACCCACTAAAAACCCTGTATGGCTGTAACGTGAAATTACAGTACGAGGACAGAGCTCAGTaGCACAGTGCTTATCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: WPRNPLKTLYGCNVKLQYEDRAQ*HSAYLQ Trigger: TTGCAGATAAGCACTGTGCCACTGAGCTCTGTCCTC...GTACTGTAATTTCACGTTACAGCCATACAGGGTTTTTAGTGGGTTTCTAGGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR CCA 90 bp | TGGCCATTTGATTATCATCTCACTAGACTTGCACCTGTCTCCTTCCTTACAGTGGGTAGCACAGGGCCATaGATGCTATTCTGTAATGGT | + |
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Preference number: 2 (lower is better) Translates to: WPFDYHLTRLAPVSFLTVGSTGP*MLFCNG Trigger: ACCATTACAGAATAGCATCCATGGCCCTGTGCTACC...CACTGTAAGGAAGGAGACAGGTGCAAGTCTAGTGAGATGATAATCAAATGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGTTCTAAACCCTGCAATCCTAAATGAACATTTGATAAAGGGAATGCAAGTCCCCCTAAGCTGCTTCTaGTTCTGGCCAGTGTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: PVLNPAILNEHLIKGMQVPLSCF*FWPVFD Trigger: GTCAAACACTGGCCAGAACCAGAAGCAGCTTAGGGG...GACTTGCATTCCCTTTATCAAATGTTCATTTAGGATTGCAGGGTTTAGAACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR GCA 90 bp | TGGCCATTTGATTATCATCTCACTAGACTTGCACCTGTCTCCTTCCTTACAGTGAGTCTAACCCAACTATaGACAGGTCTGAGAAACCTT | + |
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Preference number: 2 (lower is better) Translates to: WPFDYHLTRLAPVSFLTVSLTQL*TGLRNL Trigger: AAGGTTTCTCAGACCTGTGCATAGTTGGGTTAGACT...CACTGTAAGGAAGGAGACAGGTGCAAGTCTAGTGAGATGATAATCAAATGGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR CCA 90 bp | TGGCCTAGAAACCCACTAAAAACCCTGTATGGCTGTAACGTGAAATTACAGTACCACCAGAAAGCCAACTaGAACACGTTCAAAGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: WPRNPLKTLYGCNVKLQYHQKAN*NTFKVY Trigger: GTACACTTTGAACGTGTTCCAGTTGGCTTTCTGGTG...GTACTGTAATTTCACGTTACAGCCATACAGGGTTTTTAGTGGGTTTCTAGGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR GCA 90 bp | CTGGGTTGTAGTTTAGAAAGCAAGCAGGAAAAGCACGGTGCTGAAGTGTTTATTAAGGGTCAGAGTGTTTaGTGGTTTTCTGATCTACTA | + |
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Preference number: 2 (lower is better) Translates to: LGCSLESKQEKHGAEVFIKGQSV*WFSDLL Trigger: TAGTAGATCAGAAAACCAGCAAACACTCTGACCCTT...AATAAACACTTCAGCACCGTGCTTTTCCTGCTTGCTTTCTAAACTACAACCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR CAA 90 bp | AAGGGTCAGAGTGTTTGCTGGTTTTCTGATCTACTAGTATGGGATTaGAGGACAAATCATGTAAAAATCTCTAAACCTGTTGCTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: KGQSVCWFSDLLVWD*RTNHVKISKPVACF Trigger: AAAACAAGCAACAGGTTTAGAGATTTTTACATGATTTGTCCTCAAATCCCATACTAGTAGATCAGAAAACCAGCAAACACTCTGACCCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR CCA 90 bp | AATGAATCCTGGATCCATACAAAAATATATTTAGCTTCCACCTGCAAAAAGTGGGGTCAGAGTGTTTGCTaGTTTTCTGATCTACTAGTA | + |
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Preference number: 2 (lower is better) Translates to: NESWIHTKIYLASTCKKWGQSVC*FSDLLV Trigger: TACTAGTAGATCAGAAAACCAGCAAACACTCTGACC...CCACTTTTTGCAGGTGGAAGCTAAATATATTTTTGTATGGATCCAGGATTCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR TCA 90 bp | AATGAATCCTGGATCCATACAAAAATATATTTAGCTTCCACCTGCAAAAAGTGGCGATGGATCTTCCTTTaGAATAGCAGCACATATTAT | + |
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Preference number: 2 (lower is better) Translates to: NESWIHTKIYLASTCKKWRWIFL*NSSTYY Trigger: ATAATATGTGCTGCTATTTCAAAGGAAGATCCATCG...CCACTTTTTGCAGGTGGAAGCTAAATATATTTTTGTATGGATCCAGGATTCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR TCA 90 bp | GTGTATATGGCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTGTGAGACAAGAAAGATaGTGTTTGTGGTTACATAAG | + |
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Preference number: 2 (lower is better) Translates to: VYMAHTLKYSSETRKMMFVRQER*CLWLHK Trigger: CTTATGTAACCACAAACATCATCTTTCTTGTCTCAC...AAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCATATACAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
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| 3UTR-3UTR CAA 90 bp | GTGCACCACTCCTACGGTGTGAAGGGGCACGCCTCCAGGATCAGGTCCGGCAGGGTGAGAGTCTCTGGATaGGTGAGTGATGGAGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: VHHSYGVKGHASRIRSGRVRVSG*VSDGGG Trigger: CCCTCCTCCATCACTCACCAATCCAGAGACTCTCAC...CCTGCCGGACCTGATCCTGGAGGCGTGCCCCTTCACACCGTAGGAGTGGTGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR GCA 72 bp | AGGGGAAGCAGCCCTTCCTCTTCCGTCAGCGGCTGCTaGCAGTCAAGCAGGAGTCCTCGAGACAAGCACGAG | + |
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Preference number: 3 (lower is better) Translates to: RGSSPSSSVSGC*QSSRSPRDKHE Trigger: CTCGTGCTTGTCTCGAGGACTCCTGCTTGACTGGCAGCAGCCGCTGACGGAAGAGGAAGGGCTGCTTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| 3UTR-3UTR CAA 90 bp | TTCAGTGCACCACTCCTACGGTGTGAAGGGGCACGCCTCCAGGATCAGGTCCGGGGTTCTGGCCAGTGTTaGACAAAACACCAGAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: FSAPLLRCEGARLQDQVRGSGQC*TKHQKA Trigger: GGCTTTCTGGTGTTTTGTCAAACACTGGCCAGAACC...CCGGACCTGATCCTGGAGGCGTGCCCCTTCACACCGTAGGAGTGGTGCACTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR GCA 72 bp | GAGCTGAGGACAGAGCTCAGTGGCACAGTGCTTATCTaGAAGGAGCACAGTCCCAGGTGTGATTCCCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: ELRTELSGTVLI*KEHSPRCDSQH Trigger: GTGTTGGGAATCACACCTGGGACTGTGCTCCTTGCAGATAAGCACTGTGCCACTGAGCTCTGTCCTCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR CCA 72 bp | TGTTGGTGGAGGACACCCCCTGGCATAACCATGCCCTaGCCTGCTGACGTTCTTTGTCACCTTGTAGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: CWWRTPPGITMP*PADVLCHLVAI Trigger: AATGGCTACAAGGTGACAAAGAACGTCAGCAGGCCAGGGCATGGTTATGCCAGGGGGTGTCCTCCACCAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR GCA 72 bp | GCAGGAGTCCTCGAGACAAGCACGAGTTCCCCTCACTaGACTGTCCCTTTCCTTTCCAAGCTTACAGTTCGT | + |
|
Preference number: 3 (lower is better) Translates to: AGVLETSTSSPH*TVPFLSKLTVR Trigger: ACGAACTGTAAGCTTGGAAAGGAAAGGGACAGTGCAGTGAGGGGAACTCGTGCTTGTCTCGAGGACTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR GCA 72 bp | ATGCACAGGTCTGAGAAACCTTGCACAAGGTGGTCTTaGCATTCCCATGGGTCTGAGACACGGGGGTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: MHRSEKPCTRWS*HSHGSETRGSL Trigger: TAAGGACCCCCGTGTCTCAGACCCATGGGAATGGCAAGACCACCTTGTGCAAGGTTTCTCAGACCTGTGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR TCA 72 bp | GTTCGCTCCTCCCACCATGGGTCAAGTCCTCAAGTTTaGATGATGAACACACACCTGTCCCTGGAGACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VRSSHHGSSPQV*MMNTHLSLETF Trigger: GAAGGTCTCCAGGGACAGGTGTGTGTTCATCATTCAAACTTGAGGACTTGACCCATGGTGGGAGGAGCGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR CCA 72 bp | GTAGCCATCCTCCACAGCTTCCGCCTTGGGTCTTGCTaGAGTTCTAACCTCTTTTCCCCCAATGGTGAACTA | + |
|
Preference number: 3 (lower is better) Translates to: VAILHSFRLGSC*SSNLFSPNGEL Trigger: TAGTTCACCATTGGGGGAAAAGAGGTTAGAACTCCAGCAAGACCCAAGGCGGAAGCTGTGGAGGATGGCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR CCA 72 bp | TACAGTACAATCTCTGGAGCTGAGGACAGAGCTCAGTaGCACAGTGCTTATCTGCAAGGAGCACAGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: YSTISGAEDRAQ*HSAYLQGAQSQ Trigger: CTGGGACTGTGCTCCTTGCAGATAAGCACTGTGCCACTGAGCTCTGTCCTCAGCTCCAGAGATTGTACTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR TCA 72 bp | TCGCAGAAAGGTCTAGAAACAGCAAGGCAGTGCCCATaGGCATCTAGTGCTGGGACGGAACTCCATACTACT | + |
|
Preference number: 3 (lower is better) Translates to: SQKGLETARQCP*ASSAGTELHTT Trigger: AGTAGTATGGAGTTCCGTCCCAGCACTAGATGCTCATGGGCACTGCCTTGCTGTTTCTAGACCTTTCTGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR TCA 72 bp | CGGAGACAGGGTCTCAAATATCTCAGGCTGTTGACTTaGCCTTCTCTGATCCTCCTGCTGCCAATCCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: RRQGLKYLRLLT*PSLILLLPILS Trigger: ACTTAGGATTGGCAGCAGGAGGATCAGAGAAGGTCAAGTCAACAGCCTGAGATATTTGAGACCCTGTCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR TCA 72 bp | ACTTTAACAGGACCAAAGGAGTCAGCACTGCAGCTATaGGGTAGAAAGACAAGGAACCCGAACCCCAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TLTGPKESALQL*GRKTRNPNPKG Trigger: ACCCTTGGGGTTCGGGTTCCTTGTCTTTCTACCTCATAGCTGCAGTGCTGACTCCTTTGGTCCTGTTAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR GCA 72 bp | CATGGGTCTGAGACACGGGGGTCCTTACCATGGCTGTaGTCTAATCAACAACAACAACAACAACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: HGSETRGSLPWL*SNQQQQQQHTH Trigger: GTGTGTGTGTTGTTGTTGTTGTTGTTGATTAGAGCACAGCCATGGTAAGGACCCCCGTGTCTCAGACCCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR GCA 72 bp | TTGACCTTCTCTGATCCTCCTGCTGCCAATCCTAAGTaGTGGTATTACAGGCATAAACTTCCACCCGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LTFSDPPAANPK*WYYRHKLPPVA Trigger: AGCCACGGGTGGAAGTTTATGCCTGTAATACCAGCACTTAGGATTGGCAGCAGGAGGATCAGAGAAGGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR CCA 72 bp | ACCTTCTCTGATCCTCCTGCTGCCAATCCTAAGTGCTaGTATTACAGGCATAAACTTCCACCCGTGGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TFSDPPAANPKC*YYRHKLPPVAS Trigger: TGAAGCCACGGGTGGAAGTTTATGCCTGTAATACCAGCACTTAGGATTGGCAGCAGGAGGATCAGAGAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR CCA 72 bp | TCTGGCCAGTGTTTGACAAAACACCAGAAAGCCAACTaGAACACGTTCAAAGTGTACACTGGGACAATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SGQCLTKHQKAN*NTFKVYTGTIP Trigger: TGGGATTGTCCCAGTGTACACTTTGAACGTGTTCCAGTTGGCTTTCTGGTGTTTTGTCAAACACTGGCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR CCA 72 bp | AGCACAACCACCTCCATCTACTCAGATTTTTGCTGGTaGCCTAGAAACCCACTAAAAACCCTGTATGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: STTTSIYSDFCW*PRNPLKTLYGC Trigger: ACAGCCATACAGGGTTTTTAGTGGGTTTCTAGGCCACCAGCAAAAATCTGAGTAGATGGAGGTGGTTGTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR CCA 72 bp | ACAAGCACAACCACCTCCATCTACTCAGATTTTTGCTaGTGGCCTAGAAACCCACTAAAAACCCTGTATGGC | + |
|
Preference number: 3 (lower is better) Translates to: TSTTTSIYSDFC*WPRNPLKTLYG Trigger: GCCATACAGGGTTTTTAGTGGGTTTCTAGGCCACCAGCAAAAATCTGAGTAGATGGAGGTGGTTGTGCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR CCA 72 bp | ACAAGGAACCCGAACCCCAAGGGTCAGAGTGTTTGCTaGTTTTCTGATCTACTAGTATGGGATTTGAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: TRNPNPKGQSVC*FSDLLVWDLRT Trigger: TGTCCTCAAATCCCATACTAGTAGATCAGAAAACCAGCAAACACTCTGACCCTTGGGGTTCGGGTTCCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGTTGTAGTTTAGAAAGCAAGCAGGAAAAGCACGGTGCTGAAGTGTTTATTTCTCAGGCTGTTGACTaGACCTTCTCTGATCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LGCSLESKQEKHGAEVFISQAVD*TFSDPP Trigger: AGGAGGATCAGAGAAGGTCAAGTCAACAGCCTGAGA...AATAAACACTTCAGCACCGTGCTTTTCCTGCTTGCTTTCTAAACTACAACCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCCTGTGAATGGAATCTTCTACCACCAGGTCAAGCAGTCTCCGCGATTTCTATCATCTCACTAGACTaGCACCTGTCTCCTTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: FSCEWNLLPPGQAVSAISIISLD*HLSPSL Trigger: TAAGGAAGGAGACAGGTGCAAGTCTAGTGAGATGAT...AGAAATCGCGGAGACTGCTTGACCTGGTGGTAGAAGATTCCATTCACAGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR TCA 72 bp | TCAGAGAAGGAAAGAAAGATCCTACCCTGGGCAGTTTaGGCTCACGATGGATCTTCCTTTGAAATAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SEKERKILPWAV*AHDGSSFEIAA Trigger: TGCTGCTATTTCAAAGGAAGATCCATCGTGAGCTCAAACTGCCCAGGGTAGGATCTTTCTTTCCTTCTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR GCA 72 bp | ATCAAAATCGGTACATTCCAGAAACTTCACTCACACTaGTGGCTAACGCTTGCACTACTGTTGGGACTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: IKIGTFQKLHSH*WLTLALLLGLP Trigger: TGGAAGTCCCAACAGTAGTGCAAGCGTTAGCCAGCAGTGTGAGTGAAGTTTCTGGAATGTACCGATTTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR CCA 72 bp | AGCTTACAGTTCGTACTGTTTCTACTGTCACCTTTATaGAACCCAGAGTCACCTGGCAAGAGGGACTATCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLQFVLFLLSPL*NPESPGKRDYQ Trigger: TTGATAGTCCCTCTTGCCAGGTGACTCTGGGTTCCATAAAGGTGACAGTAGAAACAGTACGAACTGTAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTTGTTTTACGGAGACAGGGTCTCAAATATCTCAGGCTGTTGACTTGACCTTCGTCAAGTCCTCAAGTTaGAATGATGAACACACACCT | + |
|
Preference number: 3 (lower is better) Translates to: ACFTETGSQISQAVDLTFVKSSS*NDEHTP Trigger: AGGTGTGTGTTCATCATTCAAACTTGAGGACTTGAC...GAAGGTCAAGTCAACAGCCTGAGATATTTGAGACCCTGTCTCCGTAAAACAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR TCA 72 bp | AAGCCCTTGACTCTATTGAATTTCTTCAGCAGCCAATaGATCCTGGATCCATACAAAAATATATTTAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KPLTLLNFFSSQ*ILDPYKNIFSF Trigger: GAAGCTAAATATATTTTTGTATGGATCCAGGATTCATTGGCTGCTGAAGAAATTCAATAGAGTCAAGGGCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR TCA 72 bp | AGCTGTGAAGGTCGATTTAGCTGTTCAGAAAATGGCTaGAATAATTATAAACCTGAAAGCTACTTTTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: SCEGRFSCSENG*NNYKPESYFCT Trigger: AGTGCAAAAGTAGCTTTCAGGTTTATAATTATTTCAGCCATTTTCTGAACAGCTAAATCGACCTTCACAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR CCA 72 bp | GGTCAGAGTGTTTGCTGGTTTTCTGATCTACTAGTATaGGATTTGAGGACAAATCATGTAAAAATCTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: GQSVCWFSDLLV*DLRTNHVKISK Trigger: TTTAGAGATTTTTACATGATTTGTCCTCAAATCCCATACTAGTAGATCAGAAAACCAGCAAACACTCTGACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR CCA 72 bp | CATACAAAAATATATTTAGCTTCCACCTGCAAAAAGTaGCCATTTGATTATCATCTCACTAGACTTGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: HTKIYLASTCKK*PFDYHLTRLAP Trigger: AGGTGCAAGTCTAGTGAGATGATAATCAAATGGCCACTTTTTGCAGGTGGAAGCTAAATATATTTTTGTATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| CDS-3UTR TCA 90 bp | GTGCACCACTCCTACGGTGTGAAGGGGCACGCCTCCAGGATCAGGTCCGGCAGGCTTGGTGGCAGCTCGTaGAGGGGCGAGGCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VHHSYGVKGHASRIRSGRLGGSS*RGEAKN Trigger: ATTCTTGGCCTCGCCCCTTCACGAGCTGCCACCAAG...CCTGCCGGACCTGATCCTGGAGGCGTGCCCCTTCACACCGTAGGAGTGGTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| CDS-3UTR CCA 90 bp | GTGCACCACTCCTACGGTGTGAAGGGGCACGCCTCCAGGATCAGGTCCGGCAGGCTTCCCAGACGGAGGTaGTGGGCCAAGAAATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VHHSYGVKGHASRIRSGRLPRRR*WAKKST Trigger: GGTGGATTTCTTGGCCCACCACCTCCGTCTGGGAAG...CCTGCCGGACCTGATCCTGGAGGCGTGCCCCTTCACACCGTAGGAGTGGTGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR CAA 72 bp | CGCCTCCAGGATCAGGTCCGGCAGGAATCTGGTGTGTaGGTGGAGGACACCCCCTGGCATAACCATGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLQDQVRQESGV*VEDTPWHNHAL Trigger: CAGGGCATGGTTATGCCAGGGGGTGTCCTCCACCAACACACCAGATTCCTGCCGGACCTGATCCTGGAGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| CDS-3UTR GCA 90 bp | GTGCACCACTCCTACGGTGTGAAGGGGCACGCCTCCAGGATCAGGTCCGGCAGGAGAAATCCACCAGCCTaGTTGGTGGCAGCTCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VHHSYGVKGHASRIRSGRRNPPA*LVAARE Trigger: TTCACGAGCTGCCACCAAGCAGGCTGGTGGATTTCT...CCTGCCGGACCTGATCCTGGAGGCGTGCCCCTTCACACCGTAGGAGTGGTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| CDS-3UTR TCA 90 bp | TTCAGTGCACCACTCCTACGGTGTGAAGGGGCACGCCTCCAGGATCAGGTCCGGGGATATACAGGAAGATaGAGGAGCAGTCCGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSAPLLRCEGARLQDQVRGYTGR*RSSPWC Trigger: ACACCACGGACTGCTCCTTCATCTTCCTGTATATCC...CCGGACCTGATCCTGGAGGCGTGCCCCTTCACACCGTAGGAGTGGTGCACTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACAGGACTTCATCTGCTCCCCAGAAGGACTACTGCAGCACCAGCCTGCTTGGTaGCAGCTCGTGAAGGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTQDFICSPEGLLQHQPAW*QLVKGR Trigger: TCGCCCCTTCACGAGCTGCCACCAAGCAGGCTGGTG...CTGCAGTAGTCCTTCTGGGGAGCAGATGAAGTCCTGTGTGTGTGTGTGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACAGGACTTCATCTGCTCCCCAGAAGGACTACTGCAGAGTGAAGGGGAGCTTTaGCACCACTCTACCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTQDFICSPEGLLQSEGEL*HHSTIK Trigger: TTTGATGGTAGAGTGGTGGCAAAGCTCCCCTTCACT...CTGCAGTAGTCCTTCTGGGGAGCAGATGAAGTCCTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| CDS-3UTR CCA 90 bp | TGGCCATTTGATTATCATCTCACTAGACTTGCACCTGTCTCCTTCCTTACAGTGATCCACCAGCCTGCTTaGTGGCAGCTCGTGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WPFDYHLTRLAPVSFLTVIHQPA*WQLVKG Trigger: CCCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGAT...CACTGTAAGGAAGGAGACAGGTGCAAGTCTAGTGAGATGATAATCAAATGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR CAA 72 bp | TGTTCGCTCCTCCCACCATGGGTCAAGTCCTCAAGTTaGAATGATGAACACACACCTGTCCCTGGAGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSLLPPWVKSSS*NDEHTPVPGDL Trigger: AAGGTCTCCAGGGACAGGTGTGTGTTCATCATTCAAACTTGAGGACTTGACCCATGGTGGGAGGAGCGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| CDS-3UTR TCA 90 bp | TGTGTATGCCCATGGGTAAGTGTGTGGTTCTCCCCATCCATAGTTCCTGTTCTATGTAAGACAGAGGAGTaGAGGGGAGCTTTGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CVCPWVSVWFSPSIVPVLCKTEE*RGALPP Trigger: TGGTGGCAAAGCTCCCCTTCACTCCTCTGTCTTACA...TAGAACAGGAACTATGGATGGGGAGAACCACACACTTACCCATGGGCATACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| CDS-3UTR CCA 90 bp | CAGTCTGCTTCTGTGTATATGGCACATACACTGAAATACTCAAGTGAGACAAGACACCAGCCTGCTTGGTaGCAGCTCGTGAAGGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QSASVYMAHTLKYSSETRHQPAW*QLVKGR Trigger: TCGCCCCTTCACGAGCTGCCACCAAGCAGGCTGGTG...TCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCATATACACAGAAGCAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CCA 90 bp | CTGGGTTGTAGTTTAGAAAGCAAGCAGGAAAAGCACGGTGCTGAAGTGTTTATTCCCAGACGGAGGTGGTaGGCCAAGAAATCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGCSLESKQEKHGAEVFIPRRRW*AKKSTS Trigger: GCTGGTGGATTTCTTGGCCCACCACCTCCGTCTGGG...AATAAACACTTCAGCACCGTGCTTTTCCTGCTTGCTTTCTAAACTACAACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| 3UTR CAA 72 bp | ACGGAGACAGGGTCTCAAATATCTCAGGCTGTTGACTaGACCTTCTCTGATCCTCCTGCTGCCAATCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TETGSQISQAVD*TFSDPPAANPK Trigger: CTTAGGATTGGCAGCAGGAGGATCAGAGAAGGTCAAGTCAACAGCCTGAGATATTTGAGACCCTGTCTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| CDS-3UTR TCA 90 bp | TTTTCTCCTAATGTTCATGGACAGTCTGCTTCTGTGTATATGGCACATACACTGCTTGGTGGCAGCTCGTaGAGGGGCGAGGCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSPNVHGQSASVYMAHTLLGGSS*RGEAKN Trigger: ATTCTTGGCCTCGCCCCTTCACGAGCTGCCACCAAG...CAGTGTATGTGCCATATACACAGAAGCAGACTGTCCATGAACATTAGGAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CCA 90 bp | CAGTCTGCTTCTGTGTATATGGCACATACACTGAAATACTCAAGTGAGACAAGACCCAGACGGAGGTGGTaGGCCAAGAAATCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSASVYMAHTLKYSSETRPRRRW*AKKSTS Trigger: GCTGGTGGATTTCTTGGCCCACCACCTCCGTCTGGG...TCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCATATACACAGAAGCAGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCTCCTAATGTTCATGGACAGTCTGCTTCTGTGTATATGGCACATACACCTTGGTGGCAGCTCGTaGAGGGGCGAGGCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IFLLMFMDSLLLCIWHIHLGGSS*RGEAKN Trigger: ATTCTTGGCCTCGCCCCTTCACGAGCTGCCACCAAG...GTGTATGTGCCATATACACAGAAGCAGACTGTCCATGAACATTAGGAGAAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CCA 90 bp | GCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTGTGGTTACACACCAGCCTGCTTGGTaGCAGCTCGTGAAGGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: AHTLKYSSETRKMMFVVTHQPAW*QLVKGR Trigger: TCGCCCCTTCACGAGCTGCCACCAAGCAGGCTGGTG...TGTAACCACAAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CCA 90 bp | ATCCGTGACCATAGCACTATCCCATTAGTTAAGCAGTGTTCTCATTTGATCATAATCCACCAGCCTGCTTaGTGGCAGCTCGTGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IRDHSTIPLVKQCSHLIIIHQPA*WQLVKG Trigger: CCCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGAT...TATGATCAAATGAGAACACTGCTTAACTAATGGGATAGTGCTATGGTCACGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CCA 90 bp | TCTGCTTCTGTGTATATGGCACATACACTGAAATACTCAAGTGAGACAAGAAAGCCCAGACGGAGGTGGTaGGCCAAGAAATCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SASVYMAHTLKYSSETRKPRRRW*AKKSTS Trigger: GCTGGTGGATTTCTTGGCCCACCACCTCCGTCTGGG...CTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCATATACACAGAAGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR TCA 90 bp | GCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTGTGGTTACACTTGGTGGCAGCTCGTaGAGGGGCGAGGCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AHTLKYSSETRKMMFVVTLGGSS*RGEAKN Trigger: ATTCTTGGCCTCGCCCCTTCACGAGCTGCCACCAAG...TGTAACCACAAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CCA 90 bp | GTGTATATGGCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTCACCAGCCTGCTTGGTaGCAGCTCGTGAAGGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VYMAHTLKYSSETRKMMFHQPAW*QLVKGR Trigger: TCGCCCCTTCACGAGCTGCCACCAAGCAGGCTGGTG...AAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCATATACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CCA 90 bp | ATGGCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTGTGGTTATCCACCAGCCTGCTTaGTGGCAGCTCGTGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MAHTLKYSSETRKMMFVVIHQPA*WQLVKG Trigger: CCCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGAT...AACCACAAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CCA 90 bp | TCTGCTTCTGTGTATATGGCACATACACTGAAATACTCAAGTGAGACAAGAAAGCTTCCCAGACGGAGGTaGTGGGCCAAGAAATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SASVYMAHTLKYSSETRKLPRRR*WAKKST Trigger: GGTGGATTTCTTGGCCCACCACCTCCGTCTGGGAAG...CTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCATATACACAGAAGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR TCA 90 bp | GCTTGTTTTACGGAGACAGGGTCTCAAATATCTCAGGCTGTTGACTTGACCTTCCTGTTGTCGACCAGCTaGCTCTGTTATAGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ACFTETGSQISQAVDLTFLLSTS*LCYSFL Trigger: AAGGAAACTATAACAGAGTCAGCTGGTCGACAACAG...GAAGGTCAAGTCAACAGCCTGAGATATTTGAGACCCTGTCTCCGTAAAACAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| CDS-3UTR TCA 90 bp | CAGTCTGCTTCTGTGTATATGGCACATACACTGAAATACTCAAGTGAGACAAGACCCAGCAGGTTCCGATaGGATAGTCCATTGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSASVYMAHTLKYSSETRPSRFR*DSPLTG Trigger: ACCTGTCAATGGACTATCTCATCGGAACCTGCTGGG...TCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCATATACACAGAAGCAGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193101.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCTCCTAATGTTCATGGACAGTCTGCTTCTGTGTATATGGCACATACACTGAGAAATCCACCAGCCTaGTTGGTGGCAGCTCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSPNVHGQSASVYMAHTLRNPPA*LVAARE Trigger: TTCACGAGCTGCCACCAAGCAGGCTGGTGGATTTCT...CAGTGTATGTGCCATATACACAGAAGCAGACTGTCCATGAACATTAGGAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CCA 90 bp | GTGTATATGGCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTATCCACCAGCCTGCTTaGTGGCAGCTCGTGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VYMAHTLKYSSETRKMMFIHQPA*WQLVKG Trigger: CCCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGAT...AAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCATATACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CCA 90 bp | GTGTATATGGCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTCCCAGACGGAGGTGGTaGGCCAAGAAATCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VYMAHTLKYSSETRKMMFPRRRW*AKKSTS Trigger: GCTGGTGGATTTCTTGGCCCACCACCTCCGTCTGGG...AAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCATATACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CCA 90 bp | GCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTGTGGTTACACTTCCCAGACGGAGGTaGTGGGCCAAGAAATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AHTLKYSSETRKMMFVVTLPRRR*WAKKST Trigger: GGTGGATTTCTTGGCCCACCACCTCCGTCTGGGAAG...TGTAACCACAAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CCA 90 bp | ATGGCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTGTGGTTCTTCCCAGACGGAGGTaGTGGGCCAAGAAATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: MAHTLKYSSETRKMMFVVLPRRR*WAKKST Trigger: GGTGGATTTCTTGGCCCACCACCTCCGTCTGGGAAG...AACCACAAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| 3UTR CAA 72 bp | GCAAAAAGTGGCCATTTGATTATCATCTCACTAGACTaGCACCTGTCTCCTTCCTTACAGTGTGGCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: AKSGHLIIISLD*HLSPSLQCGNS Trigger: ACTGTTGCCACACTGTAAGGAAGGAGACAGGTGCAAGTCTAGTGAGATGATAATCAAATGGCCACTTTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| CDS-3UTR TCA 90 bp | ATGGCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTGTGGTTTGTAAGACAGAGGAGTaGAGGGGAGCTTTGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: MAHTLKYSSETRKMMFVVCKTEE*RGALPP Trigger: TGGTGGCAAAGCTCCCCTTCACTCCTCTGTCTTACA...AACCACAAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CCA 90 bp | GCTTGTTTTACGGAGACAGGGTCTCAAATATCTCAGGCTGTTGACTTGACCTTCAGGCCAAGAATCTTCTaGATGTTTTGTCGAATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ACFTETGSQISQAVDLTFRPRIF*MFCRID Trigger: GTCAATTCGACAAAACATCCAGAAGATTCTTGGCCT...GAAGGTCAAGTCAACAGCCTGAGATATTTGAGACCCTGTCTCCGTAAAACAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| CDS-3UTR TCA 90 bp | TTTTCTCCTAATGTTCATGGACAGTCTGCTTCTGTGTATATGGCACATACACTGCTGTTGTCGACCAGCTaGCTCTGTTATAGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSPNVHGQSASVYMAHTLLLSTS*LCYSFL Trigger: AAGGAAACTATAACAGAGTCAGCTGGTCGACAACAG...CAGTGTATGTGCCATATACACAGAAGCAGACTGTCCATGAACATTAGGAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR GCA 90 bp | GTGTATATGGCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTAGAAATCCACCAGCCTaGTTGGTGGCAGCTCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VYMAHTLKYSSETRKMMFRNPPA*LVAARE Trigger: TTCACGAGCTGCCACCAAGCAGGCTGGTGGATTTCT...AAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCATATACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CCA 90 bp | TTCTACCACCAGGTCAAGCAGTCTCCGCGATTTCTTAGCTCTCTTCATAAGACATTTGTCGAATTGACATaGTACAGAGGATATACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FYHQVKQSPRFLSSLHKTFVELT*YRGYTG Trigger: TCCTGTATATCCTCTGTACCATGTCAATTCGACAAA...TGTCTTATGAAGAGAGCTAAGAAATCGCGGAGACTGCTTGACCTGGTGGTAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
||
| CDS-3UTR TCA 90 bp | GTGTATATGGCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTGGATATACAGGAAGATaGAGGAGCAGTCCGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VYMAHTLKYSSETRKMMFGYTGR*RSSPWC Trigger: ACACCACGGACTGCTCCTTCATCTTCCTGTATATCC...AAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCATATACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR GCA 90 bp | TATTTTTCTCCTAATGTTCATGGACAGTCTGCTTCTGTGTATATGGCACATACAAGTGAAGGGGAGCTTTaGCACCACTCTACCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNVHGQSASVYMAHTSEGEL*HHSTIK Trigger: TTTGATGGTAGAGTGGTGGCAAAGCTCCCCTTCACT...TGTATGTGCCATATACACAGAAGCAGACTGTCCATGAACATTAGGAGAAAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR TCA 90 bp | TATTTTTCTCCTAATGTTCATGGACAGTCTGCTTCTGTGTATATGGCACATACACTGTTGTCGACCAGCTaGCTCTGTTATAGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNVHGQSASVYMAHTLLSTS*LCYSFL Trigger: AAGGAAACTATAACAGAGTCAGCTGGTCGACAACAG...TGTATGTGCCATATACACAGAAGCAGACTGTCCATGAACATTAGGAGAAAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CCA 90 bp | TTTTCTCCTAATGTTCATGGACAGTCTGCTTCTGTGTATATGGCACATACACTGTTTGTCGAATTGACATaGTACAGAGGATATACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSPNVHGQSASVYMAHTLFVELT*YRGYTG Trigger: TCCTGTATATCCTCTGTACCATGTCAATTCGACAAA...CAGTGTATGTGCCATATACACAGAAGCAGACTGTCCATGAACATTAGGAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
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| CDS-3UTR CCA 90 bp | GCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTGTGGTTACATTTGTCGAATTGACATaGTACAGAGGATATACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHTLKYSSETRKMMFVVTFVELT*YRGYTG Trigger: TCCTGTATATCCTCTGTACCATGTCAATTCGACAAA...TGTAACCACAAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
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| CDS-3UTR GCA 90 bp | ATGGCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTGTGGTTGGAAATTCAGAATTCTaGTTTCCTTCAGGAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: MAHTLKYSSETRKMMFVVGNSEF*FPSGKL Trigger: AAGTTTTCCTGAAGGAAAGCAGAATTCTGAATTTCC...AACCACAAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193101.2 |
||
| CDS-3UTR CCA 90 bp | GTGTATATGGCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTTTTGTCGAATTGACATaGTACAGAGGATATACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VYMAHTLKYSSETRKMMFFVELT*YRGYTG Trigger: TCCTGTATATCCTCTGTACCATGTCAATTCGACAAA...AAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCATATACAC 36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
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| CDS TCA 90 bp | TGTAAACCAGGACCCAGGTTATGCCCTCGAGGAGCGCTACAACTTTaGCAGCCCCGAGTCTACACTTCCGCTTCCGGGGCGCCGACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CKPGPRLCPRGALQL*QPRVYTSASGAPTR Trigger: CCGGGTCGGCGCCCCGGAAGCGGAAGTGTAGACTCGGGGCTGTCAAAGTTGTAGCGCTCCTCGAGGGCATAACCTGGGTCCTGGTTTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193446.6 |
||
| CDS GCA 90 bp | GAAAACTTCCCAGACGGAGGTGGTGGGCCAAGAAATCCACCAGCCTaGTTGGTGGCAGCTCGTGAAGGGGCGAGGCCAAGAATCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ENFPDGGGGPRNPPA*LVAAREGARPRIFW Trigger: CCAGAAGATTCTTGGCCTCGCCCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGATTTCTTGGCCCACCACCTCCGTCTGGGAAGTTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097473.10 ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
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| CDS CCA 90 bp | ACTTCCCAGACGGAGGTGGTGGGCCAAGAAATCCACCAGCCTGCTTaGTGGCAGCTCGTGAAGGGGCGAGGCCAAGAATCTTCTGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: TSQTEVVGQEIHQPA*WQLVKGRGQESSGC Trigger: ACATCCAGAAGATTCTTGGCCTCGCCCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGATTTCTTGGCCCACCACCTCCGTCTGGGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097473.10 ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
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| CDS CCA 90 bp | TCCCAGACGGAGGTGGTGGGCCAAGAAATCCACCAGCCTGCTTGGTaGCAGCTCGTGAAGGGGCGAGGCCAAGAATCTTCTGGATGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SQTEVVGQEIHQPAW*QLVKGRGQESSGCF Trigger: AAAACATCCAGAAGATTCTTGGCCTCGCCCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGATTTCTTGGCCCACCACCTCCGTCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097473.10 ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
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| CDS-3UTR CAA 90 bp | TTTTCCTGTGAATGGAATCTTCTACCACCAGGTCAAGCAGTCTCCGCGATTTCTAATCCACCAGCCTGCTaGGTGGCAGCTCGTGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSCEWNLLPPGQAVSAISNPPAC*VAAREG Trigger: CCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGATT...AGAAATCGCGGAGACTGCTTGACCTGGTGGTAGAAGATTCCATTCACAGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097473.10 |
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| CDS TCA 90 bp | GGATGTTTTGTCGAATTGACATGGTACAGAGGATATACAGGAAGATaGAGGAGCAGTCCGTGGTGTCATCTCCCAGCAGGTTCCGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: GCFVELTWYRGYTGR*RSSPWCHLPAGSDE Trigger: CTCATCGGAACCTGCTGGGAGATGACACCACGGACTGCTCCTTCATCTTCCTGTATATCCTCTGTACCATGTCAATTCGACAAAACATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097473.10 ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
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| CDS-3UTR CAA 90 bp | CAGTCTGCTTCTGTGTATATGGCACATACACTGAAATACTCAAGTGAGACAAGAAATCCACCAGCCTGCTaGGTGGCAGCTCGTGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QSASVYMAHTLKYSSETRNPPAC*VAAREG Trigger: CCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGATT...TCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCATATACACAGAAGCAGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
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| CDS-3UTR CAA 90 bp | TATTTTTCTCCTAATGTTCATGGACAGTCTGCTTCTGTGTATATGGCACATACAAATCCACCAGCCTGCTaGGTGGCAGCTCGTGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: YFSPNVHGQSASVYMAHTNPPAC*VAAREG Trigger: CCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGATT...TGTATGTGCCATATACACAGAAGCAGACTGTCCATGAACATTAGGAGAAAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS-3UTR CAA 90 bp | ATGGCACATACACTGAAATACTCAAGTGAGACAAGAAAGATGATGTTTGTGGTTAATCCACCAGCCTGCTaGGTGGCAGCTCGTGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: MAHTLKYSSETRKMMFVVNPPAC*VAAREG Trigger: CCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGATT...AACCACAAACATCATCTTTCTTGTCTCACTTGAGTATTTCAGTGTATGTGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
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| CDS TCA 90 bp | AAGATGAAGGAGCAGTCCGTGGTGTCATCTCCCAGCAGGTTCCGATaGGATAGTCCATTGACAGGTCTCTATTGTTGTTCTTTAATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KMKEQSVVSSPSRFR*DSPLTGLYCCSLIS Trigger: AGAAATTAAAGAACAACAATAGAGACCTGTCAATGGACTATCTCATCGGAACCTGCTGGGAGATGACACCACGGACTGCTCCTTCATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193101.2 |
||
| CDS GCA 72 bp | CCAGACGGAGGTGGTGGGCCAAGAAATCCACCAGCCTaGTTGGTGGCAGCTCGTGAAGGGGCGAGGCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PDGGGGPRNPPA*LVAAREGARPR Trigger: TCTTGGCCTCGCCCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGATTTCTTGGCCCACCACCTCCGTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097473.10 ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
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| CDS CAA 72 bp | GACGGAGGTGGTGGGCCAAGAAATCCACCAGCCTGCTaGGTGGCAGCTCGTGAAGGGGCGAGGCCAAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: DGGGGPRNPPAC*VAAREGARPRI Trigger: GATTCTTGGCCTCGCCCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGATTTCTTGGCCCACCACCTCCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097473.10 ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
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| CDS CCA 72 bp | ACGGAGGTGGTGGGCCAAGAAATCCACCAGCCTGCTTaGTGGCAGCTCGTGAAGGGGCGAGGCCAAGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: TEVVGQEIHQPA*WQLVKGRGQES Trigger: AGATTCTTGGCCTCGCCCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGATTTCTTGGCCCACCACCTCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097473.10 ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS CAA 72 bp | AGGACCCAGGTTATGCCCTCGAGGAGCGCTACAACTTaGACAGCCCCGAGTCTACACTTCCGCTTCCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RTQVMPSRSATT*TAPSLHFRFRG Trigger: GCCCCGGAAGCGGAAGTGTAGACTCGGGGCTGTCAAAGTTGTAGCGCTCCTCGAGGGCATAACCTGGGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193446.6 |
||
| CDS CCA 72 bp | GAGGTGGTGGGCCAAGAAATCCACCAGCCTGCTTGGTaGCAGCTCGTGAAGGGGCGAGGCCAAGAATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EVVGQEIHQPAW*QLVKGRGQESS Trigger: AGAAGATTCTTGGCCTCGCCCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGATTTCTTGGCCCACCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097473.10 ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS CAA 90 bp | AACTTCCCAGACGGAGGTGGTGGGCCAAGAAATCCACCAGCCTGCTaGGTGGCAGCTCGTGAAGGGGCGAGGCCAAGAATCTTCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: NFPDGGGGPRNPPAC*VAAREGARPRIFWM Trigger: CATCCAGAAGATTCTTGGCCTCGCCCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGATTTCTTGGCCCACCACCTCCGTCTGGGAAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097473.10 ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS CCA 72 bp | TGCTTTCCTTCAGGAAAACTTCCCAGACGGAGGTGGTaGGCCAAGAAATCCACCAGCCTGCTTGGTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CFPSGKLPRRRW*AKKSTSLLGGS Trigger: GCTGCCACCAAGCAGGCTGGTGGATTTCTTGGCCCACCACCTCCGTCTGGGAAGTTTTCCTGAAGGAAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193101.2 |
||
| CDS TCA 72 bp | GCCAAGAAATCCACCAGCCTGCTTGGTGGCAGCTCGTaGAGGGGCGAGGCCAAGAATCTTCTGGATGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: AKKSTSLLGGSS*RGEAKNLLDVL Trigger: CAAAACATCCAGAAGATTCTTGGCCTCGCCCCTTCACGAGCTGCCACCAAGCAGGCTGGTGGATTTCTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097473.10 ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS CCA 72 bp | TTCTGCTTTCCTTCAGGAAAACTTCCCAGACGGAGGTaGTGGGCCAAGAAATCCACCAGCCTGCTTGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FCFPSGKLPRRR*WAKKSTSLLGG Trigger: GCCACCAAGCAGGCTGGTGGATTTCTTGGCCCACCACCTCCGTCTGGGAAGTTTTCCTGAAGGAAAGCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193101.2 |
||
| CDS TCA 72 bp | GAGCAGTCCGTGGTGTCATCTCCCAGCAGGTTCCGATaGGATAGTCCATTGACAGGTCTCTATTGTTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EQSVVSSPSRFR*DSPLTGLYCCS Trigger: AGAACAACAATAGAGACCTGTCAATGGACTATCTCATCGGAACCTGCTGGGAGATGACACCACGGACTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193101.2 |
||
| CDS CCA 72 bp | GTGGCAGCTCGTGAAGGGGCGAGGCCAAGAATCTTCTaGATGTTTTGTCGAATTGACATGGTACAGAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: VAAREGARPRIF*MFCRIDMVQRI Trigger: TATCCTCTGTACCATGTCAATTCGACAAAACATCCAGAAGATTCTTGGCCTCGCCCCTTCACGAGCTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097473.10 ENSMUST00000193101.2 ENSMUST00000193446.6 ENSMUST00000195015.6 |
||
| CDS TCA 72 bp | TCCGATGAGATAGTCCTTGGATGTAAGACAGAGGAGTaGAGGGGAGCTTTGCCACCACTCTACCATCAAATA | + |
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Preference number: 6 (lower is better) Translates to: SDEIVLGCKTEE*RGALPPLYHQI Trigger: TATTTGATGGTAGAGTGGTGGCAAAGCTCCCCTTCACTCCTCTGTCTTACATCCAAGGACTATCTCATCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097473.10 ENSMUST00000193446.6 ENSMUST00000195015.6 |
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| CDS CAA 72 bp | AAAAGCCAATCGCGAACATGGATTTCATCCGTACCATaGACAGGTCTCTATTGTTGTTCTTTAATTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: KSQSRTWISSVP*TGLYCCSLISL Trigger: AAGAGAAATTAAAGAACAACAATAGAGACCTGTCAATGGTACGGATGAAATCCATGTTCGCGATTGGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097473.10 ENSMUST00000193446.6 ENSMUST00000195015.6 |
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