Pregenerated sensors for TMCC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020023Ensembl transcript IDs: ENSMUST00000065060.12, ENSMUST00000117460.8, ENSMUST00000117929.2, ENSMUST00000121471.8, ENSMUST00000132743.3, ENSMUST00000148823.3, ENSMUST00000148910.3
Found 365 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCATTCACGGGCATCCCAGGCCCTGGCACGCCCTAAGTGCCACTTaGAAATATTCACAGATAGGAATGGGAGCCCAGCAGAGCCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: GIHGHPRPWHALSAT*KYSQIGMGAQQSPA Trigger: AGCTGGGCTCTGCTGGGCTCCCATTCCTATCTGTGAATATTTCCAAGTGGCACTTAGGGCGTGCCAGGGCCTGGGATGCCCGTGAATGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| 3UTR TCA 90 bp | AGAGTGGTCCGGTTAGGCAGTGTAGGGGTGGGGCAGGTGCTGGCGTaGGAACAGAACCTCTTCCCAGATTCTCTCAGAGCCCTAGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: RVVRLGSVGVGQVLA*EQNLFPDSLRALAK Trigger: CTTAGCTAGGGCTCTGAGAGAATCTGGGAAGAGGTTCTGTTCTCACGCCAGCACCTGCCCCACCCCTACACTGCCTAACCGGACCACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| 3UTR GCA 90 bp | TGGAAATATTCACAGATAGGAATGGGAGCCCAGCAGAGCCCAGCTTaGTTCAGGGTACAGGCAGATGGAGTCTGGGGCCTACAGGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: WKYSQIGMGAQQSPA*FRVQADGVWGLQVR Trigger: CCTTACCTGTAGGCCCCAGACTCCATCTGCCTGTACCCTGAAGCAAGCTGGGCTCTGCTGGGCTCCCATTCCTATCTGTGAATATTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| 3UTR GCA 90 bp | CATTTATCACAGTTAACAGTCGCCTACGCACTGCCTCCCCAGGGATaGTCGCAGGACCCTGAGTTACCCAAGCTACAGTTTGACAACAGC | + |
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Preference number: 1 (lower is better) Translates to: HLSQLTVAYALPPQG*SQDPELPKLQFDNS Trigger: GCTGTTGTCAAACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTGCGTAGGCGACTGTTAACTGTGATAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| 3UTR TCA 90 bp | CAGCTCTTGCAGGCTCTCTGCTCATGGGGCAGTGCATTTCTCCTGTaGCCTCAGAGCTTATCTGTGTACCTAAGAGACAGACAGCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: QLLQALCSWGSAFLL*PQSLSVYLRDRQQQ Trigger: TTGCTGCTGTCTGTCTCTTAGGTACACAGATAAGCTCTGAGGTCACAGGAGAAATGCACTGCCCCATGAGCAGAGAGCCTGCAAGAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR CCA 90 bp | CTCTCCTCTTGGTGGCGTACACAGAAAACCAGGTTTGTCAGTAAATaGCAGCCATCGAACAAGACACAGCAGCTCTTGCAGGCTCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: LSSWWRTQKTRFVSK*QPSNKTQQLLQALC Trigger: GCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCATTTACTGACAAACCTGGTTTTCTGTGTACGCCACCAAGAGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR GCA 90 bp | GAACAAGACACAGCAGCTCTTGCAGGCTCTCTGCTCATGGGGCAGTaGATTTCTCCTGTGACCTCAGAGCTTATCTGTGTACCTAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: EQDTAALAGSLLMGQ*ISPVTSELICVPKR Trigger: TCTCTTAGGTACACAGATAAGCTCTGAGGTCACAGGAGAAATGCACTGCCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR GCA 90 bp | CTTAATTTTATTCCTGATGGCCTTTGCGTCCCTAAGGGACCCTCCTaGTCTCATCTGGGTCAAGAGCTCCCACTACTCTTGCCACCATTT | + |
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Preference number: 1 (lower is better) Translates to: LNFIPDGLCVPKGPS*SHLGQELPLLLPPF Trigger: AAATGGTGGCAAGAGTAGTGGGAGCTCTTGACCCAGATGAGAGCAGGAGGGTCCCTTAGGGACGCAAAGGCCATCAGGAATAAAATTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| 3UTR GCA 90 bp | CTCTCAACACGAGGGATGCACGAGATGTCTACTCCCAACATAAAGTaGAAAACAAGATGCGCTGACTCAATTACAAATCGATTCCAATTC | + |
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Preference number: 1 (lower is better) Translates to: LSTRGMHEMSTPNIK*KTRCADSITNRFQF Trigger: GAATTGGAATCGATTTGTAATTGAGTCAGCGCATCTTGTTTTGCACTTTATGTTGGGAGTAGACATCTCGTGCATCCCTCGTGTTGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| 3UTR TCA 90 bp | CTATACACTCTTGCTAAAAATATCAAAAGCTTCACAAACTTTCCGTaGGACCGAAACAAGTATGCCATAGAGCTGCACATGCCCAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: LYTLAKNIKSFTNFP*DRNKYAIELHMPRQ Trigger: TTGCCTGGGCATGTGCAGCTCTATGGCATACTTGTTTCGGTCTCACGGAAAGTTTGTGAAGCTTTTGATATTTTTAGCAAGAGTGTATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| 3UTR CAA 90 bp | CGGCATTCACGGGCATCCCAGGCCCTGGCACGCCCTAAGTGCCACTaGGAAATATTCACAGATAGGAATGGGAGCCCAGCAGAGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: RHSRASQALARPKCH*EIFTDRNGSPAEPS Trigger: GCTGGGCTCTGCTGGGCTCCCATTCCTATCTGTGAATATTTCCAAGTGGCACTTAGGGCGTGCCAGGGCCTGGGATGCCCGTGAATGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| 3UTR-3UTR GCA 90 bp | ATGGCAGCCATCGAACAAGACACAGCAGCTCTTGCAGGCTCTCTGCTCATGGGGCTGCCTCCCCAGGGATaGTCGCAGGACCCTGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: MAAIEQDTAALAGSLLMGLPPQG*SQDPEL Trigger: TAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAG...CCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCCGTGTAGGAACAAAGCCATAGATAGGGGTGGTACTGGGAACTTCCCCATCAGGCCCCCAGTGTCCTaGCTCAGCACACACACACAC | + |
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Preference number: 2 (lower is better) Translates to: LPCRNKAIDRGGTGNFPIRPPVS*LSTHTH Trigger: GTGTGTGTGTGTGCTGAGGCAGGACACTGGGGGCCT...GATGGGGAAGTTCCCAGTACCACCCCTATCTATGGCTTTGTTCCTACACGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTAGGGCTTTGCTGTGCTaGGCTCAACAGGTGGGCTCG | + |
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Preference number: 2 (lower is better) Translates to: CGALGIRGKPGCKSQCLPRALLC*AQQVGS Trigger: CGAGCCCACCTGTTGAGCTCAGCACAGCAAAGCCCT...AGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTCTTGCAGGCTCTCTGCTCATGGGGCAGTGCATTTCTCCTGTGACCTCAACCCAAGCTACAGTTTaGCAACAGCCCAGCCGAATG | + |
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Preference number: 2 (lower is better) Translates to: AALAGSLLMGQCISPVTSTQATV*QQPSRM Trigger: CATTCGGCTGGGCTGTTGTCAAACTGTAGCTTGGGT...TGAGGTCACAGGAGAAATGCACTGCCCCATGAGCAGAGAGCCTGCAAGAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR CAA 90 bp | CAACAGGTGGGCTCGAGATCGGCTCTGATTAAGGCAGTGAGCCCCTaGAGGAGGACTCTGGGACAGTTTCACGTTAACCACATACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: QQVGSRSALIKAVSP*RRTLGQFHVNHIQG Trigger: TCCCTGTATGTGGTTAACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGCCGATCTCGAGCCCACCTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCCAAAGCTCAGTCTGAAGGGTGTGGAGTGTGCTGTTTTGGACTTTCTCAGCAGGGCTTTGCTGTGCTaGGCTCAACAGGTGGGCTCG | + |
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Preference number: 2 (lower is better) Translates to: CPKLSLKGVECAVLDFLSRALLC*AQQVGS Trigger: CGAGCCCACCTGTTGAGCTCAGCACAGCAAAGCCCT...GCTGAGAAAGTCCAAAACAGCACACTCCACACCCTTCAGACTGAGCTTTGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| 3UTR-3UTR TCA 90 bp | CCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGTAAAGTGAATCACAGGGCTTTGCTGTGCTaGGCTCAACAGGTGGGCTCG | + |
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Preference number: 2 (lower is better) Translates to: PEQALQSDPHRPASKVNHRALLC*AQQVGS Trigger: CGAGCCCACCTGTTGAGCTCAGCACAGCAAAGCCCT...GTGATTCACTTTACTTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAACTCCACTCCAGCGCAGGACTTAATTTTATTCCTGATGGCCTTTGCGTCCCCCAGCCGAATGCTCTaGGGGCAGAGCACTGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: SNSTPAQDLILFLMAFASPSRML*GQSTAN Trigger: GTTAGCAGTGCTCTGCCCTCAGAGCATTCGGCTGGG...GGACGCAAAGGCCATCAGGAATAAAATTAAGTCCTGCGCTGGAGTGGAGTTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTCGAGATCGGCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGAGACAGTGTTGGCATCTaGTACTGGGTTAAGAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: GSRSALIKAVSPLRRTLGDSVGI*YWVKSL Trigger: GAGACTCTTAACCCAGTAGCAGATGCCAACACTGTC...TCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGCCGATCTCGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| 3UTR-3UTR GCA 90 bp | CACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTTTGGAATCAGGTGTGTGGTaGTCTGGGCATAAGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: HCLPRDARRTLSYPSYSLESGVW*SGHKRK Trigger: TTTCCTCTTATGCCCAGAGCACCACACACCTGATTC...CAAACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| 3UTR CAA 90 bp | TTGGAAATATTCACAGATAGGAATGGGAGCCCAGCAGAGCCCAGCTaGCTTCAGGGTACAGGCAGATGGAGTCTGGGGCCTACAGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: LEIFTDRNGSPAEPS*LQGTGRWSLGPTGK Trigger: CTTACCTGTAGGCCCCAGACTCCATCTGCCTGTACCCTGAAGCAAGCTGGGCTCTGCTGGGCTCCCATTCCTATCTGTGAATATTTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| 3UTR-3UTR TCA 90 bp | ATGGCAGCCATCGAACAAGACACAGCAGCTCTTGCAGGCTCTCTGCTCATGGGGAGTGCATTTCTCCTGTaGCCTCAGAGCTTATCTGTG | + |
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Preference number: 2 (lower is better) Translates to: MAAIEQDTAALAGSLLMGSAFLL*PQSLSV Trigger: CACAGATAAGCTCTGAGGTCACAGGAGAAATGCACT...CCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGCAGCCATCGAACAAGACACAGCAGCTCTTGCAGGCTCTCTGCTCATGGGGGACAGTGTTGGCATCTaGTACTGGGTTAAGAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: MAAIEQDTAALAGSLLMGDSVGI*YWVKSL Trigger: GAGACTCTTAACCCAGTAGCAGATGCCAACACTGTC...CCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTTGTCCAGGAGCTCAACCCTaGCAGTTCCTGTTTGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GALGIRGKPGCKSQCLPCPGAQP*QFLFAH Trigger: GTGAGCAAACAGGAACTGGCAGGGTTGAGCTCCTGG...ACAAGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGCAGCCATCGAACAAGACACAGCAGCTCTTGCAGGCTCTCTGCTCATGGGGGAATCAGGTGTGTGGTaGTCTGGGCATAAGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: MAAIEQDTAALAGSLLMGESGVW*SGHKRK Trigger: TTTCCTCTTATGCCCAGAGCACCACACACCTGATTC...CCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGCAGCCATCGAACAAGACACAGCAGCTCTTGCAGGCTCTCTGCTCATGGGGTTCCTGAACAAGCTTTaGAGTCAGATCCCCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: MAAIEQDTAALAGSLLMGFLNKL*SQIPTD Trigger: GTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAA...CCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGAGATGGGAAATCCTGCCTTCACAGTCCAAAGTCAGCGACAGCACTTGAGGCCTAAGGGACCCTCCTaGTCTCATCTGGGTCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LEMGNPAFTVQSQRQHLRPKGPS*SHLGQE Trigger: CTCTTGACCCAGATGAGAGCAGGAGGGTCCCTTAGG...CCTCAAGTGCTGTCGCTGACTTTGGACTGTGAAGGCAGGATTTCCCATCTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| 3UTR-3UTR GCA 90 bp | CTCCCGTGTAGGAACAAAGCCATAGATAGGGGTGGTACTGGGAACTTCCCCATCCTGCCAGTTCCTGTTTaGTCACTTCCCCAAGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: LPCRNKAIDRGGTGNFPILPVPV*SLPQVL Trigger: TAGGACTTGGGGAAGTGAGCAAACAGGAACTGGCAG...GATGGGGAAGTTCCCAGTACCACCCCTATCTATGGCTTTGTTCCTACACGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCATGTTAGAGAAGTGGCCAGGCAGTCAGGCAGTAAGAACTCATTGAGGGCAGGCCTTGTACTAACTTaGTACATGCCACCATCCCCA | + |
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Preference number: 2 (lower is better) Translates to: PHVREVARQSGSKNSLRAGLVLT*YMPPSP Trigger: TGGGGATGGTGGCATGTAGCAAGTTAGTACAAGGCC...TGCCCTCAATGAGTTCTTACTGCCTGACTGCCTGGCCACTTCTCTAACATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| 3UTR-3UTR TCA 90 bp | CACAATAAGAATCTTCTCTCTCCTCTTGGTGGCGTACACAGAAAACCAGGTTTGAGGGCTTTGCTGTGCTaGGCTCAACAGGTGGGCTCG | + |
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Preference number: 2 (lower is better) Translates to: HNKNLLSPLGGVHRKPGLRALLC*AQQVGS Trigger: CGAGCCCACCTGTTGAGCTCAGCACAGCAAAGCCCT...CAAACCTGGTTTTCTGTGTACGCCACCAAGAGGAGAGAGAAGATTCTTATTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGACCTAAAAGTTCACATCCCTCTTAGGCCCCCAGTGTCCTGCCTCAGCACACTGCCAGTTCCTGTTTaGTCACTTCCCCAAGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: LDLKVHIPLRPPVSCLSTLPVPV*SLPQVL Trigger: TAGGACTTGGGGAAGTGAGCAAACAGGAACTGGCAG...TGTGCTGAGGCAGGACACTGGGGGCCTAAGAGGGATGTGAACTTTTAGGTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGCAACATGTAAATCTCCCTCAGACTCCCAAGGAATTACACATCACTTCCAGGGGTGGGGCAGGTGCTaGCGTGAGAACAGAACCTCT | + |
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Preference number: 2 (lower is better) Translates to: TATCKSPSDSQGITHHFQGWGRC*RENRTS Trigger: AGAGGTTCTGTTCTCACGCCAGCACCTGCCCCACCC...CTGGAAGTGATGTGTAATTCCTTGGGAGTCTGAGGGAGATTTACATGTTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| 3UTR CAA 90 bp | ACAACACAAGAACACCTGAACACTACTAAGCCACAAGCCAGGAGCTaGAGATGGGAAATCCTGCCTTCACAGTCCAAAGTCAGCGACAGC | + |
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Preference number: 2 (lower is better) Translates to: TTQEHLNTTKPQARS*RWEILPSQSKVSDS Trigger: GCTGTCGCTGACTTTGGACTGTGAAGGCAGGATTTCCCATCTCAAGCTCCTGGCTTGTGGCTTAGTAGTGTTCAGGTGTTCTTGTGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| 3UTR-3UTR TCA 90 bp | ATGGCAGCCATCGAACAAGACACAGCAGCTCTTGCAGGCTCTCTGCTCATGGGGTTCGTTTTCATTTCCTaGACAAGCTTTGCAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: MAAIEQDTAALAGSLLMGFVFIS*TSFAVR Trigger: TCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAA...CCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGACCTAAAAGTTCACATCCCTCTTAGGCCCCCAGTGTCCTGCCTCAGCACAGACAGTGTTGGCATCTaGTACTGGGTTAAGAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: LDLKVHIPLRPPVSCLSTDSVGI*YWVKSL Trigger: GAGACTCTTAACCCAGTAGCAGATGCCAACACTGTC...TGTGCTGAGGCAGGACACTGGGGGCCTAAGAGGGATGTGAACTTTTAGGTCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCGTTTTCATTTCCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAACCAGGAGCTCAACCCTaGCAGTTCCTGTTTGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: IRFHFLNKLCSQIPTDPQPGAQP*QFLFAH Trigger: GTGAGCAAACAGGAACTGGCAGGGTTGAGCTCCTGG...TTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| 3UTR CAA 90 bp | AGATTCTGTCCAAAGCTCAGTCTGAAGGGTGTGGAGTGTGCTGTTTaGGACTTTCTCAGCAGGGAGAAGAAACACAGATTGCAGGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: RFCPKLSLKGVECAV*DFLSREKKHRLQVW Trigger: CCAGACCTGCAATCTGTGTTTCTTCTCCCTGCTGAGAAAGTCCAAAACAGCACACTCCACACCCTTCAGACTGAGCTTTGGACAGAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTCTTGCAGGCTCTCTGCTCATGGGGCAGTGCATTTCTCCTGTGACCTCAGCACACACACACACTTaGGTTATGAAGTTTGATTTT | + |
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Preference number: 2 (lower is better) Translates to: AALAGSLLMGQCISPVTSAHTHT*VMKFDF Trigger: AAAATCAAACTTCATAACTCAAGTGTGTGTGTGTGC...TGAGGTCACAGGAGAAATGCACTGCCCCATGAGCAGAGAGCCTGCAAGAGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCTCATCTGGGTCAAGAGCTCCCACTACTCTTGCCACCATTTGATTAGACCTGACAGTGTTGGCATCTaGTACTGGGTTAAGAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: ALIWVKSSHYSCHHLIRPDSVGI*YWVKSL Trigger: GAGACTCTTAACCCAGTAGCAGATGCCAACACTGTC...AGGTCTAATCAAATGGTGGCAAGAGTAGTGGGAGCTCTTGACCCAGATGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| 3UTR-3UTR GCA 90 bp | CACAATAAGAATCTTCTCTCTCCTCTTGGTGGCGTACACAGAAAACCAGGTTTGCCAGGAGCTCAACCCTaGCAGTTCCTGTTTGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: HNKNLLSPLGGVHRKPGLPGAQP*QFLFAH Trigger: GTGAGCAAACAGGAACTGGCAGGGTTGAGCTCCTGG...CAAACCTGGTTTTCTGTGTACGCCACCAAGAGGAGAGAGAAGATTCTTATTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTCAGAGCTTATCTGTGTACCTAAGAGACAGACAGCAGCAACTCCACTCCAGGAATCAGGTGTGTGGTaGTCTGGGCATAAGAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: TSELICVPKRQTAATPLQESGVW*SGHKRK Trigger: TTTCCTCTTATGCCCAGAGCACCACACACCTGATTC...CTGGAGTGGAGTTGCTGCTGTCTGTCTCTTAGGTACACAGATAAGCTCTGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCAACATGTAAATCTCCCTCAGACTCCCAAGGAATTACACATCACTTCCAGAGACACAGCAGCTCTTaGAGGCTCTCTGCTCATGGG | + |
|
Preference number: 2 (lower is better) Translates to: TATCKSPSDSQGITHHFQRHSSS*RLSAHG Trigger: CCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCT...CTGGAAGTGATGTGTAATTCCTTGGGAGTCTGAGGGAGATTTACATGTTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR-3UTR GCA 90 bp | TGTCCAAAGCTCAGTCTGAAGGGTGTGGAGTGTGCTGTTTTGGACTTTCTCAGCCTGGCACGCCCTAAGTaGCACTTGGAAATATTCACA | + |
|
Preference number: 2 (lower is better) Translates to: CPKLSLKGVECAVLDFLSLARPK*HLEIFT Trigger: TGTGAATATTTCCAAGTGGCACTTAGGGCGTGCCAG...GCTGAGAAAGTCCAAAACAGCACACTCCACACCCTTCAGACTGAGCTTTGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR-3UTR CCA 90 bp | TGTCCAAAGCTCAGTCTGAAGGGTGTGGAGTGTGCTGTTTTGGACTTTCTCAGCTCTTCTCTCTCCTCTTaGTGGCGTACACAGAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: CPKLSLKGVECAVLDFLSSSLSS*WRTQKT Trigger: GGTTTTCTGTGTACGCCACCAAGAGGAGAGAGAAGA...GCTGAGAAAGTCCAAAACAGCACACTCCACACCCTTCAGACTGAGCTTTGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR-3UTR CCA 90 bp | ATGTTACATGTTCAAGAGAGTGAGAGTGGGGTTATAGCCCTTGAGAGAATGAAGCAGGCAGATGGAGTCTaGGGCCTACAGGTAAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: MLHVQESESGVIALERMKQADGV*GLQVRE Trigger: CTCCCTTACCTGTAGGCCCCAGACTCCATCTGCCTG...CTTCATTCTCTCAAGGGCTATAACCCCACTCTCACTCTCTTGAACATGTAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR-3UTR GCA 90 bp | CACAATAAGAATCTTCTCTCTCCTCTTGGTGGCGTACACAGAAAACCAGGTTTGAAAGAACAAGGGCTTTaGTGTGCTGAGCTCAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: HNKNLLSPLGGVHRKPGLKEQGL*CAELNR Trigger: CCTGTTGAGCTCAGCACAGCAAAGCCCTTGTTCTTT...CAAACCTGGTTTTCTGTGTACGCCACCAAGAGGAGAGAGAAGATTCTTATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCCAAAGCTCAGTCTGAAGGGTGTGGAGTGTGCTGTTTTGGACTTTCTCAGCTATTTTGGAAAAGCATaGCTCTGGAATTGGTTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: CPKLSLKGVECAVLDFLSYFGKA*LWNWLG Trigger: CCCTAACCAATTCCAGAGCCATGCTTTTCCAAAATA...GCTGAGAAAGTCCAAAACAGCACACTCCACACCCTTCAGACTGAGCTTTGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR-3UTR TCA 90 bp | AGCAACTCCACTCCAGCGCAGGACTTAATTTTATTCCTGATGGCCTTTGCGTCCCACACACTTGAGTTATaGAGTTTGATTTTGCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: SNSTPAQDLILFLMAFASHTLEL*SLILLS Trigger: AGACAGCAAAATCAAACTTCATAACTCAAGTGTGTG...GGACGCAAAGGCCATCAGGAATAAAATTAAGTCCTGCGCTGGAGTGGAGTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCTCAGAGCTTATCTGTGTACCTAAGAGACAGACAGCAGCAACTCCACTCCAGGCACACACACACACTTaGGTTATGAAGTTTGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: TSELICVPKRQTAATPLQAHTHT*VMKFDF Trigger: AAAATCAAACTTCATAACTCAAGTGTGTGTGTGTGC...CTGGAGTGGAGTTGCTGCTGTCTGTCTCTTAGGTACACAGATAAGCTCTGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTAATTTTATTCCTGATGGCCTTTGCGTCCCTAAGGGACCCTCCTGCTCTCATCACACACTTGAGTTATaGAGTTTGATTTTGCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LNFIPDGLCVPKGPSCSHHTLEL*SLILLS Trigger: AGACAGCAAAATCAAACTTCATAACTCAAGTGTGTG...ATGAGAGCAGGAGGGTCCCTTAGGGACGCAAAGGCCATCAGGAATAAAATTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTAATTTTATTCCTGATGGCCTTTGCGTCCCTAAGGGACCCTCCTGCTCTCATGCACACACACACACTTaGGTTATGAAGTTTGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: LNFIPDGLCVPKGPSCSHAHTHT*VMKFDF Trigger: AAAATCAAACTTCATAACTCAAGTGTGTGTGTGTGC...ATGAGAGCAGGAGGGTCCCTTAGGGACGCAAAGGCCATCAGGAATAAAATTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGAATGAAGAACTGTTGAGTCAAAGTCTCCTTGAACTATACACTCTTGCTAAATTCCTGAACAAGCTTTaGAGTCAGATCCCCACAGAC | + |
|
Preference number: 2 (lower is better) Translates to: ENEELLSQSLLELYTLAKFLNKL*SQIPTD Trigger: GTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAA...TTTAGCAAGAGTGTATAGTTCAAGGAGACTTTGACTCAACAGTTCTTCATTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR-3UTR TCA 90 bp | ATGTTACATGTTCAAGAGAGTGAGAGTGGGGTTATAGCCCTTGAGAGAATGAAGCACACACTTGAGTTATaGAGTTTGATTTTGCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: MLHVQESESGVIALERMKHTLEL*SLILLS Trigger: AGACAGCAAAATCAAACTTCATAACTCAAGTGTGTG...CTTCATTCTCTCAAGGGCTATAACCCCACTCTCACTCTCTTGAACATGTAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR CAA 90 bp | CGATTCCAATTCCAGGGTACCTCACAGCTCTATTGCTACCGCCAATaGTATATTTATAGAACTCATTTCTTCAGTATGTATGTTACATGT | + |
|
Preference number: 2 (lower is better) Translates to: RFQFQGTSQLYCYRQ*YIYRTHFFSMYVTC Trigger: ACATGTAACATACATACTGAAGAAATGAGTTCTATAAATATACAATTGGCGGTAGCAATAGAGCTGTGAGGTACCCTGGAATTGGAATCG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR-3UTR TCA 90 bp | GAGAATGAAGAACTGTTGAGTCAAAGTCTCCTTGAACTATACACTCTTGCTAAATTCGTTTTCATTTCCTaGACAAGCTTTGCAGTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ENEELLSQSLLELYTLAKFVFIS*TSFAVR Trigger: TCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAA...TTTAGCAAGAGTGTATAGTTCAAGGAGACTTTGACTCAACAGTTCTTCATTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR CCA 72 bp | CCAGCAGAGCCCAGCTTGCTTCAGGGTACAGGCAGATaGAGTCTGGGGCCTACAGGTAAGGGAGCTGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PAEPSLLQGTGR*SLGPTGKGAGQ Trigger: CTGGCCAGCTCCCTTACCTGTAGGCCCCAGACTCCATCTGCCTGTACCCTGAAGCAAGCTGGGCTCTGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR-3UTR CAA 90 bp | ACGCACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTAAGGCAGTGAGCCCCTaGAGGAGGACTCTGGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: THCLPRDARRTLSYPSYSKAVSP*RRTLGQ Trigger: CTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTT...ACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR TCA 72 bp | CGGTTAGGCAGTGTAGGGGTGGGGCAGGTGCTGGCGTaGGAACAGAACCTCTTCCCAGATTCTCTCAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RLGSVGVGQVLA*EQNLFPDSLRA Trigger: GGCTCTGAGAGAATCTGGGAAGAGGTTCTGTTCTCACGCCAGCACCTGCCCCACCCCTACACTGCCTAACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR GCA 72 bp | TCACAGATAGGAATGGGAGCCCAGCAGAGCCCAGCTTaGTTCAGGGTACAGGCAGATGGAGTCTGGGGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: SQIGMGAQQSPA*FRVQADGVWGL Trigger: TAGGCCCCAGACTCCATCTGCCTGTACCCTGAAGCAAGCTGGGCTCTGCTGGGCTCCCATTCCTATCTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR CCA 72 bp | GGGCATCCCAGGCCCTGGCACGCCCTAAGTGCCACTTaGAAATATTCACAGATAGGAATGGGAGCCCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GHPRPWHALSAT*KYSQIGMGAQQ Trigger: CTGCTGGGCTCCCATTCCTATCTGTGAATATTTCCAAGTGGCACTTAGGGCGTGCCAGGGCCTGGGATGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR-3UTR CAA 90 bp | CACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTTTGGTCCTAGCCATATTCTaGCTGGTCAGGGGGAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: HCLPRDARRTLSYPSYSLVLAIF*LVRGNS Trigger: TGAGTTCCCCCTGACCAGCAAGAATATGGCTAGGAC...CAAACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR TCA 72 bp | CCATGGACAAGTAGGAGAGATCACAGAGAGACTCACTaGGCTTCCATAGGCCCCCAGGAGCTCAACCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PWTSRRDHRETH*ASIGPQELNPA Trigger: GGCAGGGTTGAGCTCCTGGGGGCCTATGGAAGCTCAGTGAGTCTCTCTGTGATCTCTCCTACTTGTCCATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR GCA 72 bp | CAGTTAACAGTCGCCTACGCACTGCCTCCCCAGGGATaGTCGCAGGACCCTGAGTTACCCAAGCTACAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: QLTVAYALPPQG*SQDPELPKLQF Trigger: AAACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTGCGTAGGCGACTGTTAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR CCA 72 bp | GCCTTTGCGTCCCTAAGGGACCCTCCTGCTCTCATCTaGGTCAAGAGCTCCCACTACTCTTGCCACCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: AFASLRDPPALI*VKSSHYSCHHL Trigger: CAAATGGTGGCAAGAGTAGTGGGAGCTCTTGACCCAGATGAGAGCAGGAGGGTCCCTTAGGGACGCAAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR CCA 72 bp | AAACCTGCTAGCGGCATTCACGGGCATCCCAGGCCCTaGCACGCCCTAAGTGCCACTTGGAAATATTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: KPASGIHGHPRP*HALSATWKYSQ Trigger: CTGTGAATATTTCCAAGTGGCACTTAGGGCGTGCCAGGGCCTGGGATGCCCGTGAATGCCGCTAGCAGGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| 3UTR-3UTR CAA 90 bp | GCATCCCAGGCCCTGGCACGCCCTAAGTGCCACTTGGAAATATTCACAGATAGGAAGACACAGCAGCTCTaGCAGGCTCTCTGCTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: ASQALARPKCHLEIFTDRKTQQL*QALCSW Trigger: CCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTT...CCTATCTGTGAATATTTCCAAGTGGCACTTAGGGCGTGCCAGGGCCTGGGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR GCA 72 bp | CAGTTAGCAATCATGGCGCCCAAAGAACAAGGGCTTTaGTGTGCTGAGCTCAACAGGTGGGCTCGAGATCGG | + |
|
Preference number: 3 (lower is better) Translates to: QLAIMAPKEQGL*CAELNRWARDR Trigger: CCGATCTCGAGCCCACCTGTTGAGCTCAGCACAGCAAAGCCCTTGTTCTTTGGGCGCCATGATTGCTAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| 3UTR GCA 72 bp | CATTCACGGGCATCCCAGGCCCTGGCACGCCCTAAGTaGCACTTGGAAATATTCACAGATAGGAATGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: HSRASQALARPK*HLEIFTDRNGS Trigger: GCTCCCATTCCTATCTGTGAATATTTCCAAGTGGCACTTAGGGCGTGCCAGGGCCTGGGATGCCCGTGAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR CCA 72 bp | AGCCCAGCTTGCTTCAGGGTACAGGCAGATGGAGTCTaGGGCCTACAGGTAAGGGAGCTGGCCAGTAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: SPACFRVQADGV*GLQVRELASKI Trigger: TATTTTACTGGCCAGCTCCCTTACCTGTAGGCCCCAGACTCCATCTGCCTGTACCCTGAAGCAAGCTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCAGAGCTTATCTGTGTACCTAAGAGACAGACAGCAGCAACTCCACTCCAGAAGGCAGTGAGCCCCTaGAGGAGGACTCTGGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: TSELICVPKRQTAATPLQKAVSP*RRTLGQ Trigger: CTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTT...CTGGAGTGGAGTTGCTGCTGTCTGTCTCTTAGGTACACAGATAAGCTCTGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| 3UTR TCA 72 bp | AATCATGGCGCCCAAAGAACAAGGGCTTTGCTGTGCTaGGCTCAACAGGTGGGCTCGAGATCGGCTCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: NHGAQRTRALLC*AQQVGSRSALI Trigger: AATCAGAGCCGATCTCGAGCCCACCTGTTGAGCTCAGCACAGCAAAGCCCTTGTTCTTTGGGCGCCATGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR GCA 72 bp | GTAAATGGCAGCCATCGAACAAGACACAGCAGCTCTTaGAGGCTCTCTGCTCATGGGGCAGTGCATTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VNGSHRTRHSSS*RLSAHGAVHFS Trigger: GGAGAAATGCACTGCCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCATTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| 3UTR GCA 72 bp | TCCAGCGCAGGACTTAATTTTATTCCTGATGGCCTTTaGGTCCCTAAGGGACCCTCCTGCTCTCATCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SSAGLNFIPDGL*VPKGPSCSHLG Trigger: ACCCAGATGAGAGCAGGAGGGTCCCTTAGGGACGCAAAGGCCATCAGGAATAAAATTAAGTCCTGCGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR GCA 72 bp | ACAGCAGCTCTTGCAGGCTCTCTGCTCATGGGGCAGTaGATTTCTCCTGTGACCTCAGAGCTTATCTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: TAALAGSLLMGQ*ISPVTSELICV Trigger: TACACAGATAAGCTCTGAGGTCACAGGAGAAATGCACTGCCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGGGCACAGAGCCACCCATGGACAAGTAGGAGAGATCACAGAGAGACTCACTCATACAGGGACAGTGTaGGCATCTGCTACTGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: VGHRATHGQVGEITERLTHTGTV*ASATGL Trigger: TAACCCAGTAGCAGATGCCAACACTGTCCCTGTATG...AGTGAGTCTCTCTGTGATCTCTCCTACTTGTCCATGGGTGGCTCTGTGCCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTGTCCTAGCCATATTCTaGCTGGTCAGGGGGAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: CGALGIRGKPGCKSQCLPVLAIF*LVRGNS Trigger: TGAGTTCCCCCTGACCAGCAAGAATATGGCTAGGAC...AGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCGAGATCGGCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGAGTCCATTCAGAAATTTaGGTAGTATGCACAGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GSRSALIKAVSPLRRTLGVHSEI*VVCTGF Trigger: AAACCCTGTGCATACTACCAAAATTTCTGAATGGAC...TCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGCCGATCTCGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR TCA 72 bp | CAGGCTCTCTGCTCATGGGGCAGTGCATTTCTCCTGTaGCCTCAGAGCTTATCTGTGTACCTAAGAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: QALCSWGSAFLL*PQSLSVYLRDR Trigger: TCTGTCTCTTAGGTACACAGATAAGCTCTGAGGTCACAGGAGAAATGCACTGCCCCATGAGCAGAGAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| 3UTR GCA 72 bp | GGAGGCCCCACCCCTACCTCCATTAATTCACAATGGTaGTGGAGGCTTCTAACAGATTCTGTCCAAAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GGPTPTSINSQW*WRLLTDSVQSS Trigger: TGAGCTTTGGACAGAATCTGTTAGAAGCCTCCAGCACCATTGTGAATTAATGGAGGTAGGGGTGGGGCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR CCA 72 bp | TTTCTCAGCAGGGAGAAGAAACACAGATTGCAGGTCTaGCAAGCGTCAATCAAGAGTGGTCCGGTTAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FLSREKKHRLQV*QASIKSGPVRQ Trigger: CTGCCTAACCGGACCACTCTTGATTGACGCTTGCCAGACCTGCAATCTGTGTTTCTTCTCCCTGCTGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR-3UTR CAA 90 bp | AAGTCTCTTAAGGTTGCATTCAAACTCTTTCTGAAACCTGCTAGCGGCATTCACAAGGCAGTGAGCCCCTaGAGGAGGACTCTGGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: KSLKVAFKLFLKPASGIHKAVSP*RRTLGQ Trigger: CTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTT...GTGAATGCCGCTAGCAGGTTTCAGAAAGAGTTTGAATGCAACCTTAAGAGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCAGAGCTTATCTGTGTACCTAAGAGACAGACAGCAGCAACTCCACTCCAGTACCCAAGCTACAGTTaGACAACAGCCCAGCCGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TSELICVPKRQTAATPLQYPSYS*TTAQPN Trigger: ATTCGGCTGGGCTGTTGTCAAACTGTAGCTTGGGTA...CTGGAGTGGAGTTGCTGCTGTCTGTCTCTTAGGTACACAGATAAGCTCTGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| 3UTR GCA 72 bp | TTTTGGACTTTCTCAGCAGGGAGAAGAAACACAGATTaGAGGTCTGGCAAGCGTCAATCAAGAGTGGTCCGG | + |
|
Preference number: 3 (lower is better) Translates to: FWTFSAGRRNTD*RSGKRQSRVVR Trigger: CCGGACCACTCTTGATTGACGCTTGCCAGACCTGCAATCTGTGTTTCTTCTCCCTGCTGAGAAAGTCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR CCA 72 bp | TTTGGAGGCCCCACCCCTACCTCCATTAATTCACAATaGTGCTGGAGGCTTCTAACAGATTCTGTCCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: FGGPTPTSINSQ*CWRLLTDSVQS Trigger: GCTTTGGACAGAATCTGTTAGAAGCCTCCAGCACCATTGTGAATTAATGGAGGTAGGGGTGGGGCCTCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR TCA 72 bp | AGCTGGGTAACACAAACGTCATTCGTTTTCATTTCCTaGACAAGCTTTGCAGTCAGATCCCCACAGACCCGC | + |
|
Preference number: 3 (lower is better) Translates to: SWVTQTSFVFIS*TSFAVRSPQTR Trigger: GCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAATGACGTTTGTGTTACCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR TCA 72 bp | TCTGGGTCAAGAGCTCCCACTACTCTTGCCACCATTTaGTTAGACCTAAAAGTTCACATCCCTCTTAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SGSRAPTTLATI*LDLKVHIPLRP Trigger: GGGCCTAAGAGGGATGTGAACTTTTAGGTCTAATCAAATGGTGGCAAGAGTAGTGGGAGCTCTTGACCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR GCA 72 bp | CTAAAAGTTCACATCCCTCTTAGGCCCCCAGTGTCCTaGCTCAGCACACACACACACTTGAGTTATGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LKVHIPLRPPVS*LSTHTHLSYEV Trigger: AACTTCATAACTCAAGTGTGTGTGTGTGCTGAGGCAGGACACTGGGGGCCTAAGAGGGATGTGAACTTTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR GCA 72 bp | AAGCTTCACAAACTTTCCGTGAGACCGAAACAAGTATaGCATAGAGCTGCACATGCCCAGGCAAAGAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KLHKLSVRPKQV*HRAAHAQAKKV Trigger: CACCTTCTTTGCCTGGGCATGTGCAGCTCTATGGCATACTTGTTTCGGTCTCACGGAAAGTTTGTGAAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTGTCCATTCAGAAATTTaGGTAGTATGCACAGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVVHSEI*VVCTGF Trigger: AAACCCTGTGCATACTACCAAAATTTCTGAATGGAC...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCAACATGTAAATCTCCCTCAGACTCCCAAGGAATTACACATCACTTCCAGCATACAGGGACAGTGTaGGCATCTGCTACTGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: TATCKSPSDSQGITHHFQHTGTV*ASATGL Trigger: TAACCCAGTAGCAGATGCCAACACTGTCCCTGTATG...CTGGAAGTGATGTGTAATTCCTTGGGAGTCTGAGGGAGATTTACATGTTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR TCA 72 bp | CATAGAGCTGCACATGCCCAGGCAAAGAAGGTGATCTaGCATCTAATGGGAAGCAATGAGCATCTAAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HRAAHAQAKKVI*HLMGSNEHLSS Trigger: AGAGCTTAGATGCTCATTGCTTCCCATTAGATGTCAGATCACCTTCTTTGCCTGGGCATGTGCAGCTCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR TCA 72 bp | GAGAAGTGGCCAGGCAGTCAGGCAGTAAGAACTCATTaGGGGCATTGCTTAGATAAAGTCAAGAGCTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: EKWPGSQAVRTH*GHCLDKVKSYR Trigger: TCTGTAGCTCTTGACTTTATCTAAGCAATGCCCTCAATGAGTTCTTACTGCCTGACTGCCTGGCCACTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR TCA 72 bp | TGGGAATTCTCCAACAGAAGTTACAGTCAGCATTCCTaGTGTTACATCAGAATCGCTGCTATTGCCCCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: WEFSNRSYSQHS*CYIRIAAIAPA Trigger: CGCAGGGGCAATAGCAGCGATTCTGATGTAACATCAGGAATGCTGACTGTAACTTCTGTTGGAGAATTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR GCA 72 bp | ATTCTGTCCAAAGCTCAGTCTGAAGGGTGTGGAGTGTaGTGTTTTGGACTTTCTCAGCAGGGAGAAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: ILSKAQSEGCGV*CFGLSQQGEET Trigger: TGTTTCTTCTCCCTGCTGAGAAAGTCCAAAACAGCACACTCCACACCCTTCAGACTGAGCTTTGGACAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCAAAGCTCAGTCTGAAGGGTGTGGAGTGTGCTGTTTTGGACTTTCTCAGCGTCCATTCAGAAATTTaGGTAGTATGCACAGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: CPKLSLKGVECAVLDFLSVHSEI*VVCTGF Trigger: AAACCCTGTGCATACTACCAAAATTTCTGAATGGAC...GCTGAGAAAGTCCAAAACAGCACACTCCACACCCTTCAGACTGAGCTTTGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR-3UTR CAA 90 bp | AAGTCTCTTAAGGTTGCATTCAAACTCTTTCTGAAACCTGCTAGCGGCATTCACATCTTCTCTCTCCTCTaGGTGGCGTACACAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KSLKVAFKLFLKPASGIHIFSLL*VAYTEN Trigger: GTTTTCTGTGTACGCCACCAAGAGGAGAGAGAAGAT...GTGAATGCCGCTAGCAGGTTTCAGAAAGAGTTTGAATGCAACCTTAAGAGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR GCA 72 bp | TTCACGTTAACCACATACAGGGACAGTGTTGGCATCTaGTACTGGGTTAAGAGTCTCTACTTATTTACACCG | + |
|
Preference number: 3 (lower is better) Translates to: FTLTTYRDSVGI*YWVKSLYLFTP Trigger: CGGTGTAAATAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATGTGGTTAACGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR GCA 72 bp | CGAGGGATGCACGAGATGTCTACTCCCAACATAAAGTaGAAAACAAGATGCGCTGACTCAATTACAAATCGA | + |
|
Preference number: 3 (lower is better) Translates to: RGMHEMSTPNIK*KTRCADSITNR Trigger: TCGATTTGTAATTGAGTCAGCGCATCTTGTTTTGCACTTTATGTTGGGAGTAGACATCTCGTGCATCCCTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR CCA 72 bp | TTAACCACATACAGGGACAGTGTTGGCATCTGCTACTaGGTTAAGAGTCTCTACTTATTTACACCGCACGTA | + |
|
Preference number: 3 (lower is better) Translates to: LTTYRDSVGICY*VKSLYLFTPHV Trigger: TACGTGCGGTGTAAATAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATGTGGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR TCA 72 bp | AGTGGGGTTATAGCCCTTGAGAGAATGAAGAACTGTTaGGTCAAAGTCTCCTTGAACTATACACTCTTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SGVIALERMKNC*VKVSLNYTLLL Trigger: TAGCAAGAGTGTATAGTTCAAGGAGACTTTGACTCAACAGTTCTTCATTCTCTCAAGGGCTATAACCCCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR TCA 72 bp | GTCTACTCCCAACATAAAGTGCAAAACAAGATGCGCTaGCTCAATTACAAATCGATTCCAATTCCAGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: VYSQHKVQNKMR*LNYKSIPIPGY Trigger: GTACCCTGGAATTGGAATCGATTTGTAATTGAGTCAGCGCATCTTGTTTTGCACTTTATGTTGGGAGTAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR TCA 72 bp | GGCAAAGAAGGTGATCTGACATCTAATGGGAAGCAATaGGCATCTAAGCTCTTTAGAAGGAATCCAAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: GKEGDLTSNGKQ*ASKLFRRNPRF Trigger: AAATCTTGGATTCCTTCTAAAGAGCTTAGATGCTCATTGCTTCCCATTAGATGTCAGATCACCTTCTTTGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR TCA 72 bp | CTTGCTAAAAATATCAAAAGCTTCACAAACTTTCCGTaGGACCGAAACAAGTATGCCATAGAGCTGCACATG | + |
|
Preference number: 3 (lower is better) Translates to: LAKNIKSFTNFP*DRNKYAIELHM Trigger: CATGTGCAGCTCTATGGCATACTTGTTTCGGTCTCACGGAAAGTTTGTGAAGCTTTTGATATTTTTAGCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR TCA 72 bp | TGCCCCTGCGTATCTGAAACACATAGCACGGTTAGTTaGAATGTTTCTTTTAGGACAAACACAATAGACATG | + |
|
Preference number: 3 (lower is better) Translates to: CPCVSETHSTVS*NVSFRTNTIDM Trigger: CATGTCTATTGTGTTTGTCCTAAAAGAAACATTTCAACTAACCGTGCTATGTGTTTCAGATACGCAGGGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR GCA 72 bp | AATCGATTCCAATTCCAGGGTACCTCACAGCTCTATTaGTACCGCCAATTGTATATTTATAGAACTCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: NRFQFQGTSQLY*YRQLYIYRTHF Trigger: GAAATGAGTTCTATAAATATACAATTGGCGGTAGCAATAGAGCTGTGAGGTACCCTGGAATTGGAATCGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR CCA 90 bp | ACGCACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTGGCTGTCCAGGGTGCTaGTCCCACCAGCCCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: THCLPRDARRTLSYPSYSGCPGC*SHQPQR Trigger: CCTTTGGGGCTGGTGGGACCAGCACCCTGGACAGCC...ACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTGCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | TTAGACCTAAAAGTTCACATCCCTCTTAGGCCCCCAGTGTCCTGCCTCAGCACAAGGTCCGGTCCACGGTaGGCGCCGTGTCGCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LDLKVHIPLRPPVSCLSTRSGPR*APCRCP Trigger: CGGGCAGCGACACGGCGCTCACCGTGGACCGGACCT...TGTGCTGAGGCAGGACACTGGGGGCCTAAGAGGGATGTGAACTTTTAGGTCTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR CCA 90 bp | CCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGTAAAGTGAATCACCGGCTCTTGCAGCGGTaGTGCCGGCCGGGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PEQALQSDPHRPASKVNHRLLQR*CRPGSE Trigger: CTCAGACCCCGGCCGGCACCACCGCTGCAAGAGCCG...GTGATTCACTTTACTTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR TCA 90 bp | GGCTCGAGATCGGCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGAGTTGAGGTTGGTGTCTaGTCCCCCTCGGCGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSRSALIKAVSPLRRTLGVEVGV*SPSAYV Trigger: AACATACGCCGAGGGGGATCAGACACCAACCTCAAC...TCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGCCGATCTCGAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCGAGATCGGCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGATCTCAAAGACCTGCTTaGTGCGTCCAGCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRSALIKAVSPLRRTLGSQRPA*CVQPAA Trigger: AGCAGCAGGCTGGACGCATCAAGCAGGTCTTTGAGA...TCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGCCGATCTCGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | ATTCGTTTTCATTTCCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGGTCCACCCGGCTCTTaGAGCGGTGGTGCCGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IRFHFLNKLCSQIPTDPQGPPGS*SGGAGR Trigger: CCGGCCGGCACCACCGCTGCAAGAGCCGGGTGGACC...TTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR GCA 90 bp | ACGCACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTAGCCTGCTGCTTGTCTaGACTGCTGACCAGTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: THCLPRDARRTLSYPSYSSLLLV*TADQFQ Trigger: CTGAAACTGGTCAGCAGTGCAGACAAGCAGCAGGCT...ACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | CCAAAGAACAAGGGCTTTGCTGTGCTGAGCTCAACAGGTGGGCTCGAGATCGGCATGCGTCCAGCCTGCTaGTTGTCTGCACTGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: PKNKGFAVLSSTGGLEIGMRPAC*LSALLT Trigger: GGTCAGCAGTGCAGACAAGCAGCAGGCTGGACGCAT...GCCGATCTCGAGCCCACCTGTTGAGCTCAGCACAGCAAAGCCCTTGTTCTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | TTAGACCTAAAAGTTCACATCCCTCTTAGGCCCCCAGTGTCCTGCCTCAGCACAGGCTGTCCAGGGTGCTaGTCCCACCAGCCCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LDLKVHIPLRPPVSCLSTGCPGC*SHQPQR Trigger: CCTTTGGGGCTGGTGGGACCAGCACCCTGGACAGCC...TGTGCTGAGGCAGGACACTGGGGGCCTAAGAGGGATGTGAACTTTTAGGTCTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR CAA 72 bp | TTCACAGATAGGAATGGGAGCCCAGCAGAGCCCAGCTaGCTTCAGGGTACAGGCAGATGGAGTCTGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FTDRNGSPAEPS*LQGTGRWSLGP Trigger: AGGCCCCAGACTCCATCTGCCTGTACCCTGAAGCAAGCTGGGCTCTGCTGGGCTCCCATTCCTATCTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR CAA 72 bp | CGGGCATCCCAGGCCCTGGCACGCCCTAAGTGCCACTaGGAAATATTCACAGATAGGAATGGGAGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RASQALARPKCH*EIFTDRNGSPA Trigger: TGCTGGGCTCCCATTCCTATCTGTGAATATTTCCAAGTGGCACTTAGGGCGTGCCAGGGCCTGGGATGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR TCA 90 bp | ACCACATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTAGTGCCGGCCGGGGTCTaGGTAGGTCCGGTCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: TTYRDSVGICYWVKSLYLVPAGV*VGPVHG Trigger: ACCGTGGACCGGACCTACTCAGACCCCGGCCGGCAC...TAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR TCA 90 bp | GGCTCGAGATCGGCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGATGTTCAGGGGTAGGCTaGGGGTATTCATGTCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSRSALIKAVSPLRRTLGCSGVG*GYSCHG Trigger: GCCATGACATGAATACCCTCAGCCTACCCCTGAACA...TCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGCCGATCTCGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR TCA 90 bp | CCAAAGAACAAGGGCTTTGCTGTGCTGAGCTCAACAGGTGGGCTCGAGATCGGCTCTCAAAGACCTGCTTaGTGCGTCCAGCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKNKGFAVLSSTGGLEIGSQRPA*CVQPAA Trigger: AGCAGCAGGCTGGACGCATCAAGCAGGTCTTTGAGA...GCCGATCTCGAGCCCACCTGTTGAGCTCAGCACAGCAAAGCCCTTGTTCTTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | CACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTTTGAGCCTGCTGCTTGTCTaGACTGCTGACCAGTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HCLPRDARRTLSYPSYSLSLLLV*TADQFQ Trigger: CTGAAACTGGTCAGCAGTGCAGACAAGCAGCAGGCT...CAAACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCTCTTGCAGGCTCTCTGCTCATGGGGCAGTGCATTTCTCCTGTGACCTCATCACAGCAAAGAAGGTaGCAAGGATGTGGGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AALAGSLLMGQCISPVTSSQQRR*QGCGSG Trigger: GCCGCTCCCACATCCTTGGCACCTTCTTTGCTGTGA...TGAGGTCACAGGAGAAATGCACTGCCCCATGAGCAGAGAGCCTGCAAGAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CCA 90 bp | ACGCACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTTGTCCTTTGAGCTCCTaGTCACGCCATTCTGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: THCLPRDARRTLSYPSYSCPLSS*SRHSVR Trigger: TCGAACAGAATGGCGTGACCAGGAGCTCAAAGGACA...ACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | CCAAAGAACAAGGGCTTTGCTGTGCTGAGCTCAACAGGTGGGCTCGAGATCGGCCTGCTCTCCAGGCAGTaGGGAGCAGTTCGAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKNKGFAVLSSTGGLEIGLLSRQ*GAVRDF Trigger: GAAATCTCGAACTGCTCCCCACTGCCTGGAGAGCAG...GCCGATCTCGAGCCCACCTGTTGAGCTCAGCACAGCAAAGCCCTTGTTCTTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCGAGATCGGCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGAAAGGTGCCAAGGATGTaGGAGCGGCTCTTCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: GSRSALIKAVSPLRRTLGKVPRM*ERLFIM Trigger: CATGATGAAGAGCCGCTCCCACATCCTTGGCACCTT...TCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGCCGATCTCGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR CAA 72 bp | GATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTTaGACAACAGCCCAGCCGAATGCTCTGAGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DARRTLSYPSYS*TTAQPNALRAE Trigger: CTCTGCCCTCAGAGCATTCGGCTGGGCTGTTGTCAAACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTCGGGGACATCGAAGTTaGGGTTGGTGTCTGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVRGHRS*GWCLIP Trigger: GGGGATCAGACACCAACCTCAACTTCGATGTCCCCG...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | ACGCACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTTCTGTTCGATCTCCCTaGGCTTTCTGTGATACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: THCLPRDARRTLSYPSYSSVRSP*AFCDTA Trigger: AGCAGTATCACAGAAAGCTCAGGGAGATCGAACAGA...ACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGTCAGGGGGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAATGCGTCCAGCCTGCTaGTTGTCTGCACTGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: CWSGGTQNTAVSNHGAQRMRPAC*LSALLT Trigger: GGTCAGCAGTGCAGACAAGCAGCAGGCTGGACGCAT...TCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCCCCCTGACCAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCAGCCATCGAACAAGACACAGCAGCTCTTGCAGGCTCTCTGCTCATGGGGAAACTGCACCTTCAGTaGCTCGATGTCTTCCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MAAIEQDTAALAGSLLMGKLHLQ*LDVFRQ Trigger: CTGGCGGAAGACATCGAGGCACTGAAGGTGCAGTTT...CCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR GCA 90 bp | CCAAAGAACAAGGGCTTTGCTGTGCTGAGCTCAACAGGTGGGCTCGAGATCGGCAGATTGGCTGTCTCATaGTGGTGCAGCTCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKNKGFAVLSSTGGLEIGRLAVS*WCSSVR Trigger: CCTGACAGAGCTGCACCAGCATGAGACAGCCAATCT...GCCGATCTCGAGCCCACCTGTTGAGCTCAGCACAGCAAAGCCCTTGTTCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCAGCCATCGAACAAGACACAGCAGCTCTTGCAGGCTCTCTGCTCATGGGGGCGCTGGCCAATTCCTaGTTCAGATTGGCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MAAIEQDTAALAGSLLMGALANS*FRLAVS Trigger: TGAGACAGCCAATCTGAAGCAGGAATTGGCCAGCGC...CCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CCA 90 bp | CTTAATTTTATTCCTGATGGCCTTTGCGTCCCTAAGGGACCCTCCTGCTCTCATGGCTGTCCAGGGTGCTaGTCCCACCAGCCCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNFIPDGLCVPKGPSCSHGCPGC*SHQPQR Trigger: CCTTTGGGGCTGGTGGGACCAGCACCCTGGACAGCC...ATGAGAGCAGGAGGGTCCCTTAGGGACGCAAAGGCCATCAGGAATAAAATTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGCCATCGAACAAGACACAGCAGCTCTTGCAGGCTCTCTGCTCATGGGGTTGGCTGTCTCATGCTaGTGCAGCTCTGTCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MAAIEQDTAALAGSLLMGLAVSC*CSSVRS Trigger: TGACCTGACAGAGCTGCACCAGCATGAGACAGCCAA...CCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CCA 90 bp | CACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTTTGTTAGAGATGCGGGTCTaGCAAGATTCCAAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HCLPRDARRTLSYPSYSLLEMRV*QDSKAS Trigger: GGAAGCCTTGGAATCTTGCCAGACCCGCATCTCTAA...CAAACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | CCAAAGAACAAGGGCTTTGCTGTGCTGAGCTCAACAGGTGGGCTCGAGATCGGCAAGGTGCCAAGGATGTaGGAGCGGCTCTTCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: PKNKGFAVLSSTGGLEIGKVPRM*ERLFIM Trigger: CATGATGAAGAGCCGCTCCCACATCCTTGGCACCTT...GCCGATCTCGAGCCCACCTGTTGAGCTCAGCACAGCAAAGCCCTTGTTCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR CAA 72 bp | GGCTCGAGATCGGCTCTGATTAAGGCAGTGAGCCCCTaGAGGAGGACTCTGGGACAGTTTCACGTTAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSRSALIKAVSP*RRTLGQFHVNH Trigger: GTGGTTAACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGCCGATCTCGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTTCTCAAAGACCTGCTTaGTGCGTCCAGCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVSQRPA*CVQPAA Trigger: AGCAGCAGGCTGGACGCATCAAGCAGGTCTTTGAGA...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | CACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTTTGTCCCTGAGCTTTCTGTaGTACTGCTCCAACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HCLPRDARRTLSYPSYSLSLSFL*YCSNFF Trigger: GAAGAAGTTGGAGCAGTATCACAGAAAGCTCAGGGA...CAAACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCGTGTAGGAACAAAGCCATAGATAGGGGTGGTACTGGGAACTTCCCCATCGCTGTCTCATGCTGGTaGAGCTCTGTCAGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LPCRNKAIDRGGTGNFPIAVSCW*SSVRSW Trigger: CCATGACCTGACAGAGCTGCACCAGCATGAGACAGC...GATGGGGAAGTTCCCAGTACCACCCCTATCTATGGCTTTGTTCCTACACGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR GCA 90 bp | GTAGGGCACAGAGCCACCCATGGACAAGTAGGAGAGATCACAGAGAGACTCACTTCACAGCAAAGAAGGTaGCAAGGATGTGGGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGHRATHGQVGEITERLTSQQRR*QGCGSG Trigger: GCCGCTCCCACATCCTTGGCACCTTCTTTGCTGTGA...AGTGAGTCTCTCTGTGATCTCTCCTACTTGTCCATGGGTGGCTCTGTGCCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGTCAGGGGGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGATCACAGCAAAGAAGGTaGCAAGGATGTGGGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CWSGGTQNTAVSNHGAQRSQQRR*QGCGSG Trigger: GCCGCTCCCACATCCTTGGCACCTTCTTTGCTGTGA...TCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCCCCCTGACCAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCTTGCAGGCTCTCTGCTCATGGGGCAGTGCATTTCTCCTGTGACCTCATGTCCTTTGAGCTCCTaGTCACGCCATTCTGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: AALAGSLLMGQCISPVTSCPLSS*SRHSVR Trigger: TCGAACAGAATGGCGTGACCAGGAGCTCAAAGGACA...TGAGGTCACAGGAGAAATGCACTGCCCCATGAGCAGAGAGCCTGCAAGAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CCA 90 bp | ATTCGTTTTCATTTCCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGGCTGTCCAGGGTGCTaGTCCCACCAGCCCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRFHFLNKLCSQIPTDPQGCPGC*SHQPQR Trigger: CCTTTGGGGCTGGTGGGACCAGCACCCTGGACAGCC...TTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGGCACAGAGCCACCCATGGACAAGTAGGAGAGATCACAGAGAGACTCACTTCCGCCAGCTGGGTTTaGGTAACCTTGATCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGHRATHGQVGEITERLTSASWV*VTLISL Trigger: GAGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGA...AGTGAGTCTCTCTGTGATCTCTCCTACTTGTCCATGGGTGGCTCTGTGCCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTTCCGCCAGCTGGGTTTaGGTAACCTTGATCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVSASWV*VTLISL Trigger: GAGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGA...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | CCAAAGAACAAGGGCTTTGCTGTGCTGAGCTCAACAGGTGGGCTCGAGATCGGCTTAGAGATGCGGGTCTaGCAAGATTCCAAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKNKGFAVLSSTGGLEIGLEMRV*QDSKAS Trigger: GGAAGCCTTGGAATCTTGCCAGACCCGCATCTCTAA...GCCGATCTCGAGCCCACCTGTTGAGCTCAGCACAGCAAAGCCCTTGTTCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTTGGGCGAGACAAACTTaGCCAGGGTGGACACACACA | + |
|
Preference number: 4 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVWARQT*PGWTHT Trigger: TGTGTGTGTCCACCCTGGCCAAGTTTGTCTCGCCCA...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | AGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAACAAGGGCTTTGCTGTGCTCGGGGACATCGAAGTTaGGGTTGGTGTCTGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTQQLAIMAPKEQGLCCARGHRS*GWCLIP Trigger: GGGGATCAGACACCAACCTCAACTTCGATGTCCCCG...AGCACAGCAAAGCCCTTGTTCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGTAAAGTGAATCACCGGGGACATCGAAGTTaGGGTTGGTGTCTGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PEQALQSDPHRPASKVNHRGHRS*GWCLIP Trigger: GGGGATCAGACACCAACCTCAACTTCGATGTCCCCG...GTGATTCACTTTACTTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTGGCGATGGAGTGGGCTaGCTTCTGGTTTTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVGDGVG*LLVFLL Trigger: GAGAAGAAAAACCAGAAGTCAGCCCACTCCATCGCC...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGTCAGGGGGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAAAACTGCACCTTCAGTaGCTCGATGTCTTCCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CWSGGTQNTAVSNHGAQRKLHLQ*LDVFRQ Trigger: CTGGCGGAAGACATCGAGGCACTGAAGGTGCAGTTT...TCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCCCCCTGACCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGTCAGGGGGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAAGATTGGCTGTCTCATaGTGGTGCAGCTCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CWSGGTQNTAVSNHGAQRRLAVS*WCSSVR Trigger: CCTGACAGAGCTGCACCAGCATGAGACAGCCAATCT...TCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCCCCCTGACCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTGCGCTGGCCAATTCCTaGTTCAGATTGGCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVALANS*FRLAVS Trigger: TGAGACAGCCAATCTGAAGCAGGAATTGGCCAGCGC...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | GGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTTGTTCACAGCAAAGAAGGTaGCAAGGATGTGGGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GALGIRGKPGCKSQCLPCSQQRR*QGCGSG Trigger: GCCGCTCCCACATCCTTGGCACCTTCTTTGCTGTGA...ACAAGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS-3UTR CCA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTTCTGAAGTTGGGCGATaGAGTGGGCTGACTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVSEVGR*SGLTSG Trigger: ACCAGAAGTCAGCCCACTCCATCGCCCAACTTCAGA...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCGTGTAGGAACAAAGCCATAGATAGGGGTGGTACTGGGAACTTCCCCATCTCTGAAGTTGGGCGATaGAGTGGGCTGACTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPCRNKAIDRGGTGNFPISEVGR*SGLTSG Trigger: ACCAGAAGTCAGCCCACTCCATCGCCCAACTTCAGA...GATGGGGAAGTTCCCAGTACCACCCCTATCTATGGCTTTGTTCCTACACGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGGTCAGGGGGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGATCTGAAGTTGGGCGATaGAGTGGGCTGACTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CWSGGTQNTAVSNHGAQRSEVGR*SGLTSG Trigger: ACCAGAAGTCAGCCCACTCCATCGCCCAACTTCAGA...TCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCCCCCTGACCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTTTGGCTGTCTCATGCTaGTGCAGCTCTGTCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVLAVSC*CSSVRS Trigger: TGACCTGACAGAGCTGCACCAGCATGAGACAGCCAA...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR CAA 72 bp | AGTAAATGGCAGCCATCGAACAAGACACAGCAGCTCTaGCAGGCTCTCTGCTCATGGGGCAGTGCATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKWQPSNKTQQL*QALCSWGSAFL Trigger: GAGAAATGCACTGCCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCATTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR TCA 90 bp | GGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTTGTGGCGATGGAGTGGGCTaGCTTCTGGTTTTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GALGIRGKPGCKSQCLPCGDGVG*LLVFLL Trigger: GAGAAGAAAAACCAGAAGTCAGCCCACTCCATCGCC...ACAAGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | GGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTTGTTGCTCCAACTTCTTCTaGAGTTGGGCGATGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GALGIRGKPGCKSQCLPCCSNFF*SWAMEW Trigger: CCACTCCATCGCCCAACTTCAGAAGAAGTTGGAGCA...ACAAGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCGAGATCGGCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGATCCTCTTGCAGAGTCTaGGAGATAAAGCCATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRSALIKAVSPLRRTLGSSCRV*EIKPYS Trigger: AGAATATGGCTTTATCTCTCAGACTCTGCAAGAGGA...TCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGCCGATCTCGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | TTAGACCTAAAAGTTCACATCCCTCTTAGGCCCCCAGTGTCCTGCCTCAGCACAAGCCTGCTGCTTGTCTaGACTGCTGACCAGTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LDLKVHIPLRPPVSCLSTSLLLV*TADQFQ Trigger: CTGAAACTGGTCAGCAGTGCAGACAAGCAGCAGGCT...TGTGCTGAGGCAGGACACTGGGGGCCTAAGAGGGATGTGAACTTTTAGGTCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | CTTAATTTTATTCCTGATGGCCTTTGCGTCCCTAAGGGACCCTCCTGCTCTCATATGCGTCCAGCCTGCTaGTTGTCTGCACTGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LNFIPDGLCVPKGPSCSHMRPAC*LSALLT Trigger: GGTCAGCAGTGCAGACAAGCAGCAGGCTGGACGCAT...ATGAGAGCAGGAGGGTCCCTTAGGGACGCAAAGGCCATCAGGAATAAAATTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | TTAGACCTAAAAGTTCACATCCCTCTTAGGCCCCCAGTGTCCTGCCTCAGCACAAAACTGCACCTTCAGTaGCTCGATGTCTTCCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LDLKVHIPLRPPVSCLSTKLHLQ*LDVFRQ Trigger: CTGGCGGAAGACATCGAGGCACTGAAGGTGCAGTTT...TGTGCTGAGGCAGGACACTGGGGGCCTAAGAGGGATGTGAACTTTTAGGTCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | CACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTTTGTATTCTCTCTTAAACTaGACCTTCAGTGCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: HCLPRDARRTLSYPSYSLYSLLN*TFSASM Trigger: CATCGAGGCACTGAAGGTGCAGTTTAAGAGAGAATA...CAAACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGTAAAGTGAATCACGCTGTCTCATGCTGGTaGAGCTCTGTCAGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PEQALQSDPHRPASKVNHAVSCW*SSVRSW Trigger: CCATGACCTGACAGAGCTGCACCAGCATGAGACAGC...GTGATTCACTTTACTTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTGCGCTGGCCAATTCCTaGTTCAGATTGGCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CGALGIRGKPGCKSQCLPALANS*FRLAVS Trigger: TGAGACAGCCAATCTGAAGCAGGAATTGGCCAGCGC...AGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | TTAGACCTAAAAGTTCACATCCCTCTTAGGCCCCCAGTGTCCTGCCTCAGCACAGCGCTGGCCAATTCCTaGTTCAGATTGGCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LDLKVHIPLRPPVSCLSTALANS*FRLAVS Trigger: TGAGACAGCCAATCTGAAGCAGGAATTGGCCAGCGC...TGTGCTGAGGCAGGACACTGGGGGCCTAAGAGGGATGTGAACTTTTAGGTCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | CCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGTAAAGTGAATCACAGGGTATTCATGTCATaGCGGTCCACCCGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PEQALQSDPHRPASKVNHRVFMS*RSTRLL Trigger: CAAGAGCCGGGTGGACCGCCATGACATGAATACCCT...GTGATTCACTTTACTTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR CCA 90 bp | AGCAACTCCACTCCAGCGCAGGACTTAATTTTATTCCTGATGGCCTTTGCGTCCCTGCTCTCCAGGCAGTaGGGAGCAGTTCGAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNSTPAQDLILFLMAFASLLSRQ*GAVRDF Trigger: GAAATCTCGAACTGCTCCCCACTGCCTGGAGAGCAG...GGACGCAAAGGCCATCAGGAATAAAATTAAGTCCTGCGCTGGAGTGGAGTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTCATCTGGGTCAAGAGCTCCCACTACTCTTGCCACCATTTGATTAGACCTCTGCTCTCCAGGCAGTaGGGAGCAGTTCGAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALIWVKSSHYSCHHLIRPLLSRQ*GAVRDF Trigger: GAAATCTCGAACTGCTCCCCACTGCCTGGAGAGCAG...AGGTCTAATCAAATGGTGGCAAGAGTAGTGGGAGCTCTTGACCCAGATGAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTCGTGAGGGATACCCCTaGCATGCTAGATTTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVREGYP*HARFTA Trigger: AGCAGTAAATCTAGCATGCCAGGGGTATCCCTCACG...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGGCACAGAGCCACCCATGGACAAGTAGGAGAGATCACAGAGAGACTCACTCGTGAGGGATACCCCTaGCATGCTAGATTTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGHRATHGQVGEITERLTREGYP*HARFTA Trigger: AGCAGTAAATCTAGCATGCCAGGGGTATCCCTCACG...AGTGAGTCTCTCTGTGATCTCTCCTACTTGTCCATGGGTGGCTCTGTGCCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | ACGCACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTTATTCCGGATCAAGTTaGCAAACTCTCTGGACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: THCLPRDARRTLSYPSYSYSGSS*QTLWTY Trigger: ATAAGTCCAGAGAGTTTGCCAACTTGATCCGGAATA...ACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTGTCAGGTCATGGAGCTaGTCTTCAAGTCGCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVVRSWS*SSSRSY Trigger: GTATGAGCGACTTGAAGACCAGCTCCATGACCTGAC...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTTGTAGCGGCTCTTCATCATaGGCGAGACAAACTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GALGIRGKPGCKSQCLPCSGSSS*ARQTWP Trigger: TGGCCAAGTTTGTCTCGCCCATGATGAAGAGCCGCT...ACAAGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTAAGGTGCCAAGGATGTaGGAGCGGCTCTTCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: CGALGIRGKPGCKSQCLPKVPRM*ERLFIM Trigger: CATGATGAAGAGCCGCTCCCACATCCTTGGCACCTT...AGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGTAAAGTGAATCACTGCTCCAACTTCTTCTaGAGTTGGGCGATGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEQALQSDPHRPASKVNHCSNFF*SWAMEW Trigger: CCACTCCATCGCCCAACTTCAGAAGAAGTTGGAGCA...GTGATTCACTTTACTTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGGCACAGAGCCACCCATGGACAAGTAGGAGAGATCACAGAGAGACTCACTCAGTTTCAGATACTCTaGAACGTTCCCATCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGHRATHGQVGEITERLTQFQIL*NVPISG Trigger: TCCCGAGATGGGAACGTTGCAGAGTATCTGAAACTG...AGTGAGTCTCTCTGTGATCTCTCCTACTTGTCCATGGGTGGCTCTGTGCCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | ACCACATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTAATGCGTCCAGCCTGCTaGTTGTCTGCACTGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: TTYRDSVGICYWVKSLYLMRPAC*LSALLT Trigger: GGTCAGCAGTGCAGACAAGCAGCAGGCTGGACGCAT...TAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | GGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAACAAGGGCTTTGAAACTGCACCTTCAGTaGCTCGATGTCTTCCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTQNTAVSNHGAQRTRALKLHLQ*LDVFRQ Trigger: CTGGCGGAAGACATCGAGGCACTGAAGGTGCAGTTT...CAAAGCCCTTGTTCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCAGCCATCGAACAAGACACAGCAGCTCTTGCAGGCTCTCTGCTCATGGGGTATTCTCTCTTAAACTaGACCTTCAGTGCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: MAAIEQDTAALAGSLLMGYSLLN*TFSASM Trigger: CATCGAGGCACTGAAGGTGCAGTTTAAGAGAGAATA...CCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR GCA 90 bp | CTTAATTTTATTCCTGATGGCCTTTGCGTCCCTAAGGGACCCTCCTGCTCTCATGCTGTCTCATGCTGGTaGAGCTCTGTCAGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LNFIPDGLCVPKGPSCSHAVSCW*SSVRSW Trigger: CCATGACCTGACAGAGCTGCACCAGCATGAGACAGC...ATGAGAGCAGGAGGGTCCCTTAGGGACGCAAAGGCCATCAGGAATAAAATTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | AGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAACAAGGGCTTTGCTGTGCTAGATTGGCTGTCTCATaGTGGTGCAGCTCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTQQLAIMAPKEQGLCCARLAVS*WCSSVR Trigger: CCTGACAGAGCTGCACCAGCATGAGACAGCCAATCT...AGCACAGCAAAGCCCTTGTTCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | GGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAACAAGGGCTTTGAGATTGGCTGTCTCATaGTGGTGCAGCTCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTQNTAVSNHGAQRTRALRLAVS*WCSSVR Trigger: CCTGACAGAGCTGCACCAGCATGAGACAGCCAATCT...CAAAGCCCTTGTTCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTGCATCCTTCAGAGAGTaGTGTATTTCCTTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVASFRE*CISFRL Trigger: CAGCCTGAAGGAAATACACCACTCTCTGAAGGATGC...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | TTAGACCTAAAAGTTCACATCCCTCTTAGGCCCCCAGTGTCCTGCCTCAGCACAGTTCGAGATTTCACGTaGGCATCCTTCAGAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDLKVHIPLRPPVSCLSTVRDFT*ASFREW Trigger: CCACTCTCTGAAGGATGCCCACGTGAAATCTCGAAC...TGTGCTGAGGCAGGACACTGGGGGCCTAAGAGGGATGTGAACTTTTAGGTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTGTTCGAGATTTCACGTaGGCATCCTTCAGAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGALGIRGKPGCKSQCLPVRDFT*ASFREW Trigger: CCACTCTCTGAAGGATGCCCACGTGAAATCTCGAAC...AGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | ACAATGGTGCTGGAGGCTTCTAACAGATTCTGTCCAAAGCTCAGTCTGAAGGGTCTGCTCTCCAGGCAGTaGGGAGCAGTTCGAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TMVLEASNRFCPKLSLKGLLSRQ*GAVRDF Trigger: GAAATCTCGAACTGCTCCCCACTGCCTGGAGAGCAG...ACCCTTCAGACTGAGCTTTGGACAGAATCTGTTAGAAGCCTCCAGCACCATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTCGTGAGGGATACCCCTaGCATGCTAGATTTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CGALGIRGKPGCKSQCLPREGYP*HARFTA Trigger: AGCAGTAAATCTAGCATGCCAGGGGTATCCCTCACG...AGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | CTTAATTTTATTCCTGATGGCCTTTGCGTCCCTAAGGGACCCTCCTGCTCTCATTCCGCCAGCTGGGTTTaGGTAACCTTGATCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNFIPDGLCVPKGPSCSHSASWV*VTLISL Trigger: GAGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGA...ATGAGAGCAGGAGGGTCCCTTAGGGACGCAAAGGCCATCAGGAATAAAATTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | AGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAACAAGGGCTTTGCTGTGCTTTGGCTGTCTCATGCTaGTGCAGCTCTGTCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTQQLAIMAPKEQGLCCALAVSC*CSSVRS Trigger: TGACCTGACAGAGCTGCACCAGCATGAGACAGCCAA...AGCACAGCAAAGCCCTTGTTCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | AGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAACAAGGGCTTTGCTGTGCTAGCGGCTCTTCATCATaGGCGAGACAAACTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTQQLAIMAPKEQGLCCASGSSS*ARQTWP Trigger: TGGCCAAGTTTGTCTCGCCCATGATGAAGAGCCGCT...AGCACAGCAAAGCCCTTGTTCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAACAAGGGCTTTGAGCGGCTCTTCATCATaGGCGAGACAAACTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTQNTAVSNHGAQRTRALSGSSS*ARQTWP Trigger: TGGCCAAGTTTGTCTCGCCCATGATGAAGAGCCGCT...CAAAGCCCTTGTTCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCAGAGCTTATCTGTGTACCTAAGAGACAGACAGCAGCAACTCCACTCCAGAAGGTGCCAAGGATGTaGGAGCGGCTCTTCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: TSELICVPKRQTAATPLQKVPRM*ERLFIM Trigger: CATGATGAAGAGCCGCTCCCACATCCTTGGCACCTT...CTGGAGTGGAGTTGCTGCTGTCTGTCTCTTAGGTACACAGATAAGCTCTGAGGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CCA 90 bp | ACGCACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTAGTTTTTACAGAATATaGCGAGAAGAGTCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: THCLPRDARRTLSYPSYSSFYRI*REESQQ Trigger: TTGCTGTGACTCTTCTCGCCATATTCTGTAAAAACT...ACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTGCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR CAA 72 bp | AATCCTGCCTTCACAGTCCAAAGTCAGCGACAGCACTaGAGGTCACCACTTGCTTCACTGAGTGGCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: NPAFTVQSQRQH*RSPLASLSGCL Trigger: TAAGCAGCCACTCAGTGAAGCAAGTGGTGACCTCAAGTGCTGTCGCTGACTTTGGACTGTGAAGGCAGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR GCA 90 bp | ATTCGTTTTCATTTCCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGCTGTCTCATGCTGGTaGAGCTCTGTCAGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: IRFHFLNKLCSQIPTDPQAVSCW*SSVRSW Trigger: CCATGACCTGACAGAGCTGCACCAGCATGAGACAGC...TTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGTCAGGGGGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGATTGAGTTTGACCTTGTaGAAATCCAGGATGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: CWSGGTQNTAVSNHGAQRLSLTL*KSRMPS Trigger: CGATGGCATCCTGGATTTCCACAAGGTCAAACTCAA...TCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCCCCCTGACCAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAACAAGGGCTTTGTGTCCTTTGAGCTCCTaGTCACGCCATTCTGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GTQNTAVSNHGAQRTRALCPLSS*SRHSVR Trigger: TCGAACAGAATGGCGTGACCAGGAGCTCAAAGGACA...CAAAGCCCTTGTTCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | AGCAACTCCACTCCAGCGCAGGACTTAATTTTATTCCTGATGGCCTTTGCGTCCGTCAGGTCATGGAGCTaGTCTTCAAGTCGCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: SNSTPAQDLILFLMAFASVRSWS*SSSRSY Trigger: GTATGAGCGACTTGAAGACCAGCTCCATGACCTGAC...GGACGCAAAGGCCATCAGGAATAAAATTAAGTCCTGCGCTGGAGTGGAGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGTAAAGTGAATCACGTCAGGTCATGGAGCTaGTCTTCAAGTCGCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: PEQALQSDPHRPASKVNHVRSWS*SSSRSY Trigger: GTATGAGCGACTTGAAGACCAGCTCCATGACCTGAC...GTGATTCACTTTACTTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTTGTATTCCTGCTTCAGATTaGCTGTCTCATGCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GALGIRGKPGCKSQCLPCIPASD*LSHAGA Trigger: TGCACCAGCATGAGACAGCCAATCTGAAGCAGGAAT...ACAAGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | ACCACATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTATGGGCGAGACAAACTTaGCCAGGGTGGACACACACA | + |
|
Preference number: 4 (lower is better) Translates to: TTYRDSVGICYWVKSLYLWARQT*PGWTHT Trigger: TGTGTGTGTCCACCCTGGCCAAGTTTGTCTCGCCCA...TAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR CAA 72 bp | CTCTCTCCTCTTGGTGGCGTACACAGAAAACCAGGTTaGTCAGTAAATGGCAGCCATCGAACAAGACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPLGGVHRKPG*SVNGSHRTRHS Trigger: GCTGTGTCTTGTTCGATGGCTGCCATTTACTGACAAACCTGGTTTTCTGTGTACGCCACCAAGAGGAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| 3UTR CAA 72 bp | GTTTTGGACTTTCTCAGCAGGGAGAAGAAACACAGATaGCAGGTCTGGCAAGCGTCAATCAAGAGTGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VLDFLSREKKHR*QVWQASIKSGP Trigger: CGGACCACTCTTGATTGACGCTTGCCAGACCTGCAATCTGTGTTTCTTCTCCCTGCTGAGAAAGTCCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR TCA 90 bp | CATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTATTTACGGGGACATCGAAGTTaGGGTTGGTGTCTGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTGTVLASATGLRVSTYLRGHRS*GWCLIP Trigger: GGGGATCAGACACCAACCTCAACTTCGATGTCCCCG...TAAATAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | ATTCGTTTTCATTTCCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGGCGATGGAGTGGGCTaGCTTCTGGTTTTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IRFHFLNKLCSQIPTDPQGDGVG*LLVFLL Trigger: GAGAAGAAAAACCAGAAGTCAGCCCACTCCATCGCC...TTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTCATCTGGGTCAAGAGCTCCCACTACTCTTGCCACCATTTGATTAGACCTTCTGTTCGATCTCCCTaGGCTTTCTGTGATACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALIWVKSSHYSCHHLIRPSVRSP*AFCDTA Trigger: AGCAGTATCACAGAAAGCTCAGGGAGATCGAACAGA...AGGTCTAATCAAATGGTGGCAAGAGTAGTGGGAGCTCTTGACCCAGATGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | GTAGGGCACAGAGCCACCCATGGACAAGTAGGAGAGATCACAGAGAGACTCACTAGGGAATTCTTCAAGTaGGCAATGTTATCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VGHRATHGQVGEITERLTREFFK*AMLSAL Trigger: CAGTGCAGATAACATTGCTCACTTGAAGAATTCCCT...AGTGAGTCTCTCTGTGATCTCTCCTACTTGTCCATGGGTGGCTCTGTGCCCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGTCAGGGGGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGATCCTCTTGCAGAGTCTaGGAGATAAAGCCATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: CWSGGTQNTAVSNHGAQRSSCRV*EIKPYS Trigger: AGAATATGGCTTTATCTCTCAGACTCTGCAAGAGGA...TCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCCCCCTGACCAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | GGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAACAAGGGCTTTGCAGTTTCAGATACTCTaGAACGTTCCCATCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTQNTAVSNHGAQRTRALQFQIL*NVPISG Trigger: TCCCGAGATGGGAACGTTGCAGAGTATCTGAAACTG...CAAAGCCCTTGTTCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGTCAGGGGGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAGTGAGCAATGTTATCTaGACTGCCAAACTTATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CWSGGTQNTAVSNHGAQRVSNVI*TAKLIP Trigger: CGGAATAAGTTTGGCAGTGCAGATAACATTGCTCAC...TCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCCCCCTGACCAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCGTGTAGGAACAAAGCCATAGATAGGGGTGGTACTGGGAACTTCCCCATCGTGAGCAATGTTATCTaGACTGCCAAACTTATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPCRNKAIDRGGTGNFPIVSNVI*TAKLIP Trigger: CGGAATAAGTTTGGCAGTGCAGATAACATTGCTCAC...GATGGGGAAGTTCCCAGTACCACCCCTATCTATGGCTTTGTTCCTACACGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CCA 90 bp | GGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTTGTTTGAGTTTGACCTTGTaGAAATCCAGGATGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: GALGIRGKPGCKSQCLPCLSLTL*KSRMPS Trigger: CGATGGCATCCTGGATTTCCACAAGGTCAAACTCAA...ACAAGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | ACAATGGTGCTGGAGGCTTCTAACAGATTCTGTCCAAAGCTCAGTCTGAAGGGTTGTCCTTTGAGCTCCTaGTCACGCCATTCTGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TMVLEASNRFCPKLSLKGCPLSS*SRHSVR Trigger: TCGAACAGAATGGCGTGACCAGGAGCTCAAAGGACA...ACCCTTCAGACTGAGCTTTGGACAGAATCTGTTAGAAGCCTCCAGCACCATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR CCA 90 bp | AGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAACAAGGGCTTTGCTGTGCTGCATCCTTCAGAGAGTaGTGTATTTCCTTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTQQLAIMAPKEQGLCCAASFRE*CISFRL Trigger: CAGCCTGAAGGAAATACACCACTCTCTGAAGGATGC...AGCACAGCAAAGCCCTTGTTCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTCATCTGGGTCAAGAGCTCCCACTACTCTTGCCACCATTTGATTAGACCTGCATCCTTCAGAGAGTaGTGTATTTCCTTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALIWVKSSHYSCHHLIRPASFRE*CISFRL Trigger: CAGCCTGAAGGAAATACACCACTCTCTGAAGGATGC...AGGTCTAATCAAATGGTGGCAAGAGTAGTGGGAGCTCTTGACCCAGATGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | CTTAATTTTATTCCTGATGGCCTTTGCGTCCCTAAGGGACCCTCCTGCTCTCATGTTCGAGATTTCACGTaGGCATCCTTCAGAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNFIPDGLCVPKGPSCSHVRDFT*ASFREW Trigger: CCACTCTCTGAAGGATGCCCACGTGAAATCTCGAAC...ATGAGAGCAGGAGGGTCCCTTAGGGACGCAAAGGCCATCAGGAATAAAATTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAACATGTAAATCTCCCTCAGACTCCCAAGGAATTACACATCACTTCCAGTCCGCCAGCTGGGTTTaGGTAACCTTGATCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TATCKSPSDSQGITHHFQSASWV*VTLISL Trigger: GAGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGA...CTGGAAGTGATGTGTAATTCCTTGGGAGTCTGAGGGAGATTTACATGTTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR CCA 90 bp | GCTCTCATCTGGGTCAAGAGCTCCCACTACTCTTGCCACCATTTGATTAGACCTATTCCTGCTTCAGATTaGCTGTCTCATGCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALIWVKSSHYSCHHLIRPIPASD*LSHAGA Trigger: TGCACCAGCATGAGACAGCCAATCTGAAGCAGGAAT...AGGTCTAATCAAATGGTGGCAAGAGTAGTGGGAGCTCTTGACCCAGATGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | ATTCGTTTTCATTTCCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAAGCGGCTCTTCATCATaGGCGAGACAAACTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IRFHFLNKLCSQIPTDPQSGSSS*ARQTWP Trigger: TGGCCAAGTTTGTCTCGCCCATGATGAAGAGCCGCT...TTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTACATGTTCAAGAGAGTGAGAGTGGGGTTATAGCCCTTGAGAGAATGAAGGTTGAGGTTGGTGTCTaGTCCCCCTCGGCGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: MLHVQESESGVIALERMKVEVGV*SPSAYV Trigger: AACATACGCCGAGGGGGATCAGACACCAACCTCAAC...CTTCATTCTCTCAAGGGCTATAACCCCACTCTCACTCTCTTGAACATGTAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR TCA 90 bp | CACAATAAGAATCTTCTCTCTCCTCTTGGTGGCGTACACAGAAAACCAGGTTTGTGCTCCAACTTCTTCTaGAGTTGGGCGATGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HNKNLLSPLGGVHRKPGLCSNFF*SWAMEW Trigger: CCACTCCATCGCCCAACTTCAGAAGAAGTTGGAGCA...CAAACCTGGTTTTCTGTGTACGCCACCAAGAGGAGAGAGAAGATTCTTATTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR TCA 90 bp | TTAGACCTAAAAGTTCACATCCCTCTTAGGCCCCCAGTGTCCTGCCTCAGCACAAGGGAATTCTTCAAGTaGGCAATGTTATCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LDLKVHIPLRPPVSCLSTREFFK*AMLSAL Trigger: CAGTGCAGATAACATTGCTCACTTGAAGAATTCCCT...TGTGCTGAGGCAGGACACTGGGGGCCTAAGAGGGATGTGAACTTTTAGGTCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | TTAGACCTAAAAGTTCACATCCCTCTTAGGCCCCCAGTGTCCTGCCTCAGCACATCCTCTTGCAGAGTCTaGGAGATAAAGCCATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDLKVHIPLRPPVSCLSTSSCRV*EIKPYS Trigger: AGAATATGGCTTTATCTCTCAGACTCTGCAAGAGGA...TGTGCTGAGGCAGGACACTGGGGGCCTAAGAGGGATGTGAACTTTTAGGTCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGGCACAGAGCCACCCATGGACAAGTAGGAGAGATCACAGAGAGACTCACTCAATGTTATCTGCACTaGCAAACTTATTCCGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: VGHRATHGQVGEITERLTQCYLH*QTYSGS Trigger: TGATCCGGAATAAGTTTGGCAGTGCAGATAACATTG...AGTGAGTCTCTCTGTGATCTCTCCTACTTGTCCATGGGTGGCTCTGTGCCCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTGTGAGCAATGTTATCTaGACTGCCAAACTTATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CGALGIRGKPGCKSQCLPVSNVI*TAKLIP Trigger: CGGAATAAGTTTGGCAGTGCAGATAACATTGCTCAC...AGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | ACCACATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTAGTTCGAGATTTCACGTaGGCATCCTTCAGAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTYRDSVGICYWVKSLYLVRDFT*ASFREW Trigger: CCACTCTCTGAAGGATGCCCACGTGAAATCTCGAAC...TAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | ATTCGTTTTCATTTCCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAACGTGAGGGATACCCCTaGCATGCTAGATTTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IRFHFLNKLCSQIPTDPQREGYP*HARFTA Trigger: AGCAGTAAATCTAGCATGCCAGGGGTATCCCTCACG...TTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTTATTCCGGATCAAGTTaGCAAACTCTCTGGACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVYSGSS*QTLWTY Trigger: ATAAGTCCAGAGAGTTTGCCAACTTGATCCGGAATA...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | CATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTATTTATGGGCGAGACAAACTTaGCCAGGGTGGACACACACA | + |
|
Preference number: 4 (lower is better) Translates to: HTGTVLASATGLRVSTYLWARQT*PGWTHT Trigger: TGTGTGTGTCCACCCTGGCCAAGTTTGTCTCGCCCA...TAAATAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | TGGCACAGCCGTCCATTCAGAAATTTTGGTAGTATGCACAGGGTTTTCTTCAAATGGGCGAGACAAACTTaGCCAGGGTGGACACACACA | + |
|
Preference number: 4 (lower is better) Translates to: WHSRPFRNFGSMHRVFFKWARQT*PGWTHT Trigger: TGTGTGTGTCCACCCTGGCCAAGTTTGTCTCGCCCA...TTTGAAGAAAACCCTGTGCATACTACCAAAATTTCTGAATGGACGGCTGTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTACATGTTCAAGAGAGTGAGAGTGGGGTTATAGCCCTTGAGAGAATGAAGTGCTCCAACTTCTTCTaGAGTTGGGCGATGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MLHVQESESGVIALERMKCSNFF*SWAMEW Trigger: CCACTCCATCGCCCAACTTCAGAAGAAGTTGGAGCA...CTTCATTCTCTCAAGGGCTATAACCCCACTCTCACTCTCTTGAACATGTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR TCA 90 bp | ATTCGTTTTCATTTCCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAATCCCTGAGCTTTCTGTaGTACTGCTCCAACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IRFHFLNKLCSQIPTDPQSLSFL*YCSNFF Trigger: GAAGAAGTTGGAGCAGTATCACAGAAAGCTCAGGGA...TTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | ACCACATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTACAGTTTCAGATACTCTaGAACGTTCCCATCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TTYRDSVGICYWVKSLYLQFQIL*NVPISG Trigger: TCCCGAGATGGGAACGTTGCAGAGTATCTGAAACTG...TAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCACTAACCTCCAACTGGCTCTCAACACGAGGGATGCACGAGATGTCTACTCAATGTTATCTGCACTaGCAAACTTATTCCGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: CSLTSNWLSTRGMHEMSTQCYLH*QTYSGS Trigger: TGATCCGGAATAAGTTTGGCAGTGCAGATAACATTG...AGTAGACATCTCGTGCATCCCTCGTGTTGAGAGCCAGTTGGAGGTTAGTGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR GCA 90 bp | GCTCTCATCTGGGTCAAGAGCTCCCACTACTCTTGCCACCATTTGATTAGACCTTATTCTCTCTTAAACTaGACCTTCAGTGCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: ALIWVKSSHYSCHHLIRPYSLLN*TFSASM Trigger: CATCGAGGCACTGAAGGTGCAGTTTAAGAGAGAATA...AGGTCTAATCAAATGGTGGCAAGAGTAGTGGGAGCTCTTGACCCAGATGAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTTATTCCGGATCAAGTTaGCAAACTCTCTGGACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CGALGIRGKPGCKSQCLPYSGSS*QTLWTY Trigger: ATAAGTCCAGAGAGTTTGCCAACTTGATCCGGAATA...AGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | TGGCACAGCCGTCCATTCAGAAATTTTGGTAGTATGCACAGGGTTTTCTTCAAATTGGCTGTCTCATGCTaGTGCAGCTCTGTCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WHSRPFRNFGSMHRVFFKLAVSC*CSSVRS Trigger: TGACCTGACAGAGCTGCACCAGCATGAGACAGCCAA...TTTGAAGAAAACCCTGTGCATACTACCAAAATTTCTGAATGGACGGCTGTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGGCACAGAGCCACCCATGGACAAGTAGGAGAGATCACAGAGAGACTCACTAGTTTTTACAGAATATaGCGAGAAGAGTCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGHRATHGQVGEITERLTSFYRI*REESQQ Trigger: TTGCTGTGACTCTTCTCGCCATATTCTGTAAAAACT...AGTGAGTCTCTCTGTGATCTCTCCTACTTGTCCATGGGTGGCTCTGTGCCCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | AGCAACTCCACTCCAGCGCAGGACTTAATTTTATTCCTGATGGCCTTTGCGTCCCAATGTTATCTGCACTaGCAAACTTATTCCGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SNSTPAQDLILFLMAFASQCYLH*QTYSGS Trigger: TGATCCGGAATAAGTTTGGCAGTGCAGATAACATTG...GGACGCAAAGGCCATCAGGAATAAAATTAAGTCCTGCGCTGGAGTGGAGTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CCA 90 bp | ACCACATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTATTGAGTTTGACCTTGTaGAAATCCAGGATGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: TTYRDSVGICYWVKSLYLLSLTL*KSRMPS Trigger: CGATGGCATCCTGGATTTCCACAAGGTCAAACTCAA...TAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCTCTTAAGGTTGCATTCAAACTCTTTCTGAAACCTGCTAGCGGCATTCACGTCAGGTCATGGAGCTaGTCTTCAAGTCGCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: KSLKVAFKLFLKPASGIHVRSWS*SSSRSY Trigger: GTATGAGCGACTTGAAGACCAGCTCCATGACCTGAC...GTGAATGCCGCTAGCAGGTTTCAGAAAGAGTTTGAATGCAACCTTAAGAGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR CCA 90 bp | CACAATAAGAATCTTCTCTCTCCTCTTGGTGGCGTACACAGAAAACCAGGTTTGATTCCTGCTTCAGATTaGCTGTCTCATGCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HNKNLLSPLGGVHRKPGLIPASD*LSHAGA Trigger: TGCACCAGCATGAGACAGCCAATCTGAAGCAGGAAT...CAAACCTGGTTTTCTGTGTACGCCACCAAGAGGAGAGAGAAGATTCTTATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CCA 90 bp | TGGCACAGCCGTCCATTCAGAAATTTTGGTAGTATGCACAGGGTTTTCTTCAAATTAGAGATGCGGGTCTaGCAAGATTCCAAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WHSRPFRNFGSMHRVFFKLEMRV*QDSKAS Trigger: GGAAGCCTTGGAATCTTGCCAGACCCGCATCTCTAA...TTTGAAGAAAACCCTGTGCATACTACCAAAATTTCTGAATGGACGGCTGTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | CATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTATTTATTAGAGATGCGGGTCTaGCAAGATTCCAAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTGTVLASATGLRVSTYLLEMRV*QDSKAS Trigger: GGAAGCCTTGGAATCTTGCCAGACCCGCATCTCTAA...TAAATAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | CATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTATTTATCCCTGAGCTTTCTGTaGTACTGCTCCAACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTGTVLASATGLRVSTYLSLSFL*YCSNFF Trigger: GAAGAAGTTGGAGCAGTATCACAGAAAGCTCAGGGA...TAAATAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | CATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTATTTATCTGTTCGATCTCCCTaGGCTTTCTGTGATACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTGTVLASATGLRVSTYLSVRSP*AFCDTA Trigger: AGCAGTATCACAGAAAGCTCAGGGAGATCGAACAGA...TAAATAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | ACCACATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTATCCTCTTGCAGAGTCTaGGAGATAAAGCCATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTYRDSVGICYWVKSLYLSSCRV*EIKPYS Trigger: AGAATATGGCTTTATCTCTCAGACTCTGCAAGAGGA...TAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | CATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTATTTACAGTTTCAGATACTCTaGAACGTTCCCATCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HTGTVLASATGLRVSTYLQFQIL*NVPISG Trigger: TCCCGAGATGGGAACGTTGCAGAGTATCTGAAACTG...TAAATAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | ACCACATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTATATTCTCTCTTAAACTaGACCTTCAGTGCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TTYRDSVGICYWVKSLYLYSLLN*TFSASM Trigger: CATCGAGGCACTGAAGGTGCAGTTTAAGAGAGAATA...TAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | TGGCACAGCCGTCCATTCAGAAATTTTGGTAGTATGCACAGGGTTTTCTTCAAAGCATCCTTCAGAGAGTaGTGTATTTCCTTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WHSRPFRNFGSMHRVFFKASFRE*CISFRL Trigger: CAGCCTGAAGGAAATACACCACTCTCTGAAGGATGC...TTTGAAGAAAACCCTGTGCATACTACCAAAATTTCTGAATGGACGGCTGTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | AGCAACTCCACTCCAGCGCAGGACTTAATTTTATTCCTGATGGCCTTTGCGTCCATGGCACACAAGATATaGTCCCAGTTTTTACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SNSTPAQDLILFLMAFASMAHKI*SQFLQN Trigger: ATTCTGTAAAAACTGGGACCATATCTTGTGTGCCAT...GGACGCAAAGGCCATCAGGAATAAAATTAAGTCCTGCGCTGGAGTGGAGTTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGTAAAGTGAATCACATGGCACACAAGATATaGTCCCAGTTTTTACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PEQALQSDPHRPASKVNHMAHKI*SQFLQN Trigger: ATTCTGTAAAAACTGGGACCATATCTTGTGTGCCAT...GTGATTCACTTTACTTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | GAGAATGAAGAACTGTTGAGTCAAAGTCTCCTTGAACTATACACTCTTGCTAAAGGCGATGGAGTGGGCTaGCTTCTGGTTTTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ENEELLSQSLLELYTLAKGDGVG*LLVFLL Trigger: GAGAAGAAAAACCAGAAGTCAGCCCACTCCATCGCC...TTTAGCAAGAGTGTATAGTTCAAGGAGACTTTGACTCAACAGTTCTTCATTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR TCA 90 bp | CACAATAAGAATCTTCTCTCTCCTCTTGGTGGCGTACACAGAAAACCAGGTTTGAGGGAATTCTTCAAGTaGGCAATGTTATCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: HNKNLLSPLGGVHRKPGLREFFK*AMLSAL Trigger: CAGTGCAGATAACATTGCTCACTTGAAGAATTCCCT...CAAACCTGGTTTTCTGTGTACGCCACCAAGAGGAGAGAGAAGATTCTTATTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR GCA 90 bp | ACCACATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTACAATGTTATCTGCACTaGCAAACTTATTCCGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TTYRDSVGICYWVKSLYLQCYLH*QTYSGS Trigger: TGATCCGGAATAAGTTTGGCAGTGCAGATAACATTG...TAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | ATTCGTTTTCATTTCCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAATATTCCGGATCAAGTTaGCAAACTCTCTGGACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: IRFHFLNKLCSQIPTDPQYSGSS*QTLWTY Trigger: ATAAGTCCAGAGAGTTTGCCAACTTGATCCGGAATA...TTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CCA 90 bp | CTTAATTTTATTCCTGATGGCCTTTGCGTCCCTAAGGGACCCTCCTGCTCTCATAGTTTTTACAGAATATaGCGAGAAGAGTCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LNFIPDGLCVPKGPSCSHSFYRI*REESQQ Trigger: TTGCTGTGACTCTTCTCGCCATATTCTGTAAAAACT...ATGAGAGCAGGAGGGTCCCTTAGGGACGCAAAGGCCATCAGGAATAAAATTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| 3UTR CAA 72 bp | AATGAGCATCTAAGCTCTTTAGAAGGAATCCAAGATTaGGAGGCCCCACCCCTACCTCCATTAATTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: NEHLSSLEGIQD*EAPPLPPLIHN Trigger: ATTGTGAATTAATGGAGGTAGGGGTGGGGCCTCCAAATCTTGGATTCCTTCTAAAGAGCTTAGATGCTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR TCA 90 bp | TGGCACAGCCGTCCATTCAGAAATTTTGGTAGTATGCACAGGGTTTTCTTCAAAAGGGAATTCTTCAAGTaGGCAATGTTATCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: WHSRPFRNFGSMHRVFFKREFFK*AMLSAL Trigger: CAGTGCAGATAACATTGCTCACTTGAAGAATTCCCT...TTTGAAGAAAACCCTGTGCATACTACCAAAATTTCTGAATGGACGGCTGTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR TCA 90 bp | GAGAATGAAGAACTGTTGAGTCAAAGTCTCCTTGAACTATACACTCTTGCTAAATCTGTTCGATCTCCCTaGGCTTTCTGTGATACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ENEELLSQSLLELYTLAKSVRSP*AFCDTA Trigger: AGCAGTATCACAGAAAGCTCAGGGAGATCGAACAGA...TTTAGCAAGAGTGTATAGTTCAAGGAGACTTTGACTCAACAGTTCTTCATTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR CCA 90 bp | CATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTATTTAATGGCACACAAGATATaGTCCCAGTTTTTACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HTGTVLASATGLRVSTYLMAHKI*SQFLQN Trigger: ATTCTGTAAAAACTGGGACCATATCTTGTGTGCCAT...TAAATAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR GCA 90 bp | GAGAATGAAGAACTGTTGAGTCAAAGTCTCCTTGAACTATACACTCTTGCTAAAGTGAGCAATGTTATCTaGACTGCCAAACTTATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ENEELLSQSLLELYTLAKVSNVI*TAKLIP Trigger: CGGAATAAGTTTGGCAGTGCAGATAACATTGCTCAC...TTTAGCAAGAGTGTATAGTTCAAGGAGACTTTGACTCAACAGTTCTTCATTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR CAA 72 bp | TTCCAGGGTACCTCACAGCTCTATTGCTACCGCCAATaGTATATTTATAGAACTCATTTCTTCAGTATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FQGTSQLYCYRQ*YIYRTHFFSMY Trigger: ATACATACTGAAGAAATGAGTTCTATAAATATACAATTGGCGGTAGCAATAGAGCTGTGAGGTACCCTGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| 3UTR CAA 72 bp | AAGGTCAGAATTAAGAAAACGTCCAAAATAGGTTGTTaGATCACACACGTTCTTATCAATGAGTACGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KVRIKKTSKIGC*ITHVLINEYVC Trigger: ACAAACGTACTCATTGATAAGAACGTGTGTGATCAAACAACCTATTTTGGACGTTTTCTTAATTCTGACCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| CDS TCA 90 bp | ATGGCGGTCCACCCGGCTCTTGCAGCGGTGGTGCCGGCCGGGGTCTaGGTAGGTCCGGTCCACGGTGAGCGCCGTGTCGCTGCCCGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: MAVHPALAAVVPAGV*VGPVHGERRVAARH Trigger: ATGCCGGGCAGCGACACGGCGCTCACCGTGGACCGGACCTACTCAGACCCCGGCCGGCACCACCGCTGCAAGAGCCGGGTGGACCGCCAT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| CDS-3UTR CAA 90 bp | ACGCACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTCTTCCTGGATGTCCCTaGAGCGCTCATAGGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: THCLPRDARRTLSYPSYSLPGCP*SAHRPG Trigger: ACCAGGCCTATGAGCGCTCAAGGGACATCCAGGAAG...ACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS TCA 90 bp | GCTGGTCCCACCAGCCCCAAAGGACTGGTTCCCATTGCTGTCCGCTaGGCCGGATGTGCCACTAGAACATTCGTCATCGCTGCCGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: AGPTSPKGLVPIAVR*AGCATRTFVIAAVL Trigger: AAGTACGGCAGCGATGACGAATGTTCTAGTGGCACATCCGGCTCAGCGGACAGCAATGGGAACCAGTCCTTTGGGGCTGGTGGGACCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS-3UTR CAA 90 bp | ATTCGTTTTCATTTCCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAACGGTCCACCCGGCTCTaGCAGCGGTGGTGCCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: IRFHFLNKLCSQIPTDPQRSTRL*QRWCRP Trigger: CGGCCGGCACCACCGCTGCAAGAGCCGGGTGGACCG...TTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| CDS-3UTR CAA 90 bp | ACGCACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTACATCGAAGTTGAGGTaGGTGTCTGATCCCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: THCLPRDARRTLSYPSYSTSKLR*VSDPPR Trigger: CCGAGGGGGATCAGACACCAACCTCAACTTCGATGT...ACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTGCGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS-3UTR CAA 90 bp | CCAAAGAACAAGGGCTTTGCTGTGCTGAGCTCAACAGGTGGGCTCGAGATCGGCCGTCCAGCCTGCTGCTaGTCTGCACTGCTGACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PKNKGFAVLSSTGGLEIGRPACC*SALLTS Trigger: ACTGGTCAGCAGTGCAGACAAGCAGCAGGCTGGACG...GCCGATCTCGAGCCCACCTGTTGAGCTCAGCACAGCAAAGCCCTTGTTCTTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS TCA 90 bp | ACCTTGGCGTTCACGGCATCCGTCTGCAGGGTCTGCTGTTCCTGCTaGTGCAGCTCGAGCTTAGAGATGCGGGTCTGGCAAGATTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TLAFTASVCRVCCSC*CSSSLEMRVWQDSK Trigger: CTTGGAATCTTGCCAGACCCGCATCTCTAAGCTCGAGCTGCATCAGCAGGAACAGCAGACCCTGCAGACGGATGCCGTGAACGCCAAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS-3UTR CAA 90 bp | CACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTTTGTCGGGGACATCGAAGTaGAGGTTGGTGTCTGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: HCLPRDARRTLSYPSYSLSGTSK*RLVSDP Trigger: GGGATCAGACACCAACCTCAACTTCGATGTCCCCGA...CAAACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS-3UTR CAA 90 bp | ATGGCAGCCATCGAACAAGACACAGCAGCTCTTGCAGGCTCTCTGCTCATGGGGCTTCCTGGATGTCCCTaGAGCGCTCATAGGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: MAAIEQDTAALAGSLLMGLPGCP*SAHRPG Trigger: ACCAGGCCTATGAGCGCTCAAGGGACATCCAGGAAG...CCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| CDS-3UTR CAA 90 bp | ATGGCAGCCATCGAACAAGACACAGCAGCTCTTGCAGGCTCTCTGCTCATGGGGACATCGAAGTTGAGGTaGGTGTCTGATCCCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: MAAIEQDTAALAGSLLMGTSKLR*VSDPPR Trigger: CCGAGGGGGATCAGACACCAACCTCAACTTCGATGT...CCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| CDS-3UTR CAA 90 bp | GTAGGGCACAGAGCCACCCATGGACAAGTAGGAGAGATCACAGAGAGACTCACTCGTCCAGCCTGCTGCTaGTCTGCACTGCTGACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VGHRATHGQVGEITERLTRPACC*SALLTS Trigger: ACTGGTCAGCAGTGCAGACAAGCAGCAGGCTGGACG...AGTGAGTCTCTCTGTGATCTCTCCTACTTGTCCATGGGTGGCTCTGTGCCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCGAGATCGGCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGATGGGTTTGGGTAACCTaGATCTCCCTCAGTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSRSALIKAVSPLRRTLGWVWVT*ISLSSS Trigger: GGAGGAACTGAGGGAGATCAAGGTTACCCAAACCCA...TCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGCCGATCTCGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CCA 90 bp | GTGAGGGATACCCCTGGCATGCTAGATTTACTGCTCTCCAGGCAGTaGGGAGCAGTTCGAGATTTCACGTGGGCATCCTTCAGAGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VRDTPGMLDLLLSRQ*GAVRDFTWASFREW Trigger: CCACTCTCTGAAGGATGCCCACGTGAAATCTCGAACTGCTCCCCACTGCCTGGAGAGCAGTAAATCTAGCATGCCAGGGGTATCCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | CACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTTTGCTCAGGCTGTCCGCATaGAGTTTGACCTTGTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: HCLPRDARRTLSYPSYSLLRLSA*SLTLWK Trigger: TTTCCACAAGGTCAAACTCAATGCGGACAGCCTGAG...CAAACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | CCAAAGAACAAGGGCTTTGCTGTGCTGAGCTCAACAGGTGGGCTCGAGATCGGCAGTTCCTCCATGATCTaGGCAATCTTCCCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PKNKGFAVLSSTGGLEIGSSSMI*AIFPWL Trigger: CAGCCAGGGGAAGATTGCCAAGATCATGGAGGAACT...GCCGATCTCGAGCCCACCTGTTGAGCTCAGCACAGCAAAGCCCTTGTTCTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTCTTCCTGGATGTCCCTaGAGCGCTCATAGGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVLPGCP*SAHRPG Trigger: ACCAGGCCTATGAGCGCTCAAGGGACATCCAGGAAG...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | GTAGGGCACAGAGCCACCCATGGACAAGTAGGAGAGATCACAGAGAGACTCACTCTTCCTGGATGTCCCTaGAGCGCTCATAGGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VGHRATHGQVGEITERLTLPGCP*SAHRPG Trigger: ACCAGGCCTATGAGCGCTCAAGGGACATCCAGGAAG...AGTGAGTCTCTCTGTGATCTCTCCTACTTGTCCATGGGTGGCTCTGTGCCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | GTAGGGCACAGAGCCACCCATGGACAAGTAGGAGAGATCACAGAGAGACTCACTATGGGCGAGACAAACTaGGCCAGGGTGGACACACAC | + |
|
Preference number: 5 (lower is better) Translates to: VGHRATHGQVGEITERLTMGETN*ARVDTH Trigger: GTGTGTGTCCACCCTGGCCAAGTTTGTCTCGCCCAT...AGTGAGTCTCTCTGTGATCTCTCCTACTTGTCCATGGGTGGCTCTGTGCCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS CCA 90 bp | CAGAATATGGCGAGAAGAGTCACAGCAAAGAAGGTGCCAAGGATGTaGGAGCGGCTCTTCATCATGGGCGAGACAAACTTGGCCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QNMARRVTAKKVPRM*ERLFIMGETNLARV Trigger: CACCCTGGCCAAGTTTGTCTCGCCCATGATGAAGAGCCGCTCCCACATCCTTGGCACCTTCTTTGCTGTGACTCTTCTCGCCATATTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | CCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGTAAAGTGAATCACCGTCCAGCCTGCTGCTaGTCTGCACTGCTGACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PEQALQSDPHRPASKVNHRPACC*SALLTS Trigger: ACTGGTCAGCAGTGCAGACAAGCAGCAGGCTGGACG...GTGATTCACTTTACTTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCAGCCATCGAACAAGACACAGCAGCTCTTGCAGGCTCTCTGCTCATGGGGAATTCCTGCTTCAGATaGGCTGTCTCATGCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: MAAIEQDTAALAGSLLMGNSCFR*AVSCWC Trigger: GCACCAGCATGAGACAGCCAATCTGAAGCAGGAATT...CCCCATGAGCAGAGAGCCTGCAAGAGCTGCTGTGTCTTGTTCGATGGCTGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CAA 90 bp | GGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTTGTATGGGCGAGACAAACTaGGCCAGGGTGGACACACAC | + |
|
Preference number: 5 (lower is better) Translates to: GALGIRGKPGCKSQCLPCMGETN*ARVDTH Trigger: GTGTGTGTCCACCCTGGCCAAGTTTGTCTCGCCCAT...ACAAGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTTCGGGGACATCGAAGTaGAGGTTGGTGTCTGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: CGALGIRGKPGCKSQCLPSGTSK*RLVSDP Trigger: GGGATCAGACACCAACCTCAACTTCGATGTCCCCGA...AGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | ACGCACTGCCTCCCCAGGGATGCTCGCAGGACCCTGAGTTACCCAAGCTACAGTTTATTCCGGATCAAGTaGGCAAACTCTCTGGACTTA | + |
|
Preference number: 5 (lower is better) Translates to: THCLPRDARRTLSYPSYSLFRIK*ANSLDL Trigger: TAAGTCCAGAGAGTTTGCCAACTTGATCCGGAATAA...ACTGTAGCTTGGGTAACTCAGGGTCCTGCGAGCATCCCTGGGGAGGCAGTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | AGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAACAAGGGCTTTGCTGTGCTAAGGACTGGTTCCCATaGCTGTCCGCTGAGCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RTQQLAIMAPKEQGLCCAKDWFP*LSAEPD Trigger: ATCCGGCTCAGCGGACAGCAATGGGAACCAGTCCTT...AGCACAGCAAAGCCCTTGTTCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | ACCTCAGAGCTTATCTGTGTACCTAAGAGACAGACAGCAGCAACTCCACTCCAGAAGGACTGGTTCCCATaGCTGTCCGCTGAGCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TSELICVPKRQTAATPLQKDWFP*LSAEPD Trigger: ATCCGGCTCAGCGGACAGCAATGGGAACCAGTCCTT...CTGGAGTGGAGTTGCTGCTGTCTGTCTCTTAGGTACACAGATAAGCTCTGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CAA 90 bp | CCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGTAAAGTGAATCACAAGGACTGGTTCCCATaGCTGTCCGCTGAGCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PEQALQSDPHRPASKVNHKDWFP*LSAEPD Trigger: ATCCGGCTCAGCGGACAGCAATGGGAACCAGTCCTT...GTGATTCACTTTACTTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGGTCAGGGGGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAAGTTCCTCCATGATCTaGGCAATCTTCCCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CWSGGTQNTAVSNHGAQRSSSMI*AIFPWL Trigger: CAGCCAGGGGAAGATTGCCAAGATCATGGAGGAACT...TCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCCCCCTGACCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGGTCAGGGGGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGATGGGTTTGGGTAACCTaGATCTCCCTCAGTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CWSGGTQNTAVSNHGAQRWVWVT*ISLSSS Trigger: GGAGGAACTGAGGGAGATCAAGGTTACCCAAACCCA...TCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCCCCCTGACCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTTGGGTTTGGGTAACCTaGATCTCCCTCAGTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVWVWVT*ISLSSS Trigger: GGAGGAACTGAGGGAGATCAAGGTTACCCAAACCCA...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTTTCCGCCAGCTGGGTTaGGGTAACCTTGATCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CGALGIRGKPGCKSQCLPFRQLG*GNLDLP Trigger: AGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGAA...AGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS CCA 90 bp | TGCTTCAGATTGGCTGTCTCATGCTGGTGCAGCTCTGTCAGGTCATaGAGCTGGTCTTCAAGTCGCTCATACCTGTATCTCTCCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CFRLAVSCWCSSVRS*SWSSSRSYLYLSSC Trigger: GCAAGAGGAGAGATACAGGTATGAGCGACTTGAAGACCAGCTCCATGACCTGACAGAGCTGCACCAGCATGAGACAGCCAATCTGAAGCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | AGCAACTCCACTCCAGCGCAGGACTTAATTTTATTCCTGATGGCCTTTGCGTCCACATCGAAGTTGAGGTaGGTGTCTGATCCCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SNSTPAQDLILFLMAFASTSKLR*VSDPPR Trigger: CCGAGGGGGATCAGACACCAACCTCAACTTCGATGT...GGACGCAAAGGCCATCAGGAATAAAATTAAGTCCTGCGCTGGAGTGGAGTTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CAA 90 bp | GGAACTCAGAACACAGCAGTTAGCAATCATGGCGCCCAAAGAACAAGGGCTTTGACATCGAAGTTGAGGTaGGTGTCTGATCCCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GTQNTAVSNHGAQRTRALTSKLR*VSDPPR Trigger: CCGAGGGGGATCAGACACCAACCTCAACTTCGATGT...CAAAGCCCTTGTTCTTTGGGCGCCATGATTGCTAACTGCTGTGTTCTGAGTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS-3UTR CAA 90 bp | AGCAACTCCACTCCAGCGCAGGACTTAATTTTATTCCTGATGGCCTTTGCGTCCTCGGGGACATCGAAGTaGAGGTTGGTGTCTGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: SNSTPAQDLILFLMAFASSGTSK*RLVSDP Trigger: GGGATCAGACACCAACCTCAACTTCGATGTCCCCGA...GGACGCAAAGGCCATCAGGAATAAAATTAAGTCCTGCGCTGGAGTGGAGTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| CDS-3UTR CAA 90 bp | TGTGGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTAGTTCCTCCATGATCTaGGCAATCTTCCCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CGALGIRGKPGCKSQCLPSSSMI*AIFPWL Trigger: CAGCCAGGGGAAGATTGCCAAGATCATGGAGGAACT...AGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | CCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGTAAAGTGAATCACTTCCGCCAGCTGGGTTaGGGTAACCTTGATCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PEQALQSDPHRPASKVNHFRQLG*GNLDLP Trigger: AGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGAA...GTGATTCACTTTACTTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CCA 90 bp | TTAAACTGCACCTTCAGTGCCTCGATGTCTTCCGCCAGCTGGGTTTaGGTAACCTTGATCTCCCTCAGTTCCTCCATGATCTTGGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LNCTFSASMSSASWV*VTLISLSSSMILAI Trigger: GATTGCCAAGATCATGGAGGAACTGAGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGAAGACATCGAGGCACTGAAGGTGCAGTTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CCA 90 bp | TCTCTCTTAAACTGCACCTTCAGTGCCTCGATGTCTTCCGCCAGCTaGGTTTGGGTAACCTTGATCTCCCTCAGTTCCTCCATGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLNCTFSASMSSAS*VWVTLISLSSSMIL Trigger: CAAGATCATGGAGGAACTGAGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGAAGACATCGAGGCACTGAAGGTGCAGTTTAAGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS-3UTR CAA 90 bp | CTTAATTTTATTCCTGATGGCCTTTGCGTCCCTAAGGGACCCTCCTGCTCTCATTCGGGGACATCGAAGTaGAGGTTGGTGTCTGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LNFIPDGLCVPKGPSCSHSGTSK*RLVSDP Trigger: GGGATCAGACACCAACCTCAACTTCGATGTCCCCGA...ATGAGAGCAGGAGGGTCCCTTAGGGACGCAAAGGCCATCAGGAATAAAATTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS-3UTR CAA 90 bp | GGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTTGTCTCAGGCTGTCCGCATaGAGTTTGACCTTGTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GALGIRGKPGCKSQCLPCLRLSA*SLTLWK Trigger: TTTCCACAAGGTCAAACTCAATGCGGACAGCCTGAG...ACAAGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCAACATGTAAATCTCCCTCAGACTCCCAAGGAATTACACATCACTTCCAGCGTCCAGCCTGCTGCTaGTCTGCACTGCTGACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TATCKSPSDSQGITHHFQRPACC*SALLTS Trigger: ACTGGTCAGCAGTGCAGACAAGCAGCAGGCTGGACG...CTGGAAGTGATGTGTAATTCCTTGGGAGTCTGAGGGAGATTTACATGTTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| CDS-3UTR CAA 90 bp | CCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAGTAAAGTGAATCACTGGGTTTGGGTAACCTaGATCTCCCTCAGTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PEQALQSDPHRPASKVNHWVWVT*ISLSSS Trigger: GGAGGAACTGAGGGAGATCAAGGTTACCCAAACCCA...GTGATTCACTTTACTTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS-3UTR CAA 90 bp | ATTCGTTTTCATTTCCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAAATGGGCGAGACAAACTaGGCCAGGGTGGACACACAC | + |
|
Preference number: 5 (lower is better) Translates to: IRFHFLNKLCSQIPTDPQMGETN*ARVDTH Trigger: GTGTGTGTCCACCCTGGCCAAGTTTGTCTCGCCCAT...TTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS TCA 90 bp | AGATGTCCTTTGAGCTCCTGGTCACGCCATTCTGTTCGATCTCCCTaGGCTTTCTGTGATACTGCTCCAACTTCTTCTGAAGTTGGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RCPLSSWSRHSVRSP*AFCDTAPTSSEVGR Trigger: TCGCCCAACTTCAGAAGAAGTTGGAGCAGTATCACAGAAAGCTCAGGGAGATCGAACAGAATGGCGTGACCAGGAGCTCAAAGGACATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 ENSMUST00000148823.3 |
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| CDS GCA 90 bp | CCCAGTTTTTACAGAATATGGCGAGAAGAGTCACAGCAAAGAAGGTaGCAAGGATGTGGGAGCGGCTCTTCATCATGGGCGAGACAAACT | + |
|
Preference number: 5 (lower is better) Translates to: PSFYRIWREESQQRR*QGCGSGSSSWARQT Trigger: AGTTTGTCTCGCCCATGATGAAGAGCCGCTCCCACATCCTTGGCACCTTCTTTGCTGTGACTCTTCTCGCCATATTCTGTAAAAACTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CCA 90 bp | GATTTACTGCTCTCCAGGCAGTGGGGAGCAGTTCGAGATTTCACGTaGGCATCCTTCAGAGAGTGGTGTATTTCCTTCAGGCTGTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: DLLLSRQWGAVRDFT*ASFREWCISFRLSL Trigger: TAAAGACAGCCTGAAGGAAATACACCACTCTCTGAAGGATGCCCACGTGAAATCTCGAACTGCTCCCCACTGCCTGGAGAGCAGTAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 ENSMUST00000148823.3 |
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| CDS-3UTR CAA 90 bp | ACCACATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTATTCCGCCAGCTGGGTTaGGGTAACCTTGATCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TTYRDSVGICYWVKSLYLFRQLG*GNLDLP Trigger: AGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGAA...TAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTGATTAAGGCAGTGAGCCCCTTGAGGAGGACTCTGGGACAGTTTCACGTTCCTGTATCTCTCCTCTaGCAGAGTCTGAGAGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: ALIKAVSPLRRTLGQFHVPVSLL*QSLRDK Trigger: TTTATCTCTCAGACTCTGCAAGAGGAGAGATACAGG...AACGTGAAACTGTCCCAGAGTCCTCCTCAAGGGGCTCACTGCCTTAATCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTCATCTGGGTCAAGAGCTCCCACTACTCTTGCCACCATTTGATTAGACCTAATTCCTGCTTCAGATaGGCTGTCTCATGCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALIWVKSSHYSCHHLIRPNSCFR*AVSCWC Trigger: GCACCAGCATGAGACAGCCAATCTGAAGCAGGAATT...AGGTCTAATCAAATGGTGGCAAGAGTAGTGGGAGCTCTTGACCCAGATGAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS-3UTR CAA 90 bp | ACCTCAGAGCTTATCTGTGTACCTAAGAGACAGACAGCAGCAACTCCACTCCAGAATTCCTGCTTCAGATaGGCTGTCTCATGCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSELICVPKRQTAATPLQNSCFR*AVSCWC Trigger: GCACCAGCATGAGACAGCCAATCTGAAGCAGGAATT...CTGGAGTGGAGTTGCTGCTGTCTGTCTCTTAGGTACACAGATAAGCTCTGAGGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
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| CDS-3UTR CAA 90 bp | CACAATAAGAATCTTCTCTCTCCTCTTGGTGGCGTACACAGAAAACCAGGTTTGATGGGCGAGACAAACTaGGCCAGGGTGGACACACAC | + |
|
Preference number: 5 (lower is better) Translates to: HNKNLLSPLGGVHRKPGLMGETN*ARVDTH Trigger: GTGTGTGTCCACCCTGGCCAAGTTTGTCTCGCCCAT...CAAACCTGGTTTTCTGTGTACGCCACCAAGAGGAGAGAGAAGATTCTTATTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CAA 90 bp | CTTAATTTTATTCCTGATGGCCTTTGCGTCCCTAAGGGACCCTCCTGCTCTCATCTCAGGCTGTCCGCATaGAGTTTGACCTTGTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LNFIPDGLCVPKGPSCSHLRLSA*SLTLWK Trigger: TTTCCACAAGGTCAAACTCAATGCGGACAGCCTGAG...ATGAGAGCAGGAGGGTCCCTTAGGGACGCAAAGGCCATCAGGAATAAAATTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS-3UTR CAA 90 bp | TGGCACAGCCGTCCATTCAGAAATTTTGGTAGTATGCACAGGGTTTTCTTCAAAAAGGACTGGTTCCCATaGCTGTCCGCTGAGCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: WHSRPFRNFGSMHRVFFKKDWFP*LSAEPD Trigger: ATCCGGCTCAGCGGACAGCAATGGGAACCAGTCCTT...TTTGAAGAAAACCCTGTGCATACTACCAAAATTTCTGAATGGACGGCTGTGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | CACAATAAGAATCTTCTCTCTCCTCTTGGTGGCGTACACAGAAAACCAGGTTTGTTCCGCCAGCTGGGTTaGGGTAACCTTGATCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HNKNLLSPLGGVHRKPGLFRQLG*GNLDLP Trigger: AGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGAA...CAAACCTGGTTTTCTGTGTACGCCACCAAGAGGAGAGAGAAGATTCTTATTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 |
||
| CDS-3UTR CAA 90 bp | TGTGGTGCTCTGGGCATAAGAGGAAAGCCTGGCTGTAAATCCCAGTGTCTACCTCCTGTATCTCTCCTCTaGCAGAGTCTGAGAGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: CGALGIRGKPGCKSQCLPPVSLL*QSLRDK Trigger: TTTATCTCTCAGACTCTGCAAGAGGAGAGATACAGG...AGGTAGACACTGGGATTTACAGCCAGGCTTTCCTCTTATGCCCAGAGCACCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | ATTCGTTTTCATTTCCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAACTCAGGCTGTCCGCATaGAGTTTGACCTTGTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IRFHFLNKLCSQIPTDPQLRLSA*SLTLWK Trigger: TTTCCACAAGGTCAAACTCAATGCGGACAGCCTGAG...TTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | TTAGACCTAAAAGTTCACATCCCTCTTAGGCCCCCAGTGTCCTGCCTCAGCACATTATTCCGGATCAAGTaGGCAAACTCTCTGGACTTA | + |
|
Preference number: 5 (lower is better) Translates to: LDLKVHIPLRPPVSCLSTLFRIK*ANSLDL Trigger: TAAGTCCAGAGAGTTTGCCAACTTGATCCGGAATAA...TGTGCTGAGGCAGGACACTGGGGGCCTAAGAGGGATGTGAACTTTTAGGTCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS CCA 90 bp | TCCTTTCTATGGCACACAAGATATGGTCCCAGTTTTTACAGAATATaGCGAGAAGAGTCACAGCAAAGAAGGTGCCAAGGATGTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFLWHTRYGPSFYRI*REESQQRRCQGCGS Trigger: GCTCCCACATCCTTGGCACCTTCTTTGCTGTGACTCTTCTCGCCATATTCTGTAAAAACTGGGACCATATCTTGTGTGCCATAGAAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCAAAGCTCAGTCTGAAGGGTGTGGAGTGTGCTGTTTTGGACTTTCTCAGCTTATTCCGGATCAAGTaGGCAAACTCTCTGGACTTA | + |
|
Preference number: 5 (lower is better) Translates to: CPKLSLKGVECAVLDFLSLFRIK*ANSLDL Trigger: TAAGTCCAGAGAGTTTGCCAACTTGATCCGGAATAA...GCTGAGAAAGTCCAAAACAGCACACTCCACACCCTTCAGACTGAGCTTTGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
||
| CDS-3UTR CAA 90 bp | ATTCGTTTTCATTTCCTGAACAAGCTTTGCAGTCAGATCCCCACAGACCCGCAACCTGTATCTCTCCTCTaGCAGAGTCTGAGAGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: IRFHFLNKLCSQIPTDPQPVSLL*QSLRDK Trigger: TTTATCTCTCAGACTCTGCAAGAGGAGAGATACAGG...TTGCGGGTCTGTGGGGATCTGACTGCAAAGCTTGTTCAGGAAATGAAAACGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS-3UTR CAA 90 bp | TGGCACAGCCGTCCATTCAGAAATTTTGGTAGTATGCACAGGGTTTTCTTCAAAAATTCCTGCTTCAGATaGGCTGTCTCATGCTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: WHSRPFRNFGSMHRVFFKNSCFR*AVSCWC Trigger: GCACCAGCATGAGACAGCCAATCTGAAGCAGGAATT...TTTGAAGAAAACCCTGTGCATACTACCAAAATTTCTGAATGGACGGCTGTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS-3UTR CAA 90 bp | ACCACATACAGGGACAGTGTTGGCATCTGCTACTGGGTTAAGAGTCTCTACTTATTATTCCGGATCAAGTaGGCAAACTCTCTGGACTTA | + |
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Preference number: 5 (lower is better) Translates to: TTYRDSVGICYWVKSLYLLFRIK*ANSLDL Trigger: TAAGTCCAGAGAGTTTGCCAACTTGATCCGGAATAA...TAAGTAGAGACTCTTAACCCAGTAGCAGATGCCAACACTGTCCCTGTATGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS-3UTR CAA 90 bp | AAGTCTCTTAAGGTTGCATTCAAACTCTTTCTGAAACCTGCTAGCGGCATTCACCCTGTATCTCTCCTCTaGCAGAGTCTGAGAGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: KSLKVAFKLFLKPASGIHPVSLL*QSLRDK Trigger: TTTATCTCTCAGACTCTGCAAGAGGAGAGATACAGG...GTGAATGCCGCTAGCAGGTTTCAGAAAGAGTTTGAATGCAACCTTAAGAGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| CDS TCA 72 bp | CACCCGGCTCTTGCAGCGGTGGTGCCGGCCGGGGTCTaGGTAGGTCCGGTCCACGGTGAGCGCCGTGTCGCT | + |
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Preference number: 6 (lower is better) Translates to: HPALAAVVPAGV*VGPVHGERRVA Trigger: AGCGACACGGCGCTCACCGTGGACCGGACCTACTCAGACCCCGGCCGGCACCACCGCTGCAAGAGCCGGGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| CDS CCA 72 bp | CGTATGTTCAGGGGTAGGCTGAGGGTATTCATGTCATaGCGGTCCACCCGGCTCTTGCAGCGGTGGTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: RMFRGRLRVFMS*RSTRLLQRWCR Trigger: CCGGCACCACCGCTGCAAGAGCCGGGTGGACCGCCATGACATGAATACCCTCAGCCTACCCCTGAACATACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065060.12 |
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| CDS CAA 72 bp | GCCAGAACCACGTTGATGCACTTCCCCAGCAGGACCTaGGCGTTCACGGCATCCGTCTGCAGGGTCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: ARTTLMHFPSRT*AFTASVCRVCC Trigger: ACAGCAGACCCTGCAGACGGATGCCGTGAACGCCAAGGTCCTGCTGGGGAAGTGCATCAACGTGGTTCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CAA 72 bp | GTGCTGGTCCCACCAGCCCCAAAGGACTGGTTCCCATaGCTGTCCGCTGAGCCGGATGTGCCACTAGAACAT | + |
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Preference number: 6 (lower is better) Translates to: VLVPPAPKDWFP*LSAEPDVPLEH Trigger: ATGTTCTAGTGGCACATCCGGCTCAGCGGACAGCAATGGGAACCAGTCCTTTGGGGCTGGTGGGACCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CAA 90 bp | GTGGACACACACACCAGGATGACCGTCATGAAGGCCAGAACCACGTaGATGCACTTCCCCAGCAGGACCTTGGCGTTCACGGCATCCGTC | + |
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Preference number: 6 (lower is better) Translates to: VDTHTRMTVMKARTT*MHFPSRTLAFTASV Trigger: GACGGATGCCGTGAACGCCAAGGTCCTGCTGGGGAAGTGCATCAACGTGGTTCTGGCCTTCATGACGGTCATCCTGGTGTGTGTGTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CAA 90 bp | GTGCCAAGGATGTGGGAGCGGCTCTTCATCATGGGCGAGACAAACTaGGCCAGGGTGGACACACACACCAGGATGACCGTCATGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VPRMWERLFIMGETN*ARVDTHTRMTVMKA Trigger: GGCCTTCATGACGGTCATCCTGGTGTGTGTGTCCACCCTGGCCAAGTTTGTCTCGCCCATGATGAAGAGCCGCTCCCACATCCTTGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CAA 90 bp | AGCTGGGTTTGGGTAACCTTGATCTCCCTCAGTTCCTCCATGATCTaGGCAATCTTCCCCTGGCTGTCCAGGGTGCTGGTCCCACCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SWVWVTLISLSSSMI*AIFPWLSRVLVPPA Trigger: GGCTGGTGGGACCAGCACCCTGGACAGCCAGGGGAAGATTGCCAAGATCATGGAGGAACTGAGGGAGATCAAGGTTACCCAAACCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS TCA 72 bp | CGCTTCCGCCGTAAGCCCTGGGGCTGGCTTCGGGCCTaGACTCTTCCAGGGAATTCTTCAAGTGAGCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: RFRRKPWGWLRA*TLPGNSSSEQC Trigger: ACATTGCTCACTTGAAGAATTCCCTGGAAGAGTTCAGGCCCGAAGCCAGCCCCAGGGCTTACGGCGGAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS TCA 72 bp | TTCACGGCATCCGTCTGCAGGGTCTGCTGTTCCTGCTaGTGCAGCTCGAGCTTAGAGATGCGGGTCTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: FTASVCRVCCSC*CSSSLEMRVWQ Trigger: TTGCCAGACCCGCATCTCTAAGCTCGAGCTGCATCAGCAGGAACAGCAGACCCTGCAGACGGATGCCGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CAA 72 bp | CACACCAGGATGACCGTCATGAAGGCCAGAACCACGTaGATGCACTTCCCCAGCAGGACCTTGGCGTTCACG | + |
|
Preference number: 6 (lower is better) Translates to: HTRMTVMKARTT*MHFPSRTLAFT Trigger: CGTGAACGCCAAGGTCCTGCTGGGGAAGTGCATCAACGTGGTTCTGGCCTTCATGACGGTCATCCTGGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CAA 72 bp | ATGTGGGAGCGGCTCTTCATCATGGGCGAGACAAACTaGGCCAGGGTGGACACACACACCAGGATGACCGTC | + |
|
Preference number: 6 (lower is better) Translates to: MWERLFIMGETN*ARVDTHTRMTV Trigger: GACGGTCATCCTGGTGTGTGTGTCCACCCTGGCCAAGTTTGTCTCGCCCATGATGAAGAGCCGCTCCCACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CCA 72 bp | AGAAGGTGCCAAGGATGTGGGAGCGGCTCTTCATCATaGGCGAGACAAACTTGGCCAGGGTGGACACACACA | + |
|
Preference number: 6 (lower is better) Translates to: RRCQGCGSGSSS*ARQTWPGWTHT Trigger: TGTGTGTGTCCACCCTGGCCAAGTTTGTCTCGCCCATGATGAAGAGCCGCTCCCACATCCTTGGCACCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CCA 72 bp | ACCCCTGGCATGCTAGATTTACTGCTCTCCAGGCAGTaGGGAGCAGTTCGAGATTTCACGTGGGCATCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TPGMLDLLLSRQ*GAVRDFTWASF Trigger: GAAGGATGCCCACGTGAAATCTCGAACTGCTCCCCACTGCCTGGAGAGCAGTAAATCTAGCATGCCAGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 ENSMUST00000148823.3 |
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| CDS CCA 72 bp | AACTGCACCTTCAGTGCCTCGATGTCTTCCGCCAGCTaGGTTTGGGTAACCTTGATCTCCCTCAGTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NCTFSASMSSAS*VWVTLISLSSS Trigger: GGAGGAACTGAGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGAAGACATCGAGGCACTGAAGGTGCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CAA 90 bp | ACCTTCAGTGCCTCGATGTCTTCCGCCAGCTGGGTTTGGGTAACCTaGATCTCCCTCAGTTCCTCCATGATCTTGGCAATCTTCCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TFSASMSSASWVWVT*ISLSSSMILAIFPW Trigger: CCAGGGGAAGATTGCCAAGATCATGGAGGAACTGAGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGAAGACATCGAGGCACTGAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS TCA 72 bp | TGTGGAAATCCAGGATGCCATCGGGGACATCGAAGTTaGGGTTGGTGTCTGATCCCCCTCGGCGTATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: CGNPGCHRGHRS*GWCLIPLGVCS Trigger: TGAACATACGCCGAGGGGGATCAGACACCAACCTCAACTTCGATGTCCCCGATGGCATCCTGGATTTCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 ENSMUST00000132743.3 ENSMUST00000148823.3 ENSMUST00000148910.3 |
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| CDS CCA 72 bp | CTCTCCAGGCAGTGGGGAGCAGTTCGAGATTTCACGTaGGCATCCTTCAGAGAGTGGTGTATTTCCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSRQWGAVRDFT*ASFREWCISFR Trigger: CCTGAAGGAAATACACCACTCTCTGAAGGATGCCCACGTGAAATCTCGAACTGCTCCCCACTGCCTGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 ENSMUST00000148823.3 |
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| CDS CCA 72 bp | ACCTTCAGTGCCTCGATGTCTTCCGCCAGCTGGGTTTaGGTAACCTTGATCTCCCTCAGTTCCTCCATGATC | + |
|
Preference number: 6 (lower is better) Translates to: TFSASMSSASWV*VTLISLSSSMI Trigger: GATCATGGAGGAACTGAGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGAAGACATCGAGGCACTGAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CCA 72 bp | GCGAGAAGAGTCACAGCAAAGAAGGTGCCAAGGATGTaGGAGCGGCTCTTCATCATGGGCGAGACAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: ARRVTAKKVPRM*ERLFIMGETNL Trigger: CAAGTTTGTCTCGCCCATGATGAAGAGCCGCTCCCACATCCTTGGCACCTTCTTTGCTGTGACTCTTCTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CAA 72 bp | TTGTGGAAATCCAGGATGCCATCGGGGACATCGAAGTaGAGGTTGGTGTCTGATCCCCCTCGGCGTATGTTC | + |
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Preference number: 6 (lower is better) Translates to: LWKSRMPSGTSK*RLVSDPPRRMF Trigger: GAACATACGCCGAGGGGGATCAGACACCAACCTCAACTTCGATGTCCCCGATGGCATCCTGGATTTCCACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 ENSMUST00000132743.3 ENSMUST00000148823.3 ENSMUST00000148910.3 |
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| CDS CAA 72 bp | CACCTTCAGTGCCTCGATGTCTTCCGCCAGCTGGGTTaGGGTAACCTTGATCTCCCTCAGTTCCTCCATGAT | + |
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Preference number: 6 (lower is better) Translates to: HLQCLDVFRQLG*GNLDLPQFLHD Trigger: ATCATGGAGGAACTGAGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGAAGACATCGAGGCACTGAAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS GCA 72 bp | TACAGAATATGGCGAGAAGAGTCACAGCAAAGAAGGTaGCAAGGATGTGGGAGCGGCTCTTCATCATGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: YRIWREESQQRR*QGCGSGSSSWA Trigger: CGCCCATGATGAAGAGCCGCTCCCACATCCTTGGCACCTTCTTTGCTGTGACTCTTCTCGCCATATTCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CCA 72 bp | GTCTCATGCTGGTGCAGCTCTGTCAGGTCATGGAGCTaGTCTTCAAGTCGCTCATACCTGTATCTCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VSCWCSSVRSWS*SSSRSYLYLSS Trigger: AGAGGAGAGATACAGGTATGAGCGACTTGAAGACCAGCTCCATGACCTGACAGAGCTGCACCAGCATGAGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CCA 72 bp | TTGGCTGTCTCATGCTGGTGCAGCTCTGTCAGGTCATaGAGCTGGTCTTCAAGTCGCTCATACCTGTATCTC | + |
|
Preference number: 6 (lower is better) Translates to: LAVSCWCSSVRS*SWSSSRSYLYL Trigger: GAGATACAGGTATGAGCGACTTGAAGACCAGCTCCATGACCTGACAGAGCTGCACCAGCATGAGACAGCCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CAA 90 bp | CTTAAACTGCACCTTCAGTGCCTCGATGTCTTCCGCCAGCTGGGTTaGGGTAACCTTGATCTCCCTCAGTTCCTCCATGATCTTGGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LKLHLQCLDVFRQLG*GNLDLPQFLHDLGN Trigger: ATTGCCAAGATCATGGAGGAACTGAGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGAAGACATCGAGGCACTGAAGGTGCAGTTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CCA 72 bp | TTTTGTCTCAGGCTGTCCGCATTGAGTTTGACCTTGTaGAAATCCAGGATGCCATCGGGGACATCGAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: FCLRLSALSLTL*KSRMPSGTSKL Trigger: CAACTTCGATGTCCCCGATGGCATCCTGGATTTCCACAAGGTCAAACTCAATGCGGACAGCCTGAGACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 ENSMUST00000132743.3 ENSMUST00000148823.3 ENSMUST00000148910.3 |
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| CDS TCA 72 bp | TTGAGCTCCTGGTCACGCCATTCTGTTCGATCTCCCTaGGCTTTCTGTGATACTGCTCCAACTTCTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LSSWSRHSVRSP*AFCDTAPTSSE Trigger: TTCAGAAGAAGTTGGAGCAGTATCACAGAAAGCTCAGGGAGATCGAACAGAATGGCGTGACCAGGAGCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 ENSMUST00000148823.3 |
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| CDS TCA 72 bp | GTGTATTTCCTTCAGGCTGTCTTTAGAGATGTCCTTTaGGCTCCTGGTCACGCCATTCTGTTCGATCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: VYFLQAVFRDVL*APGHAILFDLP Trigger: AGGGAGATCGAACAGAATGGCGTGACCAGGAGCTCAAAGGACATCTCTAAAGACAGCCTGAAGGAAATACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 ENSMUST00000148823.3 |
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| CDS CCA 72 bp | GCAGTTCGAGATTTCACGTGGGCATCCTTCAGAGAGTaGTGTATTTCCTTCAGGCTGTCTTTAGAGATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AVRDFTWASFRE*CISFRLSLEMS Trigger: GGACATCTCTAAAGACAGCCTGAAGGAAATACACCACTCTCTGAAGGATGCCCACGTGAAATCTCGAACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 ENSMUST00000148823.3 |
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| CDS CCA 72 bp | TGGCACACAAGATATGGTCCCAGTTTTTACAGAATATaGCGAGAAGAGTCACAGCAAAGAAGGTGCCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WHTRYGPSFYRI*REESQQRRCQG Trigger: TCCTTGGCACCTTCTTTGCTGTGACTCTTCTCGCCATATTCTGTAAAAACTGGGACCATATCTTGTGTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS GCA 72 bp | CCAGGGAATTCTTCAAGTGAGCAATGTTATCTGCACTaGCAAACTTATTCCGGATCAAGTTGGCAAACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PGNSSSEQCYLH*QTYSGSSWQTL Trigger: GAGAGTTTGCCAACTTGATCCGGAATAAGTTTGGCAGTGCAGATAACATTGCTCACTTGAAGAATTCCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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| CDS CAA 72 bp | CTGGTCTTCAAGTCGCTCATACCTGTATCTCTCCTCTaGCAGAGTCTGAGAGATAAAGCCATATTCTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LVFKSLIPVSLL*QSLRDKAIFSL Trigger: AAGAGAGAATATGGCTTTATCTCTCAGACTCTGCAAGAGGAGAGATACAGGTATGAGCGACTTGAAGACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065060.12 ENSMUST00000117460.8 ENSMUST00000117929.2 ENSMUST00000121471.8 |
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