RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMC7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042246

Ensembl transcript IDs: ENSMUST00000044195.6

Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACACACACACATCTGACAAAGCACCCTTTATACACACACAGACATaGAAGCTACAACGAGTTTGCTTTGCTCCCAGAGGGAAGCCAATC +
Preference number: 1 (lower is better)
Translates to: DTHTSDKAPFIHTQT*KLQRVCFAPRGKPI
Trigger: GATTGGCTTCCCTCTGGGAGCAAAGCAAACTCGTTGTAGCTTCCATGTCTGTGTGTGTATAAAGGGTGCTTTGTCAGATGTGTGTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR CCA 90 bp CTGAAAAAGGAAGTCAGGTTTAATTTGAAGTCACCAGTGGCATCTTaGAGGGTATTCACTCGGCCTGGGAAGGCTTTCGGAGAAATCTCA +
Preference number: 1 (lower is better)
Translates to: LKKEVRFNLKSPVAS*RVFTRPGKAFGEIS
Trigger: TGAGATTTCTCCGAAAGCCTTCCCAGGCCGAGTGAATACCCTCCAAGATGCCACTGGTGACTTCAAATTAAACCTGACTTCCTTTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR CCA 90 bp TCTTTCAGGAATGAACAGCTCCATGCACGGAAGAGGAATAACACTTaGAAAACAGAGGAACTGCCTGTGCACCTTGCAAAGTTAAACCCC +
Preference number: 1 (lower is better)
Translates to: SFRNEQLHARKRNNT*KTEELPVHLAKLNP
Trigger: GGGGTTTAACTTTGCAAGGTGCACAGGCAGTTCCTCTGTTTTCCAAGTGTTATTCCTCTTCCGTGCATGGAGCTGTTCATTCCTGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR GCA 90 bp AAAGCACCCTTTATACACACACAGACATGGAAGCTACAACGAGTTTaGTTTGCTCCCAGAGGGAAGCCAATCATTTTTGAGGAACAAGGC +
Preference number: 1 (lower is better)
Translates to: KAPFIHTQTWKLQRV*FAPRGKPIIFEEQG
Trigger: GCCTTGTTCCTCAAAAATGATTGGCTTCCCTCTGGGAGCAAAGCAAACTCGTTGTAGCTTCCATGTCTGTGTGTGTATAAAGGGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR TCA 90 bp CACACACACAAAGTTTTAAACTCAGGCAAACAAAATCTAGCCCTTTaGCATGTGTACTTAAGTAATCAGAACCCAACCTTTGTTTGTATT +
Preference number: 1 (lower is better)
Translates to: HTHKVLNSGKQNLAL*HVYLSNQNPTFVCI
Trigger: AATACAAACAAAGGTTGGGTTCTGATTACTTAAGTACACATGTCAAAGGGCTAGATTTTGTTTGCCTGAGTTTAAAACTTTGTGTGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR CCA 90 bp CTGCCAGGACGGCCTCTCCACGTTCCTATCAGCTGTTCTAAGCCTCAGCATCTGGGAGTCACCACTCCCTaGGGATCAGGCTGGGGGTCA +
Preference number: 2 (lower is better)
Translates to: LPGRPLHVPISCSKPQHLGVTTP*GSGWGS
Trigger: TGACCCCCAGCCTGATCCCCAGGGAGTGGTGACTCC...CAGATGCTGAGGCTTAGAACAGCTGATAGGAACGTGGAGAGGCCGTCCTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR TCA 90 bp GCGGGGATGGATTTCCTTTCTGCCTTTCTGCCAGGACGGCCTCTCCACGTTCCTCTGATCGTGAGAGGCTaGGCAGCTCGAGAAGTTAAG +
Preference number: 2 (lower is better)
Translates to: AGMDFLSAFLPGRPLHVPLIVRG*AAREVK
Trigger: CTTAACTTCTCGAGCTGCTCAGCCTCTCACGATCAG...AGGAACGTGGAGAGGCCGTCCTGGCAGAAAGGCAGAAAGGAAATCCATCCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR CCA 90 bp CCTCTCCACGTTCCTATCAGCTGTTCTAAGCCTCAGCATCTGAAGATTCCTGCTCCCTGGGGATCAGGCTaGGGGTCAGCCTGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: PLHVPISCSKPQHLKIPAPWGSG*GSACLA
Trigger: AGCCAAACAGGCTGACCCCCAGCCTGATCCCCAGGG...AGCAGGAATCTTCAGATGCTGAGGCTTAGAACAGCTGATAGGAACGTGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR CCA 90 bp ACACACAGACATGGAAGCTACAACGAGTTTGCTTTGCTCCCAGAGGGAAGCCAATTCTTAGGAACAGGCTaGGCTGTGGACCTACACCTG +
Preference number: 2 (lower is better)
Translates to: THRHGSYNEFALLPEGSQFLGTG*AVDLHL
Trigger: CAGGTGTAGGTCCACAGCCCAGCCTGTTCCTAAGAA...TTGGCTTCCCTCTGGGAGCAAAGCAAACTCGTTGTAGCTTCCATGTCTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR GCA 90 bp AAGCACATGTTCCCACAGGAACAAAAATATCCCAGGTTAACAGCCTCATGGAAGTCCTTTCTGCCTTTCTaGCAGGACGGCCTCTCCACG +
Preference number: 2 (lower is better)
Translates to: KHMFPQEQKYPRLTASWKSFLPF*QDGLST
Trigger: CGTGGAGAGGCCGTCCTGGCAGAAAGGCAGAAAGGA...CTTCCATGAGGCTGTTAACCTGGGATATTTTTGTTCCTGTGGGAACATGTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR CCA 90 bp AACCCCTGCTCCTTAAACCCAGCTCCAATTCCAAAAAGCATATTGCAGCCTAGCCTGACTGGGCATGGGTaGGAATTCAAGTGTGATGGG +
Preference number: 2 (lower is better)
Translates to: NPCSLNPAPIPKSILQPSLTGHG*EFKCDG
Trigger: CCCATCACACTTGAATTCCCACCCATGCCCAGTCAG...GCTAGGCTGCAATATGCTTTTTGGAATTGGAGCTGGGTTTAAGGAGCAGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR CCA 90 bp ACACACAGACATGGAAGCTACAACGAGTTTGCTTTGCTCCCAGAGGGAAGCCAAGAAATTGGGGCCAGGTaGAGACTAAAGGCTAATGGC +
Preference number: 2 (lower is better)
Translates to: THRHGSYNEFALLPEGSQEIGAR*RLKANG
Trigger: GCCATTAGCCTTTAGTCTCCACCTGGCCCCAATTTC...TTGGCTTCCCTCTGGGAGCAAAGCAAACTCGTTGTAGCTTCCATGTCTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR CAA 90 bp AGCTACAACGAGTTTGCTTTGCTCCCAGAGGGAAGCCAATCATTTTaGAGGAACAAGGCAGTGATCAGAGCAGGGAAGTCCATCTTGGCA +
Preference number: 2 (lower is better)
Translates to: SYNEFALLPEGSQSF*RNKAVIRAGKSILA
Trigger: TGCCAAGATGGACTTCCCTGCTCTGATCACTGCCTTGTTCCTCAAAAATGATTGGCTTCCCTCTGGGAGCAAAGCAAACTCGTTGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR CAA 90 bp CACCCTTTATACACACACAGACATGGAAGCTACAACGAGTTTGCTTaGCTCCCAGAGGGAAGCCAATCATTTTTGAGGAACAAGGCAGTG +
Preference number: 2 (lower is better)
Translates to: HPLYTHRHGSYNEFA*LPEGSQSFLRNKAV
Trigger: CACTGCCTTGTTCCTCAAAAATGATTGGCTTCCCTCTGGGAGCAAAGCAAACTCGTTGTAGCTTCCATGTCTGTGTGTGTATAAAGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR GCA 90 bp ACACCCGTTAGAGAGCCGCACTTTAAAGCTATACAGACATTGCCTGGTTATTCCGTCCCATCACAGGACTaGAGTACATTGACAAAGACC +
Preference number: 2 (lower is better)
Translates to: TPVREPHFKAIQTLPGYSVPSQD*STLTKT
Trigger: GGTCTTTGTCAATGTACTGCAGTCCTGTGATGGGAC...GGAATAACCAGGCAATGTCTGTATAGCTTTAAAGTGCGGCTCTCTAACGGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR CCA 90 bp CCGTTAGAGAGCCGCACTTTAAAGCTATACAGACATTGCCTGGTTATTCCAAGTGGTACACAGCGGGGATaGATTTCCTTTCTGCCTTTC +
Preference number: 2 (lower is better)
Translates to: PLESRTLKLYRHCLVIPSGTQRG*ISFLPF
Trigger: GAAAGGCAGAAAGGAAATCCATCCCCGCTGTGTACC...ACTTGGAATAACCAGGCAATGTCTGTATAGCTTTAAAGTGCGGCTCTCTAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR GCA 90 bp ATGTTCCCACAGGAACAAAAATATCCCAGGTTAACAGCCTCATGGAAGATGACGACAACGAGTTTGCTTTaGTCCCAGAGGGAAGCCAAT +
Preference number: 2 (lower is better)
Translates to: MFPQEQKYPRLTASWKMTTTSLL*SQREAN
Trigger: ATTGGCTTCCCTCTGGGAGCAAAGCAAACTCGTTGT...CGTCATCTTCCATGAGGCTGTTAACCTGGGATATTTTTGTTCCTGTGGGAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR CCA 90 bp AAGCACATGTTCCCACAGGAACAAAAATATCCCAGGTTAACAGCCTCATGGAAGCCAAATCTTAGAAATTaGGGCCAGGTGGAGACTAAA +
Preference number: 2 (lower is better)
Translates to: KHMFPQEQKYPRLTASWKPNLRN*GQVETK
Trigger: TTTAGTCTCCACCTGGCCCCAATTTCTAAGATTTGG...CTTCCATGAGGCTGTTAACCTGGGATATTTTTGTTCCTGTGGGAACATGTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR TCA 90 bp CCGTTAGAGAGCCGCACTTTAAAGCTATACAGACATTGCCTGGTTATTCCAAGTAAGTCAGGTTTAATTTaGAGTCACCAGTGGCATCTT +
Preference number: 2 (lower is better)
Translates to: PLESRTLKLYRHCLVIPSKSGLI*SHQWHL
Trigger: AAGATGCCACTGGTGACTTCAAATTAAACCTGACTT...ACTTGGAATAACCAGGCAATGTCTGTATAGCTTTAAAGTGCGGCTCTCTAACGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR TCA 90 bp CCGTTAGAGAGCCGCACTTTAAAGCTATACAGACATTGCCTGGTTATTCCAAGTAGATTCCTGCTCATCTaGAAAAGGAAGTCAGGTTTA +
Preference number: 2 (lower is better)
Translates to: PLESRTLKLYRHCLVIPSRFLLI*KRKSGL
Trigger: TAAACCTGACTTCCTTTTTCAGATGAGCAGGAATCT...ACTTGGAATAACCAGGCAATGTCTGTATAGCTTTAAAGTGCGGCTCTCTAACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR GCA 90 bp CCGTTAGAGAGCCGCACTTTAAAGCTATACAGACATTGCCTGGTTATTCCAAGTGCATCTGAAGATTCCTaGTCATCTGAAAAAGGAAGT +
Preference number: 2 (lower is better)
Translates to: PLESRTLKLYRHCLVIPSASEDS*SSEKGS
Trigger: ACTTCCTTTTTCAGATGAGCAGGAATCTTCAGATGC...ACTTGGAATAACCAGGCAATGTCTGTATAGCTTTAAAGTGCGGCTCTCTAACGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR GCA 72 bp GGTACACAGCGGGGATGGATTTCCTTTCTGCCTTTCTaGCAGGACGGCCTCTCCACGTTCCTATCAGCTGTT +
Preference number: 3 (lower is better)
Translates to: GTQRGWISFLPF*QDGLSTFLSAV
Trigger: AACAGCTGATAGGAACGTGGAGAGGCCGTCCTGGCAGAAAGGCAGAAAGGAAATCCATCCCCGCTGTGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR CCA 72 bp CGAGAAGTTAAGTGTTTTGGTGGAGTCACCACTCCCTaGGGATCAGGCTGGGGGTCAGCCTGTTTGGCTAAG +
Preference number: 3 (lower is better)
Translates to: REVKCFGGVTTP*GSGWGSACLAK
Trigger: CTTAGCCAAACAGGCTGACCCCCAGCCTGATCCCCAGGGAGTGGTGACTCCACCAAAACACTTAACTTCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR TCA 72 bp GGTGATACTGACTGGGCATGGGTGGGAATTCAAGTGTaGTGGGGTACACAGCGGGGATGGATTTCCTTTCTG +
Preference number: 3 (lower is better)
Translates to: GDTDWAWVGIQV*WGTQRGWISFL
Trigger: CAGAAAGGAAATCCATCCCCGCTGTGTACCCCATCACACTTGAATTCCCACCCATGCCCAGTCAGTATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR CCA 72 bp GAAGTCAGGTTTAATTTGAAGTCACCAGTGGCATCTTaGAGGGTATTCACTCGGCCTGGGAAGGCTTTCGGA +
Preference number: 3 (lower is better)
Translates to: EVRFNLKSPVAS*RVFTRPGKAFG
Trigger: TCCGAAAGCCTTCCCAGGCCGAGTGAATACCCTCCAAGATGCCACTGGTGACTTCAAATTAAACCTGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR CAA 90 bp ACACCCGTTAGAGAGCCGCACTTTAAAGCTATACAGACATTGCCTGGTTATTCCTCCAAAAAGCTGAAATaGCCACCTGGCCTAGTCCTC +
Preference number: 3 (lower is better)
Translates to: TPVREPHFKAIQTLPGYSSKKLK*PPGLVL
Trigger: GAGGACTAGGCCAGGTGGCAATTTCAGCTTTTTGGA...GGAATAACCAGGCAATGTCTGTATAGCTTTAAAGTGCGGCTCTCTAACGGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR CAA 90 bp ACACCCGTTAGAGAGCCGCACTTTAAAGCTATACAGACATTGCCTGGTTATTCCTACAACGAGTTTGCTTaGCTCCCAGAGGGAAGCCAA +
Preference number: 3 (lower is better)
Translates to: TPVREPHFKAIQTLPGYSYNEFA*LPEGSQ
Trigger: TTGGCTTCCCTCTGGGAGCAAAGCAAACTCGTTGTA...GGAATAACCAGGCAATGTCTGTATAGCTTTAAAGTGCGGCTCTCTAACGGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR CAA 90 bp ATGTTCCCACAGGAACAAAAATATCCCAGGTTAACAGCCTCATGGAAGATGACGCATCAGAGCTATGTGTaGAGAAGTTTCGGGCAGCAT +
Preference number: 3 (lower is better)
Translates to: MFPQEQKYPRLTASWKMTHQSYV*RSFGQH
Trigger: ATGCTGCCCGAAACTTCTCAACACATAGCTCTGATG...CGTCATCTTCCATGAGGCTGTTAACCTGGGATATTTTTGTTCCTGTGGGAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR TCA 72 bp CTAACCAGTTGGCTAAGGTCACTTTCCCTGGAGGAGTaGACAAGGCTGGAGAAAAGTTCCAAAAAGCTGAAA +
Preference number: 3 (lower is better)
Translates to: LTSWLRSLSLEE*TRLEKSSKKLK
Trigger: TTTCAGCTTTTTGGAACTTTTCTCCAGCCTTGTTCACTCCTCCAGGGAAAGTGACCTTAGCCAACTGGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR CAA 90 bp ACACCCGTTAGAGAGCCGCACTTTAAAGCTATACAGACATTGCCTGGTTATTCCGAAGTCAGGTTTAATTaGAAGTCACCAGTGGCATCT +
Preference number: 3 (lower is better)
Translates to: TPVREPHFKAIQTLPGYSEVRFN*KSPVAS
Trigger: AGATGCCACTGGTGACTTCAAATTAAACCTGACTTC...GGAATAACCAGGCAATGTCTGTATAGCTTTAAAGTGCGGCTCTCTAACGGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR CCA 72 bp CTTTGTTTGTATTATGGGGCGTTCTTAGGAACAGGCTaGGCTGTGGACCTACACCTGAAATCATACATAAAA +
Preference number: 3 (lower is better)
Translates to: LCLYYGAFLGTG*AVDLHLKSYIK
Trigger: TTTTATGTATGATTTCAGGTGTAGGTCCACAGCCCAGCCTGTTCCTAAGAACGCCCCATAATACAAACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR-3UTR CAA 90 bp ATGTTCCCACAGGAACAAAAATATCCCAGGTTAACAGCCTCATGGAAGATGACGATTCCAAAAAGCATATaGCAGCCTAGCTCTGAATCA +
Preference number: 3 (lower is better)
Translates to: MFPQEQKYPRLTASWKMTIPKSI*QPSSES
Trigger: TGATTCAGAGCTAGGCTGCAATATGCTTTTTGGAAT...CGTCATCTTCCATGAGGCTGTTAACCTGGGATATTTTTGTTCCTGTGGGAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR TCA 72 bp TCACAGGACTGCAGTACATTGACAAAGACCTTAAAGTaGAAGCAGATCAAATTAGACACCACTAAAAGGGAC +
Preference number: 3 (lower is better)
Translates to: SQDCSTLTKTLK*KQIKLDTTKRD
Trigger: GTCCCTTTTAGTGGTGTCTAATTTGATCTGCTTTCACTTTAAGGTCTTTGTCAATGTACTGCAGTCCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR CCA 72 bp TCTTTGACGTTCAAAACACACAAACCTGCTTTTCTTTaGCTTCTTAATAGCCAAGAGGAGACAAGACTCATC +
Preference number: 3 (lower is better)
Translates to: SLTFKTHKPAFL*LLNSQEETRLI
Trigger: GATGAGTCTTGTCTCCTCTTGGCTATTAAGAAGCCAAAGAAAAGCAGGTTTGTGTGTTTTGAACGTCAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
3UTR TCA 72 bp AAAGTTTTAAACTCAGGCAAACAAAATCTAGCCCTTTaGCATGTGTACTTAAGTAATCAGAACCCAACCTTT +
Preference number: 3 (lower is better)
Translates to: KVLNSGKQNLAL*HVYLSNQNPTF
Trigger: AAAGGTTGGGTTCTGATTACTTAAGTACACATGTCAAAGGGCTAGATTTTGTTTGCCTGAGTTTAAAACTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR GCA 90 bp GCGGGGATGGATTTCCTTTCTGCCTTTCTGCCAGGACGGCCTCTCCACGTTCCTGCGAGCTGGGGAAGGTaGTCACAGTCTGAGGAATCA +
Preference number: 4 (lower is better)
Translates to: AGMDFLSAFLPGRPLHVPASWGR*SQSEES
Trigger: TGATTCCTCAGACTGTGAGCACCTTCCCCAGCTCGC...AGGAACGTGGAGAGGCCGTCCTGGCAGAAAGGCAGAAAGGAAATCCATCCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR TCA 90 bp GCGGGGATGGATTTCCTTTCTGCCTTTCTGCCAGGACGGCCTCTCCACGTTCCTAAGGTGCTCACAGTCTaGGGAATCACTTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: AGMDFLSAFLPGRPLHVPKVLTV*GITSQV
Trigger: CACCTGGGAAGTGATTCCTCAGACTGTGAGCACCTT...AGGAACGTGGAGAGGCCGTCCTGGCAGAAAGGCAGAAAGGAAATCCATCCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR TCA 90 bp GCGGGGATGGATTTCCTTTCTGCCTTTCTGCCAGGACGGCCTCTCCACGTTCCTCTCCGGACCTCCCTTTaGGCTTCTGTTAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: AGMDFLSAFLPGRPLHVPLRTSL*ASVSFW
Trigger: CCAGAAACTAACAGAAGCTCAAAGGGAGGTCCGGAG...AGGAACGTGGAGAGGCCGTCCTGGCAGAAAGGCAGAAAGGAAATCCATCCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR TCA 90 bp GGATCAGGCTGGGGGTCAGCCTGTTTGGCTAAGCCACCAAAAGTCACTTCCACTCACCGCGAAGGCTTCTaGTGTAACGGCATGGATCAG +
Preference number: 4 (lower is better)
Translates to: GSGWGSACLAKPPKVTSTHREGF*CNGMDQ
Trigger: CTGATCCATGCCGTTACATCAGAAGCCTTCGCGGTG...AGTGGAAGTGACTTTTGGTGGCTTAGCCAAACAGGCTGACCCCCAGCCTGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR GCA 90 bp AAGCCACCAAAAGTCACTTCCACTCAAACCCCAGGTGGACTCTGTAGGGTCATCGCATGGATCAGGGTCTaGAGCGAGCTGGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: KPPKVTSTQTPGGLCRVIAWIRV*SELGKV
Trigger: CACCTTCCCCAGCTCGCTGCAGACCCTGATCCATGC...GATGACCCTACAGAGTCCACCTGGGGTTTGAGTGGAAGTGACTTTTGGTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR TCA 90 bp ACACACAGACATGGAAGCTACAACGAGTTTGCTTTGCTCCCAGAGGGAAGCCAACCATGCTGCGGTTGGTaGTGCAGAAGTCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: THRHGSYNEFALLPEGSQPCCGW*CRSPSQ
Trigger: CTGGCTGGGACTTCTGCATCACCAACCGCAGCATGG...TTGGCTTCCCTCTGGGAGCAAAGCAAACTCGTTGTAGCTTCCATGTCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR TCA 90 bp TCCATGCACGGAAGAGGAATAACACTTGGAAAACAGAGGAACTGCCTGTGCACCTGGGCCGCAGGCTTTTaGGGAAGGGATGCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SMHGRGITLGKQRNCLCTWAAGF*GRDASH
Trigger: ATGGCTCGCATCCCTTCCTCAAAAGCCTGCGGCCCA...GGTGCACAGGCAGTTCCTCTGTTTTCCAAGTGTTATTCCTCTTCCGTGCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR GCA 90 bp ACACACAGACATGGAAGCTACAACGAGTTTGCTTTGCTCCCAGAGGGAAGCCAAGCCTCGGGGAGGGTCTaGAGGTGTAGAGAAGACTCA +
Preference number: 4 (lower is better)
Translates to: THRHGSYNEFALLPEGSQASGRV*RCREDS
Trigger: TGAGTCTTCTCTACACCTGCAGACCCTCCCCGAGGC...TTGGCTTCCCTCTGGGAGCAAAGCAAACTCGTTGTAGCTTCCATGTCTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CCA 90 bp CTGCCAGGACGGCCTCTCCACGTTCCTATCAGCTGTTCTAAGCCTCAGCATCTGCTGTACCGTTTCCACTaGTCCCACTCTGATAAATAC +
Preference number: 4 (lower is better)
Translates to: LPGRPLHVPISCSKPQHLLYRFH*SHSDKY
Trigger: GTATTTATCAGAGTGGGACCAGTGGAAACGGTACAG...CAGATGCTGAGGCTTAGAACAGCTGATAGGAACGTGGAGAGGCCGTCCTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CCA 90 bp AAGGTTAGGAGCCAGTGGAAAACAGTAAAGACTCCACAGTCCCATCACAGGACTATGGCGAATTCCTGCTaGCCCCAGCACTGGATCAGC +
Preference number: 4 (lower is better)
Translates to: KVRSQWKTVKTPQSHHRTMANSC*PQHWIS
Trigger: GCTGATCCAGTGCTGGGGCCAGCAGGAATTCGCCAT...AGTCCTGTGATGGGACTGTGGAGTCTTTACTGTTTTCCACTGGCTCCTAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CCA 90 bp ACACCCGTTAGAGAGCCGCACTTTAAAGCTATACAGACATTGCCTGGTTATTCCGGGTCTGCAGCGAGCTaGGGAAGGTGCTCACAGTCT +
Preference number: 4 (lower is better)
Translates to: TPVREPHFKAIQTLPGYSGSAAS*GRCSQS
Trigger: AGACTGTGAGCACCTTCCCCAGCTCGCTGCAGACCC...GGAATAACCAGGCAATGTCTGTATAGCTTTAAAGTGCGGCTCTCTAACGGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR GCA 90 bp TTTGCTTTGCTCCCAGAGGGAAGCCAATCATTTTTGAGGAACAAGGCAGTGATCTGCTGCGGATGTCTTTaGGCCACAGTTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: FALLPEGSQSFLRNKAVICCGCL*ATVPGG
Trigger: CCCACCTGGAACTGTGGCGCAAAGACATCCGCAGCA...GATCACTGCCTTGTTCCTCAAAAATGATTGGCTTCCCTCTGGGAGCAAAGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR GCA 90 bp ACCCAGCTCCAATTCCAAAAAGCATATTGCAGCCTAGCTCTGAATCACTCTGCAGCTCGTACCGCAAGCTaGTGTGCTTCAGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TQLQFQKAYCSLALNHSAARTAS*CASAQP
Trigger: TGGCTGAGCTGAAGCACAGCAGCTTGCGGTACGAGC...TGCAGAGTGATTCAGAGCTAGGCTGCAATATGCTTTTTGGAATTGGAGCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR GCA 90 bp AAGCACATGTTCCCACAGGAACAAAAATATCCCAGGTTAACAGCCTCATGGAAGGGGATGGCGAATTCCTaGTGGCCCCAGCACTGGATC +
Preference number: 4 (lower is better)
Translates to: KHMFPQEQKYPRLTASWKGMANS*WPQHWI
Trigger: GATCCAGTGCTGGGGCCAGCAGGAATTCGCCATCCC...CTTCCATGAGGCTGTTAACCTGGGATATTTTTGTTCCTGTGGGAACATGTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CCA 90 bp AACCCCTGCTCCTTAAACCCAGCTCCAATTCCAAAAAGCATATTGCAGCCTAGCCGCCACAGTTCCAGGTaGGTTGTCATCTCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: NPCSLNPAPIPKSILQPSRHSSR*VVISRA
Trigger: AGCTCGAGAGATGACAACCCACCTGGAACTGTGGCG...GCTAGGCTGCAATATGCTTTTTGGAATTGGAGCTGGGTTTAAGGAGCAGGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR GCA 90 bp GAAGATGACGGAAATGATTGTGTAGAGCTTGAGGATATGAGTTCCGCCTCCAGATACCGCAAGCTGCTGTaGTTCAGCTCAGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: EDDGNDCVELEDMSSASRYRKLL*FSSAML
Trigger: CAGCATGGCTGAGCTGAAGCACAGCAGCTTGCGGTA...TCTGGAGGCGGAACTCATATCCTCAAGCTCTACACAATCATTTCCGTCATCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR GCA 90 bp CCGTTAGAGAGCCGCACTTTAAAGCTATACAGACATTGCCTGGTTATTCCAAGTTTGGATGCTCTGAACTaGCTCGGGGAGGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PLESRTLKLYRHCLVIPSLDALN*LGEGLQ
Trigger: CTGCAGACCCTCCCCGAGGCAGTTCAGAGCATCCAA...ACTTGGAATAACCAGGCAATGTCTGTATAGCTTTAAAGTGCGGCTCTCTAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR GCA 90 bp ACACACAGACATGGAAGCTACAACGAGTTTGCTTTGCTCCCAGAGGGAAGCCAAAACCACCTGCTTGTGTaGTCCAGCCAGTGCAATGAA +
Preference number: 4 (lower is better)
Translates to: THRHGSYNEFALLPEGSQNHLLV*SSQCNE
Trigger: TTCATTGCACTGGCTGGAGCACACAAGCAGGTGGTT...TTGGCTTCCCTCTGGGAGCAAAGCAAACTCGTTGTAGCTTCCATGTCTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CCA 90 bp AACCCCTGCTCCTTAAACCCAGCTCCAATTCCAAAAAGCATATTGCAGCCTAGCGCGGATCTCAAAGCCTaGCGAGTAATCCTCGTAGTG +
Preference number: 4 (lower is better)
Translates to: NPCSLNPAPIPKSILQPSADLKA*RVILVV
Trigger: CACTACGAGGATTACTCGCCAGGCTTTGAGATCCGC...GCTAGGCTGCAATATGCTTTTTGGAATTGGAGCTGGGTTTAAGGAGCAGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR TCA 90 bp TCACTTCCACTCAAACCCCAGGTGGACTCTGTAGGGTCATCAGAGCTATGTGTTTTCATTTGGGTTTCCTaGATGTCCCTTAGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: SLPLKPQVDSVGSSELCVFIWVS*MSLSLR
Trigger: GCGGAGACTAAGGGACATTCAGGAAACCCAAATGAA...AACACATAGCTCTGATGACCCTACAGAGTCCACCTGGGGTTTGAGTGGAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR TCA 90 bp TTAAACCCAGCTCCAATTCCAAAAAGCATATTGCAGCCTAGCTCTGAATCACTCTCTTGGAGCCCAGCGTaGACACCAGCACACAGATGG +
Preference number: 4 (lower is better)
Translates to: LNPAPIPKSILQPSSESLSWSPA*TPAHRW
Trigger: CCATCTGTGTGCTGGTGTTCACGCTGGGCTCCAAGA...GAGTGATTCAGAGCTAGGCTGCAATATGCTTTTTGGAATTGGAGCTGGGTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR GCA 90 bp AAGCCACCAAAAGTCACTTCCACTCAAACCCCAGGTGGACTCTGTAGGGTCATCCTCAGAGATGTTCAGTaGATACTTGCGGATGGATTG +
Preference number: 4 (lower is better)
Translates to: KPPKVTSTQTPGGLCRVILRDVQ*ILADGL
Trigger: CAATCCATCCGCAAGTATGCACTGAACATCTCTGAG...GATGACCCTACAGAGTCCACCTGGGGTTTGAGTGGAAGTGACTTTTGGTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CCA 90 bp CCTCTCCACGTTCCTATCAGCTGTTCTAAGCCTCAGCATCTGAAGATTCCTGCTATTCCTCCATCCAGCTaGCAACTGAAAGAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: PLHVPISCSKPQHLKIPAIPPSS*QLKESV
Trigger: GACAGACTCTTTCAGTTGCCAGCTGGATGGAGGAAT...AGCAGGAATCTTCAGATGCTGAGGCTTAGAACAGCTGATAGGAACGTGGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CCA 90 bp AAGCCACCAAAAGTCACTTCCACTCAAACCCCAGGTGGACTCTGTAGGGTCATCTACTTGCGGATGGATTaGCTGTTGAGGTTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: KPPKVTSTQTPGGLCRVIYLRMD*LLRFSV
Trigger: CACAGAAAACCTCAACAGCCAATCCATCCGCAAGTA...GATGACCCTACAGAGTCCACCTGGGGTTTGAGTGGAAGTGACTTTTGGTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CCA 90 bp ACACCCGTTAGAGAGCCGCACTTTAAAGCTATACAGACATTGCCTGGTTATTCCAATGGCAGGGAGGAGTaGGGAGAAGAAGGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: TPVREPHFKAIQTLPGYSNGREE*GEEGSN
Trigger: ATTGGAGCCTTCTTCTCCCCACTCCTCCCTGCCATT...GGAATAACCAGGCAATGTCTGTATAGCTTTAAAGTGCGGCTCTCTAACGGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR TCA 90 bp AAGCCACCAAAAGTCACTTCCACTCAAACCCCAGGTGGACTCTGTAGGGTCATCGGATACAGTGTGCACTaGATATCCATGTCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: KPPKVTSTQTPGGLCRVIGYSVH*ISMSLN
Trigger: GTTCAAAGACATGGATATTCAGTGCACACTGTATCC...GATGACCCTACAGAGTCCACCTGGGGTTTGAGTGGAAGTGACTTTTGGTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR GCA 90 bp GAAGATGACGGAAATGATTGTGTAGAGCTTGAGGATATGAGTTCCGCCTCCAGAAGGACTGGATCCCCGTaGCAAACTTTCCTTCAATGC +
Preference number: 4 (lower is better)
Translates to: EDDGNDCVELEDMSSASRRTGSP*QTFLQC
Trigger: GCATTGAAGGAAAGTTTGGCACGGGGATCCAGTCCT...TCTGGAGGCGGAACTCATATCCTCAAGCTCTACACAATCATTTCCGTCATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CCA 90 bp CCGTTAGAGAGCCGCACTTTAAAGCTATACAGACATTGCCTGGTTATTCCAAGTATTTCAAGGTGGCAATaGCAGGGAGGAGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PLESRTLKLYRHCLVIPSISRWQ*QGGVGR
Trigger: TCTCCCCACTCCTCCCTGCCATTGCCACCTTGAAAT...ACTTGGAATAACCAGGCAATGTCTGTATAGCTTTAAAGTGCGGCTCTCTAACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR GCA 90 bp ATTTTTGAGGAACAAGGCAGTGATCAGAGCAGGGAAGTCCATCTTGGCAGCTTTGAAGTTAGAATTGGATaGTCTGAACTGCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: IFEEQGSDQSREVHLGSFEVRIG*SELPRG
Trigger: TCCCCGAGGCAGTTCAGAGCATCCAATTCTAACTTC...AAAGCTGCCAAGATGGACTTCCCTGCTCTGATCACTGCCTTGTTCCTCAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CCA 90 bp ACCCAGCTCCAATTCCAAAAAGCATATTGCAGCCTAGCTCTGAATCACTCTGCAAAGTGTAAATGCGGATaGTCTCCTCTGAGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: TQLQFQKAYCSLALNHSAKCKCG*SPLRSF
Trigger: AAAGGACCTCAGAGGAGACCATCCGCATTTACACTT...TGCAGAGTGATTCAGAGCTAGGCTGCAATATGCTTTTTGGAATTGGAGCTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR TCA 90 bp AAGGTTAGGAGCCAGTGGAAAACAGTAAAGACTCCACAGTCCCATCACAGGACTAACTGTAGAAGTAAATaGGCCCAGAGCTACTTATTG +
Preference number: 4 (lower is better)
Translates to: KVRSQWKTVKTPQSHHRTNCRSK*AQSYLL
Trigger: CAATAAGTAGCTCTGGGCTCATTTACTTCTACAGTT...AGTCCTGTGATGGGACTGTGGAGTCTTTACTGTTTTCCACTGGCTCCTAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR GCA 90 bp CTCCAATTCCAAAAAGCATATTGCAGCCTAGCTCTGAATCACTCTGCATCTTTCGTGTGCTCCAGCCAGTaGAATGAAGTAGAACATGAC +
Preference number: 4 (lower is better)
Translates to: LQFQKAYCSLALNHSASFVCSSQ*NEVEHD
Trigger: GTCATGTTCTACTTCATTGCACTGGCTGGAGCACAC...GAAAGATGCAGAGTGATTCAGAGCTAGGCTGCAATATGCTTTTTGGAATTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CCA 90 bp AAGCACATGTTCCCACAGGAACAAAAATATCCCAGGTTAACAGCCTCATGGAAGAAGGAAGTTCACAGGTaGAGAGAAACAGCTAGAACC +
Preference number: 4 (lower is better)
Translates to: KHMFPQEQKYPRLTASWKKEVHR*RETART
Trigger: GGTTCTAGCTGTTTCTCTCCACCTGTGAACTTCCTT...CTTCCATGAGGCTGTTAACCTGGGATATTTTTGTTCCTGTGGGAACATGTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CCA 90 bp CTCCAATTCCAAAAAGCATATTGCAGCCTAGCTCTGAATCACTCTGCATCTTTCCTTGGCAAAGATGATTaGGGTAATGAAATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LQFQKAYCSLALNHSASFLGKDD*GNEIGQ
Trigger: CTGGCCAATTTCATTACCCCAATCATCTTTGCCAAG...GAAAGATGCAGAGTGATTCAGAGCTAGGCTGCAATATGCTTTTTGGAATTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR GCA 90 bp GAAGATGACGGAAATGATTGTGTAGAGCTTGAGGATATGAGTTCCGCCTCCAGATTATTGGATACAGTGTaGACTGAATATCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: EDDGNDCVELEDMSSASRLLDTV*TEYPCL
Trigger: AAGACATGGATATTCAGTGCACACTGTATCCAATAA...TCTGGAGGCGGAACTCATATCCTCAAGCTCTACACAATCATTTCCGTCATCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 90 bp GTTCACAGGTGGAGAGAAACAGCTAGAACCCAGAGACAGGTTCTCTaGGTGTACGGCCCGCTGCCGGCTGGACCCGTGGCCCGGGTCGCC +
Preference number: 5 (lower is better)
Translates to: VHRWRETARTQRQVL*VYGPLPAGPVARVA
Trigger: GGCGACCCGGGCCACGGGTCCAGCCGGCAGCGGGCCGTACACCCAGAGAACCTGTCTCTGGGTTCTAGCTGTTTCTCTCCACCTGTGAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp GCGGGGATGGATTTCCTTTCTGCCTTTCTGCCAGGACGGCCTCTCCACGTTCCTATGGGCCGCAGGCTTTaGAGGAAGGGATGCGAGCCA +
Preference number: 5 (lower is better)
Translates to: AGMDFLSAFLPGRPLHVPMGRRL*RKGCEP
Trigger: TGGCTCGCATCCCTTCCTCAAAAGCCTGCGGCCCAT...AGGAACGTGGAGAGGCCGTCCTGGCAGAAAGGCAGAAAGGAAATCCATCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 90 bp GCAGGGAGGAGTGGGGAGAAGAAGGCTCCAATCCAACAGATGGTCTaGCCGTACACGATGCCCAGGACATTGTCGGGGATGGCGAATTCC +
Preference number: 5 (lower is better)
Translates to: AGRSGEKKAPIQQMV*PYTMPRTLSGMANS
Trigger: GGAATTCGCCATCCCCGACAATGTCCTGGGCATCGTGTACGGGCAGACCATCTGTTGGATTGGAGCCTTCTTCTCCCCACTCCTCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 90 bp AACAGATGGTCTGCCCGTACACGATGCCCAGGACATTGTCGGGGATaGCGAATTCCTGCTGGCCCCAGCACTGGATCAGCTTTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: NRWSARTRCPGHCRG*RIPAGPSTGSALRR
Trigger: CCTCCTCAAAGCTGATCCAGTGCTGGGGCCAGCAGGAATTCGCCATCCCCGACAATGTCCTGGGCATCGTGTACGGGCAGACCATCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp GCGGGGATGGATTTCCTTTCTGCCTTTCTGCCAGGACGGCCTCTCCACGTTCCTCCACAGGATGTGATCTaGGAGCCCAGCGTGAACACC +
Preference number: 5 (lower is better)
Translates to: AGMDFLSAFLPGRPLHVPPQDVI*EPSVNT
Trigger: GGTGTTCACGCTGGGCTCCAAGATCACATCCTGTGG...AGGAACGTGGAGAGGCCGTCCTGGCAGAAAGGCAGAAAGGAAATCCATCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 90 bp CTCTCTTCTTCCAGATCTGCTCGGAGCTCGTACCGCAAGCTGCTGTaGTTCAGCTCAGCCATGCTGCGGTTGGTGATGCAGAAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: LSSSRSARSSYRKLL*FSSAMLRLVMQKSQ
Trigger: CTGGGACTTCTGCATCACCAACCGCAGCATGGCTGAGCTGAAGCACAGCAGCTTGCGGTACGAGCTCCGAGCAGATCTGGAAGAAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp CTGCCAGGACGGCCTCTCCACGTTCCTATCAGCTGTTCTAAGCCTCAGCATCTGATGCTGCGGATGTCTTaGCGCCACAGTTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LPGRPLHVPISCSKPQHLMLRMS*RHSSRW
Trigger: CCACCTGGAACTGTGGCGCAAAGACATCCGCAGCAT...CAGATGCTGAGGCTTAGAACAGCTGATAGGAACGTGGAGAGGCCGTCCTGGCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS TCA 90 bp GCATGGATCAGGGTCTGCAGCGAGCTGGGGAAGGTGCTCACAGTCTaGGGAATCACTTCCCAGGTGGTGTTGAAGTTGGTAAATGGGCCG +
Preference number: 5 (lower is better)
Translates to: AWIRVCSELGKVLTV*GITSQVVLKLVNGP
Trigger: CGGCCCATTTACCAACTTCAACACCACCTGGGAAGTGATTCCTCAGACTGTGAGCACCTTCCCCAGCTCGCTGCAGACCCTGATCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp GGATCAGGCTGGGGGTCAGCCTGTTTGGCTAAGCCACCAAAAGTCACTTCCACTCAGGTGGTGTTGAAGTaGGTAAATGGGCCGCAGGCT +
Preference number: 5 (lower is better)
Translates to: GSGWGSACLAKPPKVTSTQVVLK*VNGPQA
Trigger: AGCCTGCGGCCCATTTACCAACTTCAACACCACCTG...AGTGGAAGTGACTTTTGGTGGCTTAGCCAAACAGGCTGACCCCCAGCCTGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp GGGCATGGGTGGGAATTCAAGTGTGATGGGGTACACAGCGGGGATGGATTTCCTTGTACAACCACCTGCTaGTGTGCTCCAGCCAGTGCA +
Preference number: 5 (lower is better)
Translates to: GHGWEFKCDGVHSGDGFPCTTTC*CAPASA
Trigger: TGCACTGGCTGGAGCACACAAGCAGGTGGTTGTACA...AGGAAATCCATCCCCGCTGTGTACCCCATCACACTTGAATTCCCACCCATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS TCA 90 bp CATGACAAGGCAGATGATCATGAAGAAAGGCACCGCGAAGGCTTCTaGTGTAACGGCATGGATCAGGGTCTGCAGCGAGCTGGGGAAGGT +
Preference number: 5 (lower is better)
Translates to: HDKADDHEERHREGF*CNGMDQGLQRAGEG
Trigger: ACCTTCCCCAGCTCGCTGCAGACCCTGATCCATGCCGTTACATCAGAAGCCTTCGCGGTGCCTTTCTTCATGATCATCTGCCTTGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 90 bp AGCTGGCAACTGAAAGAGTCTGTCGGCTTCAGCAGGGTGCCACTTTaGTTGTCCCGAGAGAGGATGTTTGTTCTCCTACGTGCCACTGAC +
Preference number: 5 (lower is better)
Translates to: SWQLKESVGFSRVPL*LSRERMFVLLRATD
Trigger: GTCAGTGGCACGTAGGAGAACAAACATCCTCTCTCGGGACAAGCAAAGTGGCACCCTGCTGAAGCCGACAGACTCTTTCAGTTGCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 90 bp GCACCACCAGGAACCGCAGGAATGAGAAGTAGGACTGGATCCCCGTaGCAAACTTTCCTTCAATGCTGCGGATGTCTTTGCGCCACAGTT +
Preference number: 5 (lower is better)
Translates to: APPGTAGMRSRTGSP*QTFLQCCGCLCATV
Trigger: AACTGTGGCGCAAAGACATCCGCAGCATTGAAGGAAAGTTTGGCACGGGGATCCAGTCCTACTTCTCATTCCTGCGGTTCCTGGTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS TCA 90 bp CACTTCCCAGGTGGTGTTGAAGTTGGTAAATGGGCCGCAGGCTTTTaGGGAAGGGATGCGAGCCATGCTGATGGTCAGAGGTATGATTGC +
Preference number: 5 (lower is better)
Translates to: HFPGGVEVGKWAAGF*GRDASHADGQRYDC
Trigger: GCAATCATACCTCTGACCATCAGCATGGCTCGCATCCCTTCCTCAAAAGCCTGCGGCCCATTTACCAACTTCAACACCACCTGGGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp GCGGGGATGGATTTCCTTTCTGCCTTTCTGCCAGGACGGCCTCTCCACGTTCCTATACTTGCGGATGGATaGGCTGTTGAGGTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: AGMDFLSAFLPGRPLHVPILADG*AVEVFC
Trigger: ACAGAAAACCTCAACAGCCAATCCATCCGCAAGTAT...AGGAACGTGGAGAGGCCGTCCTGGCAGAAAGGCAGAAAGGAAATCCATCCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 90 bp ACTGGATCCCCGTGCCAAACTTTCCTTCAATGCTGCGGATGTCTTTaGGCCACAGTTCCAGGTGGGTTGTCATCTCTCGAGCTTTCTCTA +
Preference number: 5 (lower is better)
Translates to: TGSPCQTFLQCCGCL*ATVPGGLSSLELSL
Trigger: TAGAGAAAGCTCGAGAGATGACAACCCACCTGGAACTGTGGCGCAAAGACATCCGCAGCATTGAAGGAAAGTTTGGCACGGGGATCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 90 bp ATGAGAAGTAGGACTGGATCCCCGTGCCAAACTTTCCTTCAATGCTaGGGATGTCTTTGCGCCACAGTTCCAGGTGGGTTGTCATCTCTC +
Preference number: 5 (lower is better)
Translates to: MRSRTGSPCQTFLQC*GCLCATVPGGLSSL
Trigger: GAGAGATGACAACCCACCTGGAACTGTGGCGCAAAGACATCCGCAGCATTGAAGGAAAGTTTGGCACGGGGATCCAGTCCTACTTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 90 bp GGAATGAGAAGTAGGACTGGATCCCCGTGCCAAACTTTCCTTCAATaGTGCGGATGTCTTTGCGCCACAGTTCCAGGTGGGTTGTCATCT +
Preference number: 5 (lower is better)
Translates to: GMRSRTGSPCQTFLQ*CGCLCATVPGGLSS
Trigger: AGATGACAACCCACCTGGAACTGTGGCGCAAAGACATCCGCAGCATTGAAGGAAAGTTTGGCACGGGGATCCAGTCCTACTTCTCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS TCA 90 bp ACTTTGCTTGTCCCGAGAGAGGATGTTTGTTCTCCTACGTGCCACTaGCCGATAGCTTGGCAGCTCTTGAAGGAAGTTCACAGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: TLLVPREDVCSPTCH*PIAWQLLKEVHRWR
Trigger: TCTCCACCTGTGAACTTCCTTCAAGAGCTGCCAAGCTATCGGTCAGTGGCACGTAGGAGAACAAACATCCTCTCTCGGGACAAGCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 90 bp AACTTTCCTTCAATGCTGCGGATGTCTTTGCGCCACAGTTCCAGGTaGGTTGTCATCTCTCGAGCTTTCTCTAGGAACCTCTTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: NFPSMLRMSLRHSSR*VVISRAFSRNLFQD
Trigger: GTCCTGGAAGAGGTTCCTAGAGAAAGCTCGAGAGATGACAACCCACCTGGAACTGTGGCGCAAAGACATCCGCAGCATTGAAGGAAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp TCCATGCACGGAAGAGGAATAACACTTGGAAAACAGAGGAACTGCCTGTGCACCAACCTCTTCCAGGACTaGCTGCTGTACCGTTTCCAC +
Preference number: 5 (lower is better)
Translates to: SMHGRGITLGKQRNCLCTNLFQD*LLYRFH
Trigger: GTGGAAACGGTACAGCAGCAAGTCCTGGAAGAGGTT...GGTGCACAGGCAGTTCCTCTGTTTTCCAAGTGTTATTCCTCTTCCGTGCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp ACCCAGCTCCAATTCCAAAAAGCATATTGCAGCCTAGCTCTGAATCACTCTGCATCAGCCATGCTGCGGTaGGTGATGCAGAAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: TQLQFQKAYCSLALNHSASAMLR*VMQKSQ
Trigger: CTGGGACTTCTGCATCACCAACCGCAGCATGGCTGA...TGCAGAGTGATTCAGAGCTAGGCTGCAATATGCTTTTTGGAATTGGAGCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 90 bp AGTCTCCGCTTCTCAGAGATGTTCAGTGCATACTTGCGGATGGATTaGCTGTTGAGGTTTTCTGTGATTCCTCCATCCAGCTGGCAACTG +
Preference number: 5 (lower is better)
Translates to: SLRFSEMFSAYLRMD*LLRFSVIPPSSWQL
Trigger: CAGTTGCCAGCTGGATGGAGGAATCACAGAAAACCTCAACAGCCAATCCATCCGCAAGTATGCACTGAACATCTCTGAGAAGCGGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 90 bp GGGTTGTCATCTCTCGAGCTTTCTCTAGGAACCTCTTCCAGGACTTaGTGCTGTACCGTTTCCACTGGTCCCACTCTGATAAATACTTCA +
Preference number: 5 (lower is better)
Translates to: GLSSLELSLGTSSRT*CCTVSTGPTLINTS
Trigger: TGAAGTATTTATCAGAGTGGGACCAGTGGAAACGGTACAGCAGCAAGTCCTGGAAGAGGTTCCTAGAGAAAGCTCGAGAGATGACAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 90 bp GCCTGGCGAGTAATCCTCGTAGTGGATGATCTTGGCAAAGATGATTaGGGTAATGAAATTGGCCAGGGTAATCACAATGGACGGGAGGTA +
Preference number: 5 (lower is better)
Translates to: AWRVILVVDDLGKDD*GNEIGQGNHNGREV
Trigger: TACCTCCCGTCCATTGTGATTACCCTGGCCAATTTCATTACCCCAATCATCTTTGCCAAGATCATCCACTACGAGGATTACTCGCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 90 bp CCGCATAAAGACACACCTAAGAATCGTCAGGCGGATCTCAAAGCCTaGCGAGTAATCCTCGTAGTGGATGATCTTGGCAAAGATGATTGG +
Preference number: 5 (lower is better)
Translates to: PHKDTPKNRQADLKA*RVILVVDDLGKDDW
Trigger: CCAATCATCTTTGCCAAGATCATCCACTACGAGGATTACTCGCCAGGCTTTGAGATCCGCCTGACGATTCTTAGGTGTGTCTTTATGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 90 bp ATAAAAGATGATAACGAATTTCAAGGTGGCAATGGCAGGGAGGAGTaGGGAGAAGAAGGCTCCAATCCAACAGATGGTCTGCCCGTACAC +
Preference number: 5 (lower is better)
Translates to: IKDDNEFQGGNGREE*GEEGSNPTDGLPVH
Trigger: GTGTACGGGCAGACCATCTGTTGGATTGGAGCCTTCTTCTCCCCACTCCTCCCTGCCATTGCCACCTTGAAATTCGTTATCATCTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp AACCCCTGCTCCTTAAACCCAGCTCCAATTCCAAAAAGCATATTGCAGCCTAGCACAGTTCCAGGTGGGTaGTCATCTCTCGAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: NPCSLNPAPIPKSILQPSTVPGG*SSLELS
Trigger: AGAAAGCTCGAGAGATGACAACCCACCTGGAACTGT...GCTAGGCTGCAATATGCTTTTTGGAATTGGAGCTGGGTTTAAGGAGCAGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp AACCCCTGCTCCTTAAACCCAGCTCCAATTCCAAAAAGCATATTGCAGCCTAGCCGAATCAGGTTGATCTaGAACCCTTCCACCGACCTT +
Preference number: 5 (lower is better)
Translates to: NPCSLNPAPIPKSILQPSRIRLI*NPSTDL
Trigger: AAGGTCGGTGGAAGGGTTCAAGATCAACCTGATTCG...GCTAGGCTGCAATATGCTTTTTGGAATTGGAGCTGGGTTTAAGGAGCAGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp ACCCAGCTCCAATTCCAAAAAGCATATTGCAGCCTAGCTCTGAATCACTCTGCAACTTCCCAGGTGGTGTaGAAGTTGGTAAATGGGCCG +
Preference number: 5 (lower is better)
Translates to: TQLQFQKAYCSLALNHSATSQVV*KLVNGP
Trigger: CGGCCCATTTACCAACTTCAACACCACCTGGGAAGT...TGCAGAGTGATTCAGAGCTAGGCTGCAATATGCTTTTTGGAATTGGAGCTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS TCA 90 bp GGTAGGCAATCGTGCTTATCAAGTAAGCCAGGGGCAGGTCATACGTaGAGCTCTGGAACTTTACACCATCAATGGTGTAGTGCCCATAAA +
Preference number: 5 (lower is better)
Translates to: GRQSCLSSKPGAGHT*SSGTLHHQWCSAHK
Trigger: TTTATGGGCACTACACCATTGATGGTGTAAAGTTCCAGAGCTTCACGTATGACCTGCCCCTGGCTTACTTGATAAGCACGATTGCCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 90 bp TTGTCATCTCTCGAGCTTTCTCTAGGAACCTCTTCCAGGACTTGCTaGTGTACCGTTTCCACTGGTCCCACTCTGATAAATACTTCATTT +
Preference number: 5 (lower is better)
Translates to: LSSLELSLGTSSRTC*CTVSTGPTLINTSF
Trigger: AAATGAAGTATTTATCAGAGTGGGACCAGTGGAAACGGTACAGCAGCAAGTCCTGGAAGAGGTTCCTAGAGAAAGCTCGAGAGATGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 90 bp CTAGGTAGATTGCATAAAAGCATGCCGCTAGCACAGCAAGCACAATaGAGTTCAAAAACAGCCTCAAAGTGTAAATGCGGATGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: LGRLHKSMPLAQQAQ*SSKTASKCKCGWSP
Trigger: AGGAGACCATCCGCATTTACACTTTGAGGCTGTTTTTGAACTGCATTGTGCTTGCTGTGCTAGCGGCATGCTTTTATGCAATCTACCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp CTCCAATTCCAAAAAGCATATTGCAGCCTAGCTCTGAATCACTCTGCATCTTTCATAGCTTGGCAGCTCTaGAAGGAAGTTCACAGGTGG +
Preference number: 5 (lower is better)
Translates to: LQFQKAYCSLALNHSASFIAWQL*KEVHRW
Trigger: CCACCTGTGAACTTCCTTCAAGAGCTGCCAAGCTAT...GAAAGATGCAGAGTGATTCAGAGCTAGGCTGCAATATGCTTTTTGGAATTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp ATGTTCCCACAGGAACAAAAATATCCCAGGTTAACAGCCTCATGGAAGATGACGCGGATGGATTGGCTGTaGAGGTTTTCTGTGATTCCT +
Preference number: 5 (lower is better)
Translates to: MFPQEQKYPRLTASWKMTRMDWL*RFSVIP
Trigger: AGGAATCACAGAAAACCTCAACAGCCAATCCATCCG...CGTCATCTTCCATGAGGCTGTTAACCTGGGATATTTTTGTTCCTGTGGGAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp ATGTTCCCACAGGAACAAAAATATCCCAGGTTAACAGCCTCATGGAAGATGACGGCCCAGAGCTACTTATaGGATACAGTGTGCACTGAA +
Preference number: 5 (lower is better)
Translates to: MFPQEQKYPRLTASWKMTAQSYL*DTVCTE
Trigger: TTCAGTGCACACTGTATCCAATAAGTAGCTCTGGGC...CGTCATCTTCCATGAGGCTGTTAACCTGGGATATTTTTGTTCCTGTGGGAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp AAGCACATGTTCCCACAGGAACAAAAATATCCCAGGTTAACAGCCTCATGGAAGTCGAAGATCATCAGCTaGTACATTTCCTGTCCCACC +
Preference number: 5 (lower is better)
Translates to: KHMFPQEQKYPRLTASWKSKIIS*YISCPT
Trigger: GGTGGGACAGGAAATGTACAAGCTGATGATCTTCGA...CTTCCATGAGGCTGTTAACCTGGGATATTTTTGTTCCTGTGGGAACATGTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp TTAAACCCAGCTCCAATTCCAAAAAGCATATTGCAGCCTAGCTCTGAATCACTCCAGTTGCTAGGTAGATaGCATAAAAGCATGCCGCTA +
Preference number: 5 (lower is better)
Translates to: LNPAPIPKSILQPSSESLQLLGR*HKSMPL
Trigger: TAGCGGCATGCTTTTATGCAATCTACCTAGCAACTG...GAGTGATTCAGAGCTAGGCTGCAATATGCTTTTTGGAATTGGAGCTGGGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS-3UTR CAA 90 bp AAGCACATGTTCCCACAGGAACAAAAATATCCCAGGTTAACAGCCTCATGGAAGAAGAAGAAGTTAGAATaGGATGCTCTGAACTGCCTC +
Preference number: 5 (lower is better)
Translates to: KHMFPQEQKYPRLTASWKKKKLE*DALNCL
Trigger: GAGGCAGTTCAGAGCATCCAATTCTAACTTCTTCTT...CTTCCATGAGGCTGTTAACCTGGGATATTTTTGTTCCTGTGGGAACATGTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 72 bp GAGACAGGTTCTCTGGGTGTACGGCCCGCTGCCGGCTaGACCCGTGGCCCGGGTCGCCCGCGCTGCCCTCGC +
Preference number: 6 (lower is better)
Translates to: ETGSLGVRPAAG*TRGPGRPRCPR
Trigger: GCGAGGGCAGCGCGGGCGACCCGGGCCACGGGTCCAGCCGGCAGCGGGCCGTACACCCAGAGAACCTGTCTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 72 bp TCTGCCCGTACACGATGCCCAGGACATTGTCGGGGATaGCGAATTCCTGCTGGCCCCAGCACTGGATCAGCT +
Preference number: 6 (lower is better)
Translates to: SARTRCPGHCRG*RIPAGPSTGSA
Trigger: AGCTGATCCAGTGCTGGGGCCAGCAGGAATTCGCCATCCCCGACAATGTCCTGGGCATCGTGTACGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 72 bp TCCAGATCTGCTCGGAGCTCGTACCGCAAGCTGCTGTaGTTCAGCTCAGCCATGCTGCGGTTGGTGATGCAG +
Preference number: 6 (lower is better)
Translates to: SRSARSSYRKLL*FSSAMLRLVMQ
Trigger: CTGCATCACCAACCGCAGCATGGCTGAGCTGAAGCACAGCAGCTTGCGGTACGAGCTCCGAGCAGATCTGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 72 bp ACGATGCCCAGGACATTGTCGGGGATGGCGAATTCCTaGTGGCCCCAGCACTGGATCAGCTTTGAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: TMPRTLSGMANS*WPQHWISFEEA
Trigger: TGCCTCCTCAAAGCTGATCCAGTGCTGGGGCCAGCAGGAATTCGCCATCCCCGACAATGTCCTGGGCATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 72 bp CGGCATGGATCAGGGTCTGCAGCGAGCTGGGGAAGGTaGTCACAGTCTGAGGAATCACTTCCCAGGTGGTGT +
Preference number: 6 (lower is better)
Translates to: RHGSGSAASWGR*SQSEESLPRWC
Trigger: ACACCACCTGGGAAGTGATTCCTCAGACTGTGAGCACCTTCCCCAGCTCGCTGCAGACCCTGATCCATGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 72 bp ATGCCCAGGACATTGTCGGGGATGGCGAATTCCTGCTaGCCCCAGCACTGGATCAGCTTTGAGGAGGCACAG +
Preference number: 6 (lower is better)
Translates to: MPRTLSGMANSC*PQHWISFEEAQ
Trigger: CTGTGCCTCCTCAAAGCTGATCCAGTGCTGGGGCCAGCAGGAATTCGCCATCCCCGACAATGTCCTGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 72 bp GGAGGAGTGGGGAGAAGAAGGCTCCAATCCAACAGATaGTCTGCCCGTACACGATGCCCAGGACATTGTCGG +
Preference number: 6 (lower is better)
Translates to: GGVGRRRLQSNR*SARTRCPGHCR
Trigger: CCGACAATGTCCTGGGCATCGTGTACGGGCAGACCATCTGTTGGATTGGAGCCTTCTTCTCCCCACTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 72 bp AAGAAAGGCACCGCGAAGGCTTCTGATGTAACGGCATaGATCAGGGTCTGCAGCGAGCTGGGGAAGGTGCTC +
Preference number: 6 (lower is better)
Translates to: KKGTAKASDVTA*IRVCSELGKVL
Trigger: GAGCACCTTCCCCAGCTCGCTGCAGACCCTGATCCATGCCGTTACATCAGAAGCCTTCGCGGTGCCTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS TCA 72 bp GGTGGTGTTGAAGTTGGTAAATGGGCCGCAGGCTTTTaGGGAAGGGATGCGAGCCATGCTGATGGTCAGAGG +
Preference number: 6 (lower is better)
Translates to: GGVEVGKWAAGF*GRDASHADGQR
Trigger: CCTCTGACCATCAGCATGGCTCGCATCCCTTCCTCAAAAGCCTGCGGCCCATTTACCAACTTCAACACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 72 bp AGGACTGGATCCCCGTGCCAAACTTTCCTTCAATGCTaGGGATGTCTTTGCGCCACAGTTCCAGGTGGGTTG +
Preference number: 6 (lower is better)
Translates to: RTGSPCQTFLQC*GCLCATVPGGL
Trigger: CAACCCACCTGGAACTGTGGCGCAAAGACATCCGCAGCATTGAAGGAAAGTTTGGCACGGGGATCCAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp GCAGGGTGCCACTTTGCTTGTCCCGAGAGAGGATGTTaGTTCTCCTACGTGCCACTGACCGATAGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: AGCHFACPERGC*FSYVPLTDSLA
Trigger: TGCCAAGCTATCGGTCAGTGGCACGTAGGAGAACAAACATCCTCTCTCGGGACAAGCAAAGTGGCACCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp CAGAGTTCACACGTGCTGTCACCACAGGATGTGATCTaGGAGCCCAGCGTGAACACCAGCACACAGATGGTG +
Preference number: 6 (lower is better)
Translates to: QSSHVLSPQDVI*EPSVNTSTQMV
Trigger: CACCATCTGTGTGCTGGTGTTCACGCTGGGCTCCAAGATCACATCCTGTGGTGACAGCACGTGTGAACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 90 bp TCGGCTTCAGCAGGGTGCCACTTTGCTTGTCCCGAGAGAGGATGTTaGTTCTCCTACGTGCCACTGACCGATAGCTTGGCAGCTCTTGAA +
Preference number: 6 (lower is better)
Translates to: SASAGCHFACPERGC*FSYVPLTDSLAALE
Trigger: TTCAAGAGCTGCCAAGCTATCGGTCAGTGGCACGTAGGAGAACAAACATCCTCTCTCGGGACAAGCAAAGTGGCACCCTGCTGAAGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 90 bp TGGCAACTGAAAGAGTCTGTCGGCTTCAGCAGGGTGCCACTTTGCTaGTCCCGAGAGAGGATGTTTGTTCTCCTACGTGCCACTGACCGA +
Preference number: 6 (lower is better)
Translates to: WQLKESVGFSRVPLC*SRERMFVLLRATDR
Trigger: TCGGTCAGTGGCACGTAGGAGAACAAACATCCTCTCTCGGGACAAGCAAAGTGGCACCCTGCTGAAGCCGACAGACTCTTTCAGTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 72 bp CCGTGCCAAACTTTCCTTCAATGCTGCGGATGTCTTTaGGCCACAGTTCCAGGTGGGTTGTCATCTCTCGAG +
Preference number: 6 (lower is better)
Translates to: PCQTFLQCCGCL*ATVPGGLSSLE
Trigger: CTCGAGAGATGACAACCCACCTGGAACTGTGGCGCAAAGACATCCGCAGCATTGAAGGAAAGTTTGGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp AAAGAGTCTGTCGGCTTCAGCAGGGTGCCACTTTGCTaGTCCCGAGAGAGGATGTTTGTTCTCCTACGTGCC +
Preference number: 6 (lower is better)
Translates to: KESVGFSRVPLC*SRERMFVLLRA
Trigger: GGCACGTAGGAGAACAAACATCCTCTCTCGGGACAAGCAAAGTGGCACCCTGCTGAAGCCGACAGACTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp TGCTGCGGATGTCTTTGCGCCACAGTTCCAGGTGGGTaGTCATCTCTCGAGCTTTCTCTAGGAACCTCTTCC +
Preference number: 6 (lower is better)
Translates to: CCGCLCATVPGG*SSLELSLGTSS
Trigger: GGAAGAGGTTCCTAGAGAAAGCTCGAGAGATGACAACCCACCTGGAACTGTGGCGCAAAGACATCCGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp CCCGTGCCAAACTTTCCTTCAATGCTGCGGATGTCTTaGCGCCACAGTTCCAGGTGGGTTGTCATCTCTCGA +
Preference number: 6 (lower is better)
Translates to: PVPNFPSMLRMS*RHSSRWVVISR
Trigger: TCGAGAGATGACAACCCACCTGGAACTGTGGCGCAAAGACATCCGCAGCATTGAAGGAAAGTTTGGCACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 90 bp GACTGGATCCCCGTGCCAAACTTTCCTTCAATGCTGCGGATGTCTTaGCGCCACAGTTCCAGGTGGGTTGTCATCTCTCGAGCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: DWIPVPNFPSMLRMS*RHSSRWVVISRAFS
Trigger: AGAGAAAGCTCGAGAGATGACAACCCACCTGGAACTGTGGCGCAAAGACATCCGCAGCATTGAAGGAAAGTTTGGCACGGGGATCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS TCA 72 bp GTCCCGAGAGAGGATGTTTGTTCTCCTACGTGCCACTaGCCGATAGCTTGGCAGCTCTTGAAGGAAGTTCAC +
Preference number: 6 (lower is better)
Translates to: VPREDVCSPTCH*PIAWQLLKEVH
Trigger: GTGAACTTCCTTCAAGAGCTGCCAAGCTATCGGTCAGTGGCACGTAGGAGAACAAACATCCTCTCTCGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 72 bp CTGAAAGAGTCTGTCGGCTTCAGCAGGGTGCCACTTTaGTTGTCCCGAGAGAGGATGTTTGTTCTCCTACGT +
Preference number: 6 (lower is better)
Translates to: LKESVGFSRVPL*LSRERMFVLLR
Trigger: ACGTAGGAGAACAAACATCCTCTCTCGGGACAAGCAAAGTGGCACCCTGCTGAAGCCGACAGACTCTTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 72 bp GGAACCGCAGGAATGAGAAGTAGGACTGGATCCCCGTaGCAAACTTTCCTTCAATGCTGCGGATGTCTTTGC +
Preference number: 6 (lower is better)
Translates to: GTAGMRSRTGSP*QTFLQCCGCLC
Trigger: GCAAAGACATCCGCAGCATTGAAGGAAAGTTTGGCACGGGGATCCAGTCCTACTTCTCATTCCTGCGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 72 bp TGGCTGTTGAGGTTTTCTGTGATTCCTCCATCCAGCTaGCAACTGAAAGAGTCTGTCGGCTTCAGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: WLLRFSVIPPSS*QLKESVGFSRV
Trigger: CACCCTGCTGAAGCCGACAGACTCTTTCAGTTGCCAGCTGGATGGAGGAATCACAGAAAACCTCAACAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 72 bp TCAATGCTGCGGATGTCTTTGCGCCACAGTTCCAGGTaGGTTGTCATCTCTCGAGCTTTCTCTAGGAACCTC +
Preference number: 6 (lower is better)
Translates to: SMLRMSLRHSSR*VVISRAFSRNL
Trigger: GAGGTTCCTAGAGAAAGCTCGAGAGATGACAACCCACCTGGAACTGTGGCGCAAAGACATCCGCAGCATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp ACTGAAAGAGTCTGTCGGCTTCAGCAGGGTGCCACTTaGCTTGTCCCGAGAGAGGATGTTTGTTCTCCTACG +
Preference number: 6 (lower is better)
Translates to: TERVCRLQQGAT*LVPREDVCSPT
Trigger: CGTAGGAGAACAAACATCCTCTCTCGGGACAAGCAAAGTGGCACCCTGCTGAAGCCGACAGACTCTTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 90 bp TTCCTTCAATGCTGCGGATGTCTTTGCGCCACAGTTCCAGGTGGGTaGTCATCTCTCGAGCTTTCTCTAGGAACCTCTTCCAGGACTTGC +
Preference number: 6 (lower is better)
Translates to: FLQCCGCLCATVPGG*SSLELSLGTSSRTC
Trigger: GCAAGTCCTGGAAGAGGTTCCTAGAGAAAGCTCGAGAGATGACAACCCACCTGGAACTGTGGCGCAAAGACATCCGCAGCATTGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 72 bp TCTCTCGAGCTTTCTCTAGGAACCTCTTCCAGGACTTaGTGCTGTACCGTTTCCACTGGTCCCACTCTGATA +
Preference number: 6 (lower is better)
Translates to: SLELSLGTSSRT*CCTVSTGPTLI
Trigger: TATCAGAGTGGGACCAGTGGAAACGGTACAGCAGCAAGTCCTGGAAGAGGTTCCTAGAGAAAGCTCGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 72 bp CAGCTGCTCTCGAAGCTGTACAACCACCTGCTTGTGTaGTCCAGCCAGTGCAATGAAGTAGAACATGACAAG +
Preference number: 6 (lower is better)
Translates to: QLLSKLYNHLLV*SSQCNEVEHDK
Trigger: CTTGTCATGTTCTACTTCATTGCACTGGCTGGAGCACACAAGCAGGTGGTTGTACAGCTTCGAGAGCAGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp GGATGTTTGTTCTCCTACGTGCCACTGACCGATAGCTaGGCAGCTCTTGAAGGAAGTTCACAGGTGGAGAGA +
Preference number: 6 (lower is better)
Translates to: GCLFSYVPLTDS*AALEGSSQVER
Trigger: TCTCTCCACCTGTGAACTTCCTTCAAGAGCTGCCAAGCTATCGGTCAGTGGCACGTAGGAGAACAAACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp ATCTCTCGAGCTTTCTCTAGGAACCTCTTCCAGGACTaGCTGCTGTACCGTTTCCACTGGTCCCACTCTGAT +
Preference number: 6 (lower is better)
Translates to: ISRAFSRNLFQD*LLYRFHWSHSD
Trigger: ATCAGAGTGGGACCAGTGGAAACGGTACAGCAGCAAGTCCTGGAAGAGGTTCCTAGAGAAAGCTCGAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 72 bp CTCGAGCTTTCTCTAGGAACCTCTTCCAGGACTTGCTaGTGTACCGTTTCCACTGGTCCCACTCTGATAAAT +
Preference number: 6 (lower is better)
Translates to: LELSLGTSSRTC*CTVSTGPTLIN
Trigger: ATTTATCAGAGTGGGACCAGTGGAAACGGTACAGCAGCAAGTCCTGGAAGAGGTTCCTAGAGAAAGCTCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 72 bp GACACACCTAAGAATCGTCAGGCGGATCTCAAAGCCTaGCGAGTAATCCTCGTAGTGGATGATCTTGGCAAA +
Preference number: 6 (lower is better)
Translates to: DTPKNRQADLKA*RVILVVDDLGK
Trigger: TTTGCCAAGATCATCCACTACGAGGATTACTCGCCAGGCTTTGAGATCCGCCTGACGATTCTTAGGTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 90 bp CGCTTCTCAGAGATGTTCAGTGCATACTTGCGGATGGATTGGCTGTaGAGGTTTTCTGTGATTCCTCCATCCAGCTGGCAACTGAAAGAG +
Preference number: 6 (lower is better)
Translates to: RFSEMFSAYLRMDWL*RFSVIPPSSWQLKE
Trigger: CTCTTTCAGTTGCCAGCTGGATGGAGGAATCACAGAAAACCTCAACAGCCAATCCATCCGCAAGTATGCACTGAACATCTCTGAGAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 90 bp TGGGTTGTCATCTCTCGAGCTTTCTCTAGGAACCTCTTCCAGGACTaGCTGCTGTACCGTTTCCACTGGTCCCACTCTGATAAATACTTC +
Preference number: 6 (lower is better)
Translates to: WVVISRAFSRNLFQD*LLYRFHWSHSDKYF
Trigger: GAAGTATTTATCAGAGTGGGACCAGTGGAAACGGTACAGCAGCAAGTCCTGGAAGAGGTTCCTAGAGAAAGCTCGAGAGATGACAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp GAGATGTTCAGTGCATACTTGCGGATGGATTGGCTGTaGAGGTTTTCTGTGATTCCTCCATCCAGCTGGCAA +
Preference number: 6 (lower is better)
Translates to: EMFSAYLRMDWL*RFSVIPPSSWQ
Trigger: TTGCCAGCTGGATGGAGGAATCACAGAAAACCTCAACAGCCAATCCATCCGCAAGTATGCACTGAACATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS TCA 72 bp TCGTGCTTATCAAGTAAGCCAGGGGCAGGTCATACGTaGAGCTCTGGAACTTTACACCATCAATGGTGTAGT +
Preference number: 6 (lower is better)
Translates to: SCLSSKPGAGHT*SSGTLHHQWCS
Trigger: ACTACACCATTGATGGTGTAAAGTTCCAGAGCTTCACGTATGACCTGCCCCTGGCTTACTTGATAAGCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 72 bp TTCTCAGAGATGTTCAGTGCATACTTGCGGATGGATTaGCTGTTGAGGTTTTCTGTGATTCCTCCATCCAGC +
Preference number: 6 (lower is better)
Translates to: FSEMFSAYLRMD*LLRFSVIPPSS
Trigger: GCTGGATGGAGGAATCACAGAAAACCTCAACAGCCAATCCATCCGCAAGTATGCACTGAACATCTCTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp CTTCTCAGAGATGTTCAGTGCATACTTGCGGATGGATaGGCTGTTGAGGTTTTCTGTGATTCCTCCATCCAG +
Preference number: 6 (lower is better)
Translates to: LLRDVQCILADG*AVEVFCDSSIQ
Trigger: CTGGATGGAGGAATCACAGAAAACCTCAACAGCCAATCCATCCGCAAGTATGCACTGAACATCTCTGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp TCATGTGTTCCTGTGAGAAGGCAGTTGCTAGGTAGATaGCATAAAAGCATGCCGCTAGCACAGCAAGCACAA +
Preference number: 6 (lower is better)
Translates to: SCVPVRRQLLGR*HKSMPLAQQAQ
Trigger: TTGTGCTTGCTGTGCTAGCGGCATGCTTTTATGCAATCTACCTAGCAACTGCCTTCTCACAGGAACACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp CTTAGTCTCCGCTTCTCAGAGATGTTCAGTGCATACTaGCGGATGGATTGGCTGTTGAGGTTTTCTGTGATT +
Preference number: 6 (lower is better)
Translates to: LSLRFSEMFSAY*RMDWLLRFSVI
Trigger: AATCACAGAAAACCTCAACAGCCAATCCATCCGCAAGTATGCACTGAACATCTCTGAGAAGCGGAGACTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS GCA 72 bp TTGCATAAAAGCATGCCGCTAGCACAGCAAGCACAATaGAGTTCAAAAACAGCCTCAAAGTGTAAATGCGGA +
Preference number: 6 (lower is better)
Translates to: LHKSMPLAQQAQ*SSKTASKCKCG
Trigger: TCCGCATTTACACTTTGAGGCTGTTTTTGAACTGCATTGTGCTTGCTGTGCTAGCGGCATGCTTTTATGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp TCCATGTCTTTGAACGGGATGAGCACAAAAGTGCTGTaGGTAATCTTGTACTTGGTGAGTAGGATTGGAAGC +
Preference number: 6 (lower is better)
Translates to: SMSLNGMSTKVL*VILYLVSRIGS
Trigger: GCTTCCAATCCTACTCACCAAGTACAAGATTACCAACAGCACTTTTGTGCTCATCCCGTTCAAAGACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp TGGATGATCTTGGCAAAGATGATTGGGGTAATGAAATaGGCCAGGGTAATCACAATGGACGGGAGGTACAAT +
Preference number: 6 (lower is better)
Translates to: WMILAKMIGVMK*ARVITMDGRYN
Trigger: ATTGTACCTCCCGTCCATTGTGATTACCCTGGCCAATTTCATTACCCCAATCATCTTTGCCAAGATCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS TCA 72 bp ATGAGCCCAGAGCTACTTATTGGATACAGTGTGCACTaGATATCCATGTCTTTGAACGGGATGAGCACAAAA +
Preference number: 6 (lower is better)
Translates to: MSPELLIGYSVH*ISMSLNGMSTK
Trigger: TTTTGTGCTCATCCCGTTCAAAGACATGGATATTCAGTGCACACTGTATCCAATAAGTAGCTCTGGGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CCA 72 bp GTAATCCTCGTAGTGGATGATCTTGGCAAAGATGATTaGGGTAATGAAATTGGCCAGGGTAATCACAATGGA +
Preference number: 6 (lower is better)
Translates to: VILVVDDLGKDD*GNEIGQGNHNG
Trigger: TCCATTGTGATTACCCTGGCCAATTTCATTACCCCAATCATCTTTGCCAAGATCATCCACTACGAGGATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp GGGATGAGCACAAAAGTGCTGTTGGTAATCTTGTACTaGGTGAGTAGGATTGGAAGCAAAACCAACATGAAG +
Preference number: 6 (lower is better)
Translates to: GMSTKVLLVILY*VSRIGSKTNMK
Trigger: CTTCATGTTGGTTTTGCTTCCAATCCTACTCACCAAGTACAAGATTACCAACAGCACTTTTGTGCTCATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 72 bp TTGAACGGGATGAGCACAAAAGTGCTGTTGGTAATCTaGTACTTGGTGAGTAGGATTGGAAGCAAAACCAAC +
Preference number: 6 (lower is better)
Translates to: LNGMSTKVLLVI*YLVSRIGSKTN
Trigger: GTTGGTTTTGCTTCCAATCCTACTCACCAAGTACAAGATTACCAACAGCACTTTTGTGCTCATCCCGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6
CDS CAA 90 bp TCCATGTCTTTGAACGGGATGAGCACAAAAGTGCTGTTGGTAATCTaGTACTTGGTGAGTAGGATTGGAAGCAAAACCAACATGAAGATG +
Preference number: 6 (lower is better)
Translates to: SMSLNGMSTKVLLVI*YLVSRIGSKTNMKM
Trigger: CATCTTCATGTTGGTTTTGCTTCCAATCCTACTCACCAAGTACAAGATTACCAACAGCACTTTTGTGCTCATCCCGTTCAAAGACATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044195.6