Pregenerated sensors for TMC6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025572Ensembl transcript IDs: ENSMUST00000026659.10, ENSMUST00000131606.8, ENSMUST00000136729.8, ENSMUST00000143406.8, ENSMUST00000149589.2, ENSMUST00000152304.3
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTAGGCCAGCGGCATGTTATAGGGCAGGCTGCCCAGCCTGGGACTaGACTGGCCACCTTCCCGAGGGGCGTCACATGACGGGCTCAGCG | + |
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Preference number: 1 (lower is better) Translates to: GRPAACYRAGCPAWD*TGHLPEGRHMTGSA Trigger: CGCTGAGCCCGTCATGTGACGCCCCTCGGGAAGGTGGCCAGTGCAGTCCCAGGCTGGGCAGCCTGCCCTATAACATGCCGCTGGCCTACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR TCA 90 bp | GTGAGGAGCCCTCACGGCTGCAGCTGGGGACCTGCAGACATGGCCTaGCGGAACAAGCCCCAGCTTGCTGCTCCTTCCCTCCTCCTCGTA | + |
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Preference number: 1 (lower is better) Translates to: VRSPHGCSWGPADMA*RNKPQLAAPSLLLV Trigger: TACGAGGAGGAGGGAAGGAGCAGCAAGCTGGGGCTTGTTCCGTCAGGCCATGTCTGCAGGTCCCCAGCTGCAGCCGTGAGGGCTCCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR GCA 90 bp | AGACACAGCAGCCACCCCAGACCTAGAACGACGACCTGCCTCAGCTaGCCGCACACACTCCGAGGGCGCTTTCGAAGGTGCCATTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: RHSSHPRPRTTTCLS*PHTLRGRFRRCHSA Trigger: GGCTGAATGGCACCTTCGAAAGCGCCCTCGGAGTGTGTGCGGGCAGCTGAGGCAGGTCGTCGTTCTAGGTCTGGGGTGGCTGCTGTGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR TCA 90 bp | GGCAAGGCCAACGCCTCCACCCCCTGGCCACCAGAAGCAGGTCTCTaGATCATTACCTCTGAGAAGGTGAGGACAGCCACCGTGCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: GKANASTPWPPEAGL*IITSEKVRTATVQP Trigger: GGGCTGCACGGTGGCTGTCCTCACCTTCTCAGAGGTAATGATTCAGAGACCTGCTTCTGGTGGCCAGGGGGTGGAGGCGTTGGCCTTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR TCA 90 bp | GCCCAGCCTGGGACTGCACTGGCCACCTTCCCGAGGGGCGTCACATaGCGGGCTCAGCGTGCTGTTACTGTAGTAGCCGTAGTACATAAC | + |
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Preference number: 1 (lower is better) Translates to: AQPGTALATFPRGVT*RAQRAVTVVAVVHN Trigger: GTTATGTACTACGGCTACTACAGTAACAGCACGCTGAGCCCGTCATGTGACGCCCCTCGGGAAGGTGGCCAGTGCAGTCCCAGGCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR GCA 90 bp | GGTGACCGGGGGTTACAGGGTTCCTTCTGGTCCCCTCCATCCTCATaGCAGGCAGGTGGTTCAGTAGTGTCCTGGGTTCTGCCAGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: GDRGLQGSFWSPPSS*QAGGSVVSWVLPGL Trigger: AAGGCCTGGCAGAACCCAGGACACTACTGAACCACCTGCCTGGCATGAGGATGGAGGGGACCAGAAGGAACCCTGTAACCCCCGGTCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR CCA 90 bp | CTGCATGCTCCAGGCGACGCACCCAGACCGTGCCTGCTTCATACATaGTGTTCAGAGTCCGGAAAGGGCCACAAGTGCTCGAGGGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: LHAPGDAPRPCLLHT*CSESGKGHKCSRAS Trigger: TGAGGCCCTCGAGCACTTGTGGCCCTTTCCGGACTCTGAACACCATGTATGAAGCAGGCACGGTCTGGGTGCGTCGCCTGGAGCATGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR GCA 90 bp | AGTCTCTCCCAAGAGTCATGGGAACCAACAGATGTCTCCAGCAGATaGCCCAGGCAGGAATGTTGGGGAGGGGCAGCCCAGTGCCACAAG | + |
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Preference number: 1 (lower is better) Translates to: SLSQESWEPTDVSSR*PRQECWGGAAQCHK Trigger: CTTGTGGCACTGGGCTGCCCCTCCCCAACATTCCTGCCTGGGGCATCTGCTGGAGACATCTGTTGGTTCCCATGACTCTTGGGAGAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149589.2 |
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| 3UTR GCA 90 bp | GTCACTCTACTGCCACATCCTGTGGGGATCTCAGGTCCAAGTCTCTaGTTGCAGGATCATGGTGACCGGGGGTTACAGGGTTCCTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: VTLLPHPVGISGPSL*LQDHGDRGLQGSFW Trigger: CCAGAAGGAACCCTGTAACCCCCGGTCACCATGATCCTGCAAGCAGAGACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR GCA 90 bp | GAAGCAGGTGGATCTCTGACTTCAAGGTCAGCCAGGTCAACAGAGTaGCAGGACACCCCAGGGCTATGTAGATACACCCTACCAGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: EAGGSLTSRSARSTE*QDTPGLCRYTLPGE Trigger: TTCCCCTGGTAGGGTGTATCTACATAGCCCTGGGGTGTCCTGGCACTCTGTTGACCTGGCTGACCTTGAAGTCAGAGATCCACCTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
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| 3UTR GCA 90 bp | TTCGAAGGTGCCATTCAGCCAACAGCTCCTTCAGCTGAGTGCAGATaGTGTCCTGTTGGACACGGGAAGCCCTCTTCTGTGTCACCTTGT | + |
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Preference number: 1 (lower is better) Translates to: FEGAIQPTAPSAECR*CPVGHGKPSSVSPC Trigger: ACAAGGTGACACAGAAGAGGGCTTCCCGTGTCCAACAGGACAGCATCTGCACTCAGCTGAAGGAGCTGTTGGCTGAATGGCACCTTCGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR CCA 90 bp | ATGCCAACTAGAGTTCATGGGAAGTCACTCTACTGCCACATCCTGTaGGGATCTCAGGTCCAAGTCTCTGCTTGCAGGATCATGGTGACC | + |
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Preference number: 1 (lower is better) Translates to: MPTRVHGKSLYCHIL*GSQVQVSACRIMVT Trigger: GGTCACCATGATCCTGCAAGCAGAGACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCCATGAACTCTAGTTGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR-3UTR GCA 90 bp | CACATGCACTGGCTGACCAGCACCACTCTGGATCTCAGCTGCCCACAAGGCAGCGGAGGGGCAGCCCAGTaGCACAAGCCCACTCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: HMHWLTSTTLDLSCPQGSGGAAQ*HKPTLL Trigger: TAGCAGAGTGGGCTTGTGGCACTGGGCTGCCCCTCC...GCTGCCTTGTGGGCAGCTGAGATCCAGAGTGGTGCTGGTCAGCCAGTGCATGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149589.2 |
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| 3UTR-3UTR CCA 90 bp | GGATACCCTTGGTACTGCCAACCCGGTAGCTCTCCCCAAAGGAGTGGGACATGCAGGCACGGGGCCTGCTaGGTCAGGTGGAAAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GYPWYCQPGSSPQRSGTCRHGAC*VRWKGS Trigger: GCTGCCTTTCCACCTGACCCAGCAGGCCCCGTGCCT...GCATGTCCCACTCCTTTGGGGAGAGCTACCGGGTTGGCAGTACCAAGGGTATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTGGTCCCCTCCATCCTCATGCCAGGCAGGTGGTTCAGTAGTGTCCTGGGTTGGTGGAAAGGCAGCCTaGACACCCACGAGGAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: FWSPPSSCQAGGSVVSWVGGKAA*TPTRKA Trigger: GGCCTTCCTCGTGGGTGTTCAGGCTGCCTTTCCACC...AACCCAGGACACTACTGAACCACCTGCCTGGCATGAGGATGGAGGGGACCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGAATGTTGGGGAGGGGCAGCCCAGTGCCACAAGCCCACTCTGCTACCAAAGATCAGGCTGGCCTTaGACTCAGCAAATCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GRNVGEGQPSATSPLCYQRSGWP*TQQIPA Trigger: GGCAGGGATTTGCTGAGTTCAAGGCCAGCCTGATCT...TTGGTAGCAGAGTGGGCTTGTGGCACTGGGCTGCCCCTCCCCAACATTCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149589.2 |
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| 3UTR-3UTR GCA 90 bp | GCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATCTCTGACTTCCGTAGGCACGGGGCCTaGTGGGTCAGGTGGAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: AHLWFQHLEGRSRWISDFRRHGA*WVRWKG Trigger: GCCTTTCCACCTGACCCAGCAGGCCCCGTGCCTACG...GAAGTCAGAGATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR CAA 90 bp | AGGTGGTTCAGTAGTGTCCTGGGTTCTGCCAGGCCTTGGGTTCCCTaGCAAGGTAGCCCAAGGCCCAGGATGACCGGATGTTATGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: RWFSSVLGSARPWVP*QGSPRPRMTGCYAF Trigger: GAAGGCATAACATCCGGTCATCCTGGGCCTTGGGCTACCTTGCAAGGGAACCCAAGGCCTGGCAGAACCCAGGACACTACTGAACCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTACTGCAGGCAGGAGCGGTGAGAACAGGACGCCCAGCCAGGTCAGTGTCTGCTCCTTCAGCTGAGTaGAGATGCTGTCCTGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: SVLQAGAVRTGRPARSVSAPSAE*RCCPVG Trigger: TCCAACAGGACAGCATCTGCACTCAGCTGAAGGAGC...AGACACTGACCTGGCTGGGCGTCCTGTTCTCACCGCTCCTGCCTGCAGTACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGACTTCAAGGTCAGCCAGGTCAACAGAGTGCCAGGACACCCCAGGGCTATGAGTAGGAGAGGACGCTaGAGCCAAACTGGCCACCGA | + |
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Preference number: 2 (lower is better) Translates to: SDFKVSQVNRVPGHPRAMSRRGR*SQTGHR Trigger: TCGGTGGCCAGTTTGGCTCCAGCGTCCTCTCCTACT...CATAGCCCTGGGGTGTCCTGGCACTCTGTTGACCTGGCTGACCTTGAAGTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR CAA 90 bp | ACTCTACTGCCACATCCTGTGGGGATCTCAGGTCCAAGTCTCTGCTaGCAGGATCATGGTGACCGGGGGTTACAGGGTTCCTTCTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: TLLPHPVGISGPSLC*QDHGDRGLQGSFWS Trigger: GGACCAGAAGGAACCCTGTAACCCCCGGTCACCATGATCCTGCAAGCAGAGACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR-3UTR CCA 90 bp | AATAGGGGGTGCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATGCCTGCTGGGTCAGGTaGAAAGGCAGCCTGAACACC | + |
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Preference number: 2 (lower is better) Translates to: NRGCTPLVSALGREKQVDACWVR*KGSLNT Trigger: GGTGTTCAGGCTGCCTTTCCACCTGACCCAGCAGGC...ATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR-3UTR CCA 90 bp | AATAGGGGGTGCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATGTGGTGCCTGGCAGTTaGCCATCAGGCTGGCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: NRGCTPLVSALGREKQVDVVPGS*PSGWPS Trigger: AGAAGGCCAGCCTGATGGCCAACTGCCAGGCACCAC...ATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR CAA 90 bp | CCATTCAGCCAACAGCTCCTTCAGCTGAGTGCAGATGCTGTCCTGTaGGACACGGGAAGCCCTCTTCTGTGTCACCTTGTAGTCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PFSQQLLQLSADAVL*DTGSPLLCHLVVPG Trigger: TCCTGGGACTACAAGGTGACACAGAAGAGGGCTTCCCGTGTCCAACAGGACAGCATCTGCACTCAGCTGAAGGAGCTGTTGGCTGAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTGGTCCCCTCCATCCTCATGCCAGGCAGGTGGTTCAGTAGTGTCCTGGGTTGGGAAGTCACTCTACTaGCACATCCTGTGGGGATCT | + |
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Preference number: 2 (lower is better) Translates to: FWSPPSSCQAGGSVVSWVGKSLY*HILWGS Trigger: AGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCC...AACCCAGGACACTACTGAACCACCTGCCTGGCATGAGGATGGAGGGGACCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGGGGGTGCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATCTCAGCTGAGTGCAGATaGTGTCCTGTTGGACACGGG | + |
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Preference number: 2 (lower is better) Translates to: IGGAHLWFQHLEGRSRWISAECR*CPVGHG Trigger: CCCGTGTCCAACAGGACAGCATCTGCACTCAGCTGA...GATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR-3UTR GCA 90 bp | GCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATCTCTGACTTCGGGAAGTCACTCTACTaGCACATCCTGTGGGGATCT | + |
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Preference number: 2 (lower is better) Translates to: AHLWFQHLEGRSRWISDFGKSLY*HILWGS Trigger: AGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCC...GAAGTCAGAGATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCTTGATGTGGAAAAGGAAGAGCAGCCGGAGAATCTGTACTGCAGGCAGGAGGATGTCTCCAGCAGATaGCCCAGGCAGGAATGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LLDVEKEEQPENLYCRQEDVSSR*PRQECW Trigger: CCAACATTCCTGCCTGGGGCATCTGCTGGAGACATC...CTCCTGCCTGCAGTACAGATTCTCCGGCTGCTCTTCCTTTTCCACATCAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149589.2 |
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| 3UTR-3UTR TCA 90 bp | ATGACCGGATGTTATGCCTTCAGTTCAGGACATCAGTCTCGATGTGAGGAGCCCCTGAATCATTACCTCTaGGAAGGTGAGGACAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: MTGCYAFSSGHQSRCEEPLNHYL*EGEDSH Trigger: GTGGCTGTCCTCACCTTCTCAGAGGTAATGATTCAG...GGGCTCCTCACATCGAGACTGATGTCCTGAACTGAAGGCATAACATCCGGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR-3UTR GCA 90 bp | AATAGGGGGTGCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATCACATCCCACATTCTTaGTCTATGCCAACTAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: NRGCTPLVSALGREKQVDHIPHS*SMPTRV Trigger: AACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTG...ATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
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| 3UTR-3UTR GCA 90 bp | CATTTAATAGGGGGTGCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGCACATCCCACATTCTTaGTCTATGCCAACTAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: HLIGGAHLWFQHLEGRSRHIPHS*SMPTRV Trigger: AACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTG...CCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTATTAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
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| 3UTR GCA 72 bp | GCGGCATGTTATAGGGCAGGCTGCCCAGCCTGGGACTaGACTGGCCACCTTCCCGAGGGGCGTCACATGACG | + |
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Preference number: 3 (lower is better) Translates to: AACYRAGCPAWD*TGHLPEGRHMT Trigger: CGTCATGTGACGCCCCTCGGGAAGGTGGCCAGTGCAGTCCCAGGCTGGGCAGCCTGCCCTATAACATGCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR GCA 72 bp | CGATGTGAGGAGCCCTCACGGCTGCAGCTGGGGACCTaGAGACATGGCCTGACGGAACAAGCCCCAGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: RCEEPSRLQLGT*RHGLTEQAPAC Trigger: GCAAGCTGGGGCTTGTTCCGTCAGGCCATGTCTGCAGGTCCCCAGCTGCAGCCGTGAGGGCTCCTCACATCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR CCA 72 bp | GGAGCCCTCACGGCTGCAGCTGGGGACCTGCAGACATaGCCTGACGGAACAAGCCCCAGCTTGCTGCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: GALTAAAGDLQT*PDGTSPSLLLL Trigger: AAGGAGCAGCAAGCTGGGGCTTGTTCCGTCAGGCCATGTCTGCAGGTCCCCAGCTGCAGCCGTGAGGGCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR GCA 72 bp | AGACACAGCAGCCACCCCAGACCTAGAACGACGACCTaGCTCAGCTGCCCGCACACACTCCGAGGGCGCTTT | + |
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Preference number: 3 (lower is better) Translates to: RHSSHPRPRTTT*LSCPHTLRGRF Trigger: AAAGCGCCCTCGGAGTGTGTGCGGGCAGCTGAGGCAGGTCGTCGTTCTAGGTCTGGGGTGGCTGCTGTGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR TCA 72 bp | GGGACTGCACTGGCCACCTTCCCGAGGGGCGTCACATaGCGGGCTCAGCGTGCTGTTACTGTAGTAGCCGTA | + |
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Preference number: 3 (lower is better) Translates to: GTALATFPRGVT*RAQRAVTVVAV Trigger: TACGGCTACTACAGTAACAGCACGCTGAGCCCGTCATGTGACGCCCCTCGGGAAGGTGGCCAGTGCAGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR TCA 72 bp | GAGCAGCCGGAGAATCTGTACTGCAGGCAGGAGCGGTaGGAACAGGACGCCCAGCCAGGTCAGTGTCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: EQPENLYCRQER*EQDAQPGQCLS Trigger: GGACAGACACTGACCTGGCTGGGCGTCCTGTTCTCACCGCTCCTGCCTGCAGTACAGATTCTCCGGCTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131606.8 ENSMUST00000149589.2 |
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| 3UTR TCA 72 bp | CTGCCCACAAGGCAGCAGCCCAGTAAGACTACCACGTaGAGGGGGCAGCTGAGGAGGAACAGAATGGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: LPTRQQPSKTTT*RGQLRRNRMGP Trigger: GGGCCCCATTCTGTTCCTCCTCAGCTGCCCCCTTCACGTGGTAGTCTTACTGGGCTGCTGCCTTGTGGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149589.2 |
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| 3UTR CCA 72 bp | ACCAGAAAACGTAGGCACGGGGCCTGCTGGGTCAGGTaGAAAGGCAGCCTGAACACCCACGAGGAAGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: TRKRRHGACWVR*KGSLNTHEEGQ Trigger: CTGGCCTTCCTCGTGGGTGTTCAGGCTGCCTTTCCACCTGACCCAGCAGGCCCCGTGCCTACGTTTTCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR CCA 72 bp | ACAGATGTCTCCAGCAGATGCCCCAGGCAGGAATGTTaGGGAGGGGCAGCCCAGTGCCACAAGCCCACTCTG | + |
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Preference number: 3 (lower is better) Translates to: TDVSSRCPRQEC*GGAAQCHKPTL Trigger: CAGAGTGGGCTTGTGGCACTGGGCTGCCCCTCCCCAACATTCCTGCCTGGGGCATCTGCTGGAGACATCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149589.2 |
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| 3UTR CCA 72 bp | GAGTTCCAGACCAGAAAACGTAGGCACGGGGCCTGCTaGGTCAGGTGGAAAGGCAGCCTGAACACCCACGAG | + |
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Preference number: 3 (lower is better) Translates to: EFQTRKRRHGAC*VRWKGSLNTHE Trigger: CTCGTGGGTGTTCAGGCTGCCTTTCCACCTGACCCAGCAGGCCCCGTGCCTACGTTTTCTGGTCTGGAACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR GCA 72 bp | CAAGAGTCATGGGAACCAACAGATGTCTCCAGCAGATaGCCCAGGCAGGAATGTTGGGGAGGGGCAGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: QESWEPTDVSSR*PRQECWGGAAQ Trigger: CTGGGCTGCCCCTCCCCAACATTCCTGCCTGGGGCATCTGCTGGAGACATCTGTTGGTTCCCATGACTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149589.2 |
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| 3UTR TCA 72 bp | AACGCCTCCACCCCCTGGCCACCAGAAGCAGGTCTCTaGATCATTACCTCTGAGAAGGTGAGGACAGCCACC | + |
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Preference number: 3 (lower is better) Translates to: NASTPWPPEAGL*IITSEKVRTAT Trigger: GGTGGCTGTCCTCACCTTCTCAGAGGTAATGATTCAGAGACCTGCTTCTGGTGGCCAGGGGGTGGAGGCGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR GCA 72 bp | GGGTTACAGGGTTCCTTCTGGTCCCCTCCATCCTCATaGCAGGCAGGTGGTTCAGTAGTGTCCTGGGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: GLQGSFWSPPSS*QAGGSVVSWVL Trigger: CAGAACCCAGGACACTACTGAACCACCTGCCTGGCATGAGGATGGAGGGGACCAGAAGGAACCCTGTAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR GCA 72 bp | CTGCCACATCCTGTGGGGATCTCAGGTCCAAGTCTCTaGTTGCAGGATCATGGTGACCGGGGGTTACAGGGT | + |
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Preference number: 3 (lower is better) Translates to: LPHPVGISGPSL*LQDHGDRGLQG Trigger: ACCCTGTAACCCCCGGTCACCATGATCCTGCAAGCAGAGACTTGGACCTGAGATCCCCACAGGATGTGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR GCA 72 bp | ATGCACTGGCTGACCAGCACCACTCTGGATCTCAGCTaGCCACAAGGCAGCAGCCCAGTAAGACTACCACGT | + |
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Preference number: 3 (lower is better) Translates to: MHWLTSTTLDLS*PQGSSPVRLPR Trigger: ACGTGGTAGTCTTACTGGGCTGCTGCCTTGTGGGCAGCTGAGATCCAGAGTGGTGCTGGTCAGCCAGTGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149589.2 |
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| 3UTR CCA 72 bp | CCATCCTCATGCCAGGCAGGTGGTTCAGTAGTGTCCTaGGTTCTGCCAGGCCTTGGGTTCCCTTGCAAGGTA | + |
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Preference number: 3 (lower is better) Translates to: PSSCQAGGSVVS*VLPGLGFPCKV Trigger: TACCTTGCAAGGGAACCCAAGGCCTGGCAGAACCCAGGACACTACTGAACCACCTGCCTGGCATGAGGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| 3UTR TCA 72 bp | ATGTTATGCCTTCAGTTCAGGACATCAGTCTCGATGTaGGGAGCCCTCACGGCTGCAGCTGGGGACCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: MLCLQFRTSVSM*GALTAAAGDLQ Trigger: CTGCAGGTCCCCAGCTGCAGCCGTGAGGGCTCCTCACATCGAGACTGATGTCCTGAACTGAAGGCATAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
||
| 3UTR GCA 72 bp | GCCATTCAGCCAACAGCTCCTTCAGCTGAGTGCAGATaGTGTCCTGTTGGACACGGGAAGCCCTCTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: AIQPTAPSAECR*CPVGHGKPSSV Trigger: CACAGAAGAGGGCTTCCCGTGTCCAACAGGACAGCATCTGCACTCAGCTGAAGGAGCTGTTGGCTGAATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
||
| 3UTR GCA 72 bp | GAAGGTGCCATTCAGCCAACAGCTCCTTCAGCTGAGTaGAGATGCTGTCCTGTTGGACACGGGAAGCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EGAIQPTAPSAE*RCCPVGHGKPS Trigger: AGAGGGCTTCCCGTGTCCAACAGGACAGCATCTGCACTCAGCTGAAGGAGCTGTTGGCTGAATGGCACCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
||
| 3UTR GCA 72 bp | ACCTGCAGACATGGCCTGACGGAACAAGCCCCAGCTTaGTGCTCCTTCCCTCCTCCTCGTAAACAGAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: TCRHGLTEQAPA*CSFPPPRKQSE Trigger: TTCACTCTGTTTACGAGGAGGAGGGAAGGAGCAGCAAGCTGGGGCTTGTTCCGTCAGGCCATGTCTGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
||
| 3UTR CCA 72 bp | GAACAGAATGGGGCCCAGAGTCTCTCCCAAGAGTCATaGGAACCAACAGATGTCTCCAGCAGATGCCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: EQNGAQSLSQES*EPTDVSSRCPR Trigger: CCTGGGGCATCTGCTGGAGACATCTGTTGGTTCCCATGACTCTTGGGAGAGACTCTGGGCCCCATTCTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149589.2 |
||
| 3UTR TCA 72 bp | CTGGCCACCAGAAGCAGGTCTCTGAATCATTACCTCTaGGAAGGTGAGGACAGCCACCGTGCAGCCCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: LATRSRSLNHYL*EGEDSHRAAHC Trigger: ACAATGGGCTGCACGGTGGCTGTCCTCACCTTCTCAGAGGTAATGATTCAGAGACCTGCTTCTGGTGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
||
| 3UTR CCA 72 bp | CGGCCATCACACCCAGCCCGGGTTACCTTCTTGATGTaGAAAAGGAAGAGCAGCCGGAGAATCTGTACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RPSHPARVTFLM*KRKSSRRICTA Trigger: TGCAGTACAGATTCTCCGGCTGCTCTTCCTTTTCCACATCAAGAAGGTAACCCGGGCTGGGTGTGATGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149589.2 |
||
| 3UTR TCA 72 bp | GTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATCTCTaGCTTCAAGGTCAGCCAGGTCAACAGAGTGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSALGREKQVDL*LQGQPGQQSAR Trigger: CCTGGCACTCTGTTGACCTGGCTGACCTTGAAGTCAGAGATCCACCTGCTTCTCCCTTCCAAGTGCTGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| 3UTR GCA 72 bp | GGATCTCTGACTTCAAGGTCAGCCAGGTCAACAGAGTaGCAGGACACCCCAGGGCTATGTAGATACACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: GSLTSRSARSTE*QDTPGLCRYTL Trigger: TAGGGTGTATCTACATAGCCCTGGGGTGTCCTGGCACTCTGTTGACCTGGCTGACCTTGAAGTCAGAGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTGATGTGGAAAAGGAAGAGCAGCCGGAGAATCTGTACTGCAGGCAGGAGCTCTGGTTTCAGCACTaGGAAGGGAGAAGCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLDVEKEEQPENLYCRQELWFQH*EGRSRW Trigger: CCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAG...CTCCTGCCTGCAGTACAGATTCTCCGGCTGCTCTTCCTTTTCCACATCAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
||
| 3UTR GCA 72 bp | AGGGGAAGGGGTCCCACATCCCACATTCTTGCTCTATaGCAACTAGAGTTCATGGGAAGTCACTCTACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RGRGPTSHILAL*QLEFMGSHSTA Trigger: GGCAGTAGAGTGACTTCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGGACCCCTTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| 3UTR CCA 72 bp | CACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTaGATCTCTGACTTCAAGGTCAGCCAGGTCAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: HLWFQHLEGRSR*ISDFKVSQVNR Trigger: TCTGTTGACCTGGCTGACCTTGAAGTCAGAGATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| 3UTR CCA 72 bp | TGTAGCAAAACCCATTTAATAGGGGGTGCACACCTCTaGTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: CSKTHLIGGAHL*FQHLEGRSRWI Trigger: GATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTATTAAATGGGTTTTGCTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGGCTGACCAGCACCACTCTGGATCTCAGCTGCCCACAAGGCAGCAGCCCGCAGGGTGGCCACCCTaGGGCCCAGCCAGTGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALADQHHSGSQLPTRQQPAGWPP*GPASDS Trigger: GCTATCACTGGCTGGGCCGCAGGGTGGCCACCCTGC...GGGCTGCTGCCTTGTGGGCAGCTGAGATCCAGAGTGGTGCTGGTCAGCCAGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149589.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTGAGGAGTTCCAGACCAGAAAACGTAGGCACGGGGCCTGCTGGGTCAGGTGGCAGCATACAGGCCTaGGAGCAGTGCCAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVRSSRPENVGTGPAGSGGSIQA*EQCQPQ Trigger: CTGGGGCTGGCACTGCTCTCAGGCCTGTATGCTGCC...ACCTGACCCAGCAGGCCCCGTGCCTACGTTTTCTGGTCTGGAACTCCTCACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
||
| CDS-3UTR TCA 90 bp | GCACTGGCTGACCAGCACCACTCTGGATCTCAGCTGCCCACAAGGCAGCAGCCCCGGCCATCTTCAGGATaGGGTTCCTGCAGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALADQHHSGSQLPTRQQPRPSSG*GSCRWP Trigger: TGGCCATCTGCAGGAACCTCATCCTGAAGATGGCCG...GGGCTGCTGCCTTGTGGGCAGCTGAGATCCAGAGTGGTGCTGGTCAGCCAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149589.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAATCTGTACTGCAGGCAGGAGCGGTGAGAACAGGACGCCCAGCCAGGTCATGGTACGGCTGGGCATaGTGGCCAGGATGCGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GESVLQAGAVRTGRPARSWYGWA*WPGCGE Trigger: CTCTCCGCATCCTGGCCAGCATGCCCAGCCGTACCA...TGACCTGGCTGGGCGTCCTGTTCTCACCGCTCCTGCCTGCAGTACAGATTCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCAACAGAGTGCCAGGACACCCCAGGGCTATGTAGATACACCCTACCAGGGCAGAGGGCACCACATTaGCCAGCAAGGGCCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSTECQDTPGLCRYTLPGQRAPH*PARAGC Trigger: GCAGCCGGCCCTTGCTGGGCAATGTGGTGCCCTCTG...CCCTGGTAGGGTGTATCTACATAGCCCTGGGGTGTCCTGGCACTCTGTTGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTGACTTCAAGGTCAGCCAGGTCAACAGAGTGCCAGGACACCCCAGGGCTACAGAGGGCACCACATTaGCCAGCAAGGGCCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLTSRSARSTECQDTPGLQRAPH*PARAGC Trigger: GCAGCCGGCCCTTGCTGGGCAATGTGGTGCCCTCTG...TAGCCCTGGGGTGTCCTGGCACTCTGTTGACCTGGCTGACCTTGAAGTCAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR GCA 90 bp | TCTGACTTCAAGGTCAGCCAGGTCAACAGAGTGCCAGGACACCCCAGGGCTATGTGGTACGGCTGGGCATaGTGGCCAGGATGCGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SDFKVSQVNRVPGHPRAMWYGWA*WPGCGE Trigger: CTCTCCGCATCCTGGCCAGCATGCCCAGCCGTACCA...CATAGCCCTGGGGTGTCCTGGCACTCTGTTGACCTGGCTGACCTTGAAGTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGGGGAAGGGGTCCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCAGGGCCGGCTGCTCCTaGGCCGAAGCCTCACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TRGRGPTSHILALCQLEFRAGCS*AEASLC Trigger: GCACAGTGAGGCTTCGGCGCAGGAGCAGCCGGCCCT...GAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGGACCCCTTCCCCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR CCA 90 bp | AGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGTCCAAGTCTCTGCTTGCAAGCCTGGGACTGCACTaGCCACCTTCCCGAGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SHSTATSCGDLRSKSLLASLGLH*PPSRGA Trigger: CGCCCCTCGGGAAGGTGGCCAGTGCAGTCCCAGGCT...TGCAAGCAGAGACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CCA 90 bp | GGAGAATCTGTACTGCAGGCAGGAGCGGTGAGAACAGGACGCCCAGCCAGGTCAAAGCGGTACAGCTCCTaGCCCACAAAGTCCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GESVLQAGAVRTGRPARSKRYSS*PTKSSQ Trigger: CTGGGAGGACTTTGTGGGCCAGGAGCTGTACCGCTT...TGACCTGGCTGGGCGTCCTGTTCTCACCGCTCCTGCCTGCAGTACAGATTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149589.2 |
||
| 3UTR CAA 72 bp | AGTAGTGTCCTGGGTTCTGCCAGGCCTTGGGTTCCCTaGCAAGGTAGCCCAAGGCCCAGGATGACCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SSVLGSARPWVP*QGSPRPRMTGC Trigger: ACATCCGGTCATCCTGGGCCTTGGGCTACCTTGCAAGGGAACCCAAGGCCTGGCAGAACCCAGGACACTACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGTCCAAGTCTCTGCGGGTTCTGCCAGGCCTaGTCCTTCCCTCCTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WEVTLLPHPVGISGPSLCGFCQA*SFPPPR Trigger: ACGAGGAGGAGGGAAGGAGCAGGCCTGGCAGAACCC...GCAGAGACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CCA 90 bp | GGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGTCCAAGTCTCTGCTTACGGCTGGGCATGCTaGCCAGGATGCGGAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKSLYCHILWGSQVQVSAYGWAC*PGCGEW Trigger: CCACTCTCCGCATCCTGGCCAGCATGCCCAGCCGTA...AGCAGAGACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCCAGGTCAACAGAGTGCCAGGACACCCCAGGGCTATGTAGATACACCCTAATGTTCCGCACCATGTaGTCCCTCTGGGCCGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SARSTECQDTPGLCRYTLMFRTM*SLWAAD Trigger: GTCGGCGGCCCAGAGGGACCACATGGTGCGGAACAT...TAGGGTGTATCTACATAGCCCTGGGGTGTCCTGGCACTCTGTTGACCTGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR CCA 90 bp | GCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATCTCTGACTTCGGTCGGCGTGGTGCCTaGCAGTTGGCCATCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AHLWFQHLEGRSRWISDFGRRGA*QLAIRL Trigger: CAGCCTGATGGCCAACTGCCAGGCACCACGCCGACC...GAAGTCAGAGATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR TCA 90 bp | CATTTAATAGGGGGTGCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGGGCAGCATACAGGCCTaGGAGCAGTGCCAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLIGGAHLWFQHLEGRSRGSIQA*EQCQPQ Trigger: CTGGGGCTGGCACTGCTCTCAGGCCTGTATGCTGCC...CCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTATTAAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR TCA 90 bp | GTTCATGGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGTCCAAGTCGGTGGAAAGGCAGCCTaGACACCCACGAGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VHGKSLYCHILWGSQVQVGGKAA*TPTRKA Trigger: GGCCTTCCTCGTGGGTGTTCAGGCTGCCTTTCCACC...GACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCCATGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR TCA 90 bp | AATAGGGGGTGCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATACCGGCCCCCGCCTGTaGGGAGTTCCAGACCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NRGCTPLVSALGREKQVDTGPRL*GVPDQK Trigger: TTTCTGGTCTGGAACTCCTCACAGGCGGGGGCCGGT...ATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR GCA 90 bp | CAACTAGAGTTCATGGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGCGTAGGCACGGGGCCTaGTGGGTCAGGTGGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLEFMGSHSTATSCGDLRRRHGA*WVRWKG Trigger: GCCTTTCCACCTGACCCAGCAGGCCCCGTGCCTACG...CCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCCATGAACTCTAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR GCA 90 bp | AGGGGTCCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGAAGTGCAGGGTGGCCACCCTaGGGCCCAGCCAGTGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGPTSHILALCQLEFMGSAGWPP*GPASDS Trigger: GCTATCACTGGCTGGGCCGCAGGGTGGCCACCCTGC...ACTTCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGGACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR GCA 90 bp | CAACTAGAGTTCATGGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGCCAGGGTCGGCGTGGTaGCTGGCAGTTGGCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLEFMGSHSTATSCGDLRPGSAW*LAVGHQ Trigger: CTGATGGCCAACTGCCAGGCACCACGCCGACCCTGG...CCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCCATGAACTCTAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CCA 90 bp | ACCAGGGGAAGGGGTCCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCTACGGCTGGGCATGCTaGCCAGGATGCGGAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRGRGPTSHILALCQLEFYGWAC*PGCGEW Trigger: CCACTCTCCGCATCCTGGCCAGCATGCCCAGCCGTA...GAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGGACCCCTTCCCCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTACTGCAGGCAGGAGCGGTGAGAACAGGACGCCCAGCCAGGTCAGTGTCTCCTCCTCCAAGATTGTaGAGTCCAGCTCCAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLQAGAVRTGRPARSVSPPPRL*SPAPGH Trigger: ATGACCTGGAGCTGGACTCCACAATCTTGGAGGAGG...AGACACTGACCTGGCTGGGCGTCCTGTTCTCACCGCTCCTGCCTGCAGTACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGTCCAAGTCTCTGCGCCTGCTGGGTCAGGTaGAAAGGCAGCCTGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: WEVTLLPHPVGISGPSLCACWVR*KGSLNT Trigger: GGTGTTCAGGCTGCCTTTCCACCTGACCCAGCAGGC...GCAGAGACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CCA 90 bp | CAACTAGAGTTCATGGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGGCAGGCTGCCCAGCCTaGGACTGCACTGGCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLEFMGSHSTATSCGDLRAGCPA*DCTGHL Trigger: AAGGTGGCCAGTGCAGTCCCAGGCTGGGCAGCCTGC...CCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCCATGAACTCTAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CCA 90 bp | ATAGGGGGTGCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATCGTGGTGCCTGGCAGTTaGCCATCAGGCTGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IGGAHLWFQHLEGRSRWIVVPGS*PSGWPS Trigger: AGAAGGCCAGCCTGATGGCCAACTGCCAGGCACCAC...GATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| 3UTR CAA 72 bp | CCACATCCTGTGGGGATCTCAGGTCCAAGTCTCTGCTaGCAGGATCATGGTGACCGGGGGTTACAGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PHPVGISGPSLC*QDHGDRGLQGS Trigger: GGAACCCTGTAACCCCCGGTCACCATGATCCTGCAAGCAGAGACTTGGACCTGAGATCCCCACAGGATGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGGTCCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGACACGGCTGCGACCAATaGTACGGCTGGGCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRGPTSHILALCQLEFMGHGCDQ*YGWACW Trigger: CCAGCATGCCCAGCCGTACCATTGGTCGCAGCCGTG...TCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGGACCCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR CCA 90 bp | TCTGACTTCAAGGTCAGCCAGGTCAACAGAGTGCCAGGACACCCCAGGGCTATGCAGATGCTGTCCTGTTaGACACGGGAAGCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDFKVSQVNRVPGHPRAMQMLSC*TREALF Trigger: GAAGAGGGCTTCCCGTGTCCAACAGGACAGCATCTG...CATAGCCCTGGGGTGTCCTGGCACTCTGTTGACCTGGCTGACCTTGAAGTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CCA 90 bp | AGTTCATGGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGTCCAAGTCCGTGCAGCCCATTGTaGAGCCCAGACACAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSWEVTLLPHPVGISGPSPCSPL*SPDTAA Trigger: GGCTGCTGTGTCTGGGCTCCACAATGGGCTGCACGG...ACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCCATGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR TCA 90 bp | TCTCTGACTTCAAGGTCAGCCAGGTCAACAGAGTGCCAGGACACCCCAGGGCTAGCTTCTTCTCTGAGATaGGCCTCCACACCAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLTSRSARSTECQDTPGLASSLR*ASTPTL Trigger: GAGAGTTGGTGTGGAGGCTCATCTCAGAGAAGAAGC...TAGCCCTGGGGTGTCCTGGCACTCTGTTGACCTGGCTGACCTTGAAGTCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGAAGTCACACGGCTGCGACCAATaGTACGGCTGGGCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSHIPHSCSMPTRVHGKSHGCDQ*YGWACW Trigger: CCAGCATGCCCAGCCGTACCATTGGTCGCAGCCGTG...TGACTTCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR CCA 90 bp | CCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGAAGTCACTCTAGGCACGGGGCCTGCTaGGTCAGGTGGAAAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTSHILALCQLEFMGSHSRHGAC*VRWKGS Trigger: GCTGCCTTTCCACCTGACCCAGCAGGCCCCGTGCCT...AGAGTGACTTCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR TCA 90 bp | CACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATCTCTGACTTCAAGCGGCCATCTTCAGGATaGGGTTCCTGCAGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLWFQHLEGRSRWISDFKRPSSG*GSCRWP Trigger: TGGCCATCTGCAGGAACCTCATCCTGAAGATGGCCG...CTTGAAGTCAGAGATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR TCA 90 bp | TCTGACTTCAAGGTCAGCCAGGTCAACAGAGTGCCAGGACACCCCAGGGCTATGCTTGAGCTTCTTCTCTaGGATGAGCCTCCACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SDFKVSQVNRVPGHPRAMLELLL*DEPPHQ Trigger: TTGGTGTGGAGGCTCATCTCAGAGAAGAAGCTCAAG...CATAGCCCTGGGGTGTCCTGGCACTCTGTTGACCTGGCTGACCTTGAAGTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR TCA 90 bp | GCCCGGGTTACCTTCTTGATGTGGAAAAGGAAGAGCAGCCGGAGAATCTGTACTGCTTCTTCTCTGAGATaGGCCTGGACAGAGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ARVTFLMWKRKSSRRICTASSLR*AWTEEP Trigger: GGGCTCCTCTGTCCAGGCTCATCTCAGAGAAGAAGC...AGTACAGATTCTCCGGCTGCTCTTCCTTTTCCACATCAAGAAGGTAACCCGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149589.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGGGGTGCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATCCCTCCTCCAAGATTGTaGAGTCCAGCTCCAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IGGAHLWFQHLEGRSRWIPPPRL*SPAPGH Trigger: ATGACCTGGAGCTGGACTCCACAATCTTGGAGGAGG...GATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR CCA 90 bp | TCCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGAAGTCACTCATGTTCCGCACCATGTaGTCCCTCTGGGCCGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SHIPHSCSMPTRVHGKSLMFRTM*SLWAAD Trigger: GTCGGCGGCCCAGAGGGACCACATGGTGCGGAACAT...GAGTGACTTCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGGTCCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGAAGTAGGAGAGGACGCTaGAGCCAAACTGGCCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: GRGPTSHILALCQLEFMGSRRGR*SQTGHR Trigger: TCGGTGGCCAGTTTGGCTCCAGCGTCCTCTCCTACT...TCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGGACCCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CCA 90 bp | CCATTTAATAGGGGGTGCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGAAGCGGTACAGCTCCTaGCCCACAAAGTCCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFNRGCTPLVSALGREKQKRYSS*PTKSSQ Trigger: CTGGGAGGACTTTGTGGGCCAGGAGCTGTACCGCTT...CTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTATTAAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGTCCAAGTCTCTGCTTACAGGGTTCCTTCTaGTCCCCTCCATCCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: WEVTLLPHPVGISGPSLCLQGSF*SPPSSC Trigger: GCATGAGGATGGAGGGGACCAGAAGGAACCCTGTAA...GCAGAGACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR GCA 90 bp | GAGTGGGACATGCTGTATACCAGAATGATGCAGGTAAGGAAGAAGGTGGCCCCCGCCGAAGCCTCACTGTaGGGTTGTAGTATTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EWDMLYTRMMQVRKKVAPAEASL*GCSIGR Trigger: TCTCCCAATACTACAACCGCACAGTGAGGCTTCGGC...GGGGGCCACCTTCTTCCTTACCTGCATCATTCTGGTATACAGCATGTCCCACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
||
| CDS-3UTR GCA 90 bp | AATAGGGGGTGCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATATGACGGGCTCAGCGTaGTGTTACTGTAGTAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: NRGCTPLVSALGREKQVDMTGSA*CYCSSR Trigger: ACGGCTACTACAGTAACAGCACGCTGAGCCCGTCAT...ATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CCA 90 bp | AGTTCATGGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGTCCAAGTTTTCTTCATAGGGGCTaGGCTCCAGGCCTTCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSWEVTLLPHPVGISGPSFLHRG*APGLRL Trigger: GAGACGAAGGCCTGGAGCCCAGCCCCTATGAAGAAA...ACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCCATGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CCA 90 bp | CATTTAATAGGGGGTGCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGAGCACCTTCAAGTCCTaGGAGGGTCTGGTCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLIGGAHLWFQHLEGRSRSTFKS*EGLVTS Trigger: AGAGGTGACCAGACCCTCCCAGGACTTGAAGGTGCT...CCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTATTAAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGTCCAAGTCTCTGCCTCTCCCCAAAGGAGTaGGACATGCTGTATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WEVTLLPHPVGISGPSLCLSPKE*DMLYTR Trigger: TCTGGTATACAGCATGTCCCACTCCTTTGGGGAGAG...GCAGAGACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CCA 90 bp | TTTAATAGGGGGTGCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGCTCATGCCAGGCAGGTaGTTCAGTAGTGTCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FNRGCTPLVSALGREKQVLMPGR*FSSVLG Trigger: ACCCAGGACACTACTGAACCACCTGCCTGGCATGAG...CACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTATTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR TCA 90 bp | CACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATCTCTGACTTCAAGCGAAGGCTTTGCTCTTaGATGAGCTGGTGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLWFQHLEGRSRWISDFKRRLCS*MSWWKE Trigger: CTCCTTCCACCAGCTCATTCAAGAGCAAAGCCTTCG...CTTGAAGTCAGAGATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR TCA 90 bp | TCCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGAAGTCACTCTTACCTCTGAGAAGGTaGGGACAGCCACCGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHIPHSCSMPTRVHGKSLLPLRR*GQPPCS Trigger: GCTGCACGGTGGCTGTCCTCACCTTCTCAGAGGTAA...GAGTGACTTCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGGGTCCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGCTGAATCATTACCTCTaGGAAGGTGAGGACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GKGSHIPHSCSMPTRVHGLNHYL*EGEDSH Trigger: GTGGCTGTCCTCACCTTCTCAGAGGTAATGATTCAG...CCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGGACCCCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR GCA 90 bp | AGTTCATGGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGTCCAAGTGCTCCTTCAGCTGAGTaGAGATGCTGTCCTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSWEVTLLPHPVGISGPSAPSAE*RCCPVG Trigger: TCCAACAGGACAGCATCTGCACTCAGCTGAAGGAGC...ACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCCATGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR TCA 90 bp | AGTTCATGGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGTCCAAGTGGCTTTGCTCTTGAATaGGCTGGTGGAAGGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSWEVTLLPHPVGISGPSGFALE*AGGRSH Trigger: ATGACTCCTTCCACCAGCTCATTCAAGAGCAAAGCC...ACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCCATGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CCA 90 bp | CCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGAAGTCACTCTAGCACCTTCAAGTCCTaGGAGGGTCTGGTCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTSHILALCQLEFMGSHSSTFKS*EGLVTS Trigger: AGAGGTGACCAGACCCTCCCAGGACTTGAAGGTGCT...AGAGTGACTTCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR TCA 90 bp | CCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGAAGTCACTCTGGAAGCAGAGCAAGGTaGGGAAGACAGTGCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PTSHILALCQLEFMGSHSGSRAR*GRQCSC Trigger: ACATGAGCACTGTCTTCCTCACCTTGCTCTGCTTCC...AGAGTGACTTCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR GCA 90 bp | CCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGAAGTCACTCTGCCGAAGCCTCACTGTaGGGTTGTAGTATTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTSHILALCQLEFMGSHSAEASL*GCSIGR Trigger: TCTCCCAATACTACAACCGCACAGTGAGGCTTCGGC...AGAGTGACTTCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| 3UTR CAA 72 bp | CATTTAATAGGGGGTGCACACCTCTGGTTTCAGCACTaGGAAGGGAGAAGCAGGTGGATCTCTGACTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLIGGAHLWFQH*EGRSRWISDFK Trigger: CTTGAAGTCAGAGATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTATTAAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR GCA 90 bp | TCCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGAAGTCACTCTCAAACTCAGGCTTCTaGCCCCTCTTGAGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHIPHSCSMPTRVHGKSLSNSGF*PLLSFF Trigger: GAAGAAGCTCAAGAGGGGGCAGAAGCCTGAGTTTGA...GAGTGACTTCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS GCA 90 bp | CCAGGTCATACAGGCGAAGGCTGGGCCGGGCAGAGGGCACCACATTaGCCAGCAAGGGCCGGCTGCTCCTGCGCCGAAGCCTCACTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGHTGEGWAGQRAPH*PARAGCSCAEASLC Trigger: GCACAGTGAGGCTTCGGCGCAGGAGCAGCCGGCCCTTGCTGGGCAATGTGGTGCCCTCTGCCCGGCCCAGCCTTCGCCTGTATGACCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 ENSMUST00000143406.8 |
||
| CDS GCA 90 bp | GGCTGGGCCGGGCAGAGGGCACCACATTGCCCAGCAAGGGCCGGCTaGTCCTGCGCCGAAGCCTCACTGTGCGGTTGTAGTATTGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GWAGQRAPHCPARAG*SCAEASLCGCSIGR Trigger: TCTCCCAATACTACAACCGCACAGTGAGGCTTCGGCGCAGGAGCAGCCGGCCCTTGCTGGGCAATGTGGTGCCCTCTGCCCGGCCCAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 ENSMUST00000143406.8 |
||
| CDS CCA 90 bp | CCTCCAAGATTGTGGAGTCCAGCTCCAGGTCATACAGGCGAAGGCTaGGCCGGGCAGAGGGCACCACATTGCCCAGCAAGGGCCGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PPRLWSPAPGHTGEG*AGQRAPHCPARAGC Trigger: GCAGCCGGCCCTTGCTGGGCAATGTGGTGCCCTCTGCCCGGCCCAGCCTTCGCCTGTATGACCTGGAGCTGGACTCCACAATCTTGGAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 ENSMUST00000143406.8 |
||
| CDS GCA 90 bp | CTGAGCCGGCTACAGCAGGAGAAGGCCCCGCTTCGACCCTGCAGGTaGCGCCGCTTTCCCTTTGGGCTCCAACTTTTCTCTCGAAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: LSRLQQEKAPLRPCR*RRFPFGLQLFSRRQ Trigger: CTGTCTTCGAGAGAAAAGTTGGAGCCCAAAGGGAAAGCGGCGGCACCTGCAGGGTCGAAGCGGGGCCTTCTCCTGCTGTAGCCGGCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000143406.8 |
||
| CDS GCA 90 bp | GGTGACCGGGGGTTACAGGGTTCCTTCTGGTCCCCTCCATCCTCATaGCAGGCAGGTGGTTCAGTAGTGTCCTGGGTTCTGCCAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GDRGLQGSFWSPPSS*QAGGSVVSWVLPGL Trigger: CAGGCCTGGCAGAACCCAGGACACTACTGAACCACCTGCCTGGCATGAGGATGGAGGGGACCAGAAGGAACCCTGTAACCCCCGGTCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CAA 90 bp | GGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGTCCAAGTCTCTGCTGCAGAGGGCACCACATaGCCCAGCAAGGGCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GKSLYCHILWGSQVQVSAAEGTT*PSKGRL Trigger: CAGCCGGCCCTTGCTGGGCAATGTGGTGCCCTCTGC...AGCAGAGACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR CAA 90 bp | TTTAATAGGGGGTGCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGCGTGGTGCCTGGCAGTaGGCCATCAGGCTGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FNRGCTPLVSALGREKQVRGAWQ*AIRLAF Trigger: GAAGGCCAGCCTGATGGCCAACTGCCAGGCACCACG...CACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTATTAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CAA 90 bp | GCTCCTTCAGCTGAGTGCAGATGCTGTCCTGTTGGACACGGGAAGCCCTCTTCTCATCCTCCTCCAAGATaGTGGAGTCCAGCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: APSAECRCCPVGHGKPSSHPPPR*WSPAPG Trigger: ACCTGGAGCTGGACTCCACAATCTTGGAGGAGGATG...AGAAGAGGGCTTCCCGTGTCCAACAGGACAGCATCTGCACTCAGCTGAAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGGGGAAGGGGTCCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCGCAGATGCTGTCCTGTaGGACACGGGAAGCCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TRGRGPTSHILALCQLEFADAVL*DTGSPL Trigger: AAGAGGGCTTCCCGTGTCCAACAGGACAGCATCTGC...GAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGGACCCCTTCCCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CAA 90 bp | GGGTCCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGAAGTCACCACCGTGCAGCCCATaGTGGAGCCCAGACACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSHIPHSCSMPTRVHGKSPPCSP*WSPDTA Trigger: TGCTGTGTCTGGGCTCCACAATGGGCTGCACGGTGG...TGACTTCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGTCCAAGTCTCTGCCCGAAGGCTTTGCTCTaGAATGAGCTGGTGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WEVTLLPHPVGISGPSLCPKALL*NELVEG Trigger: TCCTTCCACCAGCTCATTCAAGAGCAAAGCCTTCGG...GCAGAGACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CAA 90 bp | CAACTAGAGTTCATGGGAAGTCACTCTACTGCCACATCCTGTGGGGATCTCAGGGCCGCCGCTTTCCCTTaGGGCTCCAACTTTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QLEFMGSHSTATSCGDLRAAAFP*GSNFSL Trigger: GAGAGAAAAGTTGGAGCCCAAAGGGAAAGCGGCGGC...CCTGAGATCCCCACAGGATGTGGCAGTAGAGTGACTTCCCATGAACTCTAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CAA 90 bp | TCTCTGACTTCAAGGTCAGCCAGGTCAACAGAGTGCCAGGACACCCCAGGGCTAATCAGGCTGGCCTTCTaGATGTGGAAAAGGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLTSRSARSTECQDTPGLIRLAF*MWKRKS Trigger: GCTCTTCCTTTTCCACATCAAGAAGGCCAGCCTGAT...TAGCCCTGGGGTGTCCTGGCACTCTGTTGACCTGGCTGACCTTGAAGTCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CAA 90 bp | ATAGGGGGTGCACACCTCTGGTTTCAGCACTTGGAAGGGAGAAGCAGGTGGATCGCAGATGACCTTCCGTaGTCCTTTCACCACCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: IGGAHLWFQHLEGRSRWIADDLP*SFHHLD Trigger: ATCCAGGTGGTGAAAGGACAACGGAAGGTCATCTGC...GATCCACCTGCTTCTCCCTTCCAAGTGCTGAAACCAGAGGTGTGCACCCCCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CAA 90 bp | GGGTCCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGAAGTCACGCCACCCGAAGGCTTaGCTCTTGAATGAGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSHIPHSCSMPTRVHGKSRHPKA*LLNELV Trigger: CACCAGCTCATTCAAGAGCAAAGCCTTCGGGTGGCG...TGACTTCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
||
| CDS-3UTR CAA 90 bp | ATGACCGGATGTTATGCCTTCAGTTCAGGACATCAGTCTCGATGTGAGGAGCCCTGTGCGGTTGTAGTATaGGGAGATGATGGCCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: MTGCYAFSSGHQSRCEEPCAVVV*GDDGPT Trigger: CGTGGGGCCATCATCTCCCAATACTACAACCGCACA...GGGCTCCTCACATCGAGACTGATGTCCTGAACTGAAGGCATAACATCCGGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGGTCCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGACATCCTCCTCCAAGATaGTGGAGTCCAGCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRGPTSHILALCQLEFMGHPPPR*WSPAPG Trigger: ACCTGGAGCTGGACTCCACAATCTTGGAGGAGGATG...TCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGGACCCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS-3UTR CAA 90 bp | CCCACATCCCACATTCTTGCTCTATGCCAACTAGAGTTCATGGGAAGTCACTCTTGTGCGGTTGTAGTATaGGGAGATGATGGCCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: PTSHILALCQLEFMGSHSCAVVV*GDDGPT Trigger: CGTGGGGCCATCATCTCCCAATACTACAACCGCACA...AGAGTGACTTCCCATGAACTCTAGTTGGCATAGAGCAAGAATGTGGGATGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 |
||
| CDS CAA 72 bp | TACAGGCGAAGGCTGGGCCGGGCAGAGGGCACCACATaGCCCAGCAAGGGCCGGCTGCTCCTGCGCCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: YRRRLGRAEGTT*PSKGRLLLRRS Trigger: GCTTCGGCGCAGGAGCAGCCGGCCCTTGCTGGGCAATGTGGTGCCCTCTGCCCGGCCCAGCCTTCGCCTGTA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 ENSMUST00000143406.8 |
||
| CDS CAA 90 bp | TCCAGGTCATACAGGCGAAGGCTGGGCCGGGCAGAGGGCACCACATaGCCCAGCAAGGGCCGGCTGCTCCTGCGCCGAAGCCTCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SRSYRRRLGRAEGTT*PSKGRLLLRRSLTV Trigger: CACAGTGAGGCTTCGGCGCAGGAGCAGCCGGCCCTTGCTGGGCAATGTGGTGCCCTCTGCCCGGCCCAGCCTTCGCCTGTATGACCTGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 ENSMUST00000143406.8 |
||
| CDS GCA 72 bp | GGGCAGAGGGCACCACATTGCCCAGCAAGGGCCGGCTaGTCCTGCGCCGAAGCCTCACTGTGCGGTTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GQRAPHCPARAG*SCAEASLCGCS Trigger: ACTACAACCGCACAGTGAGGCTTCGGCGCAGGAGCAGCCGGCCCTTGCTGGGCAATGTGGTGCCCTCTGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 ENSMUST00000143406.8 |
||
| CDS CAA 90 bp | GGGCCGGCTGCTCCTGCGCCGAAGCCTCACTGTGCGGTTGTAGTATaGGGAGATGATGGCCCCACGGCTGCGACCAATGGTACGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GPAAPAPKPHCAVVV*GDDGPTAATNGTAG Trigger: CCCAGCCGTACCATTGGTCGCAGCCGTGGGGCCATCATCTCCCAATACTACAACCGCACAGTGAGGCTTCGGCGCAGGAGCAGCCGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 ENSMUST00000143406.8 |
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| CDS GCA 72 bp | AGGGCACCACATTGCCCAGCAAGGGCCGGCTGCTCCTaGGCCGAAGCCTCACTGTGCGGTTGTAGTATTGGG | + |
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Preference number: 6 (lower is better) Translates to: RAPHCPARAGCS*AEASLCGCSIG Trigger: CCCAATACTACAACCGCACAGTGAGGCTTCGGCGCAGGAGCAGCCGGCCCTTGCTGGGCAATGTGGTGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 ENSMUST00000143406.8 |
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| CDS CCA 72 bp | TTGTGGAGTCCAGCTCCAGGTCATACAGGCGAAGGCTaGGCCGGGCAGAGGGCACCACATTGCCCAGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: LWSPAPGHTGEG*AGQRAPHCPAR Trigger: CCTTGCTGGGCAATGTGGTGCCCTCTGCCCGGCCCAGCCTTCGCCTGTATGACCTGGAGCTGGACTCCACAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 ENSMUST00000143406.8 |
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| CDS CCA 72 bp | CTAAGGGCAGGAGCACCTTCAAGTCCTGGGAGGGTCTaGTCACCTCTGCCCTTCGTCTCCCGTGGTCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: LRAGAPSSPGRV*SPLPFVSRGLR Trigger: CCGGAGACCACGGGAGACGAAGGGCAGAGGTGACCAGACCCTCCCAGGACTTGAAGGTGCTCCTGCCCTTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131606.8 |
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| CDS GCA 72 bp | GAGCACCTTCAAGTCCTGGGAGGGTCTGGTCACCTCTaGCTAGACCCAAGGGCAGTAGCTCCAGCCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: EHLQVLGGSGHL*LDPRAVAPAPP Trigger: AGGAGGGGCTGGAGCTACTGCCCTTGGGTCTAGGCAGAGGTGACCAGACCCTCCCAGGACTTGAAGGTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026659.10 ENSMUST00000136729.8 ENSMUST00000143406.8 |
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| CDS CCA 72 bp | CTTCATAGGGGCTGGGCTCCAGGCCTTCGTCTCCCGTaGTCTCCGGGACATCGAGGGCTAAAGCCAGTGACT | + |
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Preference number: 6 (lower is better) Translates to: LHRGWAPGLRLP*SPGHRGLKPVT Trigger: AGTCACTGGCTTTAGCCCTCGATGTCCCGGAGACCACGGGAGACGAAGGCCTGGAGCCCAGCCCCTATGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026659.10 ENSMUST00000136729.8 ENSMUST00000143406.8 ENSMUST00000152304.3 |
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| CDS TCA 72 bp | GCCGAAGCCTCACTGTGCGGTTGTAGTATTGGGAGATaGTGGCCCCACGGCTGCGACCAATGGTACGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: AEASLCGCSIGR*WPHGCDQWYGW Trigger: CCAGCCGTACCATTGGTCGCAGCCGTGGGGCCATCATCTCCCAATACTACAACCGCACAGTGAGGCTTCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 ENSMUST00000143406.8 |
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| CDS CCA 72 bp | CTAAGGGCAGGAGCACCTTCAAGTCCTGGGAGGGTCTaGTCACCTCTGCCTAGACCCAAGGGCAGTAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LRAGAPSSPGRV*SPLPRPKGSSS Trigger: GGAGCTACTGCCCTTGGGTCTAGGCAGAGGTGACCAGACCCTCCCAGGACTTGAAGGTGCTCCTGCCCTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026659.10 ENSMUST00000136729.8 ENSMUST00000143406.8 |
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| CDS CAA 72 bp | GCTCCTGCGCCGAAGCCTCACTGTGCGGTTGTAGTATaGGGAGATGATGGCCCCACGGCTGCGACCAATGGT | + |
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Preference number: 6 (lower is better) Translates to: APAPKPHCAVVV*GDDGPTAATNG Trigger: ACCATTGGTCGCAGCCGTGGGGCCATCATCTCCCAATACTACAACCGCACAGTGAGGCTTCGGCGCAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026659.10 ENSMUST00000131606.8 ENSMUST00000143406.8 |
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| CDS CAA 72 bp | CCCCGCTTCGACCCTGCAGGTGCCGCCGCTTTCCCTTaGGGCTCCAACTTTTCTCTCGAAGACAGCGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PRFDPAGAAAFP*GSNFSLEDSAS Trigger: AGAAGCGCTGTCTTCGAGAGAAAAGTTGGAGCCCAAAGGGAAAGCGGCGGCACCTGCAGGGTCGAAGCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026659.10 ENSMUST00000143406.8 |
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| CDS CCA 72 bp | TTCCTTCTGGTCCCCTCCATCCTCATGCCAGGCAGGTaGTTCAGTAGTGTCCTGGGTTCTGCCAGGCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: FLLVPSILMPGR*FSSVLGSARPA Trigger: AGCAGGCCTGGCAGAACCCAGGACACTACTGAACCACCTGCCTGGCATGAGGATGGAGGGGACCAGAAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026659.10 |
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