Pregenerated sensors for TMC8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050106Ensembl transcript IDs: ENSMUST00000050874.14, ENSMUST00000106334.9, ENSMUST00000117781.8, ENSMUST00000119455.2, ENSMUST00000127080.9
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGAGGTGGTGGAAGGGCTaGGAGTGCAGGAGGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: NKIEVEILMFFLRVWLALRWWKG*ECRRHW Trigger: CCAGTGCCTCCTGCACTCTCAGCCCTTCCACCACCT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| 3UTR-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGAGTGCAGGAGGCACTaGAGGAAGCTGCGGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: NKIEVEILMFFLRVWLALECRRH*RKLRQS Trigger: GCTCTGCCGCAGCTTCCTCCAGTGCCTCCTGCACTC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| 3UTR CCA 72 bp | ATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTaGCTTGCTTTGGAGAACCTTGCTAGAGGACCAGGA | + |
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Preference number: 3 (lower is better) Translates to: IEVEILMFFLRV*LALENLARGPG Trigger: TCCTGGTCCTCTAGCAAGGTTCTCCAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCCAGCCTGGGTGTCCTaGGACCGGGCGAGCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALPAWVS*DRASLG Trigger: GCCCAGGCTCGCCCGGTCCCAGGACACCCAGGCTGG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGTGGAGGGTGCCAGCCTaGGTGTCCTGGGACCGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALWRVPA*VSWDRA Trigger: CGCCCGGTCCCAGGACACCCAGGCTGGCACCCTCCA...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR GCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCCGCGGGCCAGCCGTTaGTCTGCCTCCCTCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALPRASR*SASLRC Trigger: ACACCTGAGGGAGGCAGAGCAACGGCTGGCCCGCGG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGCCGCGGGGACGCCCTaGAGTTCCTCAGGAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALAAGTP*SSSGGC Trigger: ACACCCTCCTGAGGAACTCCAGGGCGTCCCCGCGGC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGCCCCTGGATGGCTCTaGCATTCGCCCGGGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALAPGWL*HSPGTG Trigger: CCCAGTCCCGGGCGAATGCCAGAGCCATCCAGGGGC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR TCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGCCTTCGAGGCAGGCTaGCCAGGAAGGCGAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALAFEAG*PGRRRP Trigger: TGGCCTTCGCCTTCCTGGTCAGCCTGCCTCGAAGGC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGAGGGGACCCGGGCTCTaGGCTCAGTTCTGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALRGPGL*AQFWQQ Trigger: CTGCTGCCAGAACTGAGCCCAGAGCCCGGGTCCCCT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| 3UTR CAA 72 bp | GAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTaGGAGAACCTTGCTAGAGGACCAGGAGCCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EILMFFLRVWLA*ENLARGPGAIC Trigger: ACAGATGGCTCCTGGTCCTCTAGCAAGGTTCTCCAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR GCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGGCCAGCCGTTGCTCTaGCTCCCTCAGGTGTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALGQPLL*LPQVLS Trigger: CGACAACACCTGAGGGAGGCAGAGCAACGGCTGGCC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR GCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGTCTGAGGCAGGGGGCTaGTGGAGCACTGGAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALSEAGG*WSTGVL Trigger: CAGGACTCCAGTGCTCCAGCAGCCCCCTGCCTCAGA...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGTTCAGAGCTGCTCTCTaGCCCCGCTCGGTAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALFRAAL*PRSVGT Trigger: GGTGCCTACCGAGCGGGGCCAGAGAGCAGCTCTGAA...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGAGGAGCTCAGCCTGTTaGAGGGTGCCAGCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALRSSAC*RVPAWV Trigger: CACCCAGGCTGGCACCCTCCAACAGGCTGAGCTCCT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGAGGCAGGGGGCTGCTaGAGCACTGGAGTCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALEAGGC*STGVLS Trigger: TGACAGGACTCCAGTGCTCCAGCAGCCCCCTGCCTC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR TCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCTTGGAATGTCACTCTaGGGCAGGGGGCTGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALLGMSL*GRGLLE Trigger: CTCCAGCAGCCCCCTGCCTCAGAGTGACATTCCAAG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR TCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCCCAGAAGATGGCGCTaGTGGCTCCGACCACTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALPRRWR*WLRPLG Trigger: TCCTAGTGGTCGGAGCCATCAGCGCCATCTTCTGGG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR TCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGTGCGGCTGGGGAAGTaGAATCTGGAGGCAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALVRLGK*NLEAGT Trigger: GGTTCCTGCCTCCAGATTTCACTTCCCCAGCCGCAC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR GCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGGGCGATGCCACCGCTaGCAGAAGGTGGTCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALGRCHR*QKVVFT Trigger: AGTGAAGACCACCTTCTGGCAGCGGTGGCATCGCCC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGACCGCTGCCAGAAGGTaGTCTTCACTCCCTCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALTAARR*SSLPRA Trigger: AGCCCGAGGGAGTGAAGACCACCTTCTGGCAGCGGT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGAGGCAGGGGGCTGCTaGAGCACTGGAGTCTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALEAGGC*STGVSV Trigger: AACTGAGACTCCAGTGCTCCAGCAGCCCCCTGCCTC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050874.14 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGAGAAGAAGGTGGAGCTaGAGGCTCGGAAACGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALRRRWS*RLGNAA Trigger: CGCGGCGTTTCCGAGCCTCCAGCTCCACCTTCTTCT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR TCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGCTGGATCAGGACTGTaGACAATTGGGGGCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALAGSGL*TIGGPG Trigger: TCCTGGGCCCCCAATTGTTCACAGTCCTGATCCAGC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR TCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGATGCACAGCACCGTCTaGCCCAGGGAGAAGGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALMHSTV*PREKEN Trigger: GTTCTCCTTCTCCCTGGGTCAGACGGTGCTGTGCAT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR TCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGAGAGGAAGACACTGTTaGGTAGTGGCAGCAGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALRGRHC*VVAAGG Trigger: GCCCCCTGCTGCCACTACTCAACAGTGTCTTCCTCT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR TCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGAGGAGTGGGTGCTGCTaGTCACGTAGGCCAGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALRSGCC*SRRPEV Trigger: TACCTCTGGCCTACGTGATCAGCAGCACCCACTCCT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR TCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGGGCCGAATAGTTTGTaGAGAGGCCACAGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALGPNSL*RGHSPR Trigger: CCTGGGACTGTGGCCTCTTCACAAACTATTCGGCCC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR GCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGTGCTGTATTCAGAGCTaGTCTCTGGCCCCGCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALCCIQS*SLAPLG Trigger: ACCGAGCGGGGCCAGAGAGCAGCTCTGAATACAGCA...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR GCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCCAGGTGACAGTCTGTaGAGCCACGATGTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALPGDSL*SHDVQH Trigger: GTGCTGGACATCGTGGCTGCACAGACTGTCACCTGG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCCCAAGAGTGTCTGCTaGGGTAGGCCTTCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALPKSVC*GRPSAI Trigger: GATGGCAGAAGGCCTACCCCAGCAGACACTCTTGGG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGAGGCCTTCTGGGCCCTaGTCTGTTGTTGAGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALRPSGP*SVVEPA Trigger: AGCTGGCTCAACAACAGACCAGGGCCCAGAAGGCCT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGAGAACATGCCCAAGCTaGCCAGCTTCAGCACCACGC | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALRTCPS*PASAPR Trigger: GCGTGGTGCTGAAGCTGGCCAGCTTGGGCATGTTCT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGGGCGAGCCTGGGCATaGAAATCCAGGACAGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALGRAWA*KSRTEG Trigger: TCCTTCTGTCCTGGATTTCCATGCCCAGGCTCGCCC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR TCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGGAAGCGAAGGAAAGTaGAGTAGGACTGGATCCCGG | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALGSEGK*SRTGSR Trigger: CCGGGATCCAGTCCTACTTCACTTTCCTTCGCTTCC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR GCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGGTAGGCCAGGCGGATaGTGTATTCAGAGCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALGRPGG*CIQSCS Trigger: AGAGCAGCTCTGAATACAGCATCCGCCTGGCCTACC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR GCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCTTCCCACACCCGGATaGAGAAGTCCCAGGATGAGA | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALLPTPG*RSPRMR Trigger: TCTCATCCTGGGACTTCTGCATCCGGGTGTGGGAAG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGTGTCCTGTGAGTACTTaGTGGCCCAGAAGATGGCGC | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALCPVST*WPRRWR Trigger: GCGCCATCTTCTGGGCCACCAAGTACTCACAGGACA...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGTGGGGAAGTGAAATCTaGAGGCAGGAACCGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALWGSEI*RQEPRH Trigger: GTGCCTCGGTTCCTGCCTCCAGATTTCACTTCCCCA...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR TCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCTCCTTGTTGTCCTGTaGGTACTTGGTGGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALLLVVL*VLGGPE Trigger: TTCTGGGCCACCAAGTACTCACAGGACAACAAGGAG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCCAGGAGGCAAGTACTaGAGCACCAGAAAAAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALPGGKY*STRKRD Trigger: GTCCCTTTTTCTGGTGCTCCAGTACTTGCCTCCTGG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCGTAGGACTCGCAGCTaGTCTTGTTTCTGCCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALRRTRS*SCFCLC Trigger: GCATAGGCAGAAACAAGACCAGCTGCGAGTCCTACG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS-3UTR GCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCCTTCTGCCATCCTCTaGAGTATCCCACAGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALPSAIL*SIPQKQ Trigger: CTGTTTCTGTGGGATACTGCAGAGGATGGCAGAAGG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS-3UTR GCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGAGCTGGTCTTGTTTCTaGCTATGCACAGCACCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALSWSCF*LCTAPS Trigger: AGACGGTGCTGTGCATAGGCAGAAACAAGACCAGCT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS-3UTR GCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGTCATTGCTGATTTCGTaGTTCTTGATGGTGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALSLLIS*FLMVAA Trigger: AGCCGCCACCATCAAGAAGCACGAAATCAGCAATGA...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS-3UTR TCA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGAGAGATAGGTGTTGTTaGAGGCTCTGCCCGTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NKIEVEILMFFLRVWLALRDRCC*RLCPLK Trigger: TTTTAACGGGCAGAGCCTTCAACAACACCTATCTCT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS CCA 90 bp | GAACCGAGGCACTGGGGGCTCCGAGGCTCGAGGAGCTCAGCCTGTTaGAGGGTGCCAGCCTGGGTGTCCTGGGACCGGGCGAGCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EPRHWGLRGSRSSAC*RVPAWVSWDRASLG Trigger: GCCCAGGCTCGCCCGGTCCCAGGACACCCAGGCTGGCACCCTCCAACAGGCTGAGCTCCTCGAGCCTCGGAGCCCCCAGTGCCTCGGTTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
||
| CDS GCA 90 bp | GAGAGCTCCCTCCCAGAGACCGAAGCCGCGGGCCAGCCGTTGCTCTaGCTCCCTCAGGTGTTGTCGCGCCACCCGCCTCGGGCGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ESSLPETEAAGQPLL*LPQVLSRHPPRAMP Trigger: TGGCATCGCCCGAGGCGGGTGGCGCGACAACACCTGAGGGAGGCAGAGCAACGGCTGGCCCGCGGCTTCGGTCTCTGGGAGGGAGCTCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 ENSMUST00000127080.9 |
||
| CDS GCA 90 bp | TCCCTCAGGTGTTGTCGCGCCACCCGCCTCGGGCGATGCCACCGCTaGCAGAAGGTGGTCTTCACTCCCTCGGGCTCCCGCAGTTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLRCCRATRLGRCHR*QKVVFTPSGSRSSR Trigger: CCGGGAACTGCGGGAGCCCGAGGGAGTGAAGACCACCTTCTGGCAGCGGTGGCATCGCCCGAGGCGGGTGGCGCGACAACACCTGAGGGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 ENSMUST00000127080.9 |
||
| CDS GCA 90 bp | TGCTCTGCCTCCCTCAGGTGTTGTCGCGCCACCCGCCTCGGGCGATaGCACCGCTGCCAGAAGGTGGTCTTCACTCCCTCGGGCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CSASLRCCRATRLGR*HRCQKVVFTPSGSR Trigger: GCGGGAGCCCGAGGGAGTGAAGACCACCTTCTGGCAGCGGTGGCATCGCCCGAGGCGGGTGGCGCGACAACACCTGAGGGAGGCAGAGCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 ENSMUST00000127080.9 |
||
| CDS CCA 90 bp | GAAGGCGTGGGAGCTGAGGTAACGGAGGGCACGCTGGCTAGGAAGTaGGAGCTGGAGGGCTACCAGCTCGGGTACCACCTGCCAGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EGVGAEVTEGTLARK*ELEGYQLGYHLPGG Trigger: GCCCCCTGGCAGGTGGTACCCGAGCTGGTAGCCCTCCAGCTCCCACTTCCTAGCCAGCGTGCCCTCCGTTACCTCAGCTCCCACGCCTTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
||
| CDS CCA 90 bp | GAAGGATCGTGGACGCGAAGCTCGAGAGTGAGGGGACCCGGGCTCTaGGCTCAGTTCTGGCAGCAGCCGCGACAGGTCGTCCACCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGSWTRSSRVRGPGL*AQFWQQPRQVVHQV Trigger: CACCTGGTGGACGACCTGTCGCGGCTGCTGCCAGAACTGAGCCCAGAGCCCGGGTCCCCTCACTCTCGAGCTTCGCGTCCACGATCCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
||
| CDS CCA 90 bp | CATAGCCGCTCCACTTCTTGCTCCCACAGCTCCTCCGAGGCCGCCTaGGATTCAGGCCTTCGTGGGGCTGGTCCTGACTGCACCGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: HSRSTSCSHSSSEAA*DSGLRGAGPDCTDH Trigger: GTGGTCGGTGCAGTCAGGACCAGCCCCACGAAGGCCTGAATCCCAGGCGGCCTCGGAGGAGCTGTGGGAGCAAGAAGTGGAGCGGCTATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 ENSMUST00000127080.9 |
||
| CDS GCA 90 bp | AGGTCGTCCACCAGGTGCCACTTTTCCTGGACCTGCCACACCAGTTaGTTCCTCAGCCCCTGGATGGCTCTGGCATTCGCCCGGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSSTRCHFSWTCHTS*FLSPWMALAFARDW Trigger: CCAGTCCCGGGCGAATGCCAGAGCCATCCAGGGGCTGAGGAAGCAACTGGTGTGGCAGGTCCAGGAAAAGTGGCACCTGGTGGACGACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
||
| CDS GCA 90 bp | TCTGGGCTCAGTTCTGGCAGCAGCCGCGACAGGTCGTCCACCAGGTaGCACTTTTCCTGGACCTGCCACACCAGTTGCTTCCTCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGLSSGSSRDRSSTR*HFSWTCHTSCFLSP Trigger: GGGGCTGAGGAAGCAACTGGTGTGGCAGGTCCAGGAAAAGTGGCACCTGGTGGACGACCTGTCGCGGCTGCTGCCAGAACTGAGCCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
||
| CDS CCA 90 bp | GCCAGAGGTACTGCAGCCAAAAGCAGGCCTAGGAGCAGCACCAGGTaGAAGAAGAAGGTGGAGCTGGAGGCTCGGAAACGCCGCGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ARGTAAKSRPRSSTR*KKKVELEARKRRGD Trigger: GTCCCCGCGGCGTTTCCGAGCCTCCAGCTCCACCTTCTTCTTCCACCTGGTGCTGCTCCTAGGCCTGCTTTTGGCTGCAGTACCTCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
||
| CDS CCA 90 bp | CCTGGACCTGCCACACCAGTTGCTTCCTCAGCCCCTGGATGGCTCTaGCATTCGCCCGGGACTGGGAGATGCAAACCGTCAGGACGATGC | + |
|
Preference number: 5 (lower is better) Translates to: PGPATPVASSAPGWL*HSPGTGRCKPSGRC Trigger: GCATCGTCCTGACGGTTTGCATCTCCCAGTCCCGGGCGAATGCCAGAGCCATCCAGGGGCTGAGGAAGCAACTGGTGTGGCAGGTCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
||
| CDS GCA 90 bp | AGCAGCCGCGACAGGTCGTCCACCAGGTGCCACTTTTCCTGGACCTaGCACACCAGTTGCTTCCTCAGCCCCTGGATGGCTCTGGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SSRDRSSTRCHFSWT*HTSCFLSPWMALAF Trigger: GAATGCCAGAGCCATCCAGGGGCTGAGGAAGCAACTGGTGTGGCAGGTCCAGGAAAAGTGGCACCTGGTGGACGACCTGTCGCGGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
||
| CDS TCA 90 bp | CCCACACCCGGATGCAGAAGTCCCAGGATGAGAACACTTTGGCGCTaGGGGGTGTCCTGTAGCGCTGACCCAAGAGTGTCTGCTGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PTPGCRSPRMRTLWR*GVSCSADPRVSAGV Trigger: TACCCCAGCAGACACTCTTGGGTCAGCGCTACAGGACACCCCTCAGCGCCAAAGTGTTCTCATCCTGGGACTTCTGCATCCGGGTGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
||
| CDS TCA 90 bp | CTTGATGGTGGCGGCTTCCCACACCCGGATGCAGAAGTCCCAGGATaGGAACACTTTGGCGCTGAGGGGTGTCCTGTAGCGCTGACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LDGGGFPHPDAEVPG*EHFGAEGCPVALTQ Trigger: TTGGGTCAGCGCTACAGGACACCCCTCAGCGCCAAAGTGTTCTCATCCTGGGACTTCTGCATCCGGGTGTGGGAAGCCGCCACCATCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
||
| CDS CCA 90 bp | GTGGGTTGTGAAACCTTGGAATGTCACTCTGAGGCAGGGGGCTGCTaGAGCACTGGAGTCTCAGTTTCAGGGCAGGGCCTAGCTCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGCETLECHSEAGGC*STGVSVSGQGLAQG Trigger: CCCCTGAGCTAGGCCCTGCCCTGAAACTGAGACTCCAGTGCTCCAGCAGCCCCCTGCCTCAGAGTGACATTCCAAGGTTTCACAACCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050874.14 ENSMUST00000117781.8 |
||
| CDS CCA 90 bp | AGTTGCTTCCTCAGCCCCTGGATGGCTCTGGCATTCGCCCGGGACTaGGAGATGCAAACCGTCAGGACGATGCTGAGCAGAATGAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SCFLSPWMALAFARD*EMQTVRTMLSRMRS Trigger: ACTCCTCATTCTGCTCAGCATCGTCCTGACGGTTTGCATCTCCCAGTCCCGGGCGAATGCCAGAGCCATCCAGGGGCTGAGGAAGCAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CCA 90 bp | GTGGGTTGTGAAACCTTGGAATGTCACTCTGAGGCAGGGGGCTGCTaGAGCACTGGAGTCCTGTCAGTTTCAGGGCAGGGCCTAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VGCETLECHSEAGGC*STGVLSVSGQGLAQ Trigger: CTGAGCTAGGCCCTGCCCTGAAACTGACAGGACTCCAGTGCTCCAGCAGCCCCCTGCCTCAGAGTGACATTCCAAGGTTTCACAACCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS GCA 90 bp | CGGCGGCCCTCTTCCAGCTCCATCTTCAGTTCATTGCTGATTTCGTaGTTCTTGATGGTGGCGGCTTCCCACACCCGGATGCAGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRPSSSSIFSSLLIS*FLMVAASHTRMQKS Trigger: GGACTTCTGCATCCGGGTGTGGGAAGCCGCCACCATCAAGAAGCACGAAATCAGCAATGAACTGAAGATGGAGCTGGAAGAGGGCCGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS GCA 90 bp | CGGCGGCCCTCTTCCAGACACACCTTCAGTTCATTGCTGATTTCGTaGTTCTTGATGGTGGCGGCTTCCCACACCCGGATGCAGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRPSSRHTFSSLLIS*FLMVAASHTRMQKS Trigger: GGACTTCTGCATCCGGGTGTGGGAAGCCGCCACCATCAAGAAGCACGAAATCAGCAATGAACTGAAGGTGTGTCTGGAAGAGGGCCGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117781.8 |
||
| CDS GCA 90 bp | AAAGTGGGTTGTGAAACCTTGGAATGTCACTCTGAGGCAGGGGGCTaGTGGAGCACTGGAGTCTCAGTTTCAGGGCAGGGCCTAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KVGCETLECHSEAGG*WSTGVSVSGQGLAQ Trigger: CTGAGCTAGGCCCTGCCCTGAAACTGAGACTCCAGTGCTCCAGCAGCCCCCTGCCTCAGAGTGACATTCCAAGGTTTCACAACCCACTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050874.14 ENSMUST00000117781.8 |
||
| CDS GCA 90 bp | AAGCGTTGTAGCCGTAGGACTCGCAGCTGGTCTTGTTTCTGCCTATaGACAGCACCGTCTGACCCAGGGAGAAGGAGAACATGCCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KRCSRRTRSWSCFCL*TAPSDPGRRRTCPS Trigger: GCTTGGGCATGTTCTCCTTCTCCCTGGGTCAGACGGTGCTGTGCATAGGCAGAAACAAGACCAGCTGCGAGTCCTACGGCTACAACGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
||
| CDS GCA 90 bp | AGTCGCAAGCGTTGTAGCCGTAGGACTCGCAGCTGGTCTTGTTTCTaGCTATGCACAGCACCGTCTGACCCAGGGAGAAGGAGAACATGC | + |
|
Preference number: 5 (lower is better) Translates to: SRKRCSRRTRSWSCF*LCTAPSDPGRRRTC Trigger: GCATGTTCTCCTTCTCCCTGGGTCAGACGGTGCTGTGCATAGGCAGAAACAAGACCAGCTGCGAGTCCTACGGCTACAACGCTTGCGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
||
| CDS GCA 90 bp | AAAGTGGGTTGTGAAACCTTGGAATGTCACTCTGAGGCAGGGGGCTaGTGGAGCACTGGAGTCCTGTCAGTTTCAGGGCAGGGCCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KVGCETLECHSEAGG*WSTGVLSVSGQGLA Trigger: AGCTAGGCCCTGCCCTGAAACTGACAGGACTCCAGTGCTCCAGCAGCCCCCTGCCTCAGAGTGACATTCCAAGGTTTCACAACCCACTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS CCA 90 bp | GCTAAGGAGGTAGGCCAGGCGGATGCTGTATTCAGAGCTGCTCTCTaGCCCCGCTCGGTAGGCACCGTAGAAGAGATAGGTGTTGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: AKEVGQADAVFRAAL*PRSVGTVEEIGVVE Trigger: TTCAACAACACCTATCTCTTCTACGGTGCCTACCGAGCGGGGCCAGAGAGCAGCTCTGAATACAGCATCCGCCTGGCCTACCTCCTTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGCCGCGGGCCAGCCGTaGCTCTGCCTCCCTCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NKIEVEILMFFLRVWLALAAGQP*LCLPQV Trigger: CACCTGAGGGAGGCAGAGCAACGGCTGGCCCGCGGC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCTGGGCCCTGGTCTGTaGTTGAGCCAGCTCCACGCG | + |
|
Preference number: 5 (lower is better) Translates to: NKIEVEILMFFLRVWLALLGPGL*LSQLHA Trigger: CGCGTGGAGCTGGCTCAACAACAGACCAGGGCCCAG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGAGGAGCTCAGCCTGTaGGAGGGTGCCAGCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: NKIEVEILMFFLRVWLALEELSL*EGASLG Trigger: ACCCAGGCTGGCACCCTCCAACAGGCTGAGCTCCTC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGTGGGGGCCCAGGAAGTaGACCAGGGAGATGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NKIEVEILMFFLRVWLALWGPRK*TREMTP Trigger: TGGAGTCATCTCCCTGGTCAACTTCCTGGGCCCCCA...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCAGATCAGGGTGAGGTaGACTTCAGTGCCGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NKIEVEILMFFLRVWLALQIRVR*TSVPGG Trigger: CCCTCCCGGCACTGAAGTCAACCTCACCCTGATCTG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCAGGATGAGAACACTTaGGCGCTGAGGGGTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NKIEVEILMFFLRVWLALQDENT*ALRGVL Trigger: CAGGACACCCCTCAGCGCCAAAGTGTTCTCATCCTG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCTGATTTCGTGCTTCTaGATGGTGGCGGCTTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NKIEVEILMFFLRVWLALLISCF*MVAASH Trigger: GTGGGAAGCCGCCACCATCAAGAAGCACGAAATCAG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGTTGTCCTGTGAGTACTaGGTGGCCCAGAAGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: NKIEVEILMFFLRVWLALLSCEY*VAQKMA Trigger: CGCCATCTTCTGGGCCACCAAGTACTCACAGGACAA...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGCAGGACTGTGAACAATaGGGGGCCCAGGAAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NKIEVEILMFFLRVWLALQDCEQ*GAQEVD Trigger: GTCAACTTCCTGGGCCCCCAATTGTTCACAGTCCTG...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGAAGAGGAAGACACTGTaGAGTAGTGGCAGCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NKIEVEILMFFLRVWLALKRKTL*SSGSRG Trigger: CCCCCTGCTGCCACTACTCAACAGTGTCTTCCTCTT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGAGGGACTCCTCCTTGTaGTCCTGTGAGTACTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NKIEVEILMFFLRVWLALRDSSL*SCEYLV Trigger: CACCAAGTACTCACAGGACAACAAGGAGGAGTCCCT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGGTGGGTTGTGAAACCTaGGAATGTCACTCTGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NKIEVEILMFFLRVWLALVGCET*ECHSEA Trigger: TGCCTCAGAGTGACATTCCAAGGTTTCACAACCCAC...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CAA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGAAAAGGGACTCCTCCTaGTTGTCCTGTGAGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: NKIEVEILMFFLRVWLALKRDSS*LSCEYL Trigger: CAAGTACTCACAGGACAACAAGGAGGAGTCCCTTTT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS-3UTR CAA 90 bp | AATAAAATAGAGGTAGAAATTCTCATGTTCTTCCTGAGGGTGTGGCTTGCTTTGACGGTGAGCAGGAAGTaGAAGATGATTAACTTATAT | + |
|
Preference number: 5 (lower is better) Translates to: NKIEVEILMFFLRVWLALTVSRK*KMINLY Trigger: ATATAAGTTAATCATCTTCAACTTCCTGCTCACCGT...CAAAGCAAGCCACACCCTCAGGAAGAACATGAGAATTTCTACCTCTATTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS GCA 72 bp | CTCCCAGAGACCGAAGCCGCGGGCCAGCCGTTGCTCTaGCTCCCTCAGGTGTTGTCGCGCCACCCGCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LPETEAAGQPLL*LPQVLSRHPPR Trigger: CCGAGGCGGGTGGCGCGACAACACCTGAGGGAGGCAGAGCAACGGCTGGCCCGCGGCTTCGGTCTCTGGGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 ENSMUST00000127080.9 |
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| CDS GCA 72 bp | GCTCCCTCCCAGAGACCGAAGCCGCGGGCCAGCCGTTaGTCTGCCTCCCTCAGGTGTTGTCGCGCCACCCGC | + |
|
Preference number: 6 (lower is better) Translates to: APSQRPKPRASR*SASLRCCRATR Trigger: GCGGGTGGCGCGACAACACCTGAGGGAGGCAGAGCAACGGCTGGCCCGCGGCTTCGGTCTCTGGGAGGGAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 ENSMUST00000127080.9 |
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| CDS CCA 72 bp | CACTGGGGGCTCCGAGGCTCGAGGAGCTCAGCCTGTTaGAGGGTGCCAGCCTGGGTGTCCTGGGACCGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: HWGLRGSRSSAC*RVPAWVSWDRA Trigger: CGCCCGGTCCCAGGACACCCAGGCTGGCACCCTCCAACAGGCTGAGCTCCTCGAGCCTCGGAGCCCCCAGTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CAA 72 bp | GCACTGGGGGCTCCGAGGCTCGAGGAGCTCAGCCTGTaGGAGGGTGCCAGCCTGGGTGTCCTGGGACCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ALGAPRLEELSL*EGASLGVLGPG Trigger: GCCCGGTCCCAGGACACCCAGGCTGGCACCCTCCAACAGGCTGAGCTCCTCGAGCCTCGGAGCCCCCAGTGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CAA 90 bp | CTCGTAGAGAGCTCCCTCCCAGAGACCGAAGCCGCGGGCCAGCCGTaGCTCTGCCTCCCTCAGGTGTTGTCGCGCCACCCGCCTCGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LVESSLPETEAAGQP*LCLPQVLSRHPPRA Trigger: CGCCCGAGGCGGGTGGCGCGACAACACCTGAGGGAGGCAGAGCAACGGCTGGCCCGCGGCTTCGGTCTCTGGGAGGGAGCTCTCTACGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 ENSMUST00000127080.9 |
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| CDS GCA 72 bp | TGTTGTCGCGCCACCCGCCTCGGGCGATGCCACCGCTaGCAGAAGGTGGTCTTCACTCCCTCGGGCTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: CCRATRLGRCHR*QKVVFTPSGSR Trigger: GCGGGAGCCCGAGGGAGTGAAGACCACCTTCTGGCAGCGGTGGCATCGCCCGAGGCGGGTGGCGCGACAACA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 ENSMUST00000127080.9 |
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| CDS CCA 72 bp | CCACCCGCCTCGGGCGATGCCACCGCTGCCAGAAGGTaGTCTTCACTCCCTCGGGCTCCCGCAGTTCCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: PPASGDATAARR*SSLPRAPAVPG Trigger: TCCGGGAACTGCGGGAGCCCGAGGGAGTGAAGACCACCTTCTGGCAGCGGTGGCATCGCCCGAGGCGGGTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 ENSMUST00000127080.9 |
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| CDS TCA 72 bp | AGCAGGCGGCAGGCCTTCTGGGCCCTGGTCTGTTGTTaGGCCAGCTCCACGCGGCGGCCCTCTTCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRRQAFWALVCC*ASSTRRPSSSS Trigger: GGAGCTGGAAGAGGGCCGCCGCGTGGAGCTGGCTCAACAACAGACCAGGGCCCAGAAGGCCTGCCGCCTGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS CCA 72 bp | GGCTCGAGGAGCTCAGCCTGTTGGAGGGTGCCAGCCTaGGTGTCCTGGGACCGGGCGAGCCTGGGCATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GSRSSACWRVPA*VSWDRASLGME Trigger: TTCCATGCCCAGGCTCGCCCGGTCCCAGGACACCCAGGCTGGCACCCTCCAACAGGCTGAGCTCCTCGAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CAA 72 bp | GAGCAGGCGGCAGGCCTTCTGGGCCCTGGTCTGTTGTaGAGCCAGCTCCACGCGGCGGCCCTCTTCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: EQAAGLLGPGLL*SQLHAAALFQL Trigger: GAGCTGGAAGAGGGCCGCCGCGTGGAGCTGGCTCAACAACAGACCAGGGCCCAGAAGGCCTGCCGCCTGCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS TCA 72 bp | AGCAGGCGGCAGGCCTTCTGGGCCCTGGTCTGTTGTTaGGCCAGCTCCACGCGGCGGCCCTCTTCCAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: SRRQAFWALVCC*ASSTRRPSSRH Trigger: GTGTCTGGAAGAGGGCCGCCGCGTGGAGCTGGCTCAACAACAGACCAGGGCCCAGAAGGCCTGCCGCCTGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117781.8 |
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| CDS CCA 72 bp | TGGACGCGAAGCTCGAGAGTGAGGGGACCCGGGCTCTaGGCTCAGTTCTGGCAGCAGCCGCGACAGGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: WTRSSRVRGPGL*AQFWQQPRQVV Trigger: GACGACCTGTCGCGGCTGCTGCCAGAACTGAGCCCAGAGCCCGGGTCCCCTCACTCTCGAGCTTCGCGTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CAA 72 bp | GAGCAGGCGGCAGGCCTTCTGGGCCCTGGTCTGTTGTaGAGCCAGCTCCACGCGGCGGCCCTCTTCCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: EQAAGLLGPGLL*SQLHAAALFQT Trigger: TGTCTGGAAGAGGGCCGCCGCGTGGAGCTGGCTCAACAACAGACCAGGGCCCAGAAGGCCTGCCGCCTGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117781.8 |
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| CDS CCA 72 bp | GGGTGCCAGCCTGGGTGTCCTGGGACCGGGCGAGCCTaGGCATGGAAATCCAGGACAGAAGGATCGTGGACG | + |
|
Preference number: 6 (lower is better) Translates to: GCQPGCPGTGRA*AWKSRTEGSWT Trigger: CGTCCACGATCCTTCTGTCCTGGATTTCCATGCCCAGGCTCGCCCGGTCCCAGGACACCCAGGCTGGCACCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CCA 72 bp | AGCTCAGCCTGTTGGAGGGTGCCAGCCTGGGTGTCCTaGGACCGGGCGAGCCTGGGCATGGAAATCCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSACWRVPAWVS*DRASLGMEIQD Trigger: GTCCTGGATTTCCATGCCCAGGCTCGCCCGGTCCCAGGACACCCAGGCTGGCACCCTCCAACAGGCTGAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CAA 90 bp | GCGAAGGTAGGTGAGCAGGCGGCAGGCCTTCTGGGCCCTGGTCTGTaGTTGAGCCAGCTCCACGCGGCGGCCCTCTTCCAGCTCCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: AKVGEQAAGLLGPGL*LSQLHAAALFQLHL Trigger: AAGATGGAGCTGGAAGAGGGCCGCCGCGTGGAGCTGGCTCAACAACAGACCAGGGCCCAGAAGGCCTGCCGCCTGCTCACCTACCTTCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS CAA 90 bp | GCGAAGGTAGGTGAGCAGGCGGCAGGCCTTCTGGGCCCTGGTCTGTaGTTGAGCCAGCTCCACGCGGCGGCCCTCTTCCAGACACACCTT | + |
|
Preference number: 6 (lower is better) Translates to: AKVGEQAAGLLGPGL*LSQLHAAALFQTHL Trigger: AAGGTGTGTCTGGAAGAGGGCCGCCGCGTGGAGCTGGCTCAACAACAGACCAGGGCCCAGAAGGCCTGCCGCCTGCTCACCTACCTTCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117781.8 |
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| CDS CCA 72 bp | TCCACTTCTTGCTCCCACAGCTCCTCCGAGGCCGCCTaGGATTCAGGCCTTCGTGGGGCTGGTCCTGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: STSCSHSSSEAA*DSGLRGAGPDC Trigger: GCAGTCAGGACCAGCCCCACGAAGGCCTGAATCCCAGGCGGCCTCGGAGGAGCTGTGGGAGCAAGAAGTGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 ENSMUST00000127080.9 |
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| CDS CCA 72 bp | GGAGCTGAGGTAACGGAGGGCACGCTGGCTAGGAAGTaGGAGCTGGAGGGCTACCAGCTCGGGTACCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: GAEVTEGTLARK*ELEGYQLGYHL Trigger: CAGGTGGTACCCGAGCTGGTAGCCCTCCAGCTCCCACTTCCTAGCCAGCGTGCCCTCCGTTACCTCAGCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CAA 90 bp | AAGGTAGGTGAGCAGGCGGCAGGCCTTCTGGGCCCTGGTCTGTTGTaGAGCCAGCTCCACGCGGCGGCCCTCTTCCAGCTCCATCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KVGEQAAGLLGPGLL*SQLHAAALFQLHLQ Trigger: CTGAAGATGGAGCTGGAAGAGGGCCGCCGCGTGGAGCTGGCTCAACAACAGACCAGGGCCCAGAAGGCCTGCCGCCTGCTCACCTACCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS CAA 90 bp | AAGGTAGGTGAGCAGGCGGCAGGCCTTCTGGGCCCTGGTCTGTTGTaGAGCCAGCTCCACGCGGCGGCCCTCTTCCAGACACACCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KVGEQAAGLLGPGLL*SQLHAAALFQTHLQ Trigger: CTGAAGGTGTGTCTGGAAGAGGGCCGCCGCGTGGAGCTGGCTCAACAACAGACCAGGGCCCAGAAGGCCTGCCGCCTGCTCACCTACCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117781.8 |
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| CDS CCA 72 bp | TCCTGGACCTGCCACACCAGTTGCTTCCTCAGCCCCTaGATGGCTCTGGCATTCGCCCGGGACTGGGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: SWTCHTSCFLSP*MALAFARDWEM Trigger: CATCTCCCAGTCCCGGGCGAATGCCAGAGCCATCCAGGGGCTGAGGAAGCAACTGGTGTGGCAGGTCCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CCA 72 bp | CGAGCCTGGGCATGGAAATCCAGGACAGAAGGATCGTaGACGCGAAGCTCGAGAGTGAGGGGACCCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RAWAWKSRTEGS*TRSSRVRGPGL Trigger: GAGCCCGGGTCCCCTCACTCTCGAGCTTCGCGTCCACGATCCTTCTGTCCTGGATTTCCATGCCCAGGCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CAA 90 bp | CAGGTCGTCCACCAGGTGCCACTTTTCCTGGACCTGCCACACCAGTaGCTTCCTCAGCCCCTGGATGGCTCTGGCATTCGCCCGGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: QVVHQVPLFLDLPHQ*LPQPLDGSGIRPGL Trigger: CAGTCCCGGGCGAATGCCAGAGCCATCCAGGGGCTGAGGAAGCAACTGGTGTGGCAGGTCCAGGAAAAGTGGCACCTGGTGGACGACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CCA 72 bp | CTCAGCCCCTGGATGGCTCTGGCATTCGCCCGGGACTaGGAGATGCAAACCGTCAGGACGATGCTGAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSPWMALAFARD*EMQTVRTMLSR Trigger: TCTGCTCAGCATCGTCCTGACGGTTTGCATCTCCCAGTCCCGGGCGAATGCCAGAGCCATCCAGGGGCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CCA 72 bp | GGACCTGCCACACCAGTTGCTTCCTCAGCCCCTGGATaGCTCTGGCATTCGCCCGGGACTGGGAGATGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GPATPVASSAPG*LWHSPGTGRCK Trigger: TTTGCATCTCCCAGTCCCGGGCGAATGCCAGAGCCATCCAGGGGCTGAGGAAGCAACTGGTGTGGCAGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CAA 90 bp | GCCAGCTCCACGCGGCGGCCCTCTTCCAGCTCCATCTTCAGTTCATaGCTGATTTCGTGCTTCTTGATGGTGGCGGCTTCCCACACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ASSTRRPSSSSIFSS*LISCFLMVAASHTR Trigger: CCGGGTGTGGGAAGCCGCCACCATCAAGAAGCACGAAATCAGCAATGAACTGAAGATGGAGCTGGAAGAGGGCCGCCGCGTGGAGCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS CAA 90 bp | GCCAGCTCCACGCGGCGGCCCTCTTCCAGACACACCTTCAGTTCATaGCTGATTTCGTGCTTCTTGATGGTGGCGGCTTCCCACACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ASSTRRPSSRHTFSS*LISCFLMVAASHTR Trigger: CCGGGTGTGGGAAGCCGCCACCATCAAGAAGCACGAAATCAGCAATGAACTGAAGGTGTGTCTGGAAGAGGGCCGCCGCGTGGAGCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117781.8 |
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| CDS GCA 72 bp | ACCAGGTGCCACTTTTCCTGGACCTGCCACACCAGTTaGTTCCTCAGCCCCTGGATGGCTCTGGCATTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: TRCHFSWTCHTS*FLSPWMALAFA Trigger: GGCGAATGCCAGAGCCATCCAGGGGCTGAGGAAGCAACTGGTGTGGCAGGTCCAGGAAAAGTGGCACCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS GCA 72 bp | GACAGGTCGTCCACCAGGTGCCACTTTTCCTGGACCTaGCACACCAGTTGCTTCCTCAGCCCCTGGATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DRSSTRCHFSWT*HTSCFLSPWMA Trigger: AGCCATCCAGGGGCTGAGGAAGCAACTGGTGTGGCAGGTCCAGGAAAAGTGGCACCTGGTGGACGACCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS GCA 72 bp | AGTTCTGGCAGCAGCCGCGACAGGTCGTCCACCAGGTaGCACTTTTCCTGGACCTGCCACACCAGTTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSGSSRDRSSTR*HFSWTCHTSCF Trigger: GAAGCAACTGGTGTGGCAGGTCCAGGAAAAGTGGCACCTGGTGGACGACCTGTCGCGGCTGCTGCCAGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CAA 72 bp | CACCAGGTGCCACTTTTCCTGGACCTGCCACACCAGTaGCTTCCTCAGCCCCTGGATGGCTCTGGCATTCGC | + |
|
Preference number: 6 (lower is better) Translates to: HQVPLFLDLPHQ*LPQPLDGSGIR Trigger: GCGAATGCCAGAGCCATCCAGGGGCTGAGGAAGCAACTGGTGTGGCAGGTCCAGGAAAAGTGGCACCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CCA 72 bp | GTAGGCCAGGCGGATGCTGTATTCAGAGCTGCTCTCTaGCCCCGCTCGGTAGGCACCGTAGAAGAGATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VGQADAVFRAAL*PRSVGTVEEIG Trigger: ACCTATCTCTTCTACGGTGCCTACCGAGCGGGGCCAGAGAGCAGCTCTGAATACAGCATCCGCCTGGCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS GCA 72 bp | TGTGAAACCTTGGAATGTCACTCTGAGGCAGGGGGCTaGTGGAGCACTGGAGTCTCAGTTTCAGGGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CETLECHSEAGG*WSTGVSVSGQG Trigger: GCCCTGCCCTGAAACTGAGACTCCAGTGCTCCAGCAGCCCCCTGCCTCAGAGTGACATTCCAAGGTTTCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050874.14 ENSMUST00000117781.8 |
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| CDS GCA 72 bp | CGTTGTAGCCGTAGGACTCGCAGCTGGTCTTGTTTCTaGCTATGCACAGCACCGTCTGACCCAGGGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RCSRRTRSWSCF*LCTAPSDPGRR Trigger: CCTTCTCCCTGGGTCAGACGGTGCTGTGCATAGGCAGAAACAAGACCAGCTGCGAGTCCTACGGCTACAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS GCA 72 bp | GGGGCAGTAGAAGAGGCCCATCCAGGTGACAGTCTGTaGAGCCACGATGTCCAGCACATTCTTAGGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: GAVEEAHPGDSL*SHDVQHILRHQ Trigger: CTGGTGCCTAAGAATGTGCTGGACATCGTGGCTGCACAGACTGTCACCTGGATGGGCCTCTTCTACTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CAA 90 bp | TGGAGCACCAGAAAAAGGGACTCCTCCTTGTTGTCCTGTGAGTACTaGGTGGCCCAGAAGATGGCGCTGATGGCTCCGACCACTAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: WSTRKRDSSLLSCEY*VAQKMALMAPTTRS Trigger: GCTCCTAGTGGTCGGAGCCATCAGCGCCATCTTCTGGGCCACCAAGTACTCACAGGACAACAAGGAGGAGTCCCTTTTTCTGGTGCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS TCA 72 bp | GGATGCAGAAGTCCCAGGATGAGAACACTTTGGCGCTaGGGGGTGTCCTGTAGCGCTGACCCAAGAGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GCRSPRMRTLWR*GVSCSADPRVS Trigger: AGACACTCTTGGGTCAGCGCTACAGGACACCCCTCAGCGCCAAAGTGTTCTCATCCTGGGACTTCTGCATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CAA 72 bp | ACGCGGCGGCCCTCTTCCAGCTCCATCTTCAGTTCATaGCTGATTTCGTGCTTCTTGATGGTGGCGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TRRPSSSSIFSS*LISCFLMVAAS Trigger: GGAAGCCGCCACCATCAAGAAGCACGAAATCAGCAATGAACTGAAGATGGAGCTGGAAGAGGGCCGCCGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS CAA 90 bp | TTCTCCAGCTGGATCAGGACTGTGAACAATTGGGGGCCCAGGAAGTaGACCAGGGAGATGACTCCAGGAGGCAAGTACTGGAGCACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FSSWIRTVNNWGPRK*TREMTPGGKYWSTR Trigger: TCTGGTGCTCCAGTACTTGCCTCCTGGAGTCATCTCCCTGGTCAACTTCCTGGGCCCCCAATTGTTCACAGTCCTGATCCAGCTGGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CAA 72 bp | AGAAAAAGGGACTCCTCCTTGTTGTCCTGTGAGTACTaGGTGGCCCAGAAGATGGCGCTGATGGCTCCGACC | + |
|
Preference number: 6 (lower is better) Translates to: RKRDSSLLSCEY*VAQKMALMAPT Trigger: GGTCGGAGCCATCAGCGCCATCTTCTGGGCCACCAAGTACTCACAGGACAACAAGGAGGAGTCCCTTTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CAA 72 bp | TGGATCAGGACTGTGAACAATTGGGGGCCCAGGAAGTaGACCAGGGAGATGACTCCAGGAGGCAAGTACTGG | + |
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Preference number: 6 (lower is better) Translates to: WIRTVNNWGPRK*TREMTPGGKYW Trigger: CCAGTACTTGCCTCCTGGAGTCATCTCCCTGGTCAACTTCCTGGGCCCCCAATTGTTCACAGTCCTGATCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS GCA 72 bp | TCTTCCAGCTCCATCTTCAGTTCATTGCTGATTTCGTaGTTCTTGATGGTGGCGGCTTCCCACACCCGGATG | + |
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Preference number: 6 (lower is better) Translates to: SSSSIFSSLLIS*FLMVAASHTRM Trigger: CATCCGGGTGTGGGAAGCCGCCACCATCAAGAAGCACGAAATCAGCAATGAACTGAAGATGGAGCTGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000119455.2 |
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| CDS GCA 72 bp | TCTTCCAGACACACCTTCAGTTCATTGCTGATTTCGTaGTTCTTGATGGTGGCGGCTTCCCACACCCGGATG | + |
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Preference number: 6 (lower is better) Translates to: SSRHTFSSLLIS*FLMVAASHTRM Trigger: CATCCGGGTGTGGGAAGCCGCCACCATCAAGAAGCACGAAATCAGCAATGAACTGAAGGTGTGTCTGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117781.8 |
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| CDS CAA 90 bp | CGAGGCAGGCTGACCAGGAAGGCGAAGGCCACGGTGAGCAGGAAGTaGAAGATGATTAACTTATATAATTCTTCGCCCACCGAGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RGRLTRKAKATVSRK*KMINLYNSSPTEFS Trigger: GGAGAACTCGGTGGGCGAAGAATTATATAAGTTAATCATCTTCAACTTCCTGCTCACCGTGGCCTTCGCCTTCCTGGTCAGCCTGCCTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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| CDS CAA 72 bp | TGCCCGTTAAAATATTCCAAAGTGGGTTGTGAAACCTaGGAATGTCACTCTGAGGCAGGGGGCTGCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: CPLKYSKVGCET*ECHSEAGGCWS Trigger: GCTCCAGCAGCCCCCTGCCTCAGAGTGACATTCCAAGGTTTCACAACCCACTTTGGAATATTTTAACGGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050874.14 ENSMUST00000106334.9 ENSMUST00000117781.8 ENSMUST00000119455.2 |
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