RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMC3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038540

Ensembl transcript IDs: ENSMUST00000039317.14, ENSMUST00000164944.2

Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCATGTCCCAGGGAACTCCAGGCCTCAGTCCTAACCCCAGAACCTaGGATAGGCCTCCTCACTGTGGCACTGCTGTGGGTACCTCTGTC +
Preference number: 1 (lower is better)
Translates to: SMSQGTPGLSPNPRT*DRPPHCGTAVGTSV
Trigger: GACAGAGGTACCCACAGCAGTGCCACAGTGAGGAGGCCTATCCCAGGTTCTGGGGTTAGGACTGAGGCCTGGAGTTCCCTGGGACATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR TCA 90 bp CTGACCAAGAAGCACATGAGACTGGAAGAGGGCTTGGGGCCTCTGTaGGATGTCAACCTCGACTGTTGCCTCAGCCGCTGCCTGGTGAGA +
Preference number: 1 (lower is better)
Translates to: LTKKHMRLEEGLGPL*DVNLDCCLSRCLVR
Trigger: TCTCACCAGGCAGCGGCTGAGGCAACAGTCGAGGTTGACATCTCACAGAGGCCCCAAGCCCTCTTCCAGTCTCATGTGCTTCTTGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 90 bp CTAACCCCAGAACCTGGGATAGGCCTCCTCACTGTGGCACTGCTGTaGGTACCTCTGTCACTAAAGGACATTCCAGGCACTGCAGAACCA +
Preference number: 1 (lower is better)
Translates to: LTPEPGIGLLTVALL*VPLSLKDIPGTAEP
Trigger: TGGTTCTGCAGTGCCTGGAATGTCCTTTAGTGACAGAGGTACCCACAGCAGTGCCACAGTGAGGAGGCCTATCCCAGGTTCTGGGGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR GCA 90 bp CAGTCTGGCACTAGGGTTACCACAAGTTTGTACAGACTGTACCTCTaGAAGGACATCTGTCTGGCCTTGGGATGGTGCCACCCTTGCTGC +
Preference number: 1 (lower is better)
Translates to: QSGTRVTTSLYRLYL*KDICLALGWCHPCC
Trigger: GCAGCAAGGGTGGCACCATCCCAAGGCCAGACAGATGTCCTTGCAGAGGTACAGTCTGTACAAACTTGTGGTAACCCTAGTGCCAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 90 bp GACAGGTGGTCTTGGGGACGTTTGAACCTCAGTTCCAGCGGAGCATaGTACCAAGTCTCAATTCCCATCCTTCCCAGTGAACCAGGAAAG +
Preference number: 1 (lower is better)
Translates to: DRWSWGRLNLSSSGA*YQVSIPILPSEPGK
Trigger: CTTTCCTGGTTCACTGGGAAGGATGGGAATTGAGACTTGGTACCATGCTCCGCTGGAACTGAGGTTCAAACGTCCCCAAGACCACCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 90 bp CAAGTTTGTACAGACTGTACCTCTGCAAGGACATCTGTCTGGCCTTaGGATGGTGCCACCCTTGCTGCTGATCTCACTAACACGGAGAGC +
Preference number: 1 (lower is better)
Translates to: QVCTDCTSARTSVWP*DGATLAADLTNTES
Trigger: GCTCTCCGTGTTAGTGAGATCAGCAGCAAGGGTGGCACCATCCCAAGGCCAGACAGATGTCCTTGCAGAGGTACAGTCTGTACAAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR TCA 90 bp CCCAGGTTTGCTCATGCTCTCTCCTCTCCTTGTAGCACAGGTTGCTaGTCCTGCCTGTGTCTGGAAATAGGTTTGGCTTCCCTAACCTAC +
Preference number: 1 (lower is better)
Translates to: PRFAHALSSPCSTGC*SCLCLEIGLASLTY
Trigger: GTAGGTTAGGGAAGCCAAACCTATTTCCAGACACAGGCAGGATCAGCAACCTGTGCTACAAGGAGAGGAGAGAGCATGAGCAAACCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 90 bp GTGGCAGGCCTCCAAGAGTCCTGCCTCTTTGGGATGGATGGCTTGTaGAATGTCCTGGACAGTATGAAATTTCACCCTATGGTGGGGTTA +
Preference number: 1 (lower is better)
Translates to: VAGLQESCLFGMDGL*NVLDSMKFHPMVGL
Trigger: TAACCCCACCATAGGGTGAAATTTCATACTGTCCAGGACATTCCACAAGCCATCCATCCCAAAGAGGCAGGACTCTTGGAGGCCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 90 bp GCAAACACAGAATCAGAGCTGAGAGGTGAAAAAGACAGGTGGTCTTaGGGACGTTTGAACCTCAGTTCCAGCGGAGCATGGTACCAAGTC +
Preference number: 1 (lower is better)
Translates to: ANTESELRGEKDRWS*GRLNLSSSGAWYQV
Trigger: GACTTGGTACCATGCTCCGCTGGAACTGAGGTTCAAACGTCCCCAAGACCACCTGTCTTTTTCACCTCTCAGCTCTGATTCTGTGTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 90 bp TTACCACAAGTTTGTACAGACTGTACCTCTGCAAGGACATCTGTCTaGCCTTGGGATGGTGCCACCCTTGCTGCTGATCTCACTAACACG +
Preference number: 1 (lower is better)
Translates to: LPQVCTDCTSARTSV*PWDGATLAADLTNT
Trigger: CGTGTTAGTGAGATCAGCAGCAAGGGTGGCACCATCCCAAGGCCAGACAGATGTCCTTGCAGAGGTACAGTCTGTACAAACTTGTGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR GCA 90 bp CATCTAGCAAGGTATTACGTATTTGTGGCAGGCCTCCAAGAGTCCTaGCTCTTTGGGATGGATGGCTTGTGGAATGTCCTGGACAGTATG +
Preference number: 1 (lower is better)
Translates to: HLARYYVFVAGLQES*LFGMDGLWNVLDSM
Trigger: CATACTGTCCAGGACATTCCACAAGCCATCCATCCCAAAGAGGCAGGACTCTTGGAGGCCTGCCACAAATACGTAATACCTTGCTAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 90 bp AGCAGGGAGTTTGGTGCACATGGACCTGAAAACAGAAGATCTGCCTaGAATCTCAGTCTGGCACTAGGGTTACCACAAGTTTGTACAGAC +
Preference number: 1 (lower is better)
Translates to: SREFGAHGPENRRSA*NLSLALGLPQVCTD
Trigger: GTCTGTACAAACTTGTGGTAACCCTAGTGCCAGACTGAGATTCCAGGCAGATCTTCTGTTTTCAGGTCCATGTGCACCAAACTCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR TCA 90 bp GGACCCAGCCAGCCGTGCCTACACTCCCAACAAGTGTGCATTCTCTaGAGCCACTTAGTTTGTAATTATGGTGTGAAAGTCACAAGAATC +
Preference number: 1 (lower is better)
Translates to: GPSQPCLHSQQVCIL*SHLVCNYGVKVTRI
Trigger: GATTCTTGTGACTTTCACACCATAATTACAAACTAAGTGGCTTCAGAGAATGCACACTTGTTGGGAGTGTAGGCACGGCTGGCTGGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR TCA 90 bp AGCCAACTTCTAGGAATCAGGAAGAAGGGTTTTCAGCTTGTAAAGTaGGGACCCATATTATCCCTCCTAATAGGGACTGGAAACCGAATA +
Preference number: 1 (lower is better)
Translates to: SQLLGIRKKGFQLVK*GPILSLLIGTGNRI
Trigger: TATTCGGTTTCCAGTCCCTATTAGGAGGGATAATATGGGTCCTCACTTTACAAGCTGAAAACCCTTCTTCCTGATTCCTAGAAGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR GCA 90 bp ACTCATCCTCCTGAGTTCTGTGAGGGAGATTATCTGTGTGGACTTTaGAAATACCAATCTTTACACAAACCTTCTTGGTTCGCATTGGGA +
Preference number: 1 (lower is better)
Translates to: THPPEFCEGDYLCGL*KYQSLHKPSWFALG
Trigger: TCCCAATGCGAACCAAGAAGGTTTGTGTAAAGATTGGTATTTGCAAAGTCCACACAGATAATCTCCCTCACAGAACTCAGGAGGATGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR GCA 90 bp ATTTTTCTAAGTTGGAATCATCTAATACAAGGTACCATATATTCATaGCCCAAACTCACACGTCAGCCCTGGCTGTGTTATGGGATGCCT +
Preference number: 1 (lower is better)
Translates to: IFLSWNHLIQGTIYS*PKLTRQPWLCYGMP
Trigger: AGGCATCCCATAACACAGCCAGGGCTGACGTGTGAGTTTGGGGCATGAATATATGGTACCTTGTATTAGATGATTCCAACTTAGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CCA 90 bp GCCTCTGTGAGATGTCAACCTCGACTGTTGCCTCAGCCGCTGCCTGGTGAGACCTGTGGGCTCGTTAGGTaGAGGCTACAGGCCTGGCAT +
Preference number: 2 (lower is better)
Translates to: ASVRCQPRLLPQPLPGETCGLVR*RLQAWH
Trigger: ATGCCAGGCCTGTAGCCTCCACCTAACGAGCCCACA...GGTCTCACCAGGCAGCGGCTGAGGCAACAGTCGAGGTTGACATCTCACAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR GCA 90 bp TCTGTCTGGCCTTGGGATGGTGCCACCCTTGCTGCTGATCTCACTAACACGGAGCCACCCGATTTTGGGTaGTCACTATGGAGTGCTGAT +
Preference number: 2 (lower is better)
Translates to: SVWPWDGATLAADLTNTEPPDFG*SLWSAD
Trigger: ATCAGCACTCCATAGTGAGCACCCAAAATCGGGTGG...CTCCGTGTTAGTGAGATCAGCAGCAAGGGTGGCACCATCCCAAGGCCAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CCA 90 bp AGACTGTACCTCTGCAAGGACATCTGTCTGGCCTTGGGATGGTGCCACCCTTGCCTCTTACAGAAAGGGTaGGACCATGTGCCCTCAATA +
Preference number: 2 (lower is better)
Translates to: RLYLCKDICLALGWCHPCLLQKG*DHVPSI
Trigger: TATTGAGGGCACATGGTCCCACCCTTTCTGTAAGAG...GCAAGGGTGGCACCATCCCAAGGCCAGACAGATGTCCTTGCAGAGGTACAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CCA 90 bp AGACTGTACCTCTGCAAGGACATCTGTCTGGCCTTGGGATGGTGCCACCCTTGCGGGAATGTAGAACCATaGTGCCACTTTTGTCCCAGA +
Preference number: 2 (lower is better)
Translates to: RLYLCKDICLALGWCHPCGNVEP*CHFCPR
Trigger: TCTGGGACAAAAGTGGCACCATGGTTCTACATTCCC...GCAAGGGTGGCACCATCCCAAGGCCAGACAGATGTCCTTGCAGAGGTACAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR TCA 90 bp TGCCTGTGTCTGGAAATAGGTTTGGCTTCCCTAACCTACTTCCATGTCCCAGGGACCTTCTACCTGAAGTaGAGTCCTTTGGCACAGGGG +
Preference number: 2 (lower is better)
Translates to: CLCLEIGLASLTYFHVPGTFYLK*SPLAQG
Trigger: CCCCTGTGCCAAAGGACTTCACTTCAGGTAGAAGGT...CCCTGGGACATGGAAGTAGGTTAGGGAAGCCAAACCTATTTCCAGACACAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR GCA 90 bp TCTGTCTGGCCTTGGGATGGTGCCACCCTTGCTGCTGATCTCACTAACACGGAGGGGGGAAACAAGATCTaGAAACACAGAATCAGAGCT +
Preference number: 2 (lower is better)
Translates to: SVWPWDGATLAADLTNTEGGNKI*KHRIRA
Trigger: AGCTCTGATTCTGTGTTTGCAGATCTTGTTTCCCCC...CTCCGTGTTAGTGAGATCAGCAGCAAGGGTGGCACCATCCCAAGGCCAGACAGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CCA 90 bp TGTGTCAGTTACTGGGAATGTAGAACCATGGTGCCACTTTTGTCCCAGATGTTCCTGGTTACCGTGGGGTaGAGCACACACAGCTGCCCT +
Preference number: 2 (lower is better)
Translates to: CVSYWECRTMVPLLSQMFLVTVG*STHSCP
Trigger: AGGGCAGCTGTGTGTGCTCCACCCCACGGTAACCAG...GAACATCTGGGACAAAAGTGGCACCATGGTTCTACATTCCCAGTAACTGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CCA 90 bp TTCCCTAACCTACTTCCATGTCCCAGGGAACTCCAGGCCTCAGTCCTAACCCCATGTGAGAAGACACAGTaGGAAGCAGATAATGTCAGC +
Preference number: 2 (lower is better)
Translates to: FPNLLPCPRELQASVLTPCEKTQ*EADNVS
Trigger: GCTGACATTATCTGCTTCCCACTGTGTCTTCTCACA...TGGGGTTAGGACTGAGGCCTGGAGTTCCCTGGGACATGGAAGTAGGTTAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CCA 90 bp TCTGTCTGGCCTTGGGATGGTGCCACCCTTGCTGCTGATCTCACTAACACGGAGACCATTCCTTTACTCTaGATGCTACATGGGTTCATG +
Preference number: 2 (lower is better)
Translates to: SVWPWDGATLAADLTNTETIPLL*MLHGFM
Trigger: CATGAACCCATGTAGCATCCAGAGTAAAGGAATGGT...CTCCGTGTTAGTGAGATCAGCAGCAAGGGTGGCACCATCCCAAGGCCAGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CCA 90 bp TTCCCTAACCTACTTCCATGTCCCAGGGAACTCCAGGCCTCAGTCCTAACCCCAAACAGAAGATCTGCCTaGAATCTCAGTCTGGCACTA +
Preference number: 2 (lower is better)
Translates to: FPNLLPCPRELQASVLTPNRRSA*NLSLAL
Trigger: TAGTGCCAGACTGAGATTCCAGGCAGATCTTCTGTT...TGGGGTTAGGACTGAGGCCTGGAGTTCCCTGGGACATGGAAGTAGGTTAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR GCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCTGGAGCACACACAGCTaGCCTTCACAGGGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPWSTHS*PSQGLS
Trigger: TGACAGGCCCTGTGAAGGGCAGCTGTGTGTGCTCCA...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CAA 90 bp TGGCTGTGTTATGGGATGCCTCTGTTTTCTTATAATGCCCCAGGTTaGCTCATGCTCTCTCCTCTCCTTGTAGCACAGGTTGCTGATCCT +
Preference number: 2 (lower is better)
Translates to: WLCYGMPLFSYNAPG*LMLSPLLVAQVADP
Trigger: AGGATCAGCAACCTGTGCTACAAGGAGAGGAGAGAGCATGAGCAAACCTGGGGCATTATAAGAAAACAGAGGCATCCCATAACACAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR TCA 90 bp TGCCTGTGTCTGGAAATAGGTTTGGCTTCCCTAACCTACTTCCATGTCCCAGGGCACGCCTCATTGCTTTaGATAGGAAATTACAGCCCT +
Preference number: 2 (lower is better)
Translates to: CLCLEIGLASLTYFHVPGHASLL*IGNYSP
Trigger: AGGGCTGTAATTTCCTATTCAAAGCAATGAGGCGTG...CCCTGGGACATGGAAGTAGGTTAGGGAAGCCAAACCTATTTCCAGACACAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR TCA 90 bp CCCTGGCTGTGTTATGGGATGCCTCTGTTTTCTTATAATGCCCCAGGTTTGCTCATCAGAGCTGAGAGGTaGAAAAGACAGGTGGTCTTG +
Preference number: 2 (lower is better)
Translates to: PWLCYGMPLFSYNAPGLLIRAER*KRQVVL
Trigger: CAAGACCACCTGTCTTTTTCACCTCTCAGCTCTGAT...GAGCAAACCTGGGGCATTATAAGAAAACAGAGGCATCCCATAACACAGCCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR TCA 90 bp TGCCTGTGTCTGGAAATAGGTTTGGCTTCCCTAACCTACTTCCATGTCCCAGGGCATCAATGGTCAATGTaGTGCTCTCTGTTTCCAAAG +
Preference number: 2 (lower is better)
Translates to: CLCLEIGLASLTYFHVPGHQWSM*CSLFPK
Trigger: CTTTGGAAACAGAGAGCATCACATTGACCATTGATG...CCCTGGGACATGGAAGTAGGTTAGGGAAGCCAAACCTATTTCCAGACACAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR TCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCAAGAACAACTCCTTGTaGGAAGACACAGTGGGAAGC +
Preference number: 2 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPKNNSL*EDTVGS
Trigger: GCTTCCCACTGTGTCTTCTCACAAGGAGTTGTTCTT...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CCA 90 bp TCAATTCCCATCCTTCCCAGTGAACCAGGAAAGCCCAGCTATAAACTTGGGATCCATGAACACCCTGAATaGAATCAAAGGCCTGTCATT +
Preference number: 2 (lower is better)
Translates to: SIPILPSEPGKPSYKLGIHEHPE*NQRPVI
Trigger: AATGACAGGCCTTTGATTCCATTCAGGGTGTTCATG...GATCCCAAGTTTATAGCTGGGCTTTCCTGGTTCACTGGGAAGGATGGGAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR GCA 90 bp TCCTTTACTCTGGATGCTACATGGGTTCATGGCTTACCAGACCATGGTATCATCAATGTAGAACCATGGTaGCACTTTTGTCCCAGATGT +
Preference number: 2 (lower is better)
Translates to: SFTLDATWVHGLPDHGIINVEPW*HFCPRC
Trigger: ACATCTGGGACAAAAGTGGCACCATGGTTCTACATT...GATGATACCATGGTCTGGTAAGCCATGAACCCATGTAGCATCCAGAGTAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CCA 90 bp TTCAATGTGTGGAGGGTCCCCATTGTTATTCTAATTGACAGCAGTGACAGGAAAAAAGACAGGTGGTCTTaGGGACGTTTGAACCTCAGT +
Preference number: 2 (lower is better)
Translates to: FNVWRVPIVILIDSSDRKKDRWS*GRLNLS
Trigger: ACTGAGGTTCAAACGTCCCCAAGACCACCTGTCTTT...TTTCCTGTCACTGCTGTCAATTAGAATAACAATGGGGACCCTCCACACATTGAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR TCA 90 bp TTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCAAGGCCTGTCATTTTCTTaGAATGACAGCCTGATATGG +
Preference number: 2 (lower is better)
Translates to: LGAHYGVLICVCQKTIVQGLSFS*NDSLIW
Trigger: CCATATCAGGCTGTCATTTCAAGAAAATGACAGGCC...TTGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CAA 90 bp GGACTTTGCAAATACCAATCTTTACACAAACCTTCTTGGTTCGCATaGGGAGTTATCTTAGCCTCTAATCGCATGTGGCCTTACCATATG +
Preference number: 2 (lower is better)
Translates to: GLCKYQSLHKPSWFA*GVILASNRMWPYHM
Trigger: CATATGGTAAGGCCACATGCGATTAGAGGCTAAGATAACTCCCAATGCGAACCAAGAAGGTTTGTGTAAAGATTGGTATTTGCAAAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR TCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCAATGTAAATAAACACTaGGAATGGTCATGCACGCCT +
Preference number: 2 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPNVNKH*EWSCTP
Trigger: AGGCGTGCATGACCATTCTCAGTGTTTATTTACATT...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CCA 90 bp AATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCTTTGGGTGCTCACTATaGAGTGCTGATATGTGTATG +
Preference number: 2 (lower is better)
Translates to: NGQCDALCFQRNSMCGGSFGCSL*SADMCM
Trigger: CATACACATATCAGCACTCCATAGTGAGCACCCAAA...GGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR TCA 72 bp ATGTCAACCTCGACTGTTGCCTCAGCCGCTGCCTGGTaGGACCGGGAGAAGAGGACCCAGCCAGCCGTGCCT +
Preference number: 3 (lower is better)
Translates to: MSTSTVASAAAW*DREKRTQPAVP
Trigger: AGGCACGGCTGGCTGGGTCCTCTTCTCCCGGTCTCACCAGGCAGCGGCTGAGGCAACAGTCGAGGTTGACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR GCA 72 bp ACCAAGCTGGTTACCGTGGGGTGGAGCACACACAGCTaGCCTTCACAGGGCCTGTCAGGGGAGCCAAAGAAC +
Preference number: 3 (lower is better)
Translates to: TKLVTVGWSTHS*PSQGLSGEPKN
Trigger: GTTCTTTGGCTCCCCTGACAGGCCCTGTGAAGGGCAGCTGTGTGTGCTCCACCCCACGGTAACCAGCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR TCA 72 bp AAGCACATGAGACTGGAAGAGGGCTTGGGGCCTCTGTaGGATGTCAACCTCGACTGTTGCCTCAGCCGCTGC +
Preference number: 3 (lower is better)
Translates to: KHMRLEEGLGPL*DVNLDCCLSRC
Trigger: GCAGCGGCTGAGGCAACAGTCGAGGTTGACATCTCACAGAGGCCCCAAGCCCTCTTCCAGTCTCATGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 72 bp AATAGGAGTCAAGGCACCAAGCTGGTTACCGTGGGGTaGAGCACACACAGCTGCCCTTCACAGGGCCTGTCA +
Preference number: 3 (lower is better)
Translates to: NRSQGTKLVTVG*STHSCPSQGLS
Trigger: TGACAGGCCCTGTGAAGGGCAGCTGTGTGTGCTCCACCCCACGGTAACCAGCTTGGTGCCTTGACTCCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 72 bp ATGAAAATAGGAGTCAAGGCACCAAGCTGGTTACCGTaGGGTGGAGCACACACAGCTGCCCTTCACAGGGCC +
Preference number: 3 (lower is better)
Translates to: MKIGVKAPSWLP*GGAHTAALHRA
Trigger: GGCCCTGTGAAGGGCAGCTGTGTGTGCTCCACCCCACGGTAACCAGCTTGGTGCCTTGACTCCTATTTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 72 bp GAACCTGGGATAGGCCTCCTCACTGTGGCACTGCTGTaGGTACCTCTGTCACTAAAGGACATTCCAGGCACT +
Preference number: 3 (lower is better)
Translates to: EPGIGLLTVALL*VPLSLKDIPGT
Trigger: AGTGCCTGGAATGTCCTTTAGTGACAGAGGTACCCACAGCAGTGCCACAGTGAGGAGGCCTATCCCAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CAA 90 bp TGCCTGTGTCTGGAAATAGGTTTGGCTTCCCTAACCTACTTCCATGTCCCAGGGTGGTCTTGGGGACGTTaGAACCTCAGTTCCAGCGGA +
Preference number: 3 (lower is better)
Translates to: CLCLEIGLASLTYFHVPGWSWGR*NLSSSG
Trigger: TCCGCTGGAACTGAGGTTCAAACGTCCCCAAGACCA...CCCTGGGACATGGAAGTAGGTTAGGGAAGCCAAACCTATTTCCAGACACAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CAA 90 bp TTCCCTAACCTACTTCCATGTCCCAGGGAACTCCAGGCCTCAGTCCTAACCCCAAAAAGACAGGTGGTCTaGGGGACGTTTGAACCTCAG +
Preference number: 3 (lower is better)
Translates to: FPNLLPCPRELQASVLTPKRQVV*GTFEPQ
Trigger: CTGAGGTTCAAACGTCCCCAAGACCACCTGTCTTTT...TGGGGTTAGGACTGAGGCCTGGAGTTCCCTGGGACATGGAAGTAGGTTAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CAA 90 bp TCAAGGCTTGGGCATCTGACCAAGAAGCACATGAGACTGGAAGAGGGCTTGGGGTGTGAAGCAGGGAGTTaGGTGCACATGGACCTGAAA +
Preference number: 3 (lower is better)
Translates to: SRLGHLTKKHMRLEEGLGCEAGS*VHMDLK
Trigger: TTTCAGGTCCATGTGCACCAAACTCCCTGCTTCACA...CCCCAAGCCCTCTTCCAGTCTCATGTGCTTCTTGGTCAGATGCCCAAGCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR TCA 72 bp GCTCATGCTCTCTCCTCTCCTTGTAGCACAGGTTGCTaGTCCTGCCTGTGTCTGGAAATAGGTTTGGCTTCC +
Preference number: 3 (lower is better)
Translates to: AHALSSPCSTGC*SCLCLEIGLAS
Trigger: GGAAGCCAAACCTATTTCCAGACACAGGCAGGATCAGCAACCTGTGCTACAAGGAGAGGAGAGAGCATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 72 bp GAATCAGAGCTGAGAGGTGAAAAAGACAGGTGGTCTTaGGGACGTTTGAACCTCAGTTCCAGCGGAGCATGG +
Preference number: 3 (lower is better)
Translates to: ESELRGEKDRWS*GRLNLSSSGAW
Trigger: CCATGCTCCGCTGGAACTGAGGTTCAAACGTCCCCAAGACCACCTGTCTTTTTCACCTCTCAGCTCTGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR TCA 72 bp GGGATTGTGAAGCAGGGAGTTTGGTGCACATGGACCTaGAAACAGAAGATCTGCCTGGAATCTCAGTCTGGC +
Preference number: 3 (lower is better)
Translates to: GIVKQGVWCTWT*KQKICLESQSG
Trigger: GCCAGACTGAGATTCCAGGCAGATCTTCTGTTTTCAGGTCCATGTGCACCAAACTCCCTGCTTCACAATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR GCA 72 bp ACTAGGGTTACCACAAGTTTGTACAGACTGTACCTCTaGAAGGACATCTGTCTGGCCTTGGGATGGTGCCAC +
Preference number: 3 (lower is better)
Translates to: TRVTTSLYRLYL*KDICLALGWCH
Trigger: GTGGCACCATCCCAAGGCCAGACAGATGTCCTTGCAGAGGTACAGTCTGTACAAACTTGTGGTAACCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR GCA 72 bp AGGTATTACGTATTTGTGGCAGGCCTCCAAGAGTCCTaGCTCTTTGGGATGGATGGCTTGTGGAATGTCCTG +
Preference number: 3 (lower is better)
Translates to: RYYVFVAGLQES*LFGMDGLWNVL
Trigger: CAGGACATTCCACAAGCCATCCATCCCAAAGAGGCAGGACTCTTGGAGGCCTGCCACAAATACGTAATACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 72 bp GGCAGGCCTCCAAGAGTCCTGCCTCTTTGGGATGGATaGCTTGTGGAATGTCCTGGACAGTATGAAATTTCA +
Preference number: 3 (lower is better)
Translates to: GRPPRVLPLWDG*LVECPGQYEIS
Trigger: TGAAATTTCATACTGTCCAGGACATTCCACAAGCCATCCATCCCAAAGAGGCAGGACTCTTGGAGGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CAA 90 bp TGCCTGTGTCTGGAAATAGGTTTGGCTTCCCTAACCTACTTCCATGTCCCAGGGACCATGGTGCCACTTTaGTCCCAGATGTTCAGAGAA +
Preference number: 3 (lower is better)
Translates to: CLCLEIGLASLTYFHVPGTMVPL*SQMFRE
Trigger: TTCTCTGAACATCTGGGACAAAAGTGGCACCATGGT...CCCTGGGACATGGAAGTAGGTTAGGGAAGCCAAACCTATTTCCAGACACAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CAA 90 bp TCAATTCCCATCCTTCCCAGTGAACCAGGAAAGCCCAGCTATAAACTTGGGATCGATGAGATATCTGGCTaGCAGGTGAGCATGAACACC +
Preference number: 3 (lower is better)
Translates to: SIPILPSEPGKPSYKLGIDEISG*QVSMNT
Trigger: GGTGTTCATGCTCACCTGCAAGCCAGATATCTCATC...GATCCCAAGTTTATAGCTGGGCTTTCCTGGTTCACTGGGAAGGATGGGAATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 72 bp CTCCAAGAGTCCTGCCTCTTTGGGATGGATGGCTTGTaGAATGTCCTGGACAGTATGAAATTTCACCCTATG +
Preference number: 3 (lower is better)
Translates to: LQESCLFGMDGL*NVLDSMKFHPM
Trigger: CATAGGGTGAAATTTCATACTGTCCAGGACATTCCACAAGCCATCCATCCCAAAGAGGCAGGACTCTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 72 bp TTTGGTGCACATGGACCTGAAAACAGAAGATCTGCCTaGAATCTCAGTCTGGCACTAGGGTTACCACAAGTT +
Preference number: 3 (lower is better)
Translates to: FGAHGPENRRSA*NLSLALGLPQV
Trigger: AACTTGTGGTAACCCTAGTGCCAGACTGAGATTCCAGGCAGATCTTCTGTTTTCAGGTCCATGTGCACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR-3UTR CAA 90 bp TGCCTGTGTCTGGAAATAGGTTTGGCTTCCCTAACCTACTTCCATGTCCCAGGGATAGAATTTGAAAACTaGTACACTCATCCTCCTGAG +
Preference number: 3 (lower is better)
Translates to: CLCLEIGLASLTYFHVPGIEFEN*YTHPPE
Trigger: CTCAGGAGGATGAGTGTACAAGTTTTCAAATTCTAT...CCCTGGGACATGGAAGTAGGTTAGGGAAGCCAAACCTATTTCCAGACACAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR TCA 72 bp CAGCCGTGCCTACACTCCCAACAAGTGTGCATTCTCTaGAGCCACTTAGTTTGTAATTATGGTGTGAAAGTC +
Preference number: 3 (lower is better)
Translates to: QPCLHSQQVCIL*SHLVCNYGVKV
Trigger: GACTTTCACACCATAATTACAAACTAAGTGGCTTCAGAGAATGCACACTTGTTGGGAGTGTAGGCACGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR TCA 72 bp CTAGGAATCAGGAAGAAGGGTTTTCAGCTTGTAAAGTaGGGACCCATATTATCCCTCCTAATAGGGACTGGA +
Preference number: 3 (lower is better)
Translates to: LGIRKKGFQLVK*GPILSLLIGTG
Trigger: TCCAGTCCCTATTAGGAGGGATAATATGGGTCCTCACTTTACAAGCTGAAAACCCTTCTTCCTGATTCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 72 bp AAACCATTCCTTTACTCTGGATGCTACATGGGTTCATaGCTTACCAGACCATGGTATCATCAATGGTCAATG +
Preference number: 3 (lower is better)
Translates to: KPFLYSGCYMGS*LTRPWYHQWSM
Trigger: CATTGACCATTGATGATACCATGGTCTGGTAAGCCATGAACCCATGTAGCATCCAGAGTAAAGGAATGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR TCA 72 bp TGGCTTACCAGACCATGGTATCATCAATGGTCAATGTaGTGCTCTCTGTTTCCAAAGAAATTCAATGTGTGG +
Preference number: 3 (lower is better)
Translates to: WLTRPWYHQWSM*CSLFPKKFNVW
Trigger: CCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCATTGATGATACCATGGTCTGGTAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR GCA 72 bp AATATTATTAACGATGAAAAGGGTGATGACTGTTTTTaGAGTCCCGATGAGATATCTGGCTTGCAGGTGAGC +
Preference number: 3 (lower is better)
Translates to: NIINDEKGDDCF*SPDEISGLQVS
Trigger: GCTCACCTGCAAGCCAGATATCTCATCGGGACTGCAAAAACAGTCATCACCCTTTTCATCGTTAATAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CCA 72 bp GGACTTTGCAAATACCAATCTTTACACAAACCTTCTTaGTTCGCATTGGGAGTTATCTTAGCCTCTAATCGC +
Preference number: 3 (lower is better)
Translates to: GLCKYQSLHKPS*FALGVILASNR
Trigger: GCGATTAGAGGCTAAGATAACTCCCAATGCGAACCAAGAAGGTTTGTGTAAAGATTGGTATTTGCAAAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp GCCTCTGTGAGATGTCAACCTCGACTGTTGCCTCAGCCGCTGCCTGGTGAGACCCTCTGCTTCAGTGGCTaGGCCTGCCTGCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: ASVRCQPRLLPQPLPGETLCFSG*ACLPGI
Trigger: GATGCCAGGCAGGCAGGCTCAGCCACTGAAGCAGAG...GGTCTCACCAGGCAGCGGCTGAGGCAACAGTCGAGGTTGACATCTCACAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp GCCTCTGTGAGATGTCAACCTCGACTGTTGCCTCAGCCGCTGCCTGGTGAGACCCCAGCACTGGCCTTGTaGGCCCTGCATGTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: ASVRCQPRLLPQPLPGETPALAL*ALHVGH
Trigger: GTGCCCTACATGCAGGGCCCACAAGGCCAGTGCTGG...GGTCTCACCAGGCAGCGGCTGAGGCAACAGTCGAGGTTGACATCTCACAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CAA 72 bp GGGCTTGGGGCCTCTGTGAGATGTCAACCTCGACTGTaGCCTCAGCCGCTGCCTGGTGAGACCGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: GLGASVRCQPRL*PQPLPGETGRR
Trigger: TCTTCTCCCGGTCTCACCAGGCAGCGGCTGAGGCAACAGTCGAGGTTGACATCTCACAGAGGCCCCAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp GCCTCTGTGAGATGTCAACCTCGACTGTTGCCTCAGCCGCTGCCTGGTGAGACCAGCTCCTTCTTCGACTaGTCCAGCTTCTGGGACCGG +
Preference number: 4 (lower is better)
Translates to: ASVRCQPRLLPQPLPGETSSFFD*SSFWDR
Trigger: CCGGTCCCAGAAGCTGGAGCAGTCGAAGAAGGAGCT...GGTCTCACCAGGCAGCGGCTGAGGCAACAGTCGAGGTTGACATCTCACAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp GCCTCTGTGAGATGTCAACCTCGACTGTTGCCTCAGCCGCTGCCTGGTGAGACCCTCGGAAGAAGTCTATaGGGAGGATGCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: ASVRCQPRLLPQPLPGETLGRSL*GGCWPQ
Trigger: CTGTGGCCAGCATCCTCCTCATAGACTTCTTCCGAG...GGTCTCACCAGGCAGCGGCTGAGGCAACAGTCGAGGTTGACATCTCACAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp GCCTCTGTGAGATGTCAACCTCGACTGTTGCCTCAGCCGCTGCCTGGTGAGACCCGAAACACTTGCTGGTaGGGTACATTGCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ASVRCQPRLLPQPLPGETRNTCW*GTLQVS
Trigger: GCTGACCTGCAATGTACCCCACCAGCAAGTGTTTCG...GGTCTCACCAGGCAGCGGCTGAGGCAACAGTCGAGGTTGACATCTCACAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp GCCTCTGTGAGATGTCAACCTCGACTGTTGCCTCAGCCGCTGCCTGGTGAGACCTTCTTCACTCAGCTGTaGAGAGCAAGGCTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: ASVRCQPRLLPQPLPGETFFTQL*RARLVG
Trigger: CCCAACCAGCCTTGCTCTCCACAGCTGAGTGAAGAA...GGTCTCACCAGGCAGCGGCTGAGGCAACAGTCGAGGTTGACATCTCACAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TGCCTGTGTCTGGAAATAGGTTTGGCTTCCCTAACCTACTTCCATGTCCCAGGGGCTGGTGGGGTACATTaGAGGTCAGCACCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: CLCLEIGLASLTYFHVPGAGGVH*RSAPPS
Trigger: GCTGGGCGGTGCTGACCTGCAATGTACCCCACCAGC...CCCTGGGACATGGAAGTAGGTTAGGGAAGCCAAACCTATTTCCAGACACAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp TCAAGGCTTGGGCATCTGACCAAGAAGCACATGAGACTGGAAGAGGGCTTGGGGCAGGCACTGTCCTGGTaGCAGAGAAGGTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: SRLGHLTKKHMRLEEGLGQALSW*QRRWEH
Trigger: ATGCTCCCACCTTCTCTGCCACCAGGACAGTGCCTG...CCCCAAGCCCTCTTCCAGTCTCATGTGCTTCTTGGTCAGATGCCCAAGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp TTCCCTAACCTACTTCCATGTCCCAGGGAACTCCAGGCCTCAGTCCTAACCCCACTTCAGGCACTGTCCTaGTGGCAGAGAAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FPNLLPCPRELQASVLTPLQALS*WQRRWE
Trigger: CTCCCACCTTCTCTGCCACCAGGACAGTGCCTGAAG...TGGGGTTAGGACTGAGGCCTGGAGTTCCCTGGGACATGGAAGTAGGTTAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp TTCCCTAACCTACTTCCATGTCCCAGGGAACTCCAGGCCTCAGTCCTAACCCCAGCATGCTGTGGGTATTaGCCGTTCCTGGATCGTGGC +
Preference number: 4 (lower is better)
Translates to: FPNLLPCPRELQASVLTPACCGY*PFLDRG
Trigger: GCCACGATCCAGGAACGGCCAATACCCACAGCATGC...TGGGGTTAGGACTGAGGCCTGGAGTTCCCTGGGACATGGAAGTAGGTTAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp AGACTGTACCTCTGCAAGGACATCTGTCTGGCCTTGGGATGGTGCCACCCTTGCTGCCCTGGCTGGACATaGCATGCAGGTATTGGTCAT +
Preference number: 4 (lower is better)
Translates to: RLYLCKDICLALGWCHPCCPGWT*HAGIGH
Trigger: ATGACCAATACCTGCATGTCATGTCCAGCCAGGGCA...GCAAGGGTGGCACCATCCCAAGGCCAGACAGATGTCCTTGCAGAGGTACAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp AGACTGTACCTCTGCAAGGACATCTGTCTGGCCTTGGGATGGTGCCACCCTTGCCAGGACATGTACTGCTaGACATTCCTGGGGTACAGC +
Preference number: 4 (lower is better)
Translates to: RLYLCKDICLALGWCHPCQDMYC*TFLGYS
Trigger: GCTGTACCCCAGGAATGTGCAGCAGTACATGTCCTG...GCAAGGGTGGCACCATCCCAAGGCCAGACAGATGTCCTTGCAGAGGTACAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp AGACTGTACCTCTGCAAGGACATCTGTCTGGCCTTGGGATGGTGCCACCCTTGCGCTCGAAACACTTGCTaGTGGGGTACATTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RLYLCKDICLALGWCHPCARNTC*WGTLQV
Trigger: GACCTGCAATGTACCCCACCAGCAAGTGTTTCGAGC...GCAAGGGTGGCACCATCCCAAGGCCAGACAGATGTCCTTGCAGAGGTACAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp AGACTGTACCTCTGCAAGGACATCTGTCTGGCCTTGGGATGGTGCCACCCTTGCTACACTGAGGACAGCTaGCTGATAAGGTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RLYLCKDICLALGWCHPCYTEDS*LIRSLS
Trigger: GGACAGCGACCTTATCAGCCAGCTGTCCTCAGTGTA...GCAAGGGTGGCACCATCCCAAGGCCAGACAGATGTCCTTGCAGAGGTACAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp CCCTGGCTGTGTTATGGGATGCCTCTGTTTTCTTATAATGCCCCAGGTTTGCTCTCGACTCTGCTTCAGTaGCTGAGCCTGCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PWLCYGMPLFSYNAPGLLSTLLQ*LSLPAW
Trigger: CCAGGCAGGCAGGCTCAGCCACTGAAGCAGAGTCGA...GAGCAAACCTGGGGCATTATAAGAAAACAGAGGCATCCCATAACACAGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp TTCCCTAACCTACTTCCATGTCCCAGGGAACTCCAGGCCTCAGTCCTAACCCCAGGAACATGGCCTATGTaGATGCCTGTTGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: FPNLLPCPRELQASVLTPGTWPM*MPVGVL
Trigger: CAGGACACCAACAGGCATCCACATAGGCCATGTTCC...TGGGGTTAGGACTGAGGCCTGGAGTTCCCTGGGACATGGAAGTAGGTTAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp AGACTGTACCTCTGCAAGGACATCTGTCTGGCCTTGGGATGGTGCCACCCTTGCGGTATTGGCCGTTCCTaGATCGTGGCTTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: RLYLCKDICLALGWCHPCGIGRS*IVAFCV
Trigger: TACACAGAAAGCCACGATCCAGGAACGGCCAATACC...GCAAGGGTGGCACCATCCCAAGGCCAGACAGATGTCCTTGCAGAGGTACAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp AGACTGTACCTCTGCAAGGACATCTGTCTGGCCTTGGGATGGTGCCACCCTTGCTGTCTGTGTCACAGATaGGCAGGATCTGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: RLYLCKDICLALGWCHPCCLCHR*AGSVLV
Trigger: CACAAGAACAGATCCTGCTCATCTGTGACACAGACA...GCAAGGGTGGCACCATCCCAAGGCCAGACAGATGTCCTTGCAGAGGTACAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp GCCTCTGTGAGATGTCAACCTCGACTGTTGCCTCAGCCGCTGCCTGGTGAGACCCTAAAGCATCTATCTTaGAATGCCTTTCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: ASVRCQPRLLPQPLPGETLKHLS*NAFLAR
Trigger: TCTGGCCAGAAAGGCATTTCAAGATAGATGCTTTAG...GGTCTCACCAGGCAGCGGCTGAGGCAACAGTCGAGGTTGACATCTCACAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TCTGTCTGGCCTTGGGATGGTGCCACCCTTGCTGCTGATCTCACTAACACGGAGTTTGTTCCGGATCACTaGTGTCTCCCGTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: SVWPWDGATLAADLTNTEFVPDH*CLPFHQ
Trigger: CTGATGAAACGGGAGACAGCAGTGATCCGGAACAAA...CTCCGTGTTAGTGAGATCAGCAGCAAGGGTGGCACCATCCCAAGGCCAGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TCAATTCCCATCCTTCCCAGTGAACCAGGAAAGCCCAGCTATAAACTTGGGATCTCCAAAGGGCTGGCCTaGGATCAGCTCGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SIPILPSEPGKPSYKLGISKGLA*DQLGKD
Trigger: GTCCTTCCCGAGCTGATCGCAGGCCAGCCCTTTGGA...GATCCCAAGTTTATAGCTGGGCTTTCCTGGTTCACTGGGAAGGATGGGAATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp AGACTGTACCTCTGCAAGGACATCTGTCTGGCCTTGGGATGGTGCCACCCTTGCGAAAGGAGGACTGATTaGCTGAAAGTCTTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: RLYLCKDICLALGWCHPCERRTD*LKVFPG
Trigger: TCCCGGAAAGACTTTCAGCCAATCAGTCCTCCTTTC...GCAAGGGTGGCACCATCCCAAGGCCAGACAGATGTCCTTGCAGAGGTACAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CAA 72 bp CTGAGAGGTGAAAAAGACAGGTGGTCTTGGGGACGTTaGAACCTCAGTTCCAGCGGAGCATGGTACCAAGTC +
Preference number: 4 (lower is better)
Translates to: LRGEKDRWSWGR*NLSSSGAWYQV
Trigger: GACTTGGTACCATGCTCCGCTGGAACTGAGGTTCAAACGTCCCCAAGACCACCTGTCTTTTTCACCTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp TTCCCTAACCTACTTCCATGTCCCAGGGAACTCCAGGCCTCAGTCCTAACCCCACCAGGATGTTGGCAATaGTTCTCAGACAGACAGTCA +
Preference number: 4 (lower is better)
Translates to: FPNLLPCPRELQASVLTPPGCWQ*FSDRQS
Trigger: TGACTGTCTGTCTGAGAATCATTGCCAACATCCTGG...TGGGGTTAGGACTGAGGCCTGGAGTTCCCTGGGACATGGAAGTAGGTTAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp TTCCCTAACCTACTTCCATGTCCCAGGGAACTCCAGGCCTCAGTCCTAACCCCATGCAAAGGAACAACATaGACAGGAGCATTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: FPNLLPCPRELQASVLTPCKGTT*TGALPG
Trigger: ACCTGGCAATGCTCCTGTTCATGTTGTTCCTTTGCA...TGGGGTTAGGACTGAGGCCTGGAGTTCCCTGGGACATGGAAGTAGGTTAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp TCAAGGCTTGGGCATCTGACCAAGAAGCACATGAGACTGGAAGAGGGCTTGGGGACTGCTGGATGCTGCTaGCACAGAATCAGATTCTGT +
Preference number: 4 (lower is better)
Translates to: SRLGHLTKKHMRLEEGLGTAGCC*HRIRFC
Trigger: ACAGAATCTGATTCTGTGTCAGCAGCATCCAGCAGT...CCCCAAGCCCTCTTCCAGTCTCATGTGCTTCTTGGTCAGATGCCCAAGCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TCTGTCTGGCCTTGGGATGGTGCCACCCTTGCTGCTGATCTCACTAACACGGAGCATGAACAGGAGCATTaGCAGGTAGAAGTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: SVWPWDGATLAADLTNTEHEQEH*QVEVVG
Trigger: TCCAACAACTTCTACCTGGCAATGCTCCTGTTCATG...CTCCGTGTTAGTGAGATCAGCAGCAAGGGTGGCACCATCCCAAGGCCAGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp AGGAAATTACAGCCCTCGGGGTCTCAGAACCTCAGACAGCATCAATACATAAGCTATGTCTCCCAGCACTaGCCTTGTGGGCCCTGCATG +
Preference number: 4 (lower is better)
Translates to: RKLQPSGSQNLRQHQYISYVSQH*PCGPCM
Trigger: CATGCAGGGCCCACAAGGCCAGTGCTGGGAGACATA...GCTTATGTATTGATGCTGTCTGAGGTTCTGAGACCCCGAGGGCTGTAATTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp TGCCTGTGTCTGGAAATAGGTTTGGCTTCCCTAACCTACTTCCATGTCCCAGGGAGCTTCAGCATCTCCTaGCCGACATATGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CLCLEIGLASLTYFHVPGSFSIS*PTYVSQ
Trigger: CTGGGAGACATATGTCGGCCAGGAGATGCTGAAGCT...CCCTGGGACATGGAAGTAGGTTAGGGAAGCCAAACCTATTTCCAGACACAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp TCAAGGCTTGGGCATCTGACCAAGAAGCACATGAGACTGGAAGAGGGCTTGGGGACTGCTGCACATTCCTaGGGTACAGCTCTACAATGT +
Preference number: 4 (lower is better)
Translates to: SRLGHLTKKHMRLEEGLGTAAHS*GTALQC
Trigger: ACATTGTAGAGCTGTACCCCAGGAATGTGCAGCAGT...CCCCAAGCCCTCTTCCAGTCTCATGTGCTTCTTGGTCAGATGCCCAAGCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp TCCTTTACTCTGGATGCTACATGGGTTCATGGCTTACCAGACCATGGTATCATCCTGGCTGGCAGACCTTaGGAATCTGCCCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SFTLDATWVHGLPDHGIILAGRP*ESALAG
Trigger: TCCAGCCAGGGCAGATTCCCAAGGTCTGCCAGCCAG...GATGATACCATGGTCTGGTAAGCCATGAACCCATGTAGCATCCAGAGTAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp TCCTTTACTCTGGATGCTACATGGGTTCATGGCTTACCAGACCATGGTATCATCTCCTGCCCAGCTGGCTaGCAGACCTTGGGAATCTGC +
Preference number: 4 (lower is better)
Translates to: SFTLDATWVHGLPDHGIISCPAG*QTLGIC
Trigger: GCAGATTCCCAAGGTCTGCCAGCCAGCTGGGCAGGA...GATGATACCATGGTCTGGTAAGCCATGAACCCATGTAGCATCCAGAGTAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp TTCAATGTGTGGAGGGTCCCCATTGTTATTCTAATTGACAGCAGTGACAGGAAAACGGTGCTAGCATGGTaGCGAGGGAGACCACCACGC +
Preference number: 4 (lower is better)
Translates to: FNVWRVPIVILIDSSDRKTVLAW*RGRPPR
Trigger: GCGTGGTGGTCTCCCTCGTCACCATGCTAGCACCGT...TTTCCTGTCACTGCTGTCAATTAGAATAACAATGGGGACCCTCCACACATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCGAGCTCTGCTCCTGCTaGCTGGTAGCCTCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPELCSC*LVASSP
Trigger: AGGACTCGAGGCTACCAGGCAGCAGGAGCAGAGCTC...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp AATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCGTGGCTGAGCCTGCCTaGCTGGCATCGCTAGGGATG +
Preference number: 4 (lower is better)
Translates to: NGQCDALCFQRNSMCGGSVAEPA*LASLGM
Trigger: CATCCCTAGCGATGCCAGGCAGGCAGGCTCAGCCAC...GGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCAAACTTGGCCTTCCTCCTaGCCAGCTGGCTGGCAGACC +
Preference number: 4 (lower is better)
Translates to: LGAHYGVLICVCQKTIVQTWPSS*PAGWQT
Trigger: GGTCTGCCAGCCAGCTGGGCAGGAGGAAGGCCAAGT...TTGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp TCCTTTACTCTGGATGCTACATGGGTTCATGGCTTACCAGACCATGGTATCATCGTACTTCCAAAGGGCTaGCCTGCGATCAGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: SFTLDATWVHGLPDHGIIVLPKG*PAISSG
Trigger: TCCCGAGCTGATCGCAGGCCAGCCCTTTGGAAGTAC...GATGATACCATGGTCTGGTAAGCCATGAACCCATGTAGCATCCAGAGTAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp TCAAGGCTTGGGCATCTGACCAAGAAGCACATGAGACTGGAAGAGGGCTTGGGGTTCTGTGTACAAATGTaGGCCTCTCAAGCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SRLGHLTKKHMRLEEGLGFCVQM*ASQAGL
Trigger: AAGACCAGCTTGAGAGGCCCACATTTGTACACAGAA...CCCCAAGCCCTCTTCCAGTCTCATGTGCTTCTTGGTCAGATGCCCAAGCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp CTCTCTTACAGAAAGGGTGGGACCATGTGCCCTCAATATTTCCAAAGAGATCCATTCCTCCTGCCCAGCTaGCTGGCAGACCTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: LSYRKGGTMCPQYFQRDPFLLPS*LADLGN
Trigger: ATTCCCAAGGTCTGCCAGCCAGCTGGGCAGGAGGAA...TGGATCTCTTTGGAAATATTGAGGGCACATGGTCCCACCCTTTCTGTAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CAA 72 bp GGCCTCCAAGAGTCCTGCCTCTTTGGGATGGATGGCTaGTGGAATGTCCTGGACAGTATGAAATTTCACCCT +
Preference number: 4 (lower is better)
Translates to: GLQESCLFGMDG*WNVLDSMKFHP
Trigger: AGGGTGAAATTTCATACTGTCCAGGACATTCCACAAGCCATCCATCCCAAAGAGGCAGGACTCTTGGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCGCCACCTCAGGAAGATaGAGTAGGAGGCCACACCAG +
Preference number: 4 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPATSGR*SRRPHQ
Trigger: CTGGTGTGGCCTCCTACTTCATCTTCCTGAGGTGGC...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp CTCTCTTACAGAAAGGGTGGGACCATGTGCCCTCAATATTTCCAAAGAGATCCAGATGCTTCCAGCCAGTaGGAGGAGCACCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: LSYRKGGTMCPQYFQRDPDASSQ*EEHQDV
Trigger: AACATCCTGGTGCTCCTCTCACTGGCTGGAAGCATC...TGGATCTCTTTGGAAATATTGAGGGCACATGGTCCCACCCTTTCTGTAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp TGCCTGTGTCTGGAAATAGGTTTGGCTTCCCTAACCTACTTCCATGTCCCAGGGCACAGAAAGGAGGACTaGTTGGCTGAAAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: CLCLEIGLASLTYFHVPGHRKED*LAESLS
Trigger: GGAAAGACTTTCAGCCAATCAGTCCTCCTTTCTGTG...CCCTGGGACATGGAAGTAGGTTAGGGAAGCCAAACCTATTTCCAGACACAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCGCTCGAACTTGGCCTTaGCTCTGGCCTTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPARTWP*LWPSGH
Trigger: ATGCCCTGAAGGCCAGAGTCAAGGCCAAGTTCGAGC...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TTTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCAAGTGCCCGCAGTTTCTaGCCCATGGTCCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: FGCSLWSADMCMSKDHSASARSF*PMVQGL
Trigger: CAGACCCTGGACCATGGGGCAGAAACTGCGGGCACT...TGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TTTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCACCAGAGCTCTGCTCCTaGTGCCTGGTAGCCTCGAGT +
Preference number: 4 (lower is better)
Translates to: FGCSLWSADMCMSKDHSAPELCS*CLVASS
Trigger: ACTCGAGGCTACCAGGCAGCAGGAGCAGAGCTCTGG...TGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TCAAGGCTTGGGCATCTGACCAAGAAGCACATGAGACTGGAAGAGGGCTTGGGGGGTATTGGTCATTGTTaGTGTTTTGATGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: SRLGHLTKKHMRLEEGLGGIGHC*CFDGHC
Trigger: GCAGTGACCATCAAAACAGCAACAATGACCAATACC...CCCCAAGCCCTCTTCCAGTCTCATGTGCTTCTTGGTCAGATGCCCAAGCCTTGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp TTTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCATGGTGGCAGAGAAGGTaGGAGCATCTGCCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: FGCSLWSADMCMSKDHSAWWQRR*EHLPSG
Trigger: GCCACTGGGCAGATGCTCCCACCTTCTCTGCCACCA...TGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp TCAAGGCTTGGGCATCTGACCAAGAAGCACATGAGACTGGAAGAGGGCTTGGGGCATTCTCGGCAATCTTaGATTCTCCATATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SRLGHLTKKHMRLEEGLGHSRQS*ILHIQE
Trigger: TTCCTGAATATGGAGAATTCAAGATTGCCGAGAATG...CCCCAAGCCCTCTTCCAGTCTCATGTGCTTCTTGGTCAGATGCCCAAGCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TCCTTTACTCTGGATGCTACATGGGTTCATGGCTTACCAGACCATGGTATCATCTGGCGTTTCTCCGAATaGTTCTGTAGCGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: SFTLDATWVHGLPDHGIIWRFSE*FCSAGM
Trigger: CATCCCAGCGCTACAGAAGCATTCGGAGAAACGCCA...GATGATACCATGGTCTGGTAAGCCATGAACCCATGTAGCATCCAGAGTAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TTCCCTAACCTACTTCCATGTCCCAGGGAACTCCAGGCCTCAGTCCTAACCCCACTTCCTCAATGTTCATaGTGTTCACTTTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: FPNLLPCPRELQASVLTPLPQCS*CSLCPE
Trigger: TTCTGGACAAAGTGAACAGCATGAACATTGAGGAAG...TGGGGTTAGGACTGAGGCCTGGAGTTCCCTGGGACATGGAAGTAGGTTAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp AATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCTGGGTAGTACCTGCCTaGACTTGGCCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NGQCDALCFQRNSMCGGSWVVPA*TWPSSC
Trigger: GCAGGAGGAAGGCCAAGTCCAGGCAGGTACTACCCA...GGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp TCCTTTACTCTGGATGCTACATGGGTTCATGGCTTACCAGACCATGGTATCATCCCTCTGGGTTCCCAATaGGATAATCCCAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: SFTLDATWVHGLPDHGIIPLGSQ*DNPRHK
Trigger: TTTGTGCCTGGGATTATCTCATTGGGAACCCAGAGG...GATGATACCATGGTCTGGTAAGCCATGAACCCATGTAGCATCCAGAGTAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp TCAATTCCCATCCTTCCCAGTGAACCAGGAAAGCCCAGCTATAAACTTGGGATCCCACCACAAAGTAGATaGGATAGATGCTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SIPILPSEPGKPSYKLGIPPQSR*DRCFQP
Trigger: TGGCTGGAAGCATCTATCTCATCTACTTTGTGGTGG...GATCCCAAGTTTATAGCTGGGCTTTCCTGGTTCACTGGGAAGGATGGGAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCCATGGCCTATGTGGATaGCTGTTGGTGTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPHGLCG*LLVSCS
Trigger: AGAGCAGGACACCAACAGGCATCCACATAGGCCATG...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TCAATTCCCATCCTTCCCAGTGAACCAGGAAAGCCCAGCTATAAACTTGGGATCTGTTTTGATGGTCACTaGTGGATGCTGCTGACACAG +
Preference number: 4 (lower is better)
Translates to: SIPILPSEPGKPSYKLGICFDGH*WMLLTQ
Trigger: CTGTGTCAGCAGCATCCAGCAGTGACCATCAAAACA...GATCCCAAGTTTATAGCTGGGCTTTCCTGGTTCACTGGGAAGGATGGGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp AATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCGGTAGCCTCGAGTCCTaGTCAGCCTCCCTTCAAACT +
Preference number: 4 (lower is better)
Translates to: NGQCDALCFQRNSMCGGSGSLES*SASLQT
Trigger: AGTTTGAAGGGAGGCTGACCAGGACTCGAGGCTACC...GGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp TTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCAACAGAAGCAGCACAGCTaGAAGTATCACCACGGGGCT +
Preference number: 4 (lower is better)
Translates to: LGAHYGVLICVCQKTIVQQKQHS*KYHHGA
Trigger: AGCCCCGTGGTGATACTTCCAGCTGTGCTGCTTCTG...TTGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCGGAGCACGGGGACTGTaGTCATGTGTCATCAAGGTA +
Preference number: 4 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPGARGL*SCVIKV
Trigger: TACCTTGATGACACATGACCACAGTCCCCGTGCTCC...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp AGGAAATTACAGCCCTCGGGGTCTCAGAACCTCAGACAGCATCAATACATAAGCGAGAGTCTTTGGCTTTaGATTTTCACTCGACTCTGC +
Preference number: 4 (lower is better)
Translates to: RKLQPSGSQNLRQHQYISESLWL*IFTRLC
Trigger: GCAGAGTCGAGTGAAAATTCAAAGCCAAAGACTCTC...GCTTATGTATTGATGCTGTCTGAGGTTCTGAGACCCCGAGGGCTGTAATTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCTTGCTGCTTTCCTCATaGGTCTGGATTCGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPLLLSS*VWIRAW
Trigger: CCAAGCTCGAATCCAGACTCATGAGGAAAGCAGCAA...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCCTCGCATTTTGGATCTaGATCCTGAGTTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPLAFWI*ILSCWL
Trigger: CAGCCAGCAACTCAGGATGCAGATCCAAAATGCGAG...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TTTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCACAGGGACCTTGTGATTaGCTCCATCCTGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: FGCSLWSADMCMSKDHSAQGPCD*LHPEAL
Trigger: AAGAGCCTCAGGATGGAGGCAATCACAAGGTCCCTG...TGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp AATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCGGGGAATGGTCTTGCTaGCTGTACTTCCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: NGQCDALCFQRNSMCGGSGEWSC*LYFQRA
Trigger: AGCCCTTTGGAAGTACAGCCAGCAAGACCATTCCCC...GGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp TTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCAATTTCATTGGAAGCACTaGCTAGGCTGGTGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: LGAHYGVLICVCQKTIVQFHWKH*LGWCGS
Trigger: ACTCCCGCACCAGCCTAGCCAGTGCTTCCAATGAAA...TTGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp AATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCTTGTCCAGGACTCTGTaGCAGGGACCTTGTGATTGC +
Preference number: 4 (lower is better)
Translates to: NGQCDALCFQRNSMCGGSLSRTL*QGPCDC
Trigger: GCAATCACAAGGTCCCTGCCACAGAGTCCTGGACAA...GGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCCTTGAAATGCCTTTCTaGCCAGAAAGCTCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPLEMPF*PESSVG
Trigger: ACCCACCGAGCTTTCTGGCCAGAAAGGCATTTCAAG...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp AGGAAATTACAGCCCTCGGGGTCTCAGAACCTCAGACAGCATCAATACATAAGCGTGGGCCTCTCAAGCTaGTCTTCAAAACTATTATCC +
Preference number: 4 (lower is better)
Translates to: RKLQPSGSQNLRQHQYISVGLSS*SSKLLS
Trigger: GGATAATAGTTTTGAAGACCAGCTTGAGAGGCCCAC...GCTTATGTATTGATGCTGTCTGAGGTTCTGAGACCCCGAGGGCTGTAATTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CAA 72 bp AAGCAAATGAAGCATGGGGATTGTGAAGCAGGGAGTTaGGTGCACATGGACCTGAAAACAGAAGATCTGCCT +
Preference number: 4 (lower is better)
Translates to: KQMKHGDCEAGS*VHMDLKTEDLP
Trigger: AGGCAGATCTTCTGTTTTCAGGTCCATGTGCACCAAACTCCCTGCTTCACAATCCCCATGCTTCATTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp TCAATTCCCATCCTTCCCAGTGAACCAGGAAAGCCCAGCTATAAACTTGGGATCACACCAGACCCGAAGTaGCTCTCAATTTTCTTTATC +
Preference number: 4 (lower is better)
Translates to: SIPILPSEPGKPSYKLGITPDPK*LSIFFI
Trigger: GATAAAGAAAATTGAGAGTCACTTCGGGTCTGGTGT...GATCCCAAGTTTATAGCTGGGCTTTCCTGGTTCACTGGGAAGGATGGGAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp CCCTGGCTGTGTTATGGGATGCCTCTGTTTTCTTATAATGCCCCAGGTTTGCTCTCTGCAGCGGATATTTaGCATGAGATCTTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: PWLCYGMPLFSYNAPGLLSAADI*HEIFLK
Trigger: TTTCAGAAAGATCTCATGGCAAATATCCGCTGCAGA...GAGCAAACCTGGGGCATTATAAGAAAACAGAGGCATCCCATAACACAGCCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCAAAGATGGCAGCTGTTTTaGTTTCTGCAGCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LGAHYGVLICVCQKTIVQRWQLF*FLQPLG
Trigger: ACCCAGAGGCTGCAGAAAGCAAAACAGCTGCCATCT...TTGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCAAGAAGGTGGGAGCATCTaGCCAGTGGCTTGTTATGTT +
Preference number: 4 (lower is better)
Translates to: LGAHYGVLICVCQKTIVQEGGSI*PVACYV
Trigger: AACATAACAAGCCACTGGGCAGATGCTCCCACCTTC...TTGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp AATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCATCTGCATCCTGAGTTaGTGGCTGCTGAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: NGQCDALCFQRNSMCGGSICILS*WLLSLS
Trigger: ACTCAAGCTCAGCAGCCAGCAACTCAGGATGCAGAT...GGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TGTGTCAGTTACTGGGAATGTAGAACCATGGTGCCACTTTTGTCCCAGATGTTCTTAGAAGCCTCTTGCTaGTTTCCTCATGAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: CVSYWECRTMVPLLSQMFLEASC*FPHESG
Trigger: TCCAGACTCATGAGGAAAGCAGCAAGAGGCTTCTAA...GAACATCTGGGACAAAAGTGGCACCATGGTTCTACATTCCCAGTAACTGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TTTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCATGTGGAGGTTGCTTGTaGTGGAACATGGCCTATGTG +
Preference number: 4 (lower is better)
Translates to: FGCSLWSADMCMSKDHSACGGCL*WNMAYV
Trigger: CACATAGGCCATGTTCCAGCACAAGCAACCTCCACA...TGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp TCAATTCCCATCCTTCCCAGTGAACCAGGAAAGCCCAGCTATAAACTTGGGATCAGGGCCTCTACCATTTaGGCAACCTTTTTCTTATCT +
Preference number: 4 (lower is better)
Translates to: SIPILPSEPGKPSYKLGIRASTI*ATFFLS
Trigger: AGATAAGAAAAAGGTTGCCCAAATGGTAGAGGCCCT...GATCCCAAGTTTATAGCTGGGCTTTCCTGGTTCACTGGGAAGGATGGGAATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CAA 72 bp GATGACTGTTTTTGCAGTCCCGATGAGATATCTGGCTaGCAGGTGAGCATGAACACCCTGAATGGAATCAAA +
Preference number: 4 (lower is better)
Translates to: DDCFCSPDEISG*QVSMNTLNGIK
Trigger: TTTGATTCCATTCAGGGTGTTCATGCTCACCTGCAAGCCAGATATCTCATCGGGACTGCAAAAACAGTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TGTGTCAGTTACTGGGAATGTAGAACCATGGTGCCACTTTTGTCCCAGATGTTCCTTAAGAACATTGAATaGTGGCAGACACGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: CVSYWECRTMVPLLSQMFLKNIE*WQTRRE
Trigger: TTCTCTCCGTGTCTGCCAGCATTCAATGTTCTTAAG...GAACATCTGGGACAAAAGTGGCACCATGGTTCTACATTCCCAGTAACTGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp AATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCGCTTTCTGCAGCCTCTaGGTTCCCAATGAGATAATC +
Preference number: 4 (lower is better)
Translates to: NGQCDALCFQRNSMCGGSAFCSL*VPNEII
Trigger: GATTATCTCATTGGGAACCCAGAGGCTGCAGAAAGC...GGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCCAATGGCAAAAATGGTaGGCAGCATGCAAAGGAACA +
Preference number: 4 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPQWQKW*AACKGT
Trigger: TGTTCCTTTGCATGCTGCCCACCATTTTTGCCATTG...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp TTTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCAGCTTGTAGTGGACAATaGCAAAAATGGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: FGCSLWSADMCMSKDHSAACSGQ*QKWWAA
Trigger: TGCTGCCCACCATTTTTGCCATTGTCCACTACAAGC...TGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCTTTGATGGTCACTGCTaGATGCTGCTGACACAGAAT +
Preference number: 4 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPFDGHC*MLLTQN
Trigger: ATTCTGTGTCAGCAGCATCCAGCAGTGACCATCAAA...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CAA 72 bp ATGTACTCTGAATACTTCAAGGGTAGCCACCCGATTTaGGGTGCTCACTATGGAGTGCTGATATGTGTATGT +
Preference number: 4 (lower is better)
Translates to: MYSEYFKGSHPI*GAHYGVLICVC
Trigger: ACATACACATATCAGCACTCCATAGTGAGCACCCAAAATCGGGTGGCTACCCTTGAAGTATTCAGAGTACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp CTCTCTTACAGAAAGGGTGGGACCATGTGCCCTCAATATTTCCAAAGAGATCCAGCCATGAGATCTTTCTaGAACTGTATATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LSYRKGGTMCPQYFQRDPAMRSF*NCIFWK
Trigger: CTTCCAGAATATACAGTTTCAGAAAGATCTCATGGC...TGGATCTCTTTGGAAATATTGAGGGCACATGGTCCCACCCTTTCTGTAAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCCATATTCAGGAAACTTaGTTTCAAGGTCCCAACACC +
Preference number: 4 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPHIQET*FQGPNT
Trigger: GGTGTTGGGACCTTGAAAGCAAGTTTCCTGAATATG...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp TTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCAACCCCCATCCAAATCATaGCTTGATTGTAGACAAGGT +
Preference number: 4 (lower is better)
Translates to: LGAHYGVLICVCQKTIVQPPSKS*LDCRQG
Trigger: ACCTTGTCTACAATCAAGGCATGATTTGGATGGGGG...TTGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR GCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCGCATCTATCTTGAAATaGCTTTCTGGCCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPASILK*LSGQKA
Trigger: AGCTTTCTGGCCAGAAAGGCATTTCAAGATAGATGC...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CCA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCCATATGGCCATTGTTTaGGGATGTTGCCATATACAC +
Preference number: 4 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPHMAIV*GCCHIH
Trigger: GTGTATATGGCAACATCCCCAAACAATGGCCATATG...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
3UTR CAA 72 bp AAATACCAATCTTTACACAAACCTTCTTGGTTCGCATaGGGAGTTATCTTAGCCTCTAATCGCATGTGGCCT +
Preference number: 4 (lower is better)
Translates to: KYQSLHKPSWFA*GVILASNRMWP
Trigger: AGGCCACATGCGATTAGAGGCTAAGATAACTCCCAATGCGAACCAAGAAGGTTTGTGTAAAGATTGGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR TCA 90 bp TTCAATGTGTGGAGGGTCCCCATTGTTATTCTAATTGACAGCAGTGACAGGAAATCTGGTGTTATTTTCTaGTCTGTCACCAGTGTAAAA +
Preference number: 4 (lower is better)
Translates to: FNVWRVPIVILIDSSDRKSGVIF*SVTSVK
Trigger: TTTTACACTGGTGACAGATCAGAAAATAACACCAGA...TTTCCTGTCACTGCTGTCAATTAGAATAACAATGGGGACCCTCCACACATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS GCA 90 bp CTCCCGGGGAATGGTCTTGCTGGCTGTACTTCCAAAGGGCTGGCCTaGGATCAGCTCGGGAAGGACAACAAAGGCACCGGTCATCACTGT +
Preference number: 5 (lower is better)
Translates to: LPGNGLAGCTSKGLA*DQLGKDNKGTGHHC
Trigger: ACAGTGATGACCGGTGCCTTTGTTGTCCTTCCCGAGCTGATCGCAGGCCAGCCCTTTGGAAGTACAGCCAGCAAGACCATTCCCCGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 90 bp ATCTGCTCCCGGGGAATGGTCTTGCTGGCTGTACTTCCAAAGGGCTaGCCTGCGATCAGCTCGGGAAGGACAACAAAGGCACCGGTCATC +
Preference number: 5 (lower is better)
Translates to: ICSRGMVLLAVLPKG*PAISSGRTTKAPVI
Trigger: GATGACCGGTGCCTTTGTTGTCCTTCCCGAGCTGATCGCAGGCCAGCCCTTTGGAAGTACAGCCAGCAAGACCATTCCCCGGGAGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 90 bp CTCTTCTACGACCCATGTGCTAGTGTTTCTCCTGAGCTCCGCTCCTaGTCCAGGTGTGGGCCACTGCCCTTCTTCAGGCACTGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: LFYDPCASVSPELRS*SRCGPLPFFRHCPG
Trigger: ACCAGGACAGTGCCTGAAGAAGGGCAGTGGCCCACACCTGGATCAGGAGCGGAGCTCAGGAGAAACACTAGCACATGGGTCGTAGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS-3UTR CAA 90 bp TGCCTGTGTCTGGAAATAGGTTTGGCTTCCCTAACCTACTTCCATGTCCCAGGGGGGGTCCCTGGACCCTaGTCCAGGACTCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: CLCLEIGLASLTYFHVPGGVPGP*SRTLWQ
Trigger: CTGCCACAGAGTCCTGGACAAGGGTCCAGGGACCCC...CCCTGGGACATGGAAGTAGGTTAGGGAAGCCAAACCTATTTCCAGACACAGGCA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS GCA 90 bp GTGAAGGACGGCTCGAACTTGGCCTTGACTCTGGCCTTCAGGGCATaGTGTGGGTATTGGCCGTTCCTGGATCGTGGCTTTCTGTGTACA +
Preference number: 5 (lower is better)
Translates to: VKDGSNLALTLAFRA*CGYWPFLDRGFLCT
Trigger: TGTACACAGAAAGCCACGATCCAGGAACGGCCAATACCCACAGCATGCCCTGAAGGCCAGAGTCAAGGCCAAGTTCGAGCCGTCCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 90 bp CTGATCCAGGTGTGGGCCACTGCCCTTCTTCAGGCACTGTCCTGGTaGCAGAGAAGGTGGGAGCATCTGCCCAGTGGCTTGTTATGTTTT +
Preference number: 5 (lower is better)
Translates to: LIQVWATALLQALSW*QRRWEHLPSGLLCF
Trigger: AAAACATAACAAGCCACTGGGCAGATGCTCCCACCTTCTCTGCCACCAGGACAGTGCCTGAAGAAGGGCAGTGGCCCACACCTGGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 90 bp AGTACCAGGACCCTTGCTAACTGGAAGCGCAGTGTCGTCCGTGGATaGTACATCTCCAAGGCAGCGATGAGGTCAAAGGCAGACGGTGCT +
Preference number: 5 (lower is better)
Translates to: STRTLANWKRSVVRG*YISKAAMRSKADGA
Trigger: AGCACCGTCTGCCTTTGACCTCATCGCTGCCTTGGAGATGTATCATCCACGGACGACACTGCGCTTCCAGTTAGCAAGGGTCCTGGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS GCA 90 bp GTCCCTGGACCCTTGTCCAGGACTCTGTGGCAGGGACCTTGTGATTaGCTCCATCCTGAGGCTCTTGCTACTCAGAGAGTCGAAGTTAAG +
Preference number: 5 (lower is better)
Translates to: VPGPLSRTLWQGPCD*LHPEALATQRVEVK
Trigger: CTTAACTTCGACTCTCTGAGTAGCAAGAGCCTCAGGATGGAGGCAATCACAAGGTCCCTGCCACAGAGTCCTGGACAAGGGTCCAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 90 bp GCATCTCCTCCTCTTCTTCACTCAGCTGTGGAGAGCAAGGCTGGTTaGGAACCCAGGACATGTACTGCTGCACATTCCTGGGGTACAGCT +
Preference number: 5 (lower is better)
Translates to: ASPPLLHSAVESKAG*EPRTCTAAHSWGTA
Trigger: AGCTGTACCCCAGGAATGTGCAGCAGTACATGTCCTGGGTTCCCAACCAGCCTTGCTCTCCACAGCTGAGTGAAGAAGAGGAGGAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 90 bp CTGAGCATCTCCTCCTCTTCTTCACTCAGCTGTGGAGAGCAAGGCTaGTTGGGAACCCAGGACATGTACTGCTGCACATTCCTGGGGTAC +
Preference number: 5 (lower is better)
Translates to: LSISSSSSLSCGEQG*LGTQDMYCCTFLGY
Trigger: GTACCCCAGGAATGTGCAGCAGTACATGTCCTGGGTTCCCAACCAGCCTTGCTCTCCACAGCTGAGTGAAGAAGAGGAGGAGATGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 90 bp TCGAACTTGGCCTTGACTCTGGCCTTCAGGGCATGCTGTGGGTATTaGCCGTTCCTGGATCGTGGCTTTCTGTGTACAAATGTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SNLALTLAFRACCGY*PFLDRGFLCTNVGL
Trigger: GAGGCCCACATTTGTACACAGAAAGCCACGATCCAGGAACGGCCAATACCCACAGCATGCCCTGAAGGCCAGAGTCAAGGCCAAGTTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 90 bp GGACGGCTCGAACTTGGCCTTGACTCTGGCCTTCAGGGCATGCTGTaGGTATTGGCCGTTCCTGGATCGTGGCTTTCTGTGTACAAATGT +
Preference number: 5 (lower is better)
Translates to: GRLELGLDSGLQGML*VLAVPGSWLSVYKC
Trigger: ACATTTGTACACAGAAAGCCACGATCCAGGAACGGCCAATACCCACAGCATGCCCTGAAGGCCAGAGTCAAGGCCAAGTTCGAGCCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS-3UTR CAA 90 bp AGACTGTACCTCTGCAAGGACATCTGTCTGGCCTTGGGATGGTGCCACCCTTGCAAGATGGCAGCTGTTTaGCTTTCTGCAGCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RLYLCKDICLALGWCHPCKMAAV*LSAASG
Trigger: CCCAGAGGCTGCAGAAAGCAAAACAGCTGCCATCTT...GCAAGGGTGGCACCATCCCAAGGCCAGACAGATGTCCTTGCAGAGGTACAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CAA 90 bp AGGAAATTACAGCCCTCGGGGTCTCAGAACCTCAGACAGCATCAATACATAAGCCTCCCAGCACTGGCCTaGTGGGCCCTGCATGTAGGG +
Preference number: 5 (lower is better)
Translates to: RKLQPSGSQNLRQHQYISLPALA*WALHVG
Trigger: CCCTACATGCAGGGCCCACAAGGCCAGTGCTGGGAG...GCTTATGTATTGATGCTGTCTGAGGTTCTGAGACCCCGAGGGCTGTAATTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CAA 90 bp CCCTGGCTGTGTTATGGGATGCCTCTGTTTTCTTATAATGCCCCAGGTTTGCTCTGCTGGTGGGGTACATaGCAGGTCAGCACCGCCCAG +
Preference number: 5 (lower is better)
Translates to: PWLCYGMPLFSYNAPGLLCWWGT*QVSTAQ
Trigger: CTGGGCGGTGCTGACCTGCAATGTACCCCACCAGCA...GAGCAAACCTGGGGCATTATAAGAAAACAGAGGCATCCCATAACACAGCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS GCA 90 bp AACTTCAGCACAATCTCCTTGGCTCGTCTCAGTGCCCGCAGTTTCTaGCCCATGGTCCAGGGTCTGCAGCGGATATTTGCCATGAGATCT +
Preference number: 5 (lower is better)
Translates to: NFSTISLARLSARSF*PMVQGLQRIFAMRS
Trigger: AGATCTCATGGCAAATATCCGCTGCAGACCCTGGACCATGGGGCAGAAACTGCGGGCACTGAGACGAGCCAAGGAGATTGTGCTGAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 90 bp CGGAGTTACCAAGAAGCAGGGAGTCCTGGTAGAGATAACACTGGCTaGCGTTTCTCCGAATGCTTCTGTAGCGCTGGGATGCCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: RSYQEAGSPGRDNTG*RFSECFCSAGMPLR
Trigger: CCTCAAAGGCATCCCAGCGCTACAGAAGCATTCGGAGAAACGCCAGCCAGTGTTATCTCTACCAGGACTCCCTGCTTCTTGGTAACTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 90 bp GCTGGAAGTATCACCACGGGGCTGCTGATATGTCCAACTACAGCGTaGAACCAGGTCGGGAAGTCATTCTCTATCGTCTCGGACACGATG +
Preference number: 5 (lower is better)
Translates to: AGSITTGLLICPTTA*NQVGKSFSIVSDTM
Trigger: CATCGTGTCCGAGACGATAGAGAATGACTTCCCGACCTGGTTTCACGCTGTAGTTGGACATATCAGCAGCCCCGTGGTGATACTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 90 bp TCTGGCCTTCAGGGCATGCTGTGGGTATTGGCCGTTCCTGGATCGTaGCTTTCTGTGTACAAATGTGGGCCTCTCAAGCTGGTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: SGLQGMLWVLAVPGS*LSVYKCGPLKLVFK
Trigger: TTTGAAGACCAGCTTGAGAGGCCCACATTTGTACACAGAAAGCCACGATCCAGGAACGGCCAATACCCACAGCATGCCCTGAAGGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS-3UTR CAA 90 bp TTCCCTAACCTACTTCCATGTCCCAGGGAACTCCAGGCCTCAGTCCTAACCCCAAGGAGCACCAGGATGTaGGCAATGATTCTCAGACAG +
Preference number: 5 (lower is better)
Translates to: FPNLLPCPRELQASVLTPRSTRM*AMILRQ
Trigger: CTGTCTGAGAATCATTGCCAACATCCTGGTGCTCCT...TGGGGTTAGGACTGAGGCCTGGAGTTCCCTGGGACATGGAAGTAGGTTAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS CCA 90 bp CCTGCCTGCCTGGCATCGCTAGGGATGGCTAGGGCCTCTACCATTTaGGCAACCTTTTTCTTATCTTCAGATCTCGCATTTTGGATCTGC +
Preference number: 5 (lower is better)
Translates to: PACLASLGMARASTI*ATFFLSSDLAFWIC
Trigger: GCAGATCCAAAATGCGAGATCTGAAGATAAGAAAAAGGTTGCCCAAATGGTAGAGGCCCTAGCCATCCCTAGCGATGCCAGGCAGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CAA 90 bp AGGAAATTACAGCCCTCGGGGTCTCAGAACCTCAGACAGCATCAATACATAAGCTGCTGGCTGCTGAGCTaGAGTGATCTCGCGATGCTC +
Preference number: 5 (lower is better)
Translates to: RKLQPSGSQNLRQHQYISCWLLS*SDLAML
Trigger: GAGCATCGCGAGATCACTCAAGCTCAGCAGCCAGCA...GCTTATGTATTGATGCTGTCTGAGGTTCTGAGACCCCGAGGGCTGTAATTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS TCA 90 bp GGACCGGTCCACCACAAAGTAGATGAGATAGATGCTTCCAGCCAGTaGGAGGAGCACCAGGATGTTGGCAATGATTCTCAGACAGACAGT +
Preference number: 5 (lower is better)
Translates to: GPVHHKVDEIDASSQ*EEHQDVGNDSQTDS
Trigger: ACTGTCTGTCTGAGAATCATTGCCAACATCCTGGTGCTCCTCTCACTGGCTGGAAGCATCTATCTCATCTACTTTGTGGTGGACCGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 90 bp TTGGCTGAAAGTCTTTCCGGGAAAGAGGCTCTGAGCGGACATCTTTaGGGGGCTGTGTCTGTGTCACAGATGAGCAGGATCTGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: LAESLSGKEALSGHL*GAVSVSQMSRICSC
Trigger: ACAAGAACAGATCCTGCTCATCTGTGACACAGACACAGCCCCTCAAAGATGTCCGCTCAGAGCCTCTTTCCCGGAAAGACTTTCAGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS GCA 90 bp CCCTTCTTCAGGCACTGTCCTGGTGGCAGAGAAGGTGGGAGCATCTaGCCAGTGGCTTGTTATGTTTTTAGTAGCAGCTTCCTCAATGTT +
Preference number: 5 (lower is better)
Translates to: PFFRHCPGGREGGSI*PVACYVFSSSFLNV
Trigger: AACATTGAGGAAGCTGCTACTAAAAACATAACAAGCCACTGGGCAGATGCTCCCACCTTCTCTGCCACCAGGACAGTGCCTGAAGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 90 bp TCAGGCACTGTCCTGGTGGCAGAGAAGGTGGGAGCATCTGCCCAGTaGCTTGTTATGTTTTTAGTAGCAGCTTCCTCAATGTTCATGCTG +
Preference number: 5 (lower is better)
Translates to: SGTVLVAEKVGASAQ*LVMFLVAASSMFML
Trigger: CAGCATGAACATTGAGGAAGCTGCTACTAAAAACATAACAAGCCACTGGGCAGATGCTCCCACCTTCTCTGCCACCAGGACAGTGCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS-3UTR CAA 90 bp CTCTCTTACAGAAAGGGTGGGACCATGTGCCCTCAATATTTCCAAAGAGATCCAGGAGAGCAAGGCTGGTaGGGAACCCAGGACATGTAC +
Preference number: 5 (lower is better)
Translates to: LSYRKGGTMCPQYFQRDPGEQGW*GTQDMY
Trigger: GTACATGTCCTGGGTTCCCAACCAGCCTTGCTCTCC...TGGATCTCTTTGGAAATATTGAGGGCACATGGTCCCACCCTTTCTGTAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS TCA 90 bp TCAAGATGGCAGCTGTTTTGCTTTCTGCAGCCTCTGGGTTCCCAATaGGATAATCCCAGGCACAAAACACCCGCCAGCAGAAGGTGTAAT +
Preference number: 5 (lower is better)
Translates to: SRWQLFCFLQPLGSQ*DNPRHKTPASRRCN
Trigger: ATTACACCTTCTGCTGGCGGGTGTTTTGTGCCTGGGATTATCTCATTGGGAACCCAGAGGCTGCAGAAAGCAAAACAGCTGCCATCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 90 bp CGCATTTTGGATCTGCATCCTGAGTTGCTGGCTGCTGAGCTTGAGTaGTCTCGCGATGCTCTGAAGGTAGTAGATGAGCATGAACAGAAG +
Preference number: 5 (lower is better)
Translates to: RILDLHPELLAAELE*SRDALKVVDEHEQK
Trigger: CTTCTGTTCATGCTCATCTACTACCTTCAGAGCATCGCGAGATCACTCAAGCTCAGCAGCCAGCAACTCAGGATGCAGATCCAAAATGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 90 bp TTGTGGGCCCTGCATGTAGGGCACTGTCTTGTTGGCCTTTGTATGTaGCGTGATAGAAGTCAGAAAGCTTGTCTCTTCTACGACCCATGT +
Preference number: 5 (lower is better)
Translates to: LWALHVGHCLVGLCM*RDRSQKACLFYDPC
Trigger: ACATGGGTCGTAGAAGAGACAAGCTTTCTGACTTCTATCACGCCACATACAAAGGCCAACAAGACAGTGCCCTACATGCAGGGCCCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS-3UTR CAA 90 bp TCCTTTACTCTGGATGCTACATGGGTTCATGGCTTACCAGACCATGGTATCATCGATCTGCATCCTGAGTaGCTGGCTGCTGAGCTTGAG +
Preference number: 5 (lower is better)
Translates to: SFTLDATWVHGLPDHGIIDLHPE*LAAELE
Trigger: CTCAAGCTCAGCAGCCAGCAACTCAGGATGCAGATC...GATGATACCATGGTCTGGTAAGCCATGAACCCATGTAGCATCCAGAGTAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CAA 90 bp TTCCCTAACCTACTTCCATGTCCCAGGGAACTCCAGGCCTCAGTCCTAACCCCATTAAGCATATGGCCATaGTTTGGGGATGTTGCCATA +
Preference number: 5 (lower is better)
Translates to: FPNLLPCPRELQASVLTPLSIWP*FGDVAI
Trigger: TATGGCAACATCCCCAAACAATGGCCATATGCTTAA...TGGGGTTAGGACTGAGGCCTGGAGTTCCCTGGGACATGGAAGTAGGTTAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CAA 90 bp TCCTTTACTCTGGATGCTACATGGGTTCATGGCTTACCAGACCATGGTATCATCCTATGTGGATGCCTGTaGGTGTCCTGCTCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: SFTLDATWVHGLPDHGIILCGCL*VSCSGL
Trigger: AAGGCCAGAGCAGGACACCAACAGGCATCCACATAG...GATGATACCATGGTCTGGTAAGCCATGAACCCATGTAGCATCCAGAGTAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CAA 90 bp TGTGTCAGTTACTGGGAATGTAGAACCATGGTGCCACTTTTGTCCCAGATGTTCTCTGAGCGGACATCTTaGAGGGGCTGTGTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: CVSYWECRTMVPLLSQMFSERTS*RGCVCV
Trigger: GACACAGACACAGCCCCTCAAAGATGTCCGCTCAGA...GAACATCTGGGACAAAAGTGGCACCATGGTTCTACATTCCCAGTAACTGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS TCA 90 bp CCCTGGCTGGACATGACATGCAGGTATTGGTCATTGTTGCTGTTTTaGTGGTCACTGCTGGATGCTGCTGACACAGAATCAGATTCTGTG +
Preference number: 5 (lower is better)
Translates to: PWLDMTCRYWSLLLF*WSLLDAADTESDSV
Trigger: CACAGAATCTGATTCTGTGTCAGCAGCATCCAGCAGTGACCATCAAAACAGCAACAATGACCAATACCTGCATGTCATGTCCAGCCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 90 bp ATATGGCCATTGTTTGGGGATGTTGCCATATACACTGAGGACAGCTaGCTGATAAGGTCGCTGTCCTTTAGAAGCCTCTTGCTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: IWPLFGDVAIYTEDS*LIRSLSFRSLLLLS
Trigger: GGAAAGCAGCAAGAGGCTTCTAAAGGACAGCGACCTTATCAGCCAGCTGTCCTCAGTGTATATGGCAACATCCCCAAACAATGGCCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 90 bp TCCATCCTGAGGCTCTTGCTACTCAGAGAGTCGAAGTTAAGCATATaGCCATTGTTTGGGGATGTTGCCATATACACTGAGGACAGCTGG +
Preference number: 5 (lower is better)
Translates to: SILRLLLLRESKLSI*PLFGDVAIYTEDSW
Trigger: CCAGCTGTCCTCAGTGTATATGGCAACATCCCCAAACAATGGCCATATGCTTAACTTCGACTCTCTGAGTAGCAAGAGCCTCAGGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 90 bp GTGGGTATTGGCCGTTCCTGGATCGTGGCTTTCTGTGTACAAATGTaGGCCTCTCAAGCTGGTCTTCAAAACTATTATCCCCAGATCTGT +
Preference number: 5 (lower is better)
Translates to: VGIGRSWIVAFCVQM*ASQAGLQNYYPQIC
Trigger: ACAGATCTGGGGATAATAGTTTTGAAGACCAGCTTGAGAGGCCCACATTTGTACACAGAAAGCCACGATCCAGGAACGGCCAATACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 90 bp TCTCTATCGTCTCGGACACGATGTCATAAATTTTCTCTTGTCCGCTaGAGGGACCACAGTTCAGAGACGGCTTGTAGTGGACAATGGCAA +
Preference number: 5 (lower is better)
Translates to: SLSSRTRCHKFSLVR*RDHSSETACSGQWQ
Trigger: TTGCCATTGTCCACTACAAGCCGTCTCTGAACTGTGGTCCCTTCAGCGGACAAGAGAAAATTTATGACATCGTGTCCGAGACGATAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS GCA 90 bp TGCCCGCAGTTTCTGCCCCATGGTCCAGGGTCTGCAGCGGATATTTaGCATGAGATCTTTCTGAAACTGTATATTCTGGAAGATTTGTTC +
Preference number: 5 (lower is better)
Translates to: CPQFLPHGPGSAADI*HEIFLKLYILEDLF
Trigger: GAACAAATCTTCCAGAATATACAGTTTCAGAAAGATCTCATGGCAAATATCCGCTGCAGACCCTGGACCATGGGGCAGAAACTGCGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS-3UTR CAA 90 bp CCCTGGCTGTGTTATGGGATGCCTCTGTTTTCTTATAATGCCCCAGGTTTGCTCGGAGAGTCTTTGGCTTaGAATTTTCACTCGACTCTG +
Preference number: 5 (lower is better)
Translates to: PWLCYGMPLFSYNAPGLLGESLA*NFHSTL
Trigger: CAGAGTCGAGTGAAAATTCAAAGCCAAAGACTCTCC...GAGCAAACCTGGGGCATTATAAGAAAACAGAGGCATCCCATAACACAGCCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS TCA 90 bp CATTCCTGGGGTACAGCTCTACAATGTCACCTAAAGCATCTATCTTaGAATGCCTTTCTGGCCAGAAAGCTCGGTGGGTCTTTTTGTGAG +
Preference number: 5 (lower is better)
Translates to: HSWGTALQCHLKHLS*NAFLARKLGGSFCE
Trigger: CTCACAAAAAGACCCACCGAGCTTTCTGGCCAGAAAGGCATTTCAAGATAGATGCTTTAGGTGACATTGTAGAGCTGTACCCCAGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS GCA 90 bp ATTTGGGCAACCTTTTTCTTATCTTCAGATCTCGCATTTTGGATCTaGATCCTGAGTTGCTGGCTGCTGAGCTTGAGTGATCTCGCGATG +
Preference number: 5 (lower is better)
Translates to: IWATFFLSSDLAFWI*ILSCWLLSLSDLAM
Trigger: CATCGCGAGATCACTCAAGCTCAGCAGCCAGCAACTCAGGATGCAGATCCAAAATGCGAGATCTGAAGATAAGAAAAAGGTTGCCCAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS-3UTR CAA 90 bp AATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCTGTTCTTGTGGAGGTaGCTTGTGCTGGAACATGGC +
Preference number: 5 (lower is better)
Translates to: NGQCDALCFQRNSMCGGSLFLWR*LVLEHG
Trigger: GCCATGTTCCAGCACAAGCAACCTCCACAAGAACAG...GGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS TCA 90 bp GTAGTACACCCTTCGCTGGTATTTAGGGTCTCTGGTGTTATTTTCTaGTCTGTCACCAGTGTAAAAACAAGAAGACCGAGGCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: VVHPSLVFRVSGVIF*SVTSVKTRRPRQVC
Trigger: ACAGACCTGCCTCGGTCTTCTTGTTTTTACACTGGTGACAGATCAGAAAATAACACCAGAGACCCTAAATACCAGCGAAGGGTGTACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 90 bp TCTACCATTTGGGCAACCTTTTTCTTATCTTCAGATCTCGCATTTTaGATCTGCATCCTGAGTTGCTGGCTGCTGAGCTTGAGTGATCTC +
Preference number: 5 (lower is better)
Translates to: STIWATFFLSSDLAF*ICILSCWLLSLSDL
Trigger: GAGATCACTCAAGCTCAGCAGCCAGCAACTCAGGATGCAGATCCAAAATGCGAGATCTGAAGATAAGAAAAAGGTTGCCCAAATGGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS-3UTR CAA 90 bp AGGAAATTACAGCCCTCGGGGTCTCAGAACCTCAGACAGCATCAATACATAAGCCATGACATGCAGGTATaGGTCATTGTTGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: RKLQPSGSQNLRQHQYISHDMQV*VIVAVL
Trigger: CAAAACAGCAACAATGACCAATACCTGCATGTCATG...GCTTATGTATTGATGCTGTCTGAGGTTCTGAGACCCCGAGGGCTGTAATTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CAA 90 bp CTCTCTTACAGAAAGGGTGGGACCATGTGCCCTCAATATTTCCAAAGAGATCCATTCATGCTGTTCACTTaGTCCAGAAGAGCAATGATC +
Preference number: 5 (lower is better)
Translates to: LSYRKGGTMCPQYFQRDPFMLFT*SRRAMI
Trigger: GATCATTGCTCTTCTGGACAAAGTGAACAGCATGAA...TGGATCTCTTTGGAAATATTGAGGGCACATGGTCCCACCCTTTCTGTAAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CAA 90 bp TTCAATGTGTGGAGGGTCCCCATTGTTATTCTAATTGACAGCAGTGACAGGAAAGTCATTGTTGCTGTTTaGATGGTCACTGCTGGATGC +
Preference number: 5 (lower is better)
Translates to: FNVWRVPIVILIDSSDRKVIVAV*MVTAGC
Trigger: GCATCCAGCAGTGACCATCAAAACAGCAACAATGAC...TTTCCTGTCACTGCTGTCAATTAGAATAACAATGGGGACCCTCCACACATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS TCA 90 bp CAGCTTCCTCAATGTTCATGCTGTTCACTTTGTCCAGAAGAGCAATaGTCAAGCTGTAGAGATTTCCTAAATACAGTACCAGGACCCTTG +
Preference number: 5 (lower is better)
Translates to: QLPQCSCCSLCPEEQ*SSCRDFLNTVPGPL
Trigger: CAAGGGTCCTGGTACTGTATTTAGGAAATCTCTACAGCTTGATCATTGCTCTTCTGGACAAAGTGAACAGCATGAACATTGAGGAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS-3UTR CAA 90 bp ATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCCTATATTCTGGAAGATTaGTTCCGGATCACTGCTGTC +
Preference number: 5 (lower is better)
Translates to: MVNVMLSVSKEIQCVEGPYILED*FRITAV
Trigger: GACAGCAGTGATCCGGAACAAATCTTCCAGAATATA...GGGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CAA 90 bp TTCAATGTGTGGAGGGTCCCCATTGTTATTCTAATTGACAGCAGTGACAGGAAACCATATTCAGGAAACTaGCTTTCAAGGTCCCAACAC +
Preference number: 5 (lower is better)
Translates to: FNVWRVPIVILIDSSDRKPYSGN*LSRSQH
Trigger: GTGTTGGGACCTTGAAAGCAAGTTTCCTGAATATGG...TTTCCTGTCACTGCTGTCAATTAGAATAACAATGGGGACCCTCCACACATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CAA 90 bp AATGGTCAATGTGATGCTCTCTGTTTCCAAAGAAATTCAATGTGTGGAGGGTCCATGAGCTTAAGAACATaGAATGCTGGCAGACACGGA +
Preference number: 5 (lower is better)
Translates to: NGQCDALCFQRNSMCGGSMSLRT*NAGRHG
Trigger: TCCGTGTCTGCCAGCATTCAATGTTCTTAAGCTCAT...GGACCCTCCACACATTGAATTTCTTTGGAAACAGAGAGCATCACATTGACCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CAA 90 bp TTTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCAGTCATAAATTTTCTCTaGTCCGCTGAAGGGACCACA +
Preference number: 5 (lower is better)
Translates to: FGCSLWSADMCMSKDHSAVINFL*SAEGTT
Trigger: TGTGGTCCCTTCAGCGGACAAGAGAAAATTTATGAC...TGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CAA 90 bp TTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCAATTCAGATCTCGCATTTaGGATCTGCATCCTGAGTTG +
Preference number: 5 (lower is better)
Translates to: LGAHYGVLICVCQKTIVQFRSRI*DLHPEL
Trigger: CAACTCAGGATGCAGATCCAAAATGCGAGATCTGAA...TTGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS-3UTR CAA 90 bp TTTGGGTGCTCACTATGGAGTGCTGATATGTGTATGTCAAAAGACCATAGTGCAGAGCTTGGAGAGTCTTaGGCTTTGAATTTTCACTCG +
Preference number: 5 (lower is better)
Translates to: FGCSLWSADMCMSKDHSAELGES*ALNFHS
Trigger: CGAGTGAAAATTCAAAGCCAAAGACTCTCCAAGCTC...TGCACTATGGTCTTTTGACATACACATATCAGCACTCCATAGTGAGCACCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS GCA 72 bp CAGACGGGCGAATTTCCGCCAGAGCTCTGCTCCTGCTaGCTGGTAGCCTCGAGTCCTGGTCAGCCTCCCTTC +
Preference number: 6 (lower is better)
Translates to: QTGEFPPELCSC*LVASSPGQPPF
Trigger: GAAGGGAGGCTGACCAGGACTCGAGGCTACCAGGCAGCAGGAGCAGAGCTCTGGCGGAAATTCGCCCGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS GCA 72 bp CTCCTGAGCTCCGCTCCTGATCCAGGTGTGGGCCACTaGCCTTCTTCAGGCACTGTCCTGGTGGCAGAGAAG +
Preference number: 6 (lower is better)
Translates to: LLSSAPDPGVGH*PSSGTVLVAEK
Trigger: CTTCTCTGCCACCAGGACAGTGCCTGAAGAAGGGCAGTGGCCCACACCTGGATCAGGAGCGGAGCTCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 72 bp AGAGCAGGGGTCCCTGGACCCTTGTCCAGGACTCTGTaGCAGGGACCTTGTGATTGCCTCCATCCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: RAGVPGPLSRTL*QGPCDCLHPEA
Trigger: AGCCTCAGGATGGAGGCAATCACAAGGTCCCTGCCACAGAGTCCTGGACAAGGGTCCAGGGACCCCTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 72 bp GACCCATGTGCTAGTGTTTCTCCTGAGCTCCGCTCCTaGTCCAGGTGTGGGCCACTGCCCTTCTTCAGGCAC +
Preference number: 6 (lower is better)
Translates to: DPCASVSPELRS*SRCGPLPFFRH
Trigger: GTGCCTGAAGAAGGGCAGTGGCCCACACCTGGATCAGGAGCGGAGCTCAGGAGAAACACTAGCACATGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS GCA 72 bp TTTTCACTCGACTCTGCTTCAGTGGCTGAGCCTGCCTaGCTGGCATCGCTAGGGATGGCTAGGGCCTCTACC +
Preference number: 6 (lower is better)
Translates to: FSLDSASVAEPA*LASLGMARAST
Trigger: GGTAGAGGCCCTAGCCATCCCTAGCGATGCCAGGCAGGCAGGCTCAGCCACTGAAGCAGAGTCGAGTGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS CAA 90 bp CCTCGAGTCCTGGTCAGCCTCCCTTCAAACTTCAGCACAATCTCCTaGGCTCGTCTCAGTGCCCGCAGTTTCTGCCCCATGGTCCAGGGT +
Preference number: 6 (lower is better)
Translates to: PRVLVSLPSNFSTIS*ARLSARSFCPMVQG
Trigger: ACCCTGGACCATGGGGCAGAAACTGCGGGCACTGAGACGAGCCAAGGAGATTGTGCTGAAGTTTGAAGGGAGGCTGACCAGGACTCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS GCA 72 bp ACAATCTCCTTGGCTCGTCTCAGTGCCCGCAGTTTCTaGCCCATGGTCCAGGGTCTGCAGCGGATATTTGCC +
Preference number: 6 (lower is better)
Translates to: TISLARLSARSF*PMVQGLQRIFA
Trigger: GGCAAATATCCGCTGCAGACCCTGGACCATGGGGCAGAAACTGCGGGCACTGAGACGAGCCAAGGAGATTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS GCA 72 bp GGCTCGAACTTGGCCTTGACTCTGGCCTTCAGGGCATaGTGTGGGTATTGGCCGTTCCTGGATCGTGGCTTT +
Preference number: 6 (lower is better)
Translates to: GSNLALTLAFRA*CGYWPFLDRGF
Trigger: AAAGCCACGATCCAGGAACGGCCAATACCCACAGCATGCCCTGAAGGCCAGAGTCAAGGCCAAGTTCGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 72 bp AGACCGAGGCAGGTCTGTCAGGGAGCTAGCAGGGATTaGCCACTGGACCAAATCTCTCCTGAGCATCTCCTC +
Preference number: 6 (lower is better)
Translates to: RPRQVCQGASRD*PLDQISPEHLL
Trigger: GAGGAGATGCTCAGGAGAGATTTGGTCCAGTGGTCAATCCCTGCTAGCTCCCTGACAGACCTGCCTCGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 72 bp CTGGTCAGCCTCCCTTCAAACTTCAGCACAATCTCCTaGGCTCGTCTCAGTGCCCGCAGTTTCTGCCCCATG +
Preference number: 6 (lower is better)
Translates to: LVSLPSNFSTIS*ARLSARSFCPM
Trigger: CATGGGGCAGAAACTGCGGGCACTGAGACGAGCCAAGGAGATTGTGCTGAAGTTTGAAGGGAGGCTGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 90 bp CTCGAACTTGGCCTTGACTCTGGCCTTCAGGGCATGCTGTGGGTATaGGCCGTTCCTGGATCGTGGCTTTCTGTGTACAAATGTGGGCCT +
Preference number: 6 (lower is better)
Translates to: LELGLDSGLQGMLWV*AVPGSWLSVYKCGP
Trigger: AGGCCCACATTTGTACACAGAAAGCCACGATCCAGGAACGGCCAATACCCACAGCATGCCCTGAAGGCCAGAGTCAAGGCCAAGTTCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 90 bp GCTGACACAGAATCAGATTCTGTGAAGGACGGCTCGAACTTGGCCTaGACTCTGGCCTTCAGGGCATGCTGTGGGTATTGGCCGTTCCTG +
Preference number: 6 (lower is better)
Translates to: ADTESDSVKDGSNLA*TLAFRACCGYWPFL
Trigger: CAGGAACGGCCAATACCCACAGCATGCCCTGAAGGCCAGAGTCAAGGCCAAGTTCGAGCCGTCCTTCACAGAATCTGATTCTGTGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 90 bp GATGCTGCTGACACAGAATCAGATTCTGTGAAGGACGGCTCGAACTaGGCCTTGACTCTGGCCTTCAGGGCATGCTGTGGGTATTGGCCG +
Preference number: 6 (lower is better)
Translates to: DAADTESDSVKDGSN*ALTLAFRACCGYWP
Trigger: CGGCCAATACCCACAGCATGCCCTGAAGGCCAGAGTCAAGGCCAAGTTCGAGCCGTCCTTCACAGAATCTGATTCTGTGTCAGCAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 72 bp GCTCCAGCTTCTGGGACCGGTCCACCACAAAGTAGATaGGATAGATGCTTCCAGCCAGTGAGAGGAGCACCA +
Preference number: 6 (lower is better)
Translates to: APASGTGPPQSR*DRCFQPVRGAP
Trigger: TGGTGCTCCTCTCACTGGCTGGAAGCATCTATCTCATCTACTTTGTGGTGGACCGGTCCCAGAAGCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 72 bp GAAGCAGCACAGCTGGAAGTATCACCACGGGGCTGCTaGTATGTCCAACTACAGCGTGAAACCAGGTCGGGA +
Preference number: 6 (lower is better)
Translates to: EAAQLEVSPRGC*YVQLQRETRSG
Trigger: TCCCGACCTGGTTTCACGCTGTAGTTGGACATATCAGCAGCCCCGTGGTGATACTTCCAGCTGTGCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS GCA 72 bp GACCAGACAGTGTCCAGATCCTGTGCAGATGTGATCTaGTCCCGGGGAATGGTCTTGCTGGCTGTACTTCCA +
Preference number: 6 (lower is better)
Translates to: DQTVSRSCADVI*SRGMVLLAVLP
Trigger: TGGAAGTACAGCCAGCAAGACCATTCCCCGGGAGCAGATCACATCTGCACAGGATCTGGACACTGTCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 72 bp CAGGGCATGCTGTGGGTATTGGCCGTTCCTGGATCGTaGCTTTCTGTGTACAAATGTGGGCCTCTCAAGCTG +
Preference number: 6 (lower is better)
Translates to: QGMLWVLAVPGS*LSVYKCGPLKL
Trigger: CAGCTTGAGAGGCCCACATTTGTACACAGAAAGCCACGATCCAGGAACGGCCAATACCCACAGCATGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 72 bp TGGCCTTCAGGGCATGCTGTGGGTATTGGCCGTTCCTaGATCGTGGCTTTCTGTGTACAAATGTGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: WPSGHAVGIGRS*IVAFCVQMWAS
Trigger: AGAGGCCCACATTTGTACACAGAAAGCCACGATCCAGGAACGGCCAATACCCACAGCATGCCCTGAAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 72 bp GACACAGAATCAGATTCTGTGAAGGACGGCTCGAACTaGGCCTTGACTCTGGCCTTCAGGGCATGCTGTGGG +
Preference number: 6 (lower is better)
Translates to: DTESDSVKDGSN*ALTLAFRACCG
Trigger: CCCACAGCATGCCCTGAAGGCCAGAGTCAAGGCCAAGTTCGAGCCGTCCTTCACAGAATCTGATTCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 72 bp ACCCTTGCTAACTGGAAGCGCAGTGTCGTCCGTGGATaGTACATCTCCAAGGCAGCGATGAGGTCAAAGGCA +
Preference number: 6 (lower is better)
Translates to: TLANWKRSVVRG*YISKAAMRSKA
Trigger: TGCCTTTGACCTCATCGCTGCCTTGGAGATGTATCATCCACGGACGACACTGCGCTTCCAGTTAGCAAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 72 bp AGTCTTTCCGGGAAAGAGGCTCTGAGCGGACATCTTTaGGGGGCTGTGTCTGTGTCACAGATGAGCAGGATC +
Preference number: 6 (lower is better)
Translates to: SLSGKEALSGHL*GAVSVSQMSRI
Trigger: GATCCTGCTCATCTGTGACACAGACACAGCCCCTCAAAGATGTCCGCTCAGAGCCTCTTTCCCGGAAAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS GCA 72 bp TGGAGGTTGCTTGTGCTGGAACATGGCCTATGTGGATaGCTGTTGGTGTCCTGCTCTGGCCTTGACCTAGAT +
Preference number: 6 (lower is better)
Translates to: WRLLVLEHGLCG*LLVSCSGLDLD
Trigger: ATCTAGGTCAAGGCCAGAGCAGGACACCAACAGGCATCCACATAGGCCATGTTCCAGCACAAGCAACCTCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 72 bp CAAGAAGCAGGGAGTCCTGGTAGAGATAACACTGGCTaGCGTTTCTCCGAATGCTTCTGTAGCGCTGGGATG +
Preference number: 6 (lower is better)
Translates to: QEAGSPGRDNTG*RFSECFCSAGM
Trigger: CATCCCAGCGCTACAGAAGCATTCGGAGAAACGCCAGCCAGTGTTATCTCTACCAGGACTCCCTGCTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 72 bp GCGGACATCTTTGAGGGGCTGTGTCTGTGTCACAGATaGGCAGGATCTGTTCTTGTGGAGGTTGCTTGTGCT +
Preference number: 6 (lower is better)
Translates to: ADIFEGLCLCHR*AGSVLVEVACA
Trigger: AGCACAAGCAACCTCCACAAGAACAGATCCTGCTCATCTGTGACACAGACACAGCCCCTCAAAGATGTCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 72 bp ACTGATTGGCTGAAAGTCTTTCCGGGAAAGAGGCTCTaGGCGGACATCTTTGAGGGGCTGTGTCTGTGTCAC +
Preference number: 6 (lower is better)
Translates to: TDWLKVFPGKRL*ADIFEGLCLCH
Trigger: GTGACACAGACACAGCCCCTCAAAGATGTCCGCTCAGAGCCTCTTTCCCGGAAAGACTTTCAGCCAATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 72 bp GGCAGGGACCTTGTGATTGCCTCCATCCTGAGGCTCTaGCTACTCAGAGAGTCGAAGTTAAGCATATGGCCA +
Preference number: 6 (lower is better)
Translates to: GRDLVIASILRL*LLRESKLSIWP
Trigger: TGGCCATATGCTTAACTTCGACTCTCTGAGTAGCAAGAGCCTCAGGATGGAGGCAATCACAAGGTCCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 72 bp TTGCTTGTGCTGGAACATGGCCTATGTGGATGCCTGTaGGTGTCCTGCTCTGGCCTTGACCTAGATCCATCT +
Preference number: 6 (lower is better)
Translates to: LLVLEHGLCGCL*VSCSGLDLDPS
Trigger: AGATGGATCTAGGTCAAGGCCAGAGCAGGACACCAACAGGCATCCACATAGGCCATGTTCCAGCACAAGCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 72 bp AAGTCTTTCCGGGAAAGAGGCTCTGAGCGGACATCTTaGAGGGGCTGTGTCTGTGTCACAGATGAGCAGGAT +
Preference number: 6 (lower is better)
Translates to: KSFRERGSERTS*RGCVCVTDEQD
Trigger: ATCCTGCTCATCTGTGACACAGACACAGCCCCTCAAAGATGTCCGCTCAGAGCCTCTTTCCCGGAAAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 72 bp GATCTGCATCCTGAGTTGCTGGCTGCTGAGCTTGAGTaGTCTCGCGATGCTCTGAAGGTAGTAGATGAGCAT +
Preference number: 6 (lower is better)
Translates to: DLHPELLAAELE*SRDALKVVDEH
Trigger: ATGCTCATCTACTACCTTCAGAGCATCGCGAGATCACTCAAGCTCAGCAGCCAGCAACTCAGGATGCAGATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 72 bp TCGCTGTCCTTTAGAAGCCTCTTGCTGCTTTCCTCATaGGTCTGGATTCGAGCCTCTACCATTTGGGCAACC +
Preference number: 6 (lower is better)
Translates to: SLSFRSLLLLSS*VWIRASTIWAT
Trigger: GGTTGCCCAAATGGTAGAGGCTCGAATCCAGACTCATGAGGAAAGCAGCAAGAGGCTTCTAAAGGACAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164944.2
CDS GCA 72 bp TCTTCAGATCTCGCATTTTGGATCTGCATCCTGAGTTaGTGGCTGCTGAGCTTGAGTGATCTCGCGATGCTC +
Preference number: 6 (lower is better)
Translates to: SSDLAFWICILS*WLLSLSDLAML
Trigger: GAGCATCGCGAGATCACTCAAGCTCAGCAGCCAGCAACTCAGGATGCAGATCCAAAATGCGAGATCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS GCA 72 bp CAGATGAGCAGGATCTGTTCTTGTGGAGGTTGCTTGTaGTGGAACATGGCCTATGTGGATGCCTGTTGGTGT +
Preference number: 6 (lower is better)
Translates to: QMSRICSCGGCL*WNMAYVDACWC
Trigger: ACACCAACAGGCATCCACATAGGCCATGTTCCAGCACAAGCAACCTCCACAAGAACAGATCCTGCTCATCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS GCA 72 bp GAACAAATTAGATCATTTAGATCTGTGGGTAGTACCTaGCTGGACTTGGCCTTCCTCCTGCCCAGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: EQIRSFRSVGST*LDLAFLLPSWL
Trigger: CAGCCAGCTGGGCAGGAGGAAGGCCAAGTCCAGGCAGGTACTACCCACAGATCTAAATGATCTAATTTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 72 bp GTCCTGGTGGCAGAGAAGGTGGGAGCATCTGCCCAGTaGCTTGTTATGTTTTTAGTAGCAGCTTCCTCAATG +
Preference number: 6 (lower is better)
Translates to: VLVAEKVGASAQ*LVMFLVAASSM
Trigger: CATTGAGGAAGCTGCTACTAAAAACATAACAAGCCACTGGGCAGATGCTCCCACCTTCTCTGCCACCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 72 bp TCACAGATGAGCAGGATCTGTTCTTGTGGAGGTTGCTaGTGCTGGAACATGGCCTATGTGGATGCCTGTTGG +
Preference number: 6 (lower is better)
Translates to: SQMSRICSCGGC*CWNMAYVDACW
Trigger: CCAACAGGCATCCACATAGGCCATGTTCCAGCACAAGCAACCTCCACAAGAACAGATCCTGCTCATCTGTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 72 bp TGTGTCACAGATGAGCAGGATCTGTTCTTGTGGAGGTaGCTTGTGCTGGAACATGGCCTATGTGGATGCCTG +
Preference number: 6 (lower is better)
Translates to: CVTDEQDLFLWR*LVLEHGLCGCL
Trigger: CAGGCATCCACATAGGCCATGTTCCAGCACAAGCAACCTCCACAAGAACAGATCCTGCTCATCTGTGACACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 72 bp GGCTGTGTCTGTGTCACAGATGAGCAGGATCTGTTCTaGTGGAGGTTGCTTGTGCTGGAACATGGCCTATGT +
Preference number: 6 (lower is better)
Translates to: GCVCVTDEQDLF*WRLLVLEHGLC
Trigger: ACATAGGCCATGTTCCAGCACAAGCAACCTCCACAAGAACAGATCCTGCTCATCTGTGACACAGACACAGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 72 bp TGTGTCTGTGTCACAGATGAGCAGGATCTGTTCTTGTaGAGGTTGCTTGTGCTGGAACATGGCCTATGTGGA +
Preference number: 6 (lower is better)
Translates to: CVCVTDEQDLFL*RLLVLEHGLCG
Trigger: TCCACATAGGCCATGTTCCAGCACAAGCAACCTCCACAAGAACAGATCCTGCTCATCTGTGACACAGACACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 72 bp GGTTGGGAACCCAGGACATGTACTGCTGCACATTCCTaGGGTACAGCTCTACAATGTCACCTAAAGCATCTA +
Preference number: 6 (lower is better)
Translates to: GWEPRTCTAAHS*GTALQCHLKHL
Trigger: TAGATGCTTTAGGTGACATTGTAGAGCTGTACCCCAGGAATGTGCAGCAGTACATGTCCTGGGTTCCCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 72 bp GGCCGTTCCTGGATCGTGGCTTTCTGTGTACAAATGTaGGCCTCTCAAGCTGGTCTTCAAAACTATTATCCC +
Preference number: 6 (lower is better)
Translates to: GRSWIVAFCVQM*ASQAGLQNYYP
Trigger: GGGATAATAGTTTTGAAGACCAGCTTGAGAGGCCCACATTTGTACACAGAAAGCCACGATCCAGGAACGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 72 bp ACACGGAGAGAAGAAGGCCCCCATCCAAATCATGCCTaGATTGTAGACAAGGTGCAGCACATTCTCGGCAAT +
Preference number: 6 (lower is better)
Translates to: TRREEGPHPNHA*IVDKVQHILGN
Trigger: ATTGCCGAGAATGTGCTGCACCTTGTCTACAATCAAGGCATGATTTGGATGGGGGCCTTCTTCTCTCCGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 90 bp TCTTGCTGCTTTCCTCATGAGTCTGGATTCGAGCTTGGAGAGTCTTaGGCTTTGAATTTTCACTCGACTCTGCTTCAGTGGCTGAGCCTG +
Preference number: 6 (lower is better)
Translates to: SCCFPHESGFELGES*ALNFHSTLLQWLSL
Trigger: CAGGCTCAGCCACTGAAGCAGAGTCGAGTGAAAATTCAAAGCCAAAGACTCTCCAAGCTCGAATCCAGACTCATGAGGAAAGCAGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS TCA 72 bp TCTCGGACACGATGTCATAAATTTTCTCTTGTCCGCTaGAGGGACCACAGTTCAGAGACGGCTTGTAGTGGA +
Preference number: 6 (lower is better)
Translates to: SRTRCHKFSLVR*RDHSSETACSG
Trigger: TCCACTACAAGCCGTCTCTGAACTGTGGTCCCTTCAGCGGACAAGAGAAAATTTATGACATCGTGTCCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 72 bp CTGGCATCGCTAGGGATGGCTAGGGCCTCTACCATTTaGGCAACCTTTTTCTTATCTTCAGATCTCGCATTT +
Preference number: 6 (lower is better)
Translates to: LASLGMARASTI*ATFFLSSDLAF
Trigger: AAATGCGAGATCTGAAGATAAGAAAAAGGTTGCCCAAATGGTAGAGGCCCTAGCCATCCCTAGCGATGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS CCA 72 bp TTGTTTGGGGATGTTGCCATATACACTGAGGACAGCTaGCTGATAAGGTCGCTGTCCTTTAGAAGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: LFGDVAIYTEDS*LIRSLSFRSLL
Trigger: CAAGAGGCTTCTAAAGGACAGCGACCTTATCAGCCAGCTGTCCTCAGTGTATATGGCAACATCCCCAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 72 bp CATGAGTCTGGATTCGAGCTTGGAGAGTCTTTGGCTTaGAATTTTCACTCGACTCTGCTTCAGTGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: HESGFELGESLA*NFHSTLLQWLS
Trigger: GCTCAGCCACTGAAGCAGAGTCGAGTGAAAATTCAAAGCCAAAGACTCTCCAAGCTCGAATCCAGACTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039317.14
CDS CAA 90 bp GAAGTCATTCTCTATCGTCTCGGACACGATGTCATAAATTTTCTCTaGTCCGCTGAAGGGACCACAGTTCAGAGACGGCTTGTAGTGGAC +
Preference number: 6 (lower is better)
Translates to: EVILYRLGHDVINFL*SAEGTTVQRRLVVD
Trigger: GTCCACTACAAGCCGTCTCTGAACTGTGGTCCCTTCAGCGGACAAGAGAAAATTTATGACATCGTGTCCGAGACGATAGAGAATGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 90 bp CTGAGGCTCTTGCTACTCAGAGAGTCGAAGTTAAGCATATGGCCATaGTTTGGGGATGTTGCCATATACACTGAGGACAGCTGGCTGATA +
Preference number: 6 (lower is better)
Translates to: LRLLLLRESKLSIWP*FGDVAIYTEDSWLI
Trigger: TATCAGCCAGCTGTCCTCAGTGTATATGGCAACATCCCCAAACAATGGCCATATGCTTAACTTCGACTCTCTGAGTAGCAAGAGCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 72 bp TGGCAAAAATGGTGGGCAGCATGCAAAGGAACAACATaGACAGGAGCATTGCCAGGTAGAAGTTGTTGGATC +
Preference number: 6 (lower is better)
Translates to: WQKWWAACKGTT*TGALPGRSCWI
Trigger: GATCCAACAACTTCTACCTGGCAATGCTCCTGTTCATGTTGTTCCTTTGCATGCTGCCCACCATTTTTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 72 bp CTGCATGTAGGGCACTGTCTTGTTGGCCTTTGTATGTaGCGTGATAGAAGTCAGAAAGCTTGTCTCTTCTAC +
Preference number: 6 (lower is better)
Translates to: LHVGHCLVGLCM*RDRSQKACLFY
Trigger: GTAGAAGAGACAAGCTTTCTGACTTCTATCACGCCACATACAAAGGCCAACAAGACAGTGCCCTACATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CCA 72 bp TGGGCAACCTTTTTCTTATCTTCAGATCTCGCATTTTaGATCTGCATCCTGAGTTGCTGGCTGCTGAGCTTG +
Preference number: 6 (lower is better)
Translates to: WATFFLSSDLAF*ICILSCWLLSL
Trigger: CAAGCTCAGCAGCCAGCAACTCAGGATGCAGATCCAAAATGCGAGATCTGAAGATAAGAAAAAGGTTGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 72 bp GACATGACATGCAGGTATTGGTCATTGTTGCTGTTTTaGTGGTCACTGCTGGATGCTGCTGACACAGAATCA +
Preference number: 6 (lower is better)
Translates to: DMTCRYWSLLLF*WSLLDAADTES
Trigger: TGATTCTGTGTCAGCAGCATCCAGCAGTGACCATCAAAACAGCAACAATGACCAATACCTGCATGTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS GCA 72 bp TTTCTGCCCCATGGTCCAGGGTCTGCAGCGGATATTTaGCATGAGATCTTTCTGAAACTGTATATTCTGGAA +
Preference number: 6 (lower is better)
Translates to: FLPHGPGSAADI*HEIFLKLYILE
Trigger: TTCCAGAATATACAGTTTCAGAAAGATCTCATGGCAAATATCCGCTGCAGACCCTGGACCATGGGGCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 72 bp TTGCTACTCAGAGAGTCGAAGTTAAGCATATGGCCATaGTTTGGGGATGTTGCCATATACACTGAGGACAGC +
Preference number: 6 (lower is better)
Translates to: LLLRESKLSIWP*FGDVAIYTEDS
Trigger: GCTGTCCTCAGTGTATATGGCAACATCCCCAAACAATGGCCATATGCTTAACTTCGACTCTCTGAGTAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS TCA 72 bp CCTTCGCTGGTATTTAGGGTCTCTGGTGTTATTTTCTaGTCTGTCACCAGTGTAAAAACAAGAAGACCGAGG +
Preference number: 6 (lower is better)
Translates to: PSLVFRVSGVIF*SVTSVKTRRPR
Trigger: CCTCGGTCTTCTTGTTTTTACACTGGTGACAGATCAGAAAATAACACCAGAGACCCTAAATACCAGCGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS GCA 72 bp ACCTTTTTCTTATCTTCAGATCTCGCATTTTGGATCTaGATCCTGAGTTGCTGGCTGCTGAGCTTGAGTGAT +
Preference number: 6 (lower is better)
Translates to: TFFLSSDLAFWI*ILSCWLLSLSD
Trigger: ATCACTCAAGCTCAGCAGCCAGCAACTCAGGATGCAGATCCAAAATGCGAGATCTGAAGATAAGAAAAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS GCA 72 bp AGCTCTACAATGTCACCTAAAGCATCTATCTTGAAATaGCTTTCTGGCCAGAAAGCTCGGTGGGTCTTTTTG +
Preference number: 6 (lower is better)
Translates to: SSTMSPKASILK*LSGQKARWVFL
Trigger: CAAAAAGACCCACCGAGCTTTCTGGCCAGAAAGGCATTTCAAGATAGATGCTTTAGGTGACATTGTAGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 72 bp GCTTTCCTCATGAGTCTGGATTCGAGCCTCTACCATTaGGGCAACCTTTTTCTTATCTTCAGATCTCGCATT +
Preference number: 6 (lower is better)
Translates to: AFLMSLDSSLYH*GNLFLIFRSRI
Trigger: AATGCGAGATCTGAAGATAAGAAAAAGGTTGCCCAAATGGTAGAGGCTCGAATCCAGACTCATGAGGAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164944.2
CDS CAA 72 bp CATGAGATCTTTCTGAAACTGTATATTCTGGAAGATTaGTTCCGGATCACTGCTGTCTCCCGTTTCATCAGC +
Preference number: 6 (lower is better)
Translates to: HEIFLKLYILED*FRITAVSRFIS
Trigger: GCTGATGAAACGGGAGACAGCAGTGATCCGGAACAAATCTTCCAGAATATACAGTTTCAGAAAGATCTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2
CDS CAA 90 bp GATATTTGCCATGAGATCTTTCTGAAACTGTATATTCTGGAAGATTaGTTCCGGATCACTGCTGTCTCCCGTTTCATCAGCATTAAAGCT +
Preference number: 6 (lower is better)
Translates to: DICHEIFLKLYILED*FRITAVSRFISIKA
Trigger: AGCTTTAATGCTGATGAAACGGGAGACAGCAGTGATCCGGAACAAATCTTCCAGAATATACAGTTTCAGAAAGATCTCATGGCAAATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039317.14
ENSMUST00000164944.2