Pregenerated sensors for TMC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060332Ensembl transcript IDs: ENSMUST00000077988.8, ENSMUST00000166774.3
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTaGGGTCCATTGCTCTTCCCTTTAGGTAGTAATCAAGGGCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: IPASSSLEPKETASV*GPLLFPLGSNQGLE Trigger: TTCCAGCCCTTGATTACTACCTAAAGGGAAGAGCAATGGACCTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGTAGTAATCAAGGGCTaGAAGCAAGGATTAAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: MASSLPPQVWSQRKPLVCVVIKG*KQGLKF Trigger: GAACTTTAATCCTTGCTTCCAGCCCTTGATTACTAC...ACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGGCTCGGTGCCCGTCTTaGGGACATGCAGCTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: ASSLPPQVWSQRKPLVCEARCPS*GHAALE Trigger: CTCCAGAGCTGCATGTCCCCAAGACGGGCACCGAGC...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR TCA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGAGGGTGGGAGAGACATaGCGGTGTAGGCCACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: ASSLPPQVWSQRKPLVCERVGET*RCRPQA Trigger: TGCCTGTGGCCTACACCGTCATGTCTCTCCCACCCT...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR GCA 90 bp | ATGGCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGGTGTGGGGGCCCTaGGCTTTCTTGTCCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: MASSLPPQVWSQRKPLVCEVWGP*AFLSRV Trigger: GACCCTGGACAAGAAAGCGCAGGGCCCCCACACCTC...ACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGTGCAGGGTGTGGTGGTaGCCGGGGCACACTCTCATT | + |
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Preference number: 4 (lower is better) Translates to: ASSLPPQVWSQRKPLVCECRVWW*PGHTLI Trigger: AATGAGAGTGTGCCCCGGCCACCACCACACCCTGCA...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR TCA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGACCTGTTCCAGGATCTaGGCCAGCTCCTCCTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: ASSLPPQVWSQRKPLVCETCSRI*ASSSSD Trigger: GTCTGAGGAGGAGCTGGCTCAGATCCTGGAACAGGT...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGCCTCTCCACCTTTCGTaGTTTCTGTCCCTGCAACCC | + |
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Preference number: 4 (lower is better) Translates to: ASSLPPQVWSQRKPLVCEPLHLS*FLSLQP Trigger: GGGTTGCAGGGACAGAAACCACGAAAGGTGGAGAGG...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGGGGGACATGCAGCTCTaGAGGTTTGTTTCCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: ASSLPPQVWSQRKPLVCEGDMQL*RFVSLW Trigger: CCACAAGGAAACAAACCTCCAGAGCTGCATGTCCCC...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGTCTCCAAGGCAGCGATaGTTTCAAACAGAGGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: ASSLPPQVWSQRKPLVCESPRQR*FQTEGD Trigger: GTCCCCCTCTGTTTGAAACCATCGCTGCCTTGGAGA...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGACCTCAGCCATCCAATaGTCCGCTGGTTGTTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: ASSLPPQVWSQRKPLVCETSAIQ*SAGCCS Trigger: ACTACAACAACCAGCGGACCATTGGATGGCTGAGGT...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | ATGGCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTAGCACTGGAAGTACATaGAGGTCAACAGGCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: MASSLPPQVWSQRKPLVCSTGST*RSTGAG Trigger: TCCTGCGCCTGTTGACCTCCATGTACTTCCAGTGCT...ACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGTGGAATGATCAGGCCTaGGTTGGCAAGGAACGCAAA | + |
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Preference number: 4 (lower is better) Translates to: ASSLPPQVWSQRKPLVCEWNDQA*VGKERK Trigger: TTTGCGTTCCTTGCCAACCCAGGCCTGATCATTCCA...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | ATGGCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGGCACCGTCTTTCTaGGTATACTTCCATAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: MASSLPPQVWSQRKPLVCEAPSF*VYFHRA Trigger: TGCCCTATGGAAGTATACCCAGAAAGACGGTGCCTC...ACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR TCA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGTCCATCGGAGAAAGATaGAGTAAGATGCCACAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ASSLPPQVWSQRKPLVCESIGER*SKMPQK Trigger: CTTCTGTGGCATCTTACTTCATCTTTCTCCGATGGA...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR TCA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGATTTGGCTGGAAGAGTaGGATGTGGGCTCTTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: ASSLPPQVWSQRKPLVCEIWLEE*DVGSSL Trigger: TAAAGAAGAGCCCACATCTCACTCTTCCAGCCAAAT...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGTTCTCGATGGTCTCATaGAGGACATCGTACATTCTG | + |
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Preference number: 4 (lower is better) Translates to: ASSLPPQVWSQRKPLVCEFSMVS*RTSYIL Trigger: CAGAATGTACGATGTCCTCCATGAGACCATCGAGAA...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR TCA 90 bp | ATGGCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTACAGAAGAACCGAAGTaGCTTTCAATGTCCTTGATC | + |
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Preference number: 4 (lower is better) Translates to: MASSLPPQVWSQRKPLVCTEEPK*LSMSLI Trigger: GATCAAGGACATTGAAAGTCACTTCGGTTCTTCTGT...ACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | CCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTACATCCCCACCCTCAGTACTaGAGGTGTGGGGGCCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: PLGSNQGLEARIKVHMLHPHPQY*RCGGPA Trigger: CGCAGGGCCCCCACACCTCCAGTACTGAGGGTGGGG...ATGTAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR TCA 90 bp | GAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATGAATGCGCAGGATGGCTGGAATaGTCAGGCCTGGGTTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: EIYKTVEIQAKDWDTHECAGWLE*SGLGWQ Trigger: TTGCCAACCCAGGCCTGATCATTCCAGCCATCCTGC...GCATTCATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR TCA 90 bp | ATGGCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTTTTTGGAGCTGTTCTTaGTTGTGTCCTCTGAATATG | + |
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Preference number: 4 (lower is better) Translates to: MASSLPPQVWSQRKPLVCFWSCS*LCPLNM Trigger: CATATTCAGAGGACACAATCAAGAACAGCTCCAAAA...ACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR GCA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATTCTCAGCTGCTTGCCTaGCTCCTTCCTCAGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: REEIYKTVEIQAKDWDTHSQLLA*LLPQSL Trigger: GAGGCTCTGAGGAAGGAGGCAGGCAAGCAGCTGAGA...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR GCA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATAAGATGCGGCCCAGCTaGCACTTCAGCCCAGTTCGT | + |
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Preference number: 4 (lower is better) Translates to: REEIYKTVEIQAKDWDTHKMRPS*HFSPVR Trigger: ACGAACTGGGCTGAAGTGGCAGCTGGGCCGCATCTT...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR GCA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATGTTCGTGGGGAACGTTaGTGCTCATCACTGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: REEIYKTVEIQAKDWDTHVRGER*CSSLPS Trigger: GCTGGGCAGTGATGAGCAGCAACGTTCCCCACGAAC...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | GAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATGAATGCCACTGTCCCCCTCACTaGTGCTACCCTGGGTATTGC | + |
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Preference number: 4 (lower is better) Translates to: EIYKTVEIQAKDWDTHECHCPPH*CYPGYC Trigger: GCAATACCCAGGGTAGCACCAGTGAGGGGGACAGTG...GCATTCATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR TCA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATTGTGGGTCTCCTTGCTaGCTTGTCACCTTCCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: REEIYKTVEIQAKDWDTHCGSPC*LVTFLV Trigger: GACGAGGAAGGTGACAAGTCAGCAAGGAGACCCACA...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR GCA 90 bp | CCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTACATACCTCTGGGCACATCTaGAGGGTGTGGTGGTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PLGSNQGLEARIKVHMLHTSGHI*RVWWWP Trigger: CGGCCACCACCACACCCTGCAGATGTGCCCAGAGGT...ATGTAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATTCACTGGTGCTACCCTaGGTATTGCTGGCCATCGAC | + |
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Preference number: 4 (lower is better) Translates to: REEIYKTVEIQAKDWDTHSLVLP*VLLAID Trigger: GTCGATGGCCAGCAATACCCAGGGTAGCACCAGTGA...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTACACATCTGCAGGGTGTaGTGGTGGCCGGGGCACACT | + |
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Preference number: 4 (lower is better) Translates to: FPLGSNQGLEARIKVHMLHICRV*WWPGHT Trigger: AGTGTGCCCCGGCCACCACCACACCCTGCAGATGTG...TAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR TCA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATACAGACAGCAGAGAATaGGAAAGTTGGCCAGGACGC | + |
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Preference number: 4 (lower is better) Translates to: REEIYKTVEIQAKDWDTHTDSRE*ESWPGR Trigger: GCGTCCTGGCCAACTTTCTCATTCTCTGCTGTCTGT...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | GAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATGAATGCTTCTCCACAAAGGCTTaGGCTTCCCTGAGTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: EIYKTVEIQAKDWDTHECFSTKA*ASLSSL Trigger: GAGGGAACTCAGGGAAGCCCAAGCCTTTGTGGAGAA...GCATTCATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | CCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTACATCTTCCGGGAAGACCCTaGTCTTGGGCTACCCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: PLGSNQGLEARIKVHMLHLPGRP*SWATLS Trigger: GCTAAGGGTAGCCCAAGACCAGGGTCTTCCCGGAAG...ATGTAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR TCA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATTCCCAACACCAGCAGTaGTTCATGAACCGGACAAAA | + |
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Preference number: 4 (lower is better) Translates to: REEIYKTVEIQAKDWDTHSQHQQ*FMNRTK Trigger: TTTTGTCCGGTTCATGAATCACTGCTGGTGTTGGGA...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR GCA 90 bp | CCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTACATCTGGGTTTTCTCAGCTaGTTGCCTGCCTCCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PLGSNQGLEARIKVHMLHLGFLS*LPASFL Trigger: GAGGAAGGAGGCAGGCAAGCAGCTGAGAAAACCCAG...ATGTAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR GCA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATTTCCAGAAGGTGACCTaGCTGTGTAAGTCTGAGACT | + |
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Preference number: 4 (lower is better) Translates to: REEIYKTVEIQAKDWDTHFQKVT*LCKSET Trigger: AGTCTCAGACTTACACAGGCAGGTCACCTTCTGGAA...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | CCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTACATGATGCCCACCAGTCCTaGAGCATAGAAGGAGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: PLGSNQGLEARIKVHMLHDAHQS*SIEGAH Trigger: ATGGGCTCCTTCTATGCTCCAGGACTGGTGGGCATC...ATGTAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR GCA 90 bp | TTCCCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTATACTTCCATAGGGCATaGCCATCAGCACCTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: FPLGSNQGLEARIKVHMLYFHRA*PSAPLG Trigger: TCCCAGAGGTGCTGATGGGCATGCCCTATGGAAGTA...TAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTACCAAGGAAGTGGACCTaGGTTTTCTCAGCTGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: FPLGSNQGLEARIKVHMLPRKWT*VFSAAC Trigger: GCAAGCAGCTGAGAAAACCCAGGTCCACTTCCTTGG...TAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTATGGAGCCCAAGGAAGTaGACCTGGGTTTTCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FPLGSNQGLEARIKVHMLWSPRK*TWVFSA Trigger: AGCTGAGAAAACCCAGGTCCACTTCCTTGGGCTCCA...TAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATATTTTGGAGAACTCCTaGGACCGTTTCACCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: REEIYKTVEIQAKDWDTHILENS*DRFTTK Trigger: CTTTGTGGTGAAACGGTCCCAGGAGTTCTCCAAAAT...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR TCA 90 bp | CCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTACATTCTCTTTCCAGAAGGTaGCCTGCCTGTGTAAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: PLGSNQGLEARIKVHMLHSLSRR*PACVSL Trigger: CAGACTTACACAGGCAGGTCACCTTCTGGAAAGAGA...ATGTAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTACTCCCTCTCCTTCTTTaGAGATGCTCTCTGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: FPLGSNQGLEARIKVHMLLPLLL*RCSLLL Trigger: AAGGAGCAGAGAGCATCTCCAAAGAAGGAGAGGGAG...TAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATATCTTCTTTCGCAGCTaGGCATTAGCTCTAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: REEIYKTVEIQAKDWDTHIFFRS*ALALER Trigger: TCTTTCTAGAGCTAATGCCCAGCTGCGAAAGAAGAT...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CCA 90 bp | GAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATGAATGCCCCTTGATGGATTTATaGTTCTTCTCAACTTCACGG | + |
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Preference number: 4 (lower is better) Translates to: EIYKTVEIQAKDWDTHECPLMDL*FFSTSR Trigger: CCGTGAAGTTGAGAAGAACCATAAATCCATCAAGGG...GCATTCATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR TCA 90 bp | TTCCCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTATCACCACAAAGTAAATaGGGTACCCGCTTCCACACA | + |
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Preference number: 4 (lower is better) Translates to: FPLGSNQGLEARIKVHMLSPQSK*GTRFHT Trigger: TGTGTGGAAGCGGGTACCTCATTTACTTTGTGGTGA...TAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR TCA 90 bp | TTCCCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTAACCAGCAGTGATTCATaGACCGGACAAAACAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FPLGSNQGLEARIKVHMLTSSDS*TGQNKL Trigger: GAGCTTGTTTTGTCCGGTTCATGAATCACTGCTGGT...TAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR TCA 90 bp | GAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATGAATGCAGATCATTCCTTGGTTaGAGATCAAACCCAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: EIYKTVEIQAKDWDTHECRSFLG*RSNPTH Trigger: ATGTGTTGGGTTTGATCTTCAACCAAGGAATGATCT...GCATTCATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATCTTGATTGTGTCCTCTaGATATGTGACTATGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: REEIYKTVEIQAKDWDTHLDCVL*ICDYGF Trigger: AAAGCCATAGTCACATATTCAGAGGACACAATCAAG...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTACATCTCCTTCTTTGGAGATaGTCTCTGCTCCTTAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLGSNQGLEARIKVHMLHLLLWR*SLLLKG Trigger: TCCCTTAAGGAGCAGAGAGCATCTCCAAAGAAGGAG...ATGTAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATATCCAGATCATTCCTTaGTTGAAGATCAAACCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: REEIYKTVEIQAKDWDTHIQIIP*LKIKPN Trigger: GTTGGGTTTGATCTTCAACCAAGGAATGATCTGGAT...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTACATTTAAACACACGTTCGTaGGGAACGTTGCTGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLGSNQGLEARIKVHMLHLNTRS*GTLLLI Trigger: GATGAGCAGCAACGTTCCCCACGAACGTGTGTTTAA...ATGTAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTAGGAAATCGTTCTCGATaGTCTCATGGAGGACATCGT | + |
|
Preference number: 4 (lower is better) Translates to: FPLGSNQGLEARIKVHMLGNRSR*SHGGHR Trigger: ACGATGTCCTCCATGAGACCATCGAGAACGATTTCC...TAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATTTAGTAAGATGTATCTaGGTGGCATTTTTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: REEIYKTVEIQAKDWDTHLVRCI*VAFLEL Trigger: CAGCTCCAAAAATGCCACCCAGATACATCTTACTAA...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR TCA 90 bp | GAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATGAATGCACTCTCATTCCCACCTaGGGAATTGTAATAGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: EIYKTVEIQAKDWDTHECTLIPT*GIVIVK Trigger: TTTAACTATTACAATTCCTCAGGTGGGAATGAGAGT...GCATTCATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTAAGGTTTGTTTCCTTGTaGGTCTCCTTGCTGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FPLGSNQGLEARIKVHMLRFVSL*VSLLTC Trigger: ACAAGTCAGCAAGGAGACCCACAAGGAAACAAACCT...TAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR CCA 90 bp | GAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATGAATGCAGGAATCTTGTCAGGTaGATATTCCCTTCTTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: EIYKTVEIQAKDWDTHECRNLVR*IFPSLL Trigger: TAACAAAGAAGGGAATATCCACCTGACAAGATTCCT...GCATTCATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTACATGACTTTCAATGTCCTTaGTCTTCATTTCCCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLGSNQGLEARIKVHMLHDFQCP*SSFPRE Trigger: TTCCCTGGGAAATGAAGATCAAGGACATTGAAAGTC...ATGTAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTAAAAGATGAAGTAAGATaGCACAGAAGAACCGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FPLGSNQGLEARIKVHMLKDEVR*HRRTEV Trigger: CACTTCGGTTCTTCTGTGGCATCTTACTTCATCTTT...TAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTATTAAACAGGGTCCAGTaGGTGATGTTCTTGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPLGSNQGLEARIKVHMLLNRVQ*VMFLIF Trigger: AAAAATCAAGAACATCACTCACTGGACCCTGTTTAA...TAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS CCA 90 bp | TGCCAGGAGGTAGATGGCGAGGCCCCACCCTCAGTACTGGAGGTGTaGGGGCCCTGCGCTTTCTTGTCCAGGGTCTGGATTTGGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CQEVDGEAPPSVLEV*GPCAFLSRVWIWLE Trigger: TTCCAGCCAAATCCAGACCCTGGACAAGAAAGCGCAGGGCCCCCACACCTCCAGTACTGAGGGTGGGGCCTCGCCATCTACCTCCTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
||
| CDS CCA 90 bp | CCCTTAGCAGGATCCTTCCGGCTAGATTGGGCTCGGTGCCCGTCTTaGGGACATGCAGCTCTGGAGGTTTGTTTCCTTGTGGGTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLAGSFRLDWARCPS*GHAALEVCFLVGLL Trigger: AAGGAGACCCACAAGGAAACAAACCTCCAGAGCTGCATGTCCCCAAGACGGGCACCGAGCCCAATCTAGCCGGAAGGATCCTGCTAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
||
| CDS-3UTR CAA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGGCCATGGGCCAGGGTTaGTTCCTCACGGTAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ASSLPPQVWSQRKPLVCEAMGQG*FLTVVM Trigger: CATCACTACCGTGAGGAACAAACCCTGGCCCATGGC...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGGGCCCTGCGCTTTCTaGTCCAGGGTCTGGATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: MASSLPPQVWSQRKPLVCGPCAF*SRVWIW Trigger: CCAAATCCAGACCCTGGACAAGAAAGCGCAGGGCCC...ACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS GCA 90 bp | GGGCCAGGAGAAACGTGTAGAGGTTTCCCAGGAAGAGGGCAAAGATaGGGCCCAGCTGCCACTTCAGCCCAGTTCGTGGGTGATAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPGETCRGFPGRGQR*GPAATSAQFVGDNS Trigger: AGAATTATCACCCACGAACTGGGCTGAAGTGGCAGCTGGGCCGCATCTTTGCCCTCTTCCTGGGAAACCTCTACACGTTTCTCCTGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
||
| CDS CCA 90 bp | GAAGAGGGCAAAGATGCGGCCCAGCTGCCACTTCAGCCCAGTTCGTaGGTGATAATTCTCCAAGGCAGCGATGGTTTCAAACAGAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EEGKDAAQLPLQPSS*VIILQGSDGFKQRG Trigger: CCCCCTCTGTTTGAAACCATCGCTGCCTTGGAGAATTATCACCCACGAACTGGGCTGAAGTGGCAGCTGGGCCGCATCTTTGCCCTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
||
| CDS CCA 90 bp | GTACATTCTGTTTTTCCCACTGAAGGGGCCACAGTCAAACGAGGGTaGGAGAGACATGACGGTGTAGGCCACAGGCAGGAGGCTGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VHSVFPTEGATVKRG*ERHDGVGHRQEAEE Trigger: TTCCTCAGCCTCCTGCCTGTGGCCTACACCGTCATGTCTCTCCCACCCTCGTTTGACTGTGGCCCCTTCAGTGGGAAAAACAGAATGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
||
| CDS-3UTR CAA 90 bp | ATGGCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTCCTCCCTCTCCTTCTTaGGAGATGCTCTCTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MASSLPPQVWSQRKPLVCPPSPS*EMLSAP Trigger: AGGAGCAGAGAGCATCTCCAAAGAAGGAGAGGGAGG...ACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTCTTCTCCACAAAGGCTaGGGCTTCCCTGAGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: MASSLPPQVWSQRKPLVCLLHKG*GFPEFP Trigger: AGGGAACTCAGGGAAGCCCAAGCCTTTGTGGAGAAG...ACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGGGACGCGGAGGAATCTaGTCAGGTGGATATTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASSLPPQVWSQRKPLVCEGRGGI*SGGYSL Trigger: AAGGGAATATCCACCTGACAAGATTCCTCCGCGTCC...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTTCCTTGTGGGTCTCCTaGCTGACTTGTCACCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MASSLPPQVWSQRKPLVCSLWVS*LTCHLP Trigger: AGGAAGGTGACAAGTCAGCAAGGAGACCCACAAGGA...ACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS TCA 90 bp | TCGGCATATGAGGGAAAACCAGCCTCGAGGTCCCAACACCAGCAGTaGTTCATGAACCGGACAAAACAAGCTCGGAGGAAATCTCCGACC | + |
|
Preference number: 5 (lower is better) Translates to: SAYEGKPASRSQHQQ*FMNRTKQARRKSPT Trigger: GGTCGGAGATTTCCTCCGAGCTTGTTTTGTCCGGTTCATGAATCACTGCTGGTGTTGGGACCTCGAGGCTGGTTTTCCCTCATATGCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
||
| CDS GCA 90 bp | CTTCTCCACAAAGGCTTGGGCTTCCCTGAGTTCCCTCAGCTTCTTTaGCATGGGCCAGGGTTTGTTCCTCACGGTAGTGATGAGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLHKGLGFPEFPQLL*HGPGFVPHGSDELL Trigger: AAGAAGCTCATCACTACCGTGAGGAACAAACCCTGGCCCATGGCAAAGAAGCTGAGGGAACTCAGGGAAGCCCAAGCCTTTGTGGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
||
| CDS-3UTR CAA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGCAGCTGGTGAACATCTaGAAGCTGAATGTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASSLPPQVWSQRKPLVCEQLVNI*KLNVKL Trigger: CAGCTTCACATTCAGCTTCAAGATGTTCACCAGCTG...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS TCA 90 bp | ATGAGGGAAAACCAGCCTCGAGGTCCCAACACCAGCAGTGATTCATaGACCGGACAAAACAAGCTCGGAGGAAATCTCCGACCAAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: MRENQPRGPNTSSDS*TGQNKLGGNLRPRW Trigger: CCATCTTGGTCGGAGATTTCCTCCGAGCTTGTTTTGTCCGGTTCATGAATCACTGCTGGTGTTGGGACCTCGAGGCTGGTTTTCCCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
||
| CDS-3UTR CAA 90 bp | ATGGCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTCTGACATTTTGCATTTaGGAGAACTCCTGGGACCGT | + |
|
Preference number: 5 (lower is better) Translates to: MASSLPPQVWSQRKPLVCLTFCI*ENSWDR Trigger: ACGGTCCCAGGAGTTCTCCAAAATGCAAAATGTCAG...ACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS TCA 90 bp | GGGCCCTGCGCTTTCTTGTCCAGGGTCTGGATTTGGCTGGAAGAGTaGGATGTGGGCTCTTCTTTAGTAAGATGTATCTGGGTGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: GPCAFLSRVWIWLEE*DVGSSLVRCIWVAF Trigger: AAATGCCACCCAGATACATCTTACTAAAGAAGAGCCCACATCTCACTCTTCCAGCCAAATCCAGACCCTGGACAAGAAAGCGCAGGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
||
| CDS-3UTR CAA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGAAGTCCCTCTTAAACTaGACCCATTTCTTAGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: ASSLPPQVWSQRKPLVCEKSLLN*THFLAI Trigger: GATGGCTAAGAAATGGGTCAAGTTTAAGAGGGACTT...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGGTGATGGAGACATATTaGTTGTCTGCTGTCTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASSLPPQVWSQRKPLVCEVMETY*LSAVSE Trigger: TTCAGAGACAGCAGACAACAAATATGTCTCCATCAC...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS CCA 90 bp | GCCACTTCAGCCCAGTTCGTGGGTGATAATTCTCCAAGGCAGCGATaGTTTCAAACAGAGGGGGACAAAACATCCCTAGCAAAGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: ATSAQFVGDNSPRQR*FQTEGDKTSLAKTS Trigger: TGATGTCTTTGCTAGGGATGTTTTGTCCCCCTCTGTTTGAAACCATCGCTGCCTTGGAGAATTATCACCCACGAACTGGGCTGAAGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
||
| CDS-3UTR CAA 90 bp | GCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTGAGATGGAGACATATTTGTaGTCTGCTGTCTCTGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: ASSLPPQVWSQRKPLVCEMETYL*SAVSEF Trigger: GAATTCAGAGACAGCAGACAACAAATATGTCTCCAT...CTCACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTCATCCAGATCATTCCTaGGTTGAAGATCAAACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: MASSLPPQVWSQRKPLVCHPDHS*VEDQTQ Trigger: TTGGGTTTGATCTTCAACCAAGGAATGATCTGGATG...ACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS TCA 90 bp | AGTTCAGATAGTAAATGGCCAGAAACATTAGCAGGATGGCTGGAATaGTCAGGCCTGGGTTGGCAAGGAACGCAAAGATCTTGCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSDSKWPETLAGWLE*SGLGWQGTQRSCPG Trigger: TCCTGGGCAAGATCTTTGCGTTCCTTGCCAACCCAGGCCTGATCATTCCAGCCATCCTGCTAATGTTTCTGGCCATTTACTATCTGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
||
| CDS-3UTR CAA 90 bp | ATGGCCTCATCCCTGCCTCCTCAAGTCTGGAGCCAAAGGAAACCGCTAGTGTGTTTCTTTGTTACTCTCTaGTTCGTCCACTATAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: MASSLPPQVWSQRKPLVCFFVTL*FVHYRL Trigger: GAGTCTATAGTGGACGAACAAGAGAGTAACAAAGAA...ACACACTAGCGGTTTCCTTTGGCTCCAGACTTGAGGAGGCAGGGATGAGGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATAACAGGCGCAGGACATaGATGCCCACCAGTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: REEIYKTVEIQAKDWDTHNRRRT*MPTSPG Trigger: TCCAGGACTGGTGGGCATCAATGTCCTGCGCCTGTT...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS CCA 90 bp | CAGAGAATGAGAAAGTTGGCCAGGACGCGGAGGAATCTTGTCAGGTaGATATTCCCTTCTTTGTTACTCTCTTGTTCGTCCACTATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QRMRKLARTRRNLVR*IFPSLLLSCSSTID Trigger: GTCTATAGTGGACGAACAAGAGAGTAACAAAGAAGGGAATATCCACCTGACAAGATTCCTCCGCGTCCTGGCCAACTTTCTCATTCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATCAGAGAATGAGAAAGTaGGCCAGGACGCGGAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: REEIYKTVEIQAKDWDTHQRMRK*ARTRRN Trigger: ATTCCTCCGCGTCCTGGCCAACTTTCTCATTCTCTG...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
||
| CDS TCA 90 bp | CTAGCAAAGACATCACGATCTCCACCTCATTCCTTTCATACCAGCTaGCATTTTGCATTTTGGAGAACTCCTGGGACCGTTTCACCACAA | + |
|
Preference number: 5 (lower is better) Translates to: LAKTSRSPPHSFHTS*HFAFWRTPGTVSPQ Trigger: TTGTGGTGAAACGGTCCCAGGAGTTCTCCAAAATGCAAAATGTCAGCTGGTATGAAAGGAATGAGGTGGAGATCGTGATGTCTTTGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
||
| CDS TCA 90 bp | GAAGATCAAACCCAACACATTTCCACTAATATCAAACTCGGCATATaGGGGAAAACCAGCCTCGAGGTCCCAACACCAGCAGTGATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: EDQTQHISTNIKLGI*GKTSLEVPTPAVIH Trigger: ATGAATCACTGCTGGTGTTGGGACCTCGAGGCTGGTTTTCCCTCATATGCCGAGTTTGATATTAGTGGAAATGTGTTGGGTTTGATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
||
| CDS CCA 90 bp | GTGTCCTCTGAATATGTGACTATGGCTTTTCCCTTGATGGATTTATaGTTCTTCTCAACTTCACGGAGCGCTTGGATCTTCTTTCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSSEYVTMAFPLMDL*FFSTSRSAWIFFRS Trigger: GCTGCGAAAGAAGATCCAAGCGCTCCGTGAAGTTGAGAAGAACCATAAATCCATCAAGGGAAAAGCCATAGTCACATATTCAGAGGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
||
| CDS-3UTR CAA 90 bp | GAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATGAATGCAGGAACGCAAAGATCTaGCCCAGGAACTTAGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EIYKTVEIQAKDWDTHECRNAKI*PRNLGK Trigger: TTTCCCTAAGTTCCTGGGCAAGATCTTTGCGTTCCT...GCATTCATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CAA 90 bp | TTCCCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTATGCAGCTCTGGAGGTTaGTTTCCTTGTGGGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FPLGSNQGLEARIKVHMLCSSGG*FPCGSP Trigger: AGGAGACCCACAAGGAAACAAACCTCCAGAGCTGCA...TAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CAA 90 bp | AGGGAAGAGATATATAAAACAGTAGAGATTCAAGCCAAGGACTGGGACACCCATATCTGGGTGGCATTTTaGGAGCTGTTCTTGATTGTG | + |
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Preference number: 5 (lower is better) Translates to: REEIYKTVEIQAKDWDTHIWVAF*ELFLIV Trigger: CACAATCAAGAACAGCTCCAAAAATGCCACCCAGAT...ATGGGTGTCCCAGTCCTTGGCTTGAATCTCTACTGTTTTATATATCTCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CAA 90 bp | CCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTACATGTCCAGGGTCTGGATTaGGCTGGAAGAGTGAGATGT | + |
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Preference number: 5 (lower is better) Translates to: PLGSNQGLEARIKVHMLHVQGLD*AGRVRC Trigger: ACATCTCACTCTTCCAGCCAAATCCAGACCCTGGAC...ATGTAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS-3UTR CAA 90 bp | CCTTTAGGTAGTAATCAAGGGCTGGAAGCAAGGATTAAAGTTCATATGTTACATTGGAGGTTTGTTTCCTaGTGGGTCTCCTTGCTGACT | + |
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Preference number: 5 (lower is better) Translates to: PLGSNQGLEARIKVHMLHWRFVS*WVSLLT Trigger: AGTCAGCAAGGAGACCCACAAGGAAACAAACCTCCA...ATGTAACATATGAACTTTAATCCTTGCTTCCAGCCCTTGATTACTACCTAAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077988.8 |
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| CDS TCA 90 bp | ATGTATCTGGGTGGCATTTTTGGAGCTGTTCTTGATTGTGTCCTCTaGATATGTGACTATGGCTTTTCCCTTGATGGATTTATGGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: MYLGGIFGAVLDCVL*ICDYGFSLDGFMVL Trigger: AAGAACCATAAATCCATCAAGGGAAAAGCCATAGTCACATATTCAGAGGACACAATCAAGAACAGCTCCAAAAATGCCACCCAGATACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS GCA 72 bp | GAGGCCCCACCCTCAGTACTGGAGGTGTGGGGGCCCTaGGCTTTCTTGTCCAGGGTCTGGATTTGGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: EAPPSVLEVWGP*AFLSRVWIWLE Trigger: TTCCAGCCAAATCCAGACCCTGGACAAGAAAGCGCAGGGCCCCCACACCTCCAGTACTGAGGGTGGGGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CCA 72 bp | GTAGATGGCGAGGCCCCACCCTCAGTACTGGAGGTGTaGGGGCCCTGCGCTTTCTTGTCCAGGGTCTGGATT | + |
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Preference number: 6 (lower is better) Translates to: VDGEAPPSVLEV*GPCAFLSRVWI Trigger: AATCCAGACCCTGGACAAGAAAGCGCAGGGCCCCCACACCTCCAGTACTGAGGGTGGGGCCTCGCCATCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS GCA 72 bp | CCGGCTAGATTGGGCTCGGTGCCCGTCTTGGGGACATaGAGCTCTGGAGGTTTGTTTCCTTGTGGGTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PARLGSVPVLGT*SSGGLFPCGSP Trigger: AGGAGACCCACAAGGAAACAAACCTCCAGAGCTGCATGTCCCCAAGACGGGCACCGAGCCCAATCTAGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 90 bp | ACCCTTAGCAGGATCCTTCCGGCTAGATTGGGCTCGGTGCCCGTCTaGGGGACATGCAGCTCTGGAGGTTTGTTTCCTTGTGGGTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: TLSRILPARLGSVPV*GTCSSGGLFPCGSP Trigger: AGGAGACCCACAAGGAAACAAACCTCCAGAGCTGCATGTCCCCAAGACGGGCACCGAGCCCAATCTAGCCGGAAGGATCCTGCTAAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CCA 72 bp | GGATCCTTCCGGCTAGATTGGGCTCGGTGCCCGTCTTaGGGACATGCAGCTCTGGAGGTTTGTTTCCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: GSFRLDWARCPS*GHAALEVCFLV Trigger: CACAAGGAAACAAACCTCCAGAGCTGCATGTCCCCAAGACGGGCACCGAGCCCAATCTAGCCGGAAGGATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CCA 72 bp | GTTTTTCCCACTGAAGGGGCCACAGTCAAACGAGGGTaGGAGAGACATGACGGTGTAGGCCACAGGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VFPTEGATVKRG*ERHDGVGHRQE Trigger: CTCCTGCCTGTGGCCTACACCGTCATGTCTCTCCCACCCTCGTTTGACTGTGGCCCCTTCAGTGGGAAAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS GCA 72 bp | TGTAAGTCTGAGACTGGGGTTGGCCAGAATCTCGTCTaGCTCTCGGTGGTTGAGACCCAACATGGTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CKSETGVGQNLV*LSVVETQHGAR Trigger: CCTGGCACCATGTTGGGTCTCAACCACCGAGAGGCAGACGAGATTCTGGCCAACCCCAGTCTCAGACTTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CCA 72 bp | ATTGGGCTCGGTGCCCGTCTTGGGGACATGCAGCTCTaGAGGTTTGTTTCCTTGTGGGTCTCCTTGCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: IGLGARLGDMQL*RFVSLWVSLLT Trigger: AGTCAGCAAGGAGACCCACAAGGAAACAAACCTCCAGAGCTGCATGTCCCCAAGACGGGCACCGAGCCCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CCA 72 bp | TGGCTCGCTCTTCCTCAGCTCGAGGCACCGTCTTTCTaGGTATACTTCCATAGGGCATGCCCATCAGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: WLALPQLEAPSF*VYFHRACPSAP Trigger: AGGTGCTGATGGGCATGCCCTATGGAAGTATACCCAGAAAGACGGTGCCTCGAGCTGAGGAAGAGCGAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 72 bp | AGGATCCTTCCGGCTAGATTGGGCTCGGTGCCCGTCTaGGGGACATGCAGCTCTGGAGGTTTGTTTCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RILPARLGSVPV*GTCSSGGLFPC Trigger: ACAAGGAAACAAACCTCCAGAGCTGCATGTCCCCAAGACGGGCACCGAGCCCAATCTAGCCGGAAGGATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CCA 72 bp | GCTTCCATGTTCCATCTGTTTCTTCCGGGAAGACCCTaGTCTTGGGCTACCCTTAGCAGGATCCTTCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASMFHLFLPGRP*SWATLSRILPA Trigger: AGCCGGAAGGATCCTGCTAAGGGTAGCCCAAGACCAGGGTCTTCCCGGAAGAAACAGATGGAACATGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CCA 72 bp | GTGAAGCTGTCACTGTCCCCCTCACTGGTGCTACCCTaGGTATTGCTGGCCATCGACCTAATGACGATCATC | + |
|
Preference number: 6 (lower is better) Translates to: VKLSLSPSLVLP*VLLAIDLMTII Trigger: GATGATCGTCATTAGGTCGATGGCCAGCAATACCCAGGGTAGCACCAGTGAGGGGGACAGTGACAGCTTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 90 bp | CTTGGGGACATGCAGCTCTGGAGGTTTGTTTCCTTGTGGGTCTCCTaGCTGACTTGTCACCTTCCTCGTCCAAGCTCTTTAACTGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGDMQLWRFVSLWVS*LTCHLPRPSSLTGG Trigger: GCCCCCAGTTAAAGAGCTTGGACGAGGAAGGTGACAAGTCAGCAAGGAGACCCACAAGGAAACAAACCTCCAGAGCTGCATGTCCCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS TCA 72 bp | CTCCTTCATACTTCTCCACAAAGGCTTGGGCTTCCCTaGGTTCCCTCAGCTTCTTTGCCATGGGCCAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLHTSPQRLGLP*VPSASLPWARV Trigger: AACCCTGGCCCATGGCAAAGAAGCTGAGGGAACTCAGGGAAGCCCAAGCCTTTGTGGAGAAGTATGAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS GCA 72 bp | CTCAGAGCCTCCCTCTCCTTCTTTGGAGATGCTCTCTaGTCCTTAAGGGAAGTTCTCCGGTCCTTCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRASLSFFGDAL*SLREVLRSFFL Trigger: GAGGAAGAAGGACCGGAGAACTTCCCTTAAGGAGCAGAGAGCATCTCCAAAGAAGGAGAGGGAGGCTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS GCA 72 bp | AAAGGCTTGGGCTTCCCTGAGTTCCCTCAGCTTCTTTaGCATGGGCCAGGGTTTGTTCCTCACGGTAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: KGLGFPEFPQLL*HGPGFVPHGSD Trigger: ATCACTACCGTGAGGAACAAACCCTGGCCCATGGCAAAGAAGCTGAGGGAACTCAGGGAAGCCCAAGCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CCA 72 bp | CTTGGGGACATGCAGCTCTGGAGGTTTGTTTCCTTGTaGGTCTCCTTGCTGACTTGTCACCTTCCTCGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGDMQLWRFVSL*VSLLTCHLPRP Trigger: TGGACGAGGAAGGTGACAAGTCAGCAAGGAGACCCACAAGGAAACAAACCTCCAGAGCTGCATGTCCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CCA 72 bp | TGTAGCCCTCAAAATCCCAAAGGACAGAGAAGTCCATaGCTCGCTCTTCCTCAGCTCGAGGCACCGTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: CSPQNPKGQRSP*LALPQLEAPSF Trigger: GAAAGACGGTGCCTCGAGCTGAGGAAGAGCGAGCCATGGACTTCTCTGTCCTTTGGGATTTTGAGGGCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 72 bp | CGTCTTGGGGACATGCAGCTCTGGAGGTTTGTTTCCTaGTGGGTCTCCTTGCTGACTTGTCACCTTCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: RLGDMQLWRFVS*WVSLLTCHLPR Trigger: ACGAGGAAGGTGACAAGTCAGCAAGGAGACCCACAAGGAAACAAACCTCCAGAGCTGCATGTCCCCAAGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS TCA 72 bp | AACCAGCCTCGAGGTCCCAACACCAGCAGTGATTCATaGACCGGACAAAACAAGCTCGGAGGAAATCTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: NQPRGPNTSSDS*TGQNKLGGNLR Trigger: TCGGAGATTTCCTCCGAGCTTGTTTTGTCCGGTTCATGAATCACTGCTGGTGTTGGGACCTCGAGGCTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS TCA 72 bp | GAGGGAAAACCAGCCTCGAGGTCCCAACACCAGCAGTaGTTCATGAACCGGACAAAACAAGCTCGGAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: EGKPASRSQHQQ*FMNRTKQARRK Trigger: TTTCCTCCGAGCTTGTTTTGTCCGGTTCATGAATCACTGCTGGTGTTGGGACCTCGAGGCTGGTTTTCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CCA 72 bp | TTCCCCAAGGCTCCTTCATACTTCTCCACAAAGGCTTaGGCTTCCCTGAGTTCCCTCAGCTTCTTTGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: FPKAPSYFSTKA*ASLSSLSFFAM Trigger: CATGGCAAAGAAGCTGAGGGAACTCAGGGAAGCCCAAGCCTTTGTGGAGAAGTATGAAGGAGCCTTGGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CCA 72 bp | AGTAAGCCATGGGCAGCCTGTACCTCAGCCATCCAATaGTCCGCTGGTTGTTGTAGTAGCCATAGAAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SKPWAACTSAIQ*SAGCCSSHRRE Trigger: CTCTCTTCTATGGCTACTACAACAACCAGCGGACCATTGGATGGCTGAGGTACAGGCTGCCCATGGCTTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CCA 72 bp | AAAGATGCGGCCCAGCTGCCACTTCAGCCCAGTTCGTaGGTGATAATTCTCCAAGGCAGCGATGGTTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: KDAAQLPLQPSS*VIILQGSDGFK Trigger: TTTGAAACCATCGCTGCCTTGGAGAATTATCACCCACGAACTGGGCTGAAGTGGCAGCTGGGCCGCATCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 72 bp | CTGGAGGTTTGTTTCCTTGTGGGTCTCCTTGCTGACTaGTCACCTTCCTCGTCCAAGCTCTTTAACTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LEVCFLVGLLAD*SPSSSKLFNWG Trigger: CCCCCAGTTAAAGAGCTTGGACGAGGAAGGTGACAAGTCAGCAAGGAGACCCACAAGGAAACAAACCTCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 90 bp | ATGGCTGGAATGATCAGGCCTGGGTTGGCAAGGAACGCAAAGATCTaGCCCAGGAACTTAGGGAAATCGTTCTCGATGGTCTCATGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: MAGMIRPGLARNAKI*PRNLGKSFSMVSWR Trigger: CCTCCATGAGACCATCGAGAACGATTTCCCTAAGTTCCTGGGCAAGATCTTTGCGTTCCTTGCCAACCCAGGCCTGATCATTCCAGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 72 bp | TTTCCCCAAGGCTCCTTCATACTTCTCCACAAAGGCTaGGGCTTCCCTGAGTTCCCTCAGCTTCTTTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FPQGSFILLHKG*GFPEFPQLLCH Trigger: ATGGCAAAGAAGCTGAGGGAACTCAGGGAAGCCCAAGCCTTTGTGGAGAAGTATGAAGGAGCCTTGGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 72 bp | ATGATCAGGCCTGGGTTGGCAAGGAACGCAAAGATCTaGCCCAGGAACTTAGGGAAATCGTTCTCGATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: MIRPGLARNAKI*PRNLGKSFSMV Trigger: GACCATCGAGAACGATTTCCCTAAGTTCCTGGGCAAGATCTTTGCGTTCCTTGCCAACCCAGGCCTGATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 72 bp | ATGCAGCTCTGGAGGTTTGTTTCCTTGTGGGTCTCCTaGCTGACTTGTCACCTTCCTCGTCCAAGCTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: MQLWRFVSLWVS*LTCHLPRPSSL Trigger: TAAAGAGCTTGGACGAGGAAGGTGACAAGTCAGCAAGGAGACCCACAAGGAAACAAACCTCCAGAGCTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CCA 72 bp | AGAAAGTTGGCCAGGACGCGGAGGAATCTTGTCAGGTaGATATTCCCTTCTTTGTTACTCTCTTGTTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RKLARTRRNLVR*IFPSLLLSCSS Trigger: GGACGAACAAGAGAGTAACAAAGAAGGGAATATCCACCTGACAAGATTCCTCCGCGTCCTGGCCAACTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 90 bp | GCGGAGGAATCTTGTCAGGTGGATATTCCCTTCTTTGTTACTCTCTaGTTCGTCCACTATAGACTCCTTGAAGCTGGTAGTGATGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: AEESCQVDIPFFVTL*FVHYRLLEAGSDGD Trigger: GTCTCCATCACTACCAGCTTCAAGGAGTCTATAGTGGACGAACAAGAGAGTAACAAAGAAGGGAATATCCACCTGACAAGATTCCTCCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS TCA 72 bp | GCTTTCTTGTCCAGGGTCTGGATTTGGCTGGAAGAGTaGGATGTGGGCTCTTCTTTAGTAAGATGTATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AFLSRVWIWLEE*DVGSSLVRCIW Trigger: CCAGATACATCTTACTAAAGAAGAGCCCACATCTCACTCTTCCAGCCAAATCCAGACCCTGGACAAGAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 72 bp | ACGCGGAGGAATCTTGTCAGGTGGATATTCCCTTCTTaGTTACTCTCTTGTTCGTCCACTATAGACTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TRRNLVRWIFPS*LLSCSSTIDSL Trigger: CAAGGAGTCTATAGTGGACGAACAAGAGAGTAACAAAGAAGGGAATATCCACCTGACAAGATTCCTCCGCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 90 bp | CTGTTCTTGATTGTGTCCTCTGAATATGTGACTATGGCTTTTCCCTaGATGGATTTATGGTTCTTCTCAACTTCACGGAGCGCTTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: LFLIVSSEYVTMAFP*MDLWFFSTSRSAWI Trigger: GATCCAAGCGCTCCGTGAAGTTGAGAAGAACCATAAATCCATCAAGGGAAAAGCCATAGTCACATATTCAGAGGACACAATCAAGAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 72 bp | TCTTGTCAGGTGGATATTCCCTTCTTTGTTACTCTCTaGTTCGTCCACTATAGACTCCTTGAAGCTGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: SCQVDIPFFVTL*FVHYRLLEAGS Trigger: ACTACCAGCTTCAAGGAGTCTATAGTGGACGAACAAGAGAGTAACAAAGAAGGGAATATCCACCTGACAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS TCA 72 bp | GGTTGTTGTAGTAGCCATAGAAGAGAGCAGAATATTTaGTGTAGCCCTCAAAATCCCAAAGGACAGAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GCCSSHRREQNI*CSPQNPKGQRS Trigger: ACTTCTCTGTCCTTTGGGATTTTGAGGGCTACATCAAATATTCTGCTCTCTTCTATGGCTACTACAACAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 72 bp | GGCTCTTCTTTAGTAAGATGTATCTGGGTGGCATTTTaGGAGCTGTTCTTGATTGTGTCCTCTGAATATGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSSLVRCIWVAF*ELFLIVSSEYV Trigger: CACATATTCAGAGGACACAATCAAGAACAGCTCCAAAAATGCCACCCAGATACATCTTACTAAAGAAGAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 90 bp | ATATTCCCTTCTTTGTTACTCTCTTGTTCGTCCACTATAGACTCCTaGAAGCTGGTAGTGATGGAGACATATTTGTTGTCTGCTGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: IFPSLLLSCSSTIDS*KLVVMETYLLSAVS Trigger: AGAGACAGCAGACAACAAATATGTCTCCATCACTACCAGCTTCAAGGAGTCTATAGTGGACGAACAAGAGAGTAACAAAGAAGGGAATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 90 bp | TCTTCTTTAGTAAGATGTATCTGGGTGGCATTTTTGGAGCTGTTCTaGATTGTGTCCTCTGAATATGTGACTATGGCTTTTCCCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SSLVRCIWVAFLELF*IVSSEYVTMAFPLM Trigger: CATCAAGGGAAAAGCCATAGTCACATATTCAGAGGACACAATCAAGAACAGCTCCAAAAATGCCACCCAGATACATCTTACTAAAGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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| CDS CAA 72 bp | TCTTTGTTACTCTCTTGTTCGTCCACTATAGACTCCTaGAAGCTGGTAGTGATGGAGACATATTTGTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLLLSCSSTIDS*KLVVMETYLLS Trigger: AGACAACAAATATGTCTCCATCACTACCAGCTTCAAGGAGTCTATAGTGGACGAACAAGAGAGTAACAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077988.8 ENSMUST00000166774.3 |
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