Pregenerated sensors for TMC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019734Ensembl transcript IDs: ENSMUST00000038743.15, ENSMUST00000121743.2, ENSMUST00000145034.3
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGGGCTGAAGGTTCAGCCAGACTTATCAGGAAGTTCCATTCCTTaGGCTCAGAGCCACAGCTCGCTGGGCCAGGAAGACTTTATTCTG | + |
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Preference number: 1 (lower is better) Translates to: EGLKVQPDLSGSSIP*AQSHSSLGQEDFIL Trigger: CAGAATAAAGTCTTCCTGGCCCAGCGAGCTGTGGCTCTGAGCTCAAGGAATGGAACTTCCTGATAAGTCTGGCTGAACCTTCAGCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145034.3 |
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| 3UTR GCA 90 bp | CTTGAGCTCAGAGCCACAGCTCGCTGGGCCAGGAAGACTTTATTCTaGACTTCCTGCGGGCAAAAAGGAGCGAAAGTGAAGCACACCTTT | + |
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Preference number: 1 (lower is better) Translates to: LELRATARWARKTLF*TSCGQKGAKVKHTF Trigger: AAAGGTGTGCTTCACTTTCGCTCCTTTTTGCCCGCAGGAAGTGCAGAATAAAGTCTTCCTGGCCCAGCGAGCTGTGGCTCTGAGCTCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145034.3 |
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| 3UTR CCA 90 bp | ACTTATCAGGAAGTTCCATTCCTTGAGCTCAGAGCCACAGCTCGCTaGGCCAGGAAGACTTTATTCTGCACTTCCTGCGGGCAAAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: TYQEVPFLELRATAR*ARKTLFCTSCGQKG Trigger: TCCTTTTTGCCCGCAGGAAGTGCAGAATAAAGTCTTCCTGGCCCAGCGAGCTGTGGCTCTGAGCTCAAGGAATGGAACTTCCTGATAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145034.3 |
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| 3UTR TCA 72 bp | AAGGTTCAGCCAGACTTATCAGGAAGTTCCATTCCTTaGGCTCAGAGCCACAGCTCGCTGGGCCAGGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: KVQPDLSGSSIP*AQSHSSLGQED Trigger: GTCTTCCTGGCCCAGCGAGCTGTGGCTCTGAGCTCAAGGAATGGAACTTCCTGATAAGTCTGGCTGAACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145034.3 |
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| 3UTR GCA 72 bp | AGAGCCACAGCTCGCTGGGCCAGGAAGACTTTATTCTaGACTTCCTGCGGGCAAAAAGGAGCGAAAGTGAAG | + |
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Preference number: 3 (lower is better) Translates to: RATARWARKTLF*TSCGQKGAKVK Trigger: CTTCACTTTCGCTCCTTTTTGCCCGCAGGAAGTGCAGAATAAAGTCTTCCTGGCCCAGCGAGCTGTGGCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145034.3 |
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| 3UTR GCA 72 bp | GCTCGCTGGGCCAGGAAGACTTTATTCTGCACTTCCTaGGGGCAAAAAGGAGCGAAAGTGAAGCACACCTTT | + |
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Preference number: 3 (lower is better) Translates to: ARWARKTLFCTS*GQKGAKVKHTF Trigger: AAAGGTGTGCTTCACTTTCGCTCCTTTTTGCCCGCAGGAAGTGCAGAATAAAGTCTTCCTGGCCCAGCGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145034.3 |
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| 3UTR-3UTR CAA 90 bp | GTCACTGAAGCTGAGGGGCTGAAGGTTCAGCCAGACTTATCAGGAAGTTCCATTCAGAGGGCGGGGAATTaGGTTCCAGAGATGAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: VTEAEGLKVQPDLSGSSIQRAGN*VPEMKE Trigger: CTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTG...AATGGAACTTCCTGATAAGTCTGGCTGAACCTTCAGCCCCTCAGCTTCAGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145034.3 |
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| 3UTR TCA 72 bp | CCATCACTTGATATGAAGTCACTGAAGCTGAGGGGCTaGAGGTTCAGCCAGACTTATCAGGAAGTTCCATTC | + |
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Preference number: 3 (lower is better) Translates to: PSLDMKSLKLRG*RFSQTYQEVPF Trigger: GAATGGAACTTCCTGATAAGTCTGGCTGAACCTTCAGCCCCTCAGCTTCAGTGACTTCATATCAAGTGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145034.3 |
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| CDS-3UTR GCA 90 bp | CGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTTGGCGCAGCCGCACGTaGACGTCCCCGCAGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVAEGGEFGSRDERVPSLWRSRT*TSPQRP Trigger: TGGCCTCTGCGGGGACGTGCACGTGCGGCTGCGCCA...AAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | TTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACAGGGCCAGGGGGACCTaGAGGAGCCCCTTCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FGWQRAGNLVPEMKESHHRARGT*RSPFQP Trigger: TGGCTGGAAGGGGCTCCTCCAGGTCCCCCTGGCCCT...GTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | CGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTAGGGCCAGGGGGACCTaGAGGAGCCCCTTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVAEGGEFGSRDERVPSLRARGT*RSPFQP Trigger: TGGCTGGAAGGGGCTCCTCCAGGTCCCCCTGGCCCT...AAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | AGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGGGAGCTGGAGCAGGCTaGGGACTGGCCCCAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVAFGWQRAGNLVPEMKEGAGAG*GLAPGF Trigger: GAAGCCTGGGGCCAGTCCCCAGCCTGCTCCAGCTCC...CTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038743.15 |
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| CDS-3UTR CCA 90 bp | TTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTGGCTTTCCGGGAGCTaGAGCAGGCTGGGGACTGGC | + |
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Preference number: 4 (lower is better) Translates to: FGWQRAGNLVPEMKESHHWLSGS*SRLGTG Trigger: GCCAGTCCCCAGCCTGCTCCAGCTCCCGGAAAGCCA...GTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038743.15 |
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| CDS-3UTR GCA 90 bp | GCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCCTGTGTGCCCGCCTTaGCTGCATAGGCCAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: AFGWQRAGNLVPEMKESHPVCPP*LHRPGK Trigger: CTTCCCTGGCCTATGCAGGCAAGGCGGGCACACAGG...ATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | CGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTAGCTGCCCTGTAGCCTaGCTCTTCCTGTGTGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RVAEGGEFGSRDERVPSLSCPVA*LFLCAR Trigger: GCGGGCACACAGGAAGAGCCAGGCTACAGGGCAGCT...AAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR TCA 90 bp | TTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACGGTGCGGGAAGCCGGTaGGTAGATGGAGAAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: FGWQRAGNLVPEMKESHHGAGSR*VDGEEG Trigger: ACCCTCTTCTCCATCTACTCACCGGCTTCCCGCACC...GTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR GCA 90 bp | TTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTGTGCCCGCCTTGCCTaGATAGGCCAGGGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FGWQRAGNLVPEMKESHHCARLA*IGQGSS Trigger: GGAACTTCCCTGGCCTATGCAGGCAAGGCGGGCACA...GTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | GAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGCGATGGGCCTGTTCTaGCTTTCCGGGAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ECSIRVAEGGEFGSRDERAMGLF*LSGSWS Trigger: GCTCCAGCTCCCGGAAAGCCAGAACAGGCCCATCGC...TCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038743.15 |
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| CDS-3UTR CCA 90 bp | GAGAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAAGCTGCCCTGTAGCCTaGCTCTTCCTGTGTGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ESVAFGWQRAGNLVPEMKSCPVA*LFLCAR Trigger: GCGGGCACACAGGAAGAGCCAGGCTACAGGGCAGCT...TTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | AGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGGAGGGAGGCTCTCAATaGCCTCAGGGATCTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVAFGWQRAGNLVPEMKEEGGSQ*PQGSGP Trigger: GGGCCCAGATCCCTGAGGCCATTGAGAGCCTCCCTC...CTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR TCA 90 bp | GAGAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAACGGTCTGCGCATAGATaGGCCCCAGCACCTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESVAFGWQRAGNLVPEMKRSAHR*APAPHL Trigger: CAGATGAGGTGCTGGGGCTCATCTATGCGCAGACCG...TTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR TCA 90 bp | AGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGCGGTCTGCGCATAGATaGGCCCCAGCACCTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: SVAFGWQRAGNLVPEMKERSAHR*APAPHL Trigger: CAGATGAGGTGCTGGGGCTCATCTATGCGCAGACCG...CTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR GCA 90 bp | ATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCATGTGCCCGCCTTGCCTaGATAGGCCAGGGAAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: IRVAEGGEFGSRDERVPSCARLA*IGQGSS Trigger: GGAACTTCCCTGGCCTATGCAGGCAAGGCGGGCACA...TGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR GCA 90 bp | TTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTGGATGCTCGGAAGGTaGGGGAAGCCGGTGAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: FGWQRAGNLVPEMKESHHWMLGR*GKPVSR Trigger: TCTACTCACCGGCTTCCCGCACCTTCCGAGCATCCA...GTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | AGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGGGATCTGGGCCCAAATaGACAGCTTCCCGCGGAACG | + |
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Preference number: 4 (lower is better) Translates to: SVAFGWQRAGNLVPEMKEGSGPK*TASRGT Trigger: CGTTCCGCGGGAAGCTGTCCATTTGGGCCCAGATCC...CTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR TCA 90 bp | ATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCAACTGGACCAACAGCGTaGCCAACAGGCCCATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: IRVAEGGEFGSRDERVPSTGPTA*PTGPSA Trigger: TGCTGATGGGCCTGTTGGTCACGCTGTTGGTCCAGT...TGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR TCA 90 bp | TTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACAAATTCTGGGCAGTCTaGGGGAGGCTCTCAATGGCC | + |
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Preference number: 4 (lower is better) Translates to: FGWQRAGNLVPEMKESHHKFWAV*GRLSMA Trigger: GGCCATTGAGAGCCTCCCTCAGACTGCCCAGAATTT...GTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR TCA 90 bp | AGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCAAAATTCTGGGCAGTCTaGGGGAGGCTCTCAATGGCC | + |
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Preference number: 4 (lower is better) Translates to: SIRVAEGGEFGSRDERVPKFWAV*GRLSMA Trigger: GGCCATTGAGAGCCTCCCTCAGACTGCCCAGAATTT...TGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR TCA 90 bp | AGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCAGGAAGTTCCATTCCTTaGGCTCAGAGCCACAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: SIRVAEGGEFGSRDERVPGSSIP*AQSHSS Trigger: CGAGCTGTGGCTCTGAGCTCAAGGAATGGAACTTCC...TGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR GCA 90 bp | GCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATGGCCTTGCATCCTTCTaGCTCCATGTTTCCCCCACA | + |
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Preference number: 4 (lower is better) Translates to: AFGWQRAGNLVPEMKESHGLASF*LHVSPT Trigger: TGTGGGGGAAACATGGAGGCAGAAGGATGCAAGGCC...ATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | TTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTCCAGTAGGCAGCCCTaGATTCAGAGCCAGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FGWQRAGNLVPEMKESHHSSRQP*IQSQKP Trigger: TGGCTTCTGGCTCTGAATCCAGGGCTGCCTACTGGA...GTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | AGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTACAAAATGATGCGCTaGCGCAGCCGCACGTGCACG | + |
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Preference number: 4 (lower is better) Translates to: SVAFGWQRAGNLVPEMKEYKMMR*RSRTCT Trigger: CGTGCACGTGCGGCTGCGCCAGCGCATCATTTTGTA...CTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | ATTGAGAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGTACAAAATGATGCGCTaGCGCAGCCGCACGTGCACG | + |
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Preference number: 4 (lower is better) Translates to: IESVAFGWQRAGNLVPEMYKMMR*RSRTCT Trigger: CGTGCACGTGCGGCTGCGCCAGCGCATCATTTTGTA...CATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTCTCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | ATTGAGAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGCACACCTTGGCTCGTTaGCTCAGAGTCTGCTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: IESVAFGWQRAGNLVPEMHTLAR*LRVCSA Trigger: TGCGGAGCAGACTCTGAGCCAACGAGCCAAGGTGTG...CATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTCTCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | CGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTAGTTTGTACATCTCCTaGCCCAGCCGAGTCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RVAEGGEFGSRDERVPSLSLYIS*PSRVSQ Trigger: CTGGGAGACTCGGCTGGGCCAGGAGATGTACAAACT...AAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | TTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACAGTTTGTACATCTCCTaGCCCAGCCGAGTCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: FGWQRAGNLVPEMKESHHSLYIS*PSRVSQ Trigger: CTGGGAGACTCGGCTGGGCCAGGAGATGTACAAACT...GTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | AGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGACCTCATCTGGCACCTaGAACTCCAGGGTTCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: SVAFGWQRAGNLVPEMKETSSGT*NSRVPD Trigger: GTCGGGAACCCTGGAGTTCCAGGTGCCAGATGAGGT...CTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | GCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATATGGCCTCAGGGATCTaGGCCCAAATGGACAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: AFGWQRAGNLVPEMKESHMASGI*AQMDSF Trigger: GAAGCTGTCCATTTGGGCCCAGATCCCTGAGGCCAT...ATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | CGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTATGGCCTCAGGGATCTaGGCCCAAATGGACAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RVAEGGEFGSRDERVPSLMASGI*AQMDSF Trigger: GAAGCTGTCCATTTGGGCCCAGATCCCTGAGGCCAT...AAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR TCA 90 bp | CGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTGTTTCTGCAAAGGCCTaGAGGCTCCTTCCTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RVAEGGEFGSRDERVPSLVSAKA*RLLPPS Trigger: TGAAGGAGGAAGGAGCCTTCAGGCCTTTGCAGAAAC...AAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038743.15 |
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| CDS-3UTR TCA 90 bp | TTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACATAGGAACCACAGGGTaGAGAGATGTTAGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: FGWQRAGNLVPEMKESHHIGTTG*RDVRAR Trigger: CCTGGCCCTAACATCTCTTCACCCTGTGGTTCCTAT...GTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR TCA 90 bp | AGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCAGTAGTTCATACAAAATaGTGCGCTGGCGCAGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: SIRVAEGGEFGSRDERVPVVHTK*CAGAAA Trigger: TGCGGCTGCGCCAGCGCATCATTTTGTATGAACTAC...TGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR GCA 90 bp | GCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATTATAGCCGCAGGCCTTaGATCCTTCTGCCTCCATGT | + |
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Preference number: 4 (lower is better) Translates to: AFGWQRAGNLVPEMKESHYSRRP*ILLPPC Trigger: ACATGGAGGCAGAAGGATGCAAGGCCTGCGGCTATA...ATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | ATTGAGAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGTCCAGTAGGCAGCCCTaGATTCAGAGCCAGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: IESVAFGWQRAGNLVPEMSSRQP*IQSQKP Trigger: TGGCTTCTGGCTCTGAATCCAGGGCTGCCTACTGGA...CATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTCTCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CCA 90 bp | AGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCATCGACCACACCTTaGCTCGTTGGCTCAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIRVAEGGEFGSRDERVPSSTTP*LVGSES Trigger: AGACTCTGAGCCAACGAGCCAAGGTGTGGTCGATGA...TGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGAAGCTGAGGGGCGAGGGAGGCTCTCAATaGCCTCAGGGATCTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRDERVPSLDMKSLKLRGEGGSQ*PQGSGP Trigger: GGGCCCAGATCCCTGAGGCCATTGAGAGCCTCCCTC...GCCCCTCAGCTTCAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | TTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACAGAGCCACAGCTCGCTaGGCCAGGAAGACTTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: FGWQRAGNLVPEMKESHHRATAR*ARKTLF Trigger: GAATAAAGTCTTCCTGGCCCAGCGAGCTGTGGCTCT...GTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| 3UTR CAA 72 bp | GAAGGTTCAGCCAGACTTATCAGGAAGTTCCATTCCTaGAGCTCAGAGCCACAGCTCGCTGGGCCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGSARLIRKFHS*SSEPQLAGPGR Trigger: TCTTCCTGGCCCAGCGAGCTGTGGCTCTGAGCTCAAGGAATGGAACTTCCTGATAAGTCTGGCTGAACCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145034.3 |
||
| CDS-3UTR TCA 90 bp | AGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGGTAGTTCATACAAAATaGTGCGCTGGCGCAGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVAFGWQRAGNLVPEMKEVVHTK*CAGAAA Trigger: TGCGGCTGCGCCAGCGCATCATTTTGTATGAACTAC...CTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGAAGCTGAGGGGCGGTGCGGGAAGCCGGTaGGTAGATGGAGAAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRDERVPSLDMKSLKLRGGAGSR*VDGEEG Trigger: ACCCTCTTCTCCATCTACTCACCGGCTTCCCGCACC...GCCCCTCAGCTTCAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGAAGCTGAGGGGCGAGCCAGAAGCCAGCTaGCCTGTAGCCTGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRDERVPSLDMKSLKLRGEPEAS*PVAWLF Trigger: GAAGAGCCAGGCTACAGGGCAGCTGGCTTCTGGCTC...GCCCCTCAGCTTCAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGAGAAGTAGGACTCAGTaGCTGCTCCAAACTGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVAFGWQRAGNLVPEMKERSRTQ*LLQTDP Trigger: GGGGTCAGTTTGGAGCAGGCACTGAGTCCTACTTCT...CTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | AGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCACAGGCCATGAGTGTGTaGAATATAGGAACCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SIRVAEGGEFGSRDERVPQAMSV*NIGTTG Trigger: CCCTGTGGTTCCTATATTCCACACACTCATGGCCTG...TGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | GAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGACTCGGTGACTGTAGCTaGTCAGAATGTCTGACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ECSIRVAEGGEFGSRDERLGDCS*SECLTP Trigger: CGGAGTCAGACATTCTGACCAGCTACAGTCACCGAG...TCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | ATTGAGAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGCTCGGTGACTGTAGCTaGTCAGAATGTCTGACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IESVAFGWQRAGNLVPEMLGDCS*SECLTP Trigger: CGGAGTCAGACATTCTGACCAGCTACAGTCACCGAG...CATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTCTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | GCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATTCAAGGTGTACTCGGTaGCCCAGTAGATGCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: AFGWQRAGNLVPEMKESHSRCTR*PSRCHR Trigger: TCTATGGCATCTACTGGGCCACCGAGTACACCTTGA...ATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | GAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAAGAGCCACAGCTCGCTaGGCCAGGAAGACTTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: ECSIRVAEGGEFGSRDERRATAR*ARKTLF Trigger: GAATAAAGTCTTCCTGGCCCAGCGAGCTGTGGCTCT...TCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR GCA 90 bp | AGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCACATTTGTGCAGTTTCTaGAAAGGCCTGAAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SIRVAEGGEFGSRDERVPHLCSF*KGLKAP Trigger: AGGAGCCTTCAGGCCTTTGCAGAAACTGCACAAATG...TGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038743.15 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGAAGCTGAGGGGCTGGATGCTCGGAAGGTaGGGGAAGCCGGTGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRDERVPSLDMKSLKLRGWMLGR*GKPVSR Trigger: TCTACTCACCGGCTTCCCGCACCTTCCGAGCATCCA...GCCCCTCAGCTTCAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGCAGGCCATGAGTGTGTaGAATATAGGAACCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVAFGWQRAGNLVPEMKEQAMSV*NIGTTG Trigger: CCCTGTGGTTCCTATATTCCACACACTCATGGCCTG...CTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGAAGCTGAGGGGATCTGGGCCCAAATaGACAGCTTCCCGCGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: GSRDERVPSLDMKSLKLRGSGPK*TASRGT Trigger: CGTTCCGCGGGAAGCTGTCCATTTGGGCCCAGATCC...CCTCAGCTTCAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | AGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCAACTTCCGTCTCTATCTaGCGTTTGAGCTCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SIRVAEGGEFGSRDERVPTSVSI*RLSSEM Trigger: CATCTCTGAGCTCAAACGCCAGATAGAGACGGAAGT...TGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTGAGCTCAGAGCCACAGCTCGCTGGGCCAGGAAGACTTTATTCTGCACTTCTCACCGTCTCTATCTaGCGTTTGAGCTCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLSSEPQLAGPGRLYSALLTVSI*RLSSEM Trigger: CATCTCTGAGCTCAAACGCCAGATAGAGACGGTGAG...AAGTGCAGAATAAAGTCTTCCTGGCCCAGCGAGCTGTGGCTCTGAGCTCAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145034.3 |
||
| CDS-3UTR GCA 90 bp | GGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGGAGCCAGAAGCCAGCTaGCCTGTAGCCTGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GEFGSRDERVPSLDMKSLEPEAS*PVAWLF Trigger: GAAGAGCCAGGCTACAGGGCAGCTGGCTTCTGGCTC...CAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGAAGCTGAGGCACACCTTGGCTCGTTaGCTCAGAGTCTGCTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRDERVPSLDMKSLKLRHTLAR*LRVCSA Trigger: TGCGGAGCAGACTCTGAGCCAACGAGCCAAGGTGTG...CCTCAGCTTCAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGAAGCTGAGGACCTCATCTGGCACCTaGAACTCCAGGGTTCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSRDERVPSLDMKSLKLRTSSGT*NSRVPD Trigger: GTCGGGAACCCTGGAGTTCCAGGTGCCAGATGAGGT...CCTCAGCTTCAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGACTTCCGTCTCTATCTaGCGTTTGAGCTCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SVAFGWQRAGNLVPEMKETSVSI*RLSSEM Trigger: CATCTCTGAGCTCAAACGCCAGATAGAGACGGAAGT...CTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGAAGCTGAGGCCGGGGAAATCAGCCTaGCTCACCGTCTCTATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRDERVPSLDMKSLKLRPGKSA*LTVSIW Trigger: CCAGATAGAGACGGTGAGCCAGGCTGATTTCCCCGG...CCTCAGCTTCAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145034.3 |
||
| 3UTR CAA 72 bp | GAGAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTaGGTTCCAGAGATGAAAGAGTCCCATCACTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: ESVAFGWQRAGN*VPEMKESHHLI Trigger: TATCAAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 ENSMUST00000145034.3 |
||
| CDS-3UTR TCA 90 bp | GGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGACTGGACCAACAGCGTaGCCAACAGGCCCATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GEFGSRDERVPSLDMKSLTGPTA*PTGPSA Trigger: TGCTGATGGGCCTGTTGGTCACGCTGTTGGTCCAGT...CAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR TCA 90 bp | GGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGAAGCTGAGGGGAAGTTCCATTCCTTaGGCTCAGAGCCACAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GSRDERVPSLDMKSLKLRGSSIP*AQSHSS Trigger: CGAGCTGTGGCTCTGAGCTCAAGGAATGGAACTTCC...CCTCAGCTTCAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR GCA 90 bp | ATTGAGAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGGTGAGATTCCATTTGTaGAGTTTCTGCAAAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IESVAFGWQRAGNLVPEMVRFHL*SFCKGL Trigger: CAGGCCTTTGCAGAAACTGCACAAATGGAATCTCAC...CATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTCTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038743.15 |
||
| CDS-3UTR GCA 90 bp | AGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCAAGGAAGACTTTATTCTaGACTTCCGTCTCTATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIRVAEGGEFGSRDERVPRKTLF*TSVSIW Trigger: CCAGATAGAGACGGAAGTGCAGAATAAAGTCTTCCT...TGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGAAGCTGAGGGGCAGTTCCCGGGAAGGGTaGGATTCCATTTGTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRDERVPSLDMKSLKLRGSSREG*DSICAV Trigger: AACTGCACAAATGGAATCTCACCCTTCCCGGGAACT...GCCCCTCAGCTTCAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038743.15 |
||
| CDS-3UTR GCA 90 bp | ATTGAGAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGGATTTCAATGACAGATaGCACCAGGTTGAGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IESVAFGWQRAGNLVPEMDFNDR*HQVEKE Trigger: CTCTTTCTCAACCTGGTGGCATCTGTCATTGAAATC...CATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTCTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGGGCCTTGCATCCTTCTaGCTCCATGTTTCCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GEFGSRDERVPSLDMKSLGLASF*LHVSPT Trigger: TGTGGGGGAAACATGGAGGCAGAAGGATGCAAGGCC...CAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGAGGAAGACTTTATTCTaGACTTCCGTCTCTATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVAFGWQRAGNLVPEMKERKTLF*TSVSIW Trigger: CCAGATAGAGACGGAAGTGCAGAATAAAGTCTTCCT...CTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGAAGCTGAGGAAAAGAAGTTTGCCGTaGATGCTCGGAAGGTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRDERVPSLDMKSLKLRKRSLP*MLGRCG Trigger: CCCGCACCTTCCGAGCATCCACGGCAAACTTCTTTT...CCTCAGCTTCAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR TCA 90 bp | CGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTCAGGGCTGTATAGTTTaGAAGCCTTCTTTCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RVAEGGEFGSRDERVPSLQGCIV*KPSFIF Trigger: AAAAATGAAAGAAGGCTTTCAAACTATACAGCCCTG...AAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR TCA 90 bp | TTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACCAGGGCTGTATAGTTTaGAAGCCTTCTTTCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FGWQRAGNLVPEMKESHHQGCIV*KPSFIF Trigger: AAAAATGAAAGAAGGCTTTCAAACTATACAGCCCTG...GTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGAGAAGTAGGACTCAGTaGCTGCTCCAAACTGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GEFGSRDERVPSLDMKSLRSRTQ*LLQTDP Trigger: GGGGTCAGTTTGGAGCAGGCACTGAGTCCTACTTCT...CAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGTATAGCCGCAGGCCTTaGATCCTTCTGCCTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GEFGSRDERVPSLDMKSLYSRRP*ILLPPC Trigger: ACATGGAGGCAGAAGGATGCAAGGCCTGCGGCTATA...CAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | GGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGTCATCGACCACACCTTaGCTCGTTGGCTCAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GEFGSRDERVPSLDMKSLSSTTP*LVGSES Trigger: AGACTCTGAGCCAACGAGCCAAGGTGTGGTCGATGA...CAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGAAGCTGAGGTCAAGGTGTACTCGGTaGCCCAGTAGATGCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSRDERVPSLDMKSLKLRSRCTR*PSRCHR Trigger: TCTATGGCATCTACTGGGCCACCGAGTACACCTTGA...CCTCAGCTTCAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CCA 90 bp | GGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGAAAAGAAGTTTGCCGTaGATGCTCGGAAGGTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GEFGSRDERVPSLDMKSLKRSLP*MLGRCG Trigger: CCCGCACCTTCCGAGCATCCACGGCAAACTTCTTTT...CAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGGATTTCAATGACAGATaGCACCAGGTTGAGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GEFGSRDERVPSLDMKSLDFNDR*HQVEKE Trigger: CTCTTTCTCAACCTGGTGGCATCTGTCATTGAAATC...CAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS TCA 90 bp | AGATGCCATAGAAGGCCGCCCCGAGCAGCGCGAGGACCAGCACGTTaGGCAGCGCCCTCATCGACCACACCTTGGCTCGTTGGCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RCHRRPPRAARGPAR*AAPSSTTPWLVGSE Trigger: CTCTGAGCCAACGAGCCAAGGTGTGGTCGATGAGGGCGCTGCTCAACGTGCTGGTCCTCGCGCTGCTCGGGGCGGCCTTCTATGGCATCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS CCA 90 bp | TCTGTCGGACAAGGGGCGTCTCCTGTAGTGTCAAGGTGTACTCGGTaGCCCAGTAGATGCCATAGAAGGCCGCCCCGAGCAGCGCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SVGQGASPVVSRCTR*PSRCHRRPPRAARG Trigger: TCCTCGCGCTGCTCGGGGCGGCCTTCTATGGCATCTACTGGGCCACCGAGTACACCTTGACACTACAGGAGACGCCCCTTGTCCGACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS TCA 90 bp | GCCGGACTACTGCTTCCTCTAGGTCCACCTGTAGTTCATACAAAATaGTGCGCTGGCGCAGCCGCACGTGCACGTCCCCGCAGAGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AGLLLPLGPPVVHTK*CAGAAARARPRRGQ Trigger: TTGGCCTCTGCGGGGACGTGCACGTGCGGCTGCGCCAGCGCATCATTTTGTATGAACTACAGGTGGACCTAGAGGAAGCAGTAGTCCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS TCA 90 bp | CAGGCCTTGCATCCTTCTGCCTCCATGTTTCCCCCACACGTGATCTaGCTCCACAGAGAGACCAGAAGGAACACCAGCGAGGCCAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: QALHPSASMFPPHVI*LHRETRRNTSEARR Trigger: GCGTCTGGCCTCGCTGGTGTTCCTTCTGGTCTCTCTGTGGAGTCAGATCACGTGTGGGGGAAACATGGAGGCAGAAGGATGCAAGGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS TCA 90 bp | AGCCGCAGGCCTTGCATCCTTCTGCCTCCATGTTTCCCCCACACGTaGTCTGACTCCACAGAGAGACCAGAAGGAACACCAGCGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRRPCILLPPCFPHT*SDSTERPEGTPARP Trigger: TGGCCTCGCTGGTGTTCCTTCTGGTCTCTCTGTGGAGTCAGATCACGTGTGGGGGAAACATGGAGGCAGAAGGATGCAAGGCCTGCGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS GCA 90 bp | GAGAAAGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCAGTGCCTaGTCCAAACTGACCCCCAATTTTCTTCAGCGTCCATGCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EKEQEAQQGEVGLSA*SKLTPNFLQRPCPG Trigger: CCCTGGGCATGGACGCTGAAGAAAATTGGGGGTCAGTTTGGAGCAGGCACTGAGTCCTACTTCTCCCTGCTGCGCTTCCTGCTCTTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS CCA 90 bp | TCGCCAGACCCACAAGGAGAACCAGGGGGAAAAAGAAGTTTGCCGTaGATGCTCGGAAGGTGCGGGAAGCCGGTGAGTAGATGGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPDPQGEPGGKRSLP*MLGRCGKPVSRWRR Trigger: TCTTCTCCATCTACTCACCGGCTTCCCGCACCTTCCGAGCATCCACGGCAAACTTCTTTTTCCCCCTGGTTCTCCTTGTGGGTCTGGCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CAA 90 bp | GCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATGGGGGAAAAAGAAGTTaGCCGTGGATGCTCGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AFGWQRAGNLVPEMKESHGGKRS*PWMLGR Trigger: CCTTCCGAGCATCCACGGCAAACTTCTTTTTCCCCC...ATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CAA 90 bp | TTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACGTCTCTATCTGGCGTTaGAGCTCAGAGATGAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: FGWQRAGNLVPEMKESHHVSIWR*SSEMRR Trigger: ACGCCTCATCTCTGAGCTCAAACGCCAGATAGAGAC...GTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 ENSMUST00000145034.3 |
||
| CDS GCA 90 bp | CTGCATAGGCCAGGGAAGTTCCCGGGAAGGGTGAGATTCCATTTGTaGAGTTTCTGCAAAGGCCTGAAGGCTCCTTCCTCCTTCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: LHRPGKFPGRVRFHL*SFCKGLKAPSSFII Trigger: GATGATGAAGGAGGAAGGAGCCTTCAGGCCTTTGCAGAAACTGCACAAATGGAATCTCACCCTTCCCGGGAACTTCCCTGGCCTATGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038743.15 |
||
| CDS-3UTR CAA 90 bp | CGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTTCTTTCATTTTTCCCTaGGTCCGGGAAAGCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RVAEGGEFGSRDERVPSLSFIFP*VRESCR Trigger: CCGACAGCTTTCCCGGACCAAGGGAAAAATGAAAGA...AAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CAA 90 bp | ATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCATCTCCAGAGAGCAAGTaGAAAAGCTGGGTGGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IRVAEGGEFGSRDERVPSSPESK*KSWVGK Trigger: CTTCCCCACCCAGCTTTTCAACTTGCTCTCTGGAGA...TGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CAA 90 bp | TTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACAGTGAGGCAATGAACTaGAACACAGGAGGCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: FGWQRAGNLVPEMKESHHSEAMN*NTGGST Trigger: TGTGCTGCCTCCTGTGTTCAAGTTCATTGCCTCACT...GTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CAA 90 bp | AGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCAAGTGAGGCAATGAACTaGAACACAGGAGGCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SIRVAEGGEFGSRDERVPSEAMN*NTGGST Trigger: TGTGCTGCCTCCTGTGTTCAAGTTCATTGCCTCACT...TGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CAA 90 bp | ATTGAGAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGGTCTCTATCTGGCGTTaGAGCTCAGAGATGAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: IESVAFGWQRAGNLVPEMVSIWR*SSEMRR Trigger: ACGCCTCATCTCTGAGCTCAAACGCCAGATAGAGAC...CATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTCTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 ENSMUST00000145034.3 |
||
| CDS-3UTR CAA 90 bp | ATTGAGAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAGGAAGTTCCATTCCTaGAGCTCAGAGCCACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IESVAFGWQRAGNLVPEMRKFHS*SSEPQL Trigger: GAGCTGTGGCTCTGAGCTCAAGGAATGGAACTTCCT...CATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTCTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CAA 90 bp | GAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGATCTTTCATTTTTCCCTaGGTCCGGGAAAGCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ECSIRVAEGGEFGSRDERSFIFP*VRESCR Trigger: CCGACAGCTTTCCCGGACCAAGGGAAAAATGAAAGA...TCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CAA 90 bp | GCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATTCAAAGAGTACAAGTTaGTACATCTCCTGGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AFGWQRAGNLVPEMKESHSKSTS*YISWPS Trigger: GCTGGGCCAGGAGATGTACAAACTTGTACTCTTTGA...ATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CAA 90 bp | GAAGTCACTGAAGCTGAGGGGCTGAAGGTTCAGCCAGACTTATCAGGAAGTTCCGTCTCTATCTGGCGTTaGAGCTCAGAGATGAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: EVTEAEGLKVQPDLSGSSVSIWR*SSEMRR Trigger: ACGCCTCATCTCTGAGCTCAAACGCCAGATAGAGAC...GGAACTTCCTGATAAGTCTGGCTGAACCTTCAGCCCCTCAGCTTCAGTGACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145034.3 |
||
| CDS GCA 90 bp | GCACGGAATTTCTTTGTAATTATAGCCGCAGGCCTTGCATCCTTCTaGCTCCATGTTTCCCCCACACGTGATCTGACTCCACAGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ARNFFVIIAAGLASF*LHVSPTRDLTPQRD Trigger: GTCTCTCTGTGGAGTCAGATCACGTGTGGGGGAAACATGGAGGCAGAAGGATGCAAGGCCTGCGGCTATAATTACAAAGAAATTCCGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS GCA 90 bp | CAGTTTCGAAGGTGGGATCAGGAAGATACTGTAAAGCACGGGAACTaGAGAGATCGCCAGACCCACAAGGAGAACCAGGGGGAAAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QFRRWDQEDTVKHGN*RDRQTHKENQGEKE Trigger: TTCTTTTTCCCCCTGGTTCTCCTTGTGGGTCTGGCGATCTCTGCAGTTCCCGTGCTTTACAGTATCTTCCTGATCCCACCTTCGAAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGAGGGTGAGATTCCATTaGTGCAGTTTCTGCAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SVAFGWQRAGNLVPEMKERVRFH*CSFCKG Trigger: GCCTTTGCAGAAACTGCACAAATGGAATCTCACCCT...CTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038743.15 |
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| CDS-3UTR CAA 90 bp | GCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATGGAGGCAGCACAAAGTaGAACAGAGAAATGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: AFGWQRAGNLVPEMKESHGGSTK*NREMKM Trigger: CATCTTCATTTCTCTGTTCAACTTTGTGCTGCCTCC...ATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CAA 90 bp | CGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTGGAGGCAGCACAAAGTaGAACAGAGAAATGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RVAEGGEFGSRDERVPSLGGSTK*NREMKM Trigger: CATCTTCATTTCTCTGTTCAACTTTGTGCTGCCTCC...AAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CAA 90 bp | ATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCATCAAAGAGTACAAGTTaGTACATCTCCTGGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IRVAEGGEFGSRDERVPSSKSTS*YISWPS Trigger: GCTGGGCCAGGAGATGTACAAACTTGTACTCTTTGA...TGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CAA 90 bp | AGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCAAGGAACTTAGCAGTGTaGATCAAAGGCAGTAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SIRVAEGGEFGSRDERVPRNLAV*IKGSKG Trigger: CCCTTTACTGCCTTTGATCAACACTGCTAAGTTCCT...TGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS TCA 90 bp | GAAAAAGAAGTTTGCCGTGGATGCTCGGAAGGTGCGGGAAGCCGGTaGGTAGATGGAGAAGAGGGTTATCTTCTTCAGGCAGAACAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: EKEVCRGCSEGAGSR*VDGEEGYLLQAEQY Trigger: ATACTGTTCTGCCTGAAGAAGATAACCCTCTTCTCCATCTACTCACCGGCTTCCCGCACCTTCCGAGCATCCACGGCAAACTTCTTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CAA 90 bp | ATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCAAGGAACTTAGCAGTGTaGATCAAAGGCAGTAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: IRVAEGGEFGSRDERVPSRNLAV*IKGSKG Trigger: CCCTTTACTGCCTTTGATCAACACTGCTAAGTTCCT...TGATGGGACTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS-3UTR CAA 90 bp | AGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGAAAGAGCCAGGGCTGTATAGTTaGAAAGCCTTCTTTCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: SVAFGWQRAGNLVPEMKEPGLYS*KAFFHF Trigger: AAAATGAAAGAAGGCTTTCAAACTATACAGCCCTGG...CTCTTTCATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CAA 90 bp | ATTGAGAGTGTAGCATTCGGGTGGCAGAGGGCGGGGAATTTGGTTCCAGAGATGCCAGGGCTGTATAGTTaGAAAGCCTTCTTTCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: IESVAFGWQRAGNLVPEMPGLYS*KAFFHF Trigger: AAAATGAAAGAAGGCTTTCAAACTATACAGCCCTGG...CATCTCTGGAACCAAATTCCCCGCCCTCTGCCACCCGAATGCTACACTCTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS-3UTR CAA 90 bp | GGGGAATTTGGTTCCAGAGATGAAAGAGTCCCATCACTTGATATGAAGTCACTGAGGAAGTTCCATTCCTaGAGCTCAGAGCCACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GEFGSRDERVPSLDMKSLRKFHS*SSEPQL Trigger: GAGCTGTGGCTCTGAGCTCAAGGAATGGAACTTCCT...CAGTGACTTCATATCAAGTGATGGGACTCTTTCATCTCTGGAACCAAATTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS GCA 72 bp | AGAAGCCAGCTGCCCTGTAGCCTGGCTCTTCCTGTGTaGCCGCCTTGCCTGCATAGGCCAGGGAAGTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSQLPCSLALPV*PPCLHRPGKFP Trigger: CGGGAACTTCCCTGGCCTATGCAGGCAAGGCGGGCACACAGGAAGAGCCAGGCTACAGGGCAGCTGGCTTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS CCA 72 bp | CAAGGGGCGTCTCCTGTAGTGTCAAGGTGTACTCGGTaGCCCAGTAGATGCCATAGAAGGCCGCCCCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QGASPVVSRCTR*PSRCHRRPPRA Trigger: TGCTCGGGGCGGCCTTCTATGGCATCTACTGGGCCACCGAGTACACCTTGACACTACAGGAGACGCCCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS TCA 72 bp | CTGCTTCCTCTAGGTCCACCTGTAGTTCATACAAAATaGTGCGCTGGCGCAGCCGCACGTGCACGTCCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LLPLGPPVVHTK*CAGAAARARPR Trigger: GCGGGGACGTGCACGTGCGGCTGCGCCAGCGCATCATTTTGTATGAACTACAGGTGGACCTAGAGGAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS CCA 72 bp | TCTAGGTCCACCTGTAGTTCATACAAAATGATGCGCTaGCGCAGCCGCACGTGCACGTCCCCGCAGAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SRSTCSSYKMMR*RSRTCTSPQRP Trigger: TGGCCTCTGCGGGGACGTGCACGTGCGGCTGCGCCAGCGCATCATTTTGTATGAACTACAGGTGGACCTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS CCA 72 bp | CCACAAGGAGAACCAGGGGGAAAAAGAAGTTTGCCGTaGATGCTCGGAAGGTGCGGGAAGCCGGTGAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: PQGEPGGKRSLP*MLGRCGKPVSR Trigger: TCTACTCACCGGCTTCCCGCACCTTCCGAGCATCCACGGCAAACTTCTTTTTCCCCCTGGTTCTCCTTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS TCA 72 bp | CACGTGCACGTCCCCGCAGAGGCCAAAATTCCAAGCTaGGAACACTCGGTGACTGTAGCTGGTCAGAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: HVHVPAEAKIPS*EHSVTVAGQNV Trigger: GACATTCTGACCAGCTACAGTCACCGAGTGTTCTCAGCTTGGAATTTTGGCCTCTGCGGGGACGTGCACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS GCA 72 bp | CCAGGGAAGTTCCCGGGAAGGGTGAGATTCCATTTGTaGAGTTTCTGCAAAGGCCTGAAGGCTCCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PGKFPGRVRFHL*SFCKGLKAPSS Trigger: GGAGGAAGGAGCCTTCAGGCCTTTGCAGAAACTGCACAAATGGAATCTCACCCTTCCCGGGAACTTCCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038743.15 |
||
| CDS GCA 72 bp | AGGTGGGATCAGGAAGATACTGTAAAGCACGGGAACTaGAGAGATCGCCAGACCCACAAGGAGAACCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RWDQEDTVKHGN*RDRQTHKENQG Trigger: CCCCTGGTTCTCCTTGTGGGTCTGGCGATCTCTGCAGTTCCCGTGCTTTACAGTATCTTCCTGATCCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS CCA 72 bp | CCAGGACAGAGGCCACAGAGTATCTTCCTAGGAAACTaGACCAACAGCGTGACCAACAGGCCCATCAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGQRPQSIFLGN*TNSVTNRPISR Trigger: TCTGCTGATGGGCCTGTTGGTCACGCTGTTGGTCCAGTTTCCTAGGAAGATACTCTGTGGCCTCTGTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS CAA 72 bp | AGGCCAGGGAAGTTCCCGGGAAGGGTGAGATTCCATTaGTGCAGTTTCTGCAAAGGCCTGAAGGCTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RPGKFPGRVRFH*CSFCKGLKAPS Trigger: GGAAGGAGCCTTCAGGCCTTTGCAGAAACTGCACAAATGGAATCTCACCCTTCCCGGGAACTTCCCTGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038743.15 |
||
| CDS CAA 90 bp | TGCCTGCATAGGCCAGGGAAGTTCCCGGGAAGGGTGAGATTCCATTaGTGCAGTTTCTGCAAAGGCCTGAAGGCTCCTTCCTCCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: CLHRPGKFPGRVRFH*CSFCKGLKAPSSFI Trigger: GATGAAGGAGGAAGGAGCCTTCAGGCCTTTGCAGAAACTGCACAAATGGAATCTCACCCTTCCCGGGAACTTCCCTGGCCTATGCAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038743.15 |
||
| CDS CAA 72 bp | ACCAACAGGCCCATCAGCAGATCAAAGAGTACAAGTTaGTACATCTCCTGGCCCAGCCGAGTCTCCCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TNRPISRSKSTS*YISWPSRVSQH Trigger: GTGCTGGGAGACTCGGCTGGGCCAGGAGATGTACAAACTTGTACTCTTTGATCTGCTGATGGGCCTGTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS CCA 72 bp | TGGATGCTCGGAAGGTGCGGGAAGCCGGTGAGTAGATaGAGAAGAGGGTTATCTTCTTCAGGCAGAACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: WMLGRCGKPVSR*RRGLSSSGRTV Trigger: TACTGTTCTGCCTGAAGAAGATAACCCTCTTCTCCATCTACTCACCGGCTTCCCGCACCTTCCGAGCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS CAA 90 bp | AACAGCGTGACCAACAGGCCCATCAGCAGATCAAAGAGTACAAGTTaGTACATCTCCTGGCCCAGCCGAGTCTCCCAGCACGGAATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: NSVTNRPISRSKSTS*YISWPSRVSQHGIS Trigger: AGAAATTCCGTGCTGGGAGACTCGGCTGGGCCAGGAGATGTACAAACTTGTACTCTTTGATCTGCTGATGGGCCTGTTGGTCACGCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
||
| CDS GCA 72 bp | TTCCCGGGAAGGGTGAGATTCCATTTGTGCAGTTTCTaGAAAGGCCTGAAGGCTCCTTCCTCCTTCATCATC | + |
|
Preference number: 6 (lower is better) Translates to: FPGRVRFHLCSF*KGLKAPSSFII Trigger: GATGATGAAGGAGGAAGGAGCCTTCAGGCCTTTGCAGAAACTGCACAAATGGAATCTCACCCTTCCCGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038743.15 |
||
| CDS CCA 72 bp | CAAAATTCCAAGCTGAGAACACTCGGTGACTGTAGCTaGTCAGAATGTCTGACTCCGCCAACAGTGTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: QNSKLRTLGDCS*SECLTPPTVSP Trigger: AGGAGACACTGTTGGCGGAGTCAGACATTCTGACCAGCTACAGTCACCGAGTGTTCTCAGCTTGGAATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS CAA 90 bp | AGGGTTATCTTCTTCAGGCAGAACAGTATGAGGAACTTAGCAGTGTaGATCAAAGGCAGTAAAGGGCAGAAGAAGCTTCCCACCCAGACC | + |
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Preference number: 6 (lower is better) Translates to: RVIFFRQNSMRNLAV*IKGSKGQKKLPTQT Trigger: GGTCTGGGTGGGAAGCTTCTTCTGCCCTTTACTGCCTTTGATCAACACTGCTAAGTTCCTCATACTGTTCTGCCTGAAGAAGATAACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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| CDS CAA 72 bp | GATGCTAGAGAGGATCAGAAGAGGTACAGTAAAAGCTaGGGTTCCCAGAAAGTAGAGAAAATTCTGGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: DAREDQKRYSKS*GSQKVEKILGS Trigger: ACTGCCCAGAATTTTCTCTACTTTCTGGGAACCCAAGCTTTTACTGTACCTCTTCTGATCCTCTCTAGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038743.15 ENSMUST00000121743.2 |
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