Pregenerated sensors for TMC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024749Ensembl transcript IDs: ENSMUST00000039500.4, ENSMUST00000236437.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACAAGATTCTAAGGAATGCGGTTAGGAGAGTGACTGGGACTAGTTaGCAATCTGGACAAGGTAATTGGAAGAACCGAGTCAGGAATTGG | + |
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Preference number: 1 (lower is better) Translates to: YKILRNAVRRVTGTS*QSGQGNWKNRVRNW Trigger: CCAATTCCTGACTCGGTTCTTCCAATTACCTTGTCCAGATTGGCAACTAGTCCCAGTCACTCTCCTAACCGCATTCCTTAGAATCTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR TCA 90 bp | CTAAGTTCAGGAAAGATTAGCATTGAGCTTTCAGCAAGGAGACTCTaGCTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCA | + |
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Preference number: 1 (lower is better) Translates to: LSSGKISIELSARRL*LDSTRLCCLLLLNS Trigger: TGAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTTGCTGAAAGCTCAATGCTAATCTTTCCTGAACTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR TCA 90 bp | GAGAGAGAGAGAGAGAGTCAGAATCTTGAAAAATCCATAATATGGTaGGATTCTTCTTGCTCAAAGAGGGCTGATGATTCCTTGACAGAT | + |
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Preference number: 1 (lower is better) Translates to: ERERESQNLEKSIIW*DSSCSKRADDSLTD Trigger: ATCTGTCAAGGAATCATCAGCCCTCTTTGAGCAAGAAGAATCTCACCATATTATGGATTTTTCAAGATTCTGACTCTCTCTCTCTCTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR-3UTR TCA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGGGGCTGATGATTCCTTaGCAGATGGTCATGACTGCG | + |
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Preference number: 2 (lower is better) Translates to: NWKNRVRNWQENSMIIPWGLMIP*QMVMTA Trigger: CGCAGTCATGACCATCTGTCAAGGAATCATCAGCCC...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR-3UTR TCA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAAGGGCTGATGATTCCTTaGCAGATGGTCATGACTGCG | + |
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Preference number: 2 (lower is better) Translates to: SICLRTCQERERESQNLEGLMIP*QMVMTA Trigger: CGCAGTCATGACCATCTGTCAAGGAATCATCAGCCC...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCCGTCTAAGAATTGCATaGCTCCTCATGGTGATAAAC | + |
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Preference number: 2 (lower is better) Translates to: KETLTGQHSFMLSSSPELRLRIA*LLMVIN Trigger: GTTTATCACCATGAGGAGGCATGCAATTCTTAGACG...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCGAAACAGTAAGTGAATaGATGATCACAAGGAATGCT | + |
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Preference number: 2 (lower is better) Translates to: KETLTGQHSFMLSSSPELETVSE*MITRNA Trigger: AGCATTCCTTGTGATCATTCATTCACTTACTGTTTC...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR-3UTR CCA 90 bp | CCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTAGTGAAGAGTACTTCTaGGCACCTCCAGGACATTTG | + |
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Preference number: 2 (lower is better) Translates to: PHLNSICLRTCQERERESSEEYF*APPGHL Trigger: CAAATGTCCTGGAGGTGCCCAGAAGTACTCTTCACT...ACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAAAGTGAAGAGTACTTCTaGGCACCTCCAGGACATTTG | + |
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Preference number: 2 (lower is better) Translates to: SICLRTCQERERESQNLESEEYF*APPGHL Trigger: CAAATGTCCTGGAGGTGCCCAGAAGTACTCTTCACT...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR-3UTR TCA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAAATACAAAGACAGAAGTaGAGAGTACTTCTGGGCACC | + |
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Preference number: 2 (lower is better) Translates to: SICLRTCQERERESQNLEIQRQK*RVLLGT Trigger: GGTGCCCAGAAGTACTCTTCACTTCTGTCTTTGTAT...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR-3UTR TCA 90 bp | CACATTTCTCCTGAAAAGCCTCTTGATTTTCATACTGAATCCAGCTGCAGATACGAAACAGTAAGTGAATaGATGATCACAAGGAATGCT | + |
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Preference number: 2 (lower is better) Translates to: HISPEKPLDFHTESSCRYETVSE*MITRNA Trigger: AGCATTCCTTGTGATCATTCATTCACTTACTGTTTC...GTATCTGCAGCTGGATTCAGTATGAAAATCAAGAGGCTTTTCAGGAGAAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR CAA 90 bp | GTAATTTGTATCACTACATCACACCCACATTTAAACTCCATTTGTTaGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: VICITTSHPHLNSIC*RTCQERERESQNLE Trigger: TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGGGTGTGATGTAGTGATACAAATTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR TCA 72 bp | TCACTGGCCCTCACTCTGTCCATACAAAGACAGAAGTaGAGAGTACTTCTGGGCACCTCCAGGACATTTGAT | + |
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Preference number: 3 (lower is better) Translates to: SLALTLSIQRQK*RVLLGTSRTFD Trigger: ATCAAATGTCCTGGAGGTGCCCAGAAGTACTCTTCACTTCTGTCTTTGTATGGACAGAGTGAGGGCCAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR TCA 72 bp | GAGATTCTTCTTGCTCAAAGAGGGCTGATGATTCCTTaGCAGATGGTCATGACTGCGGCCATGATGGTGCAT | + |
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Preference number: 3 (lower is better) Translates to: EILLAQRGLMIP*QMVMTAAMMVH Trigger: ATGCACCATCATGGCCGCAGTCATGACCATCTGTCAAGGAATCATCAGCCCTCTTTGAGCAAGAAGAATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR GCA 72 bp | CTAAGGAATGCGGTTAGGAGAGTGACTGGGACTAGTTaGCAATCTGGACAAGGTAATTGGAAGAACCGAGTC | + |
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Preference number: 3 (lower is better) Translates to: LRNAVRRVTGTS*QSGQGNWKNRV Trigger: GACTCGGTTCTTCCAATTACCTTGTCCAGATTGGCAACTAGTCCCAGTCACTCTCCTAACCGCATTCCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR CCA 72 bp | GTGACTGGGACTAGTTGCCAATCTGGACAAGGTAATTaGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGT | + |
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Preference number: 3 (lower is better) Translates to: VTGTSCQSGQGN*KNRVRNWQENS Trigger: ACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATTACCTTGTCCAGATTGGCAACTAGTCCCAGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR-3UTR CAA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGAGGGCTGATGATTCCTaGACAGATGGTCATGACTGC | + |
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Preference number: 3 (lower is better) Translates to: NWKNRVRNWQENSMIIPWRADDS*TDGHDC Trigger: GCAGTCATGACCATCTGTCAAGGAATCATCAGCCCT...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCCATTTGTTTGAGAACTaGTCAGGAGAGAGAGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: KETLTGQHSFMLSSSPELHLFEN*SGERER Trigger: TCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATG...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR-3UTR CAA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAAAGGGCTGATGATTCCTaGACAGATGGTCATGACTGC | + |
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Preference number: 3 (lower is better) Translates to: SICLRTCQERERESQNLERADDS*TDGHDC Trigger: GCAGTCATGACCATCTGTCAAGGAATCATCAGCCCT...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR TCA 72 bp | GGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATaGTCATTCCATGGCCAAGAGAAGCTTAAAGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: GRTESGIGKRTV*SFHGQEKLKEK Trigger: CTTCTCTTTAAGCTTCTCTTGGCCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR CCA 72 bp | TCTGGACAAGGTAATTGGAAGAACCGAGTCAGGAATTaGCAAGAGAACAGTATGATCATTCCATGGCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: SGQGNWKNRVRN*QENSMIIPWPR Trigger: TCTTGGCCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATTACCTTGTCCAGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCTTTTTACCCAGTAATTaGTATCACTACATCACACCC | + |
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Preference number: 3 (lower is better) Translates to: KETLTGQHSFMLSSSPELFLPSN*YHYITP Trigger: GGGTGTGATGTAGTGATACAAATTACTGGGTAAAAA...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR TCA 72 bp | GACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTaGACTCATAAAGGTACAGTTCGTCTAAGAATTGCA | + |
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Preference number: 3 (lower is better) Translates to: DWTALVYAVFFS*THKGTVRLRIA Trigger: TGCAATTCTTAGACGAACTGTACCTTTATGAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR-3UTR CAA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGCATTTGTTTGAGAACTaGTCAGGAGAGAGAGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: NWKNRVRNWQENSMIIPWHLFEN*SGERER Trigger: TCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATG...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR-3UTR CAA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGTTTTTACCCAGTAATTaGTATCACTACATCACACCC | + |
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Preference number: 3 (lower is better) Translates to: NWKNRVRNWQENSMIIPWFLPSN*YHYITP Trigger: GGGTGTGATGTAGTGATACAAATTACTGGGTAAAAA...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR TCA 72 bp | ATACTGAATCCAGCTGCAGATACAAAAGTGCCGATATaGGGATTGGGTTCATGGGTAGCAAGACAAAATAAA | + |
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Preference number: 3 (lower is better) Translates to: ILNPAADTKVPI*GLGSWVARQNK Trigger: TTTATTTTGTCTTGCTACCCATGAACCCAATCCTCATATCGGCACTTTTGTATCTGCAGCTGGATTCAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR-3UTR CAA 90 bp | CACATTTCTCCTGAAAAGCCTCTTGATTTTCATACTGAATCCAGCTGCAGATACTTAAACTCCATTTGTTaGAGAACTTGTCAGGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: HISPEKPLDFHTESSCRYLNSIC*RTCQER Trigger: TCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAA...GTATCTGCAGCTGGATTCAGTATGAAAATCAAGAGGCTTTTCAGGAGAAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR TCA 72 bp | AGAGAGAGTCAGAATCTTGAAAAATCCATAATATGGTaGGATTCTTCTTGCTCAAAGAGGGCTGATGATTCC | + |
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Preference number: 3 (lower is better) Translates to: RESQNLEKSIIW*DSSCSKRADDS Trigger: GGAATCATCAGCCCTCTTTGAGCAAGAAGAATCTCACCATATTATGGATTTTTCAAGATTCTGACTCTCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR GCA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCCTGGCCACCAGCAGCTaGAGCTGCTCGAGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KETLTGQHSFMLSSSPELLATSS*SCSSRC Trigger: GCAGCGGCTCGAGCAGCTGCAGCTGCTGGTGGCCAG...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| 3UTR CAA 72 bp | TTGACAGATGGTCATGACTGCGGCCATGATGGTGCATaGGTGGTAGAGTATAGAGCAGCAGTTCACTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LTDGHDCGHDGA*VVEYRAAVHWP Trigger: GGGCCAGTGAACTGCTGCTCTATACTCTACCACCAATGCACCATCATGGCCGCAGTCATGACCATCTGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR TCA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCCGCCGTACATCCACCTaGGGAACAGGAAGTACGAGG | + |
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Preference number: 4 (lower is better) Translates to: KETLTGQHSFMLSSSPELRRTST*GTGSTR Trigger: CCTCGTACTTCCTGTTCCTCAGGTGGATGTACGGCG...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR GCA 90 bp | ACACCCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGACTGGCCACCAGCAGCTaGAGCTGCTCGAGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TPTFKLHLFENLSGERERLATSS*SCSSRC Trigger: GCAGCGGCTCGAGCAGCTGCAGCTGCTGGTGGCCAG...TCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR TCA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCTGGATCTGGAAGCTTTaGACACCCTGGCCTCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: KETLTGQHSFMLSSSPELWIWKL*TPWPRE Trigger: TTCCCGAGGCCAGGGTGTTCAAAGCTTCCAGATCCA...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR TCA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCTGGACAGGAAGAGGATaGGTAGCAGCATGCCGAGGT | + |
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Preference number: 4 (lower is better) Translates to: KETLTGQHSFMLSSSPELWTGRG*VAACRG Trigger: ACCTCGGCATGCTGCTACTCATCCTCTTCCTGTCCA...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR GCA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCCCGGGGTTAGAAAGCTaGCTCAGGATCTTCGCCATC | + |
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Preference number: 4 (lower is better) Translates to: KETLTGQHSFMLSSSPELPGLES*LRIFAI Trigger: GATGGCGAAGATCCTGAGGCAGCTTTCTAACCCCGG...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR GCA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCACCGCGAGGGACATCTaGAGGATGAACGAAAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: KETLTGQHSFMLSSSPELTARDI*RMNEKG Trigger: CCCTTTTTCGTTCATCCTGCAGATGTCCCTCGCGGT...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR TCA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCGGACGCAAGCCGCTTTaGAGTTCTCAAAATCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: KETLTGQHSFMLSSSPELGRKPL*SSQNLG Trigger: TCCGAGATTTTGAGAACTTCAAAGCGGCTTGCGTCC...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR TCA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGTGGATCTGGAAGCTTTaGACACCCTGGCCTCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: NWKNRVRNWQENSMIIPWWIWKL*TPWPRE Trigger: TTCCCGAGGCCAGGGTGTTCAAAGCTTCCAGATCCA...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR GCA 90 bp | CCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTTGGCCTCGGGAACATTaGAGCACATCACAGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PHLNSICLRTCQERERESWPREH*STSQPS Trigger: GCTGGGCTGTGATGTGCTGCAATGTTCCCGAGGCCA...ACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR CCA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGCTCCGGCTCCGGTTCTaGGTCATCCTCATTGATGAC | + |
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Preference number: 4 (lower is better) Translates to: NWKNRVRNWQENSMIIPWLRLRF*VILIDD Trigger: GTCATCAATGAGGATGACCCAGAACCGGAGCCGGAG...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR CCA 90 bp | CCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTTGCTGGGCGAACTCCTaGGATCGCTTCACAGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: PHLNSICLRTCQERERESCWANS*DRFTAQ Trigger: TTGGGCTGTGAAGCGATCCCAGGAGTTCGCCCAGCA...ACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR CCA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAAGTGTCAGGATCTTGCTaGGCGAACTCCTGGGATCGC | + |
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Preference number: 4 (lower is better) Translates to: SICLRTCQERERESQNLEVSGSC*ANSWDR Trigger: GCGATCCCAGGAGTTCGCCCAGCAAGATCCTGACAC...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR CCA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCATCCAGATCATGCCTTaGTTGAAGATCAGAGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: KETLTGQHSFMLSSSPELIQIMP*LKIRAR Trigger: CCTCGCTCTGATCTTCAACCAAGGCATGATCTGGAT...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR TCA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAATGGACAGGAAGAGGATaGGTAGCAGCATGCCGAGGT | + |
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Preference number: 4 (lower is better) Translates to: SICLRTCQERERESQNLEWTGRG*VAACRG Trigger: ACCTCGGCATGCTGCTACTCATCCTCTTCCTGTCCA...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR GCA 90 bp | ACACCCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAAGGGTGTCAGGATCTTaGTGGGCGAACTCCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: TPTFKLHLFENLSGERERRVSGS*WANSWD Trigger: ATCCCAGGAGTTCGCCCAGCAAGATCCTGACACCCT...TCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGGGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR GCA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGAGACGCACGAATTCCTaGCCCACCATTGTTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NWKNRVRNWQENSMIIPWRRTNS*PTIVSQ Trigger: CTGGGAAACAATGGTGGGGCAGGAATTCGTGCGTCT...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR GCA 90 bp | ACACCCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGACCGGGGTTAGAAAGCTaGCTCAGGATCTTCGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TPTFKLHLFENLSGERERPGLES*LRIFAI Trigger: GATGGCGAAGATCCTGAGGCAGCTTTCTAACCCCGG...TCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR GCA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAAGAGGTCCAGATTCGCTaGTTTCTGGCCCTTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SICLRTCQERERESQNLEEVQIR*FLALGS Trigger: ACTGCCAAGGGCCAGAAAGCAGCGAATCTGGACCTC...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR CCA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCAGAAATCTGATGAGGTaGATGTTCTCCTCCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KETLTGQHSFMLSSSPELRNLMR*MFSSTC Trigger: ACAGGTGGAGGAGAACATCCACCTCATCAGATTTCT...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR CCA 90 bp | ACACCCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAAAAAGGGTGCTCCTGTaGTGTTCCCAGAGAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPTFKLHLFENLSGERERKRVLL*CSQRAQ Trigger: CTGGGCTCTCTGGGAACACCACAGGAGCACCCTTTT...TCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGGGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR TCA 90 bp | ACACCCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGGGACATCTGCAGGATaGACGAAAAAGGGTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPTFKLHLFENLSGERERGTSAG*TKKGAP Trigger: AGGAGCACCCTTTTTCGTTCATCCTGCAGATGTCCC...TCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGGGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR TCA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCGTTTCATCTTCTTTTTaGGGTCCAGATTCGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KETLTGQHSFMLSSSPELVSSSF*GPDSLL Trigger: AAGCAGCGAATCTGGACCTCAAAAAGAAGATGAAAC...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR GCA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCATCTCGGAGGAATTTTaGCCATTTCTTGGCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: KETLTGQHSFMLSSSPELISEEF*PFLGHH Trigger: ATGATGGCCAAGAAATGGGCAAAATTCCTCCGAGAT...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR GCA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGGTTCTCCTCCACCTGTaGGGCTCTCTCTTCTATGAT | + |
|
Preference number: 4 (lower is better) Translates to: NWKNRVRNWQENSMIIPWVLLHL*GSLFYD Trigger: ATCATAGAAGAGAGAGCCGCACAGGTGGAGGAGAAC...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR GCA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGAGCTGCTCGAGCCGCTaGCATTTTCTTGTTTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NWKNRVRNWQENSMIIPWSCSSR*HFLVSH Trigger: ATGCGAAACAAGAAAATGGCAGCGGCTCGAGCAGCT...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS-3UTR CCA 90 bp | ACACCCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGACTTCGCCATCCAGCTTaGGAAGTCATGTTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPTFKLHLFENLSGERERLRHPA*EVMFQG Trigger: ACCCTGGAACATGACTTCCCAAGCTGGATGGCGAAG...TCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS-3UTR CCA 90 bp | CCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCTTCGCCATCCAGCTTaGGAAGTCATGTTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PHLNSICLRTCQERERESLRHPA*EVMFQG Trigger: ACCCTGGAACATGACTTCCCAAGCTGGATGGCGAAG...ACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR TCA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCGACTTTCAATTGCCTTaGTTTTGTTTTCCCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KETLTGQHSFMLSSSPELDFQLP*FCFPMG Trigger: TCCCATGGGAAAACAAAATCAAGGCAATTGAAAGTC...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR TCA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGTCACAGCCCAAAAGATaGGGTATCCACTTGCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: NWKNRVRNWQENSMIIPWSQPKR*GIHLHQ Trigger: TTGGTGCAAGTGGATACCTCATCTTTTGGGCTGTGA...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR TCA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAACGAGGACGTTGCCACTaGTGTCGAATTCTGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SICLRTCQERERESQNLERGRCH*CRILCM Trigger: CATACACAGAATTCGACATCAGTGGCAACGTCCTCG...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR TCA 90 bp | CCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCGAGGACGTTGCCACTaGTGTCGAATTCTGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: PHLNSICLRTCQERERESRGRCH*CRILCM Trigger: CATACACAGAATTCGACATCAGTGGCAACGTCCTCG...ACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR TCA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAAAGATCATGCCTTGGTTaGAGATCAGAGCGAGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: SICLRTCQERERESQNLERSCLG*RSERGR Trigger: ACGTCCTCGCTCTGATCTTCAACCAAGGCATGATCT...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR GCA 90 bp | CCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTAGCTGCTCGAGCCGCTaGCATTTTCTTGTTTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PHLNSICLRTCQERERESSCSSR*HFLVSH Trigger: ATGCGAAACAAGAAAATGGCAGCGGCTCGAGCAGCT...ACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR CCA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCTCAAGCTCTCTCTTCTaGGTAGCTTATCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KETLTGQHSFMLSSSPELSSSLF*VAYLLL Trigger: AAGAAGAAGATAAGCTACCCAGAAGAGAGAGCTTGA...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR CCA 90 bp | CACATTTCTCCTGAAAAGCCTCTTGATTTTCATACTGAATCCAGCTGCAGATACCCCACAATCAAAAGATaGCGGGAGGGAGACGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: HISPEKPLDFHTESSCRYPTIKR*REGDDH Trigger: ATGATCGTCTCCCTCCCGCCATCTTTTGATTGTGGG...GTATCTGCAGCTGGATTCAGTATGAAAATCAAGAGGCTTTTCAGGAGAAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR CCA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAAAGATTCGCTGCTTTCTaGCCCTTGGCAGTAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SICLRTCQERERESQNLERFAAF*PLAVAL Trigger: CAATGCTACTGCCAAGGGCCAGAAAGCAGCGAATCT...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR CCA 90 bp | CCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTAGATTCGCTGCTTTCTaGCCCTTGGCAGTAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PHLNSICLRTCQERERESRFAAF*PLAVAL Trigger: CAATGCTACTGCCAAGGGCCAGAAAGCAGCGAATCT...ACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR TCA 90 bp | CCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTTTTTGGTCATCGCTTTaGGGACAACCAGGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHLNSICLRTCQERERESFWSSL*GQPGSC Trigger: ACAGCTTCCTGGTTGTCCTCAAAGCGATGACCAAAA...ACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR TCA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGTCCTGTTTTTACCACTaGAGGGCCCACAATCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NWKNRVRNWQENSMIIPWSCFYH*RAHNQK Trigger: CTTTTGATTGTGGGCCCTTCAGTGGTAAAAACAGGA...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR GCA 90 bp | CACATTTCTCCTGAAAAGCCTCTTGATTTTCATACTGAATCCAGCTGCAGATACCACACCAAAGTTGGCTaGAGATGCTTCTTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HISPEKPLDFHTESSCRYHTKVG*RCFFSS Trigger: AGAGCTGAAGAAGCATCTGCAGCCAACTTTGGTGTG...GTATCTGCAGCTGGATTCAGTATGAAAATCAAGAGGCTTTTCAGGAGAAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR CCA 90 bp | ACACCCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGGTCCGTTTCCTCTTTaGTCTCAAGCTCTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPTFKLHLFENLSGERERGPFPL*SQALSS Trigger: AGAAGAGAGAGCTTGAGACCAAAGAGGAAACGGACC...TCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGGGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR CCA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGACAACACACCAAAGTTaGCTGCAGATGCTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NWKNRVRNWQENSMIIPWTTHQS*LQMLLQ Trigger: CTGAAGAAGCATCTGCAGCCAACTTTGGTGTGTTGT...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR CCA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAAATAAGTCAAACAGGGTaGGACAGAACATCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SICLRTCQERERESQNLEISQTG*DRTSPG Trigger: TCCTGGGGATGTTCTGTCCCACCCTGTTTGACTTAT...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR CCA 90 bp | CACATTTCTCCTGAAAAGCCTCTTGATTTTCATACTGAATCCAGCTGCAGATACATCCAGATCATGCCTTaGTTGAAGATCAGAGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HISPEKPLDFHTESSCRYIQIMP*LKIRAR Trigger: CCTCGCTCTGATCTTCAACCAAGGCATGATCTGGAT...GTATCTGCAGCTGGATTCAGTATGAAAATCAAGAGGCTTTTCAGGAGAAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR TCA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAATCCTGTTTTTACCACTaGAGGGCCCACAATCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SICLRTCQERERESQNLESCFYH*RAHNQK Trigger: CTTTTGATTGTGGGCCCTTCAGTGGTAAAAACAGGA...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR GCA 90 bp | CCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTAGCACCAGCAGTAATTaGAGAACCTCACGAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: PHLNSICLRTCQERERESSTSSN*RTSRNM Trigger: CATGTTTCGTGAGGTTCTGCAATTACTGCTGGTGCT...ACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| 3UTR CAA 72 bp | ATCACTACATCACACCCACATTTAAACTCCATTTGTTaGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITTSHPHLNSIC*RTCQERERESQ Trigger: CTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGGGTGTGATGTAGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR TCA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAAGTTTCATCTTCTTTTTaGGGTCCAGATTCGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SICLRTCQERERESQNLEVSSSF*GPDSLL Trigger: AAGCAGCGAATCTGGACCTCAAAAAGAAGATGAAAC...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR CCA 90 bp | ACACCCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAAAATACATGGATGTGTaGAGACGGAGGATGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TPTFKLHLFENLSGERERKYMDV*RRRMLM Trigger: CATCAACATCCTCCGTCTCCACACATCCATGTATTT...TCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGGGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR CCA 90 bp | CACATTTCTCCTGAAAAGCCTCTTGATTTTCATACTGAATCCAGCTGCAGATACAAATACATGGATGTGTaGAGACGGAGGATGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HISPEKPLDFHTESSCRYKYMDV*RRRMLM Trigger: CATCAACATCCTCCGTCTCCACACATCCATGTATTT...GTATCTGCAGCTGGATTCAGTATGAAAATCAAGAGGCTTTTCAGGAGAAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR TCA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAAACTGAGGAACCAAACTaGCTTTCAATTGCCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SICLRTCQERERESQNLETEEPN*LSIALI Trigger: AATCAAGGCAATTGAAAGTCAGTTTGGTTCCTCAGT...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR GCA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGTTGTTCTCCAAAGCTTaGTGTTTCATCTTCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NWKNRVRNWQENSMIIPWLFSKA*CFIFFL Trigger: CAAAAAGAAGATGAAACAGCAAGCTTTGGAGAACAA...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS-3UTR GCA 90 bp | CACATTTCTCCTGAAAAGCCTCTTGATTTTCATACTGAATCCAGCTGCAGATACTTGTTCTCCAAAGCTTaGTGTTTCATCTTCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HISPEKPLDFHTESSCRYLFSKA*CFIFFL Trigger: CAAAAAGAAGATGAAACAGCAAGCTTTGGAGAACAA...GTATCTGCAGCTGGATTCAGTATGAAAATCAAGAGGCTTTTCAGGAGAAATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS GCA 90 bp | TTCCTGCCCCACCATTGTTTCCCAGCAGGGACCGCGAGGGACATCTaGAGGATGAACGAAAAAGGGTGCTCCTGTGGTGTTCCCAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLPHHCFPAGTARDI*RMNEKGCSCGVPRE Trigger: CTCTCTGGGAACACCACAGGAGCACCCTTTTTCGTTCATCCTGCAGATGTCCCTCGCGGTCCCTGCTGGGAAACAATGGTGGGGCAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS GCA 90 bp | CCAGCAGGGACCGCGAGGGACATCTGCAGGATGAACGAAAAAGGGTaGTCCTGTGGTGTTCCCAGAGAGCCCAGAGAGAGATTCATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PAGTARDICRMNEKG*SCGVPREPRERFIV Trigger: TACAATGAATCTCTCTCTGGGCTCTCTGGGAACACCACAGGAGCACCCTTTTTCGTTCATCCTGCAGATGTCCCTCGCGGTCCCTGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS CCA 90 bp | TTTTCCCACCACCCAAGGGTGTCAGGATCTTGCTGGGCGAACTCCTaGGATCGCTTCACAGCCCAAAAGATGAGGTATCCACTTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: FSHHPRVSGSCWANS*DRFTAQKMRYPLAP Trigger: TGGTGCAAGTGGATACCTCATCTTTTGGGCTGTGAAGCGATCCCAGGAGTTCGCCCAGCAAGATCCTGACACCCTTGGGTGGTGGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS GCA 90 bp | ACCATCACCAGAATGACAGCAATGACAAGGCCGGGGTTAGAAAGCTaGCTCAGGATCTTCGCCATCCAGCTTGGGAAGTCATGTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TITRMTAMTRPGLES*LRIFAIQLGKSCSR Trigger: CCTGGAACATGACTTCCCAAGCTGGATGGCGAAGATCCTGAGGCAGCTTTCTAACCCCGGCCTTGTCATTGCTGTCATTCTGGTGATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS CCA 90 bp | AAGGCCGGGGTTAGAAAGCTGCCTCAGGATCTTCGCCATCCAGCTTaGGAAGTCATGTTCCAGGGTCTCACCGATGACTTCAAACATCCT | + |
|
Preference number: 5 (lower is better) Translates to: KAGVRKLPQDLRHPA*EVMFQGLTDDFKHP Trigger: AGGATGTTTGAAGTCATCGGTGAGACCCTGGAACATGACTTCCCAAGCTGGATGGCGAAGATCCTGAGGCAGCTTTCTAACCCCGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS TCA 90 bp | GAAGATCAGAGCGAGGACGTTGCCACTGATGTCGAATTCTGTGTATaGAGGCTCATAGAGAGCAATAGGAGAGCTGTGCAGGGCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EDQSEDVATDVEFCV*RLIESNRRAVQGIW Trigger: CCAGATGCCCTGCACAGCTCTCCTATTGCTCTCTATGAGCCTTCATACACAGAATTCGACATCAGTGGCAACGTCCTCGCTCTGATCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236437.2 |
||
| CDS CCA 90 bp | TTCAAACATCCTGTTTTTACCACTGAAGGGCCCACAATCAAAAGATaGCGGGAGGGAGACGATCATGTACAGGACCGGCATGGTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: FKHPVFTTEGPTIKR*REGDDHVQDRHGGQ Trigger: CTGTCCACCATGCCGGTCCTGTACATGATCGTCTCCCTCCCGCCATCTTTTGATTGTGGGCCCTTCAGTGGTAAAAACAGGATGTTTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCTTGGATCTGGAAGCTTaGAACACCCTGGCCTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KETLTGQHSFMLSSSPELLDLEA*NTLASG Trigger: TCCCGAGGCCAGGGTGTTCAAAGCTTCCAGATCCAA...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCCAGATCATGCCTTGGTaGAAGATCAGAGCGAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: KETLTGQHSFMLSSSPELQIMPW*KIRART Trigger: CGTCCTCGCTCTGATCTTCAACCAAGGCATGATCTG...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS CCA 90 bp | AGGAACACGAAGAAGTTAGCGAGAAACCTCAGAAATCTGATGAGGTaGATGTTCTCCTCCACCTGTGCGGCTCTCTCTTCTATGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RNTKKLARNLRNLMR*MFSSTCAALSSMMA Trigger: AGCCATCATAGAAGAGAGAGCCGCACAGGTGGAGGAGAACATCCACCTCATCAGATTTCTGAGGTTTCTCGCTAACTTCTTCGTGTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR CAA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCACAAAGAGAACCATGTaGACGCCGTACATCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: KETLTGQHSFMLSSSPELTKRTM*TPYIHL Trigger: CAGGTGGATGTACGGCGTCAACATGGTTCTCTTTGT...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR CAA 90 bp | CACATTTCTCCTGAAAAGCCTCTTGATTTTCATACTGAATCCAGCTGCAGATACATTCCTGCCCCACCATaGTTTCCCAGCAGGGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: HISPEKPLDFHTESSCRYIPAPP*FPSRDR Trigger: GCGGTCCCTGCTGGGAAACAATGGTGGGGCAGGAAT...GTATCTGCAGCTGGATTCAGTATGAAAATCAAGAGGCTTTTCAGGAGAAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR CAA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCATCAGAGCGAGGACGTaGCCACTGATGTCGAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: KETLTGQHSFMLSSSPELIRART*PLMSNS Trigger: AGAATTCGACATCAGTGGCAACGTCCTCGCTCTGAT...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS-3UTR CAA 90 bp | CACATTTCTCCTGAAAAGCCTCTTGATTTTCATACTGAATCCAGCTGCAGATACTGGAGACGGAGGATGTaGATGCCCGGGAGGCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HISPEKPLDFHTESSCRYWRRRM*MPGRLG Trigger: TCCTAGCCTCCCGGGCATCAACATCCTCCGTCTCCA...GTATCTGCAGCTGGATTCAGTATGAAAATCAAGAGGCTTTTCAGGAGAAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS-3UTR CAA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAATGGAGACGGAGGATGTaGATGCCCGGGAGGCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SICLRTCQERERESQNLEWRRRM*MPGRLG Trigger: TCCTAGCCTCCCGGGCATCAACATCCTCCGTCTCCA...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS TCA 90 bp | GTTGACGCCGTACATCCACCTGAGGAACAGGAAGTACGAGGCCACTaGGGAACCAAACTGACTTTCAATTGCCTTGATTTTGTTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VDAVHPPEEQEVRGH*GTKLTFNCLDFVFP Trigger: TGGGAAAACAAAATCAAGGCAATTGAAAGTCAGTTTGGTTCCTCAGTGGCCTCGTACTTCCTGTTCCTCAGGTGGATGTACGGCGTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR CAA 90 bp | CACATTTCTCCTGAAAAGCCTCTTGATTTTCATACTGAATCCAGCTGCAGATACAAGGGTGTCAGGATCTaGCTGGGCGAACTCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HISPEKPLDFHTESSCRYKGVRI*LGELLG Trigger: TCCCAGGAGTTCGCCCAGCAAGATCCTGACACCCTT...GTATCTGCAGCTGGATTCAGTATGAAAATCAAGAGGCTTTTCAGGAGAAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS TCA 90 bp | CTAGAAGAAGAGCAAAAATGCGCCCCAGGAGCCACTTCAGAGCAATaGGAGGATGGTAATCTTCCAGTTCAGCAAATAAGTCAAACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LEEEQKCAPGATSEQ*EDGNLPVQQISQTG Trigger: CCCTGTTTGACTTATTTGCTGAACTGGAAGATTACCATCCTCTCATTGCTCTGAAGTGGCTCCTGGGGCGCATTTTTGCTCTTCTTCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS GCA 90 bp | GAGAAACCTCAGAAATCTGATGAGGTGGATGTTCTCCTCCACCTGTaGGGCTCTCTCTTCTATGATGGCTTCCTTAAAGTTCATCGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EKPQKSDEVDVLLHL*GSLFYDGFLKVHRD Trigger: ATCACGATGAACTTTAAGGAAGCCATCATAGAAGAGAGAGCCGCACAGGTGGAGGAGAACATCCACCTCATCAGATTTCTGAGGTTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR CAA 90 bp | CACATTTCTCCTGAAAAGCCTCTTGATTTTCATACTGAATCCAGCTGCAGATACTTGGATCTGGAAGCTTaGAACACCCTGGCCTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HISPEKPLDFHTESSCRYLDLEA*NTLASG Trigger: TCCCGAGGCCAGGGTGTTCAAAGCTTCCAGATCCAA...GTATCTGCAGCTGGATTCAGTATGAAAATCAAGAGGCTTTTCAGGAGAAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS-3UTR CAA 90 bp | ACACCCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGATCTTCGCCATCCAGCTaGGGAAGTCATGTTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TPTFKLHLFENLSGERERSSPSS*GSHVPG Trigger: CCCTGGAACATGACTTCCCAAGCTGGATGGCGAAGA...TCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGGGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS-3UTR CAA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAATCTTCGCCATCCAGCTaGGGAAGTCATGTTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SICLRTCQERERESQNLESSPSS*GSHVPG Trigger: CCCTGGAACATGACTTCCCAAGCTGGATGGCGAAGA...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS GCA 90 bp | CTCCAAAGCTTGCTGTTTCATCTTCTTTTTGAGGTCCAGATTCGCTaGTTTCTGGCCCTTGGCAGTAGCATTGAGATAATAGATGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQSLLFHLLFEVQIR*FLALGSSIEIIDGQ Trigger: CTGACCATCTATTATCTCAATGCTACTGCCAAGGGCCAGAAAGCAGCGAATCTGGACCTCAAAAAGAAGATGAAACAGCAAGCTTTGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS-3UTR CAA 90 bp | CCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTGGGACGCAAGCCGCTTaGAAGTTCTCAAAATCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PHLNSICLRTCQERERESGTQAA*KFSKSR Trigger: CCGAGATTTTGAGAACTTCAAAGCGGCTTGCGTCCC...ACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR CAA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGCTGAAGTTGAAAGTGTaGTCATCGCCACCACCATCG | + |
|
Preference number: 5 (lower is better) Translates to: NWKNRVRNWQENSMIIPWLKLKV*SSPPPS Trigger: CGATGGTGGTGGCGATGACAACACTTTCAACTTCAG...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR CAA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAACAGATCATGCCTTGGTaGAAGATCAGAGCGAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: SICLRTCQERERESQNLEQIMPW*KIRART Trigger: CGTCCTCGCTCTGATCTTCAACCAAGGCATGATCTG...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR CAA 90 bp | AAGGAGACTCTGACTGGACAGCACTCGTTTATGCTGTCTTCTTCTCCTGAACTCTGTTTCATCTTCTTTTaGAGGTCCAGATTCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KETLTGQHSFMLSSSPELCFIFF*RSRFAA Trigger: AGCAGCGAATCTGGACCTCAAAAAGAAGATGAAACA...GAGTTCAGGAGAAGAAGACAGCATAAACGAGTGCTGTCCAGTCAGAGTCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS-3UTR CAA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAATGGTCCGTTTCCTCTTaGGTCTCAAGCTCTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SICLRTCQERERESQNLEWSVSS*VSSSLF Trigger: GAAGAGAGAGCTTGAGACCAAAGAGGAAACGGACCA...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR CAA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAATCTGGGTCATCCTCATaGATGACATCTCTGGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SICLRTCQERERESQNLESGSSS*MTSLVR Trigger: ACGGACCAGAGATGTCATCAATGAGGATGACCCAGA...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR CAA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGTTTTTGGTCATCGCTTaGAGGACAACCAGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NWKNRVRNWQENSMIIPWFLVIA*RTTRKL Trigger: CAGCTTCCTGGTTGTCCTCAAAGCGATGACCAAAAA...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR CAA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGACCTTCCAGCTGAAGTaGAAAGTGTTGTCATCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NWKNRVRNWQENSMIIPWTFQLK*KVLSSP Trigger: TGGCGATGACAACACTTTCAACTTCAGCTGGAAGGT...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR CAA 90 bp | ACACCCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAATCAGAGCGAGGACGTaGCCACTGATGTCGAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: TPTFKLHLFENLSGERERIRART*PLMSNS Trigger: AGAATTCGACATCAGTGGCAACGTCCTCGCTCTGAT...TCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS-3UTR CAA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGGTGATAGAGTTAAACTaGTTGTCGGCTGTTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NWKNRVRNWQENSMIIPWVIELN*LSAVSG Trigger: CCCTGAAACAGCCGACAACAAGTTTAACTCTATCAC...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR CAA 90 bp | CACATTTCTCCTGAAAAGCCTCTTGATTTTCATACTGAATCCAGCTGCAGATACAATCTCGGAGGAATTTaGCCCATTTCTTGGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: HISPEKPLDFHTESSCRYNLGGI*PISWPS Trigger: TGATGGCCAAGAAATGGGCAAAATTCCTCCGAGATT...GTATCTGCAGCTGGATTCAGTATGAAAATCAAGAGGCTTTTCAGGAGAAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS-3UTR CAA 90 bp | CCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTTACAACACACCAAAGTaGGCTGCAGATGCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PHLNSICLRTCQERERESYNTPK*AADASS Trigger: TGAAGAAGCATCTGCAGCCAACTTTGGTGTGTTGTA...ACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR CAA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAACTTCTTCTTCTTCACTaGAGCTTTCCTCTGTATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SICLRTCQERERESQNLELLLLH*SFPLYP Trigger: AGGATACAGAGGAAAGCTCAAGTGAAGAAGAAGAAG...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR CAA 90 bp | CACATTTCTCCTGAAAAGCCTCTTGATTTTCATACTGAATCCAGCTGCAGATACTCAATTGCCTTGATTTaGTTTTCCCATGGGACGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HISPEKPLDFHTESSCRYSIALI*FSHGTQ Trigger: TTGCGTCCCATGGGAAAACAAAATCAAGGCAATTGA...GTATCTGCAGCTGGATTCAGTATGAAAATCAAGAGGCTTTTCAGGAGAAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR CAA 90 bp | AATTGGAAGAACCGAGTCAGGAATTGGCAAGAGAACAGTATGATCATTCCATGGATAGAGTTAAACTTGTaGTCGGCTGTTTCAGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: NWKNRVRNWQENSMIIPWIELNL*SAVSGL Trigger: TAACCCTGAAACAGCCGACAACAAGTTTAACTCTAT...CCATGGAATGATCATACTGTTCTCTTGCCAATTCCTGACTCGGTTCTTCCAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR CAA 90 bp | CCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTTGTTTCATCTTCTTTTaGAGGTCCAGATTCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PHLNSICLRTCQERERESCFIFF*RSRFAA Trigger: AGCAGCGAATCTGGACCTCAAAAAGAAGATGAAACA...ACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS-3UTR CAA 90 bp | TCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTCAGAATCTTGAATTCTTGTTTCGCATTTaGTTCTCCAAAGCTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SICLRTCQERERESQNLEFLFRI*FSKACC Trigger: ACAGCAAGCTTTGGAGAACAAAATGCGAAACAAGAA...TTCAAGATTCTGACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS-3UTR CAA 90 bp | CCACATTTAAACTCCATTTGTTTGAGAACTTGTCAGGAGAGAGAGAGAGAGAGTTCCTCTTCAATCTTGTaGTTAATCTCATCCATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PHLNSICLRTCQERERESSSSIL*LISSIK Trigger: CTTGATGGATGAGATTAACAACAAGATTGAAGAGGA...ACTCTCTCTCTCTCTCTCCTGACAAGTTCTCAAACAAATGGAGTTTAAATGTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS-3UTR CAA 90 bp | CACATTTCTCCTGAAAAGCCTCTTGATTTTCATACTGAATCCAGCTGCAGATACTTCTCCTCTTCAATCTaGTTGTTAATCTCATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: HISPEKPLDFHTESSCRYFSSSI*LLISSI Trigger: GATGGATGAGATTAACAACAAGATTGAAGAGGAGAA...GTATCTGCAGCTGGATTCAGTATGAAAATCAAGAGGCTTTTCAGGAGAAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS GCA 72 bp | GTCAGGACGTCAGAAACGGTGAGACGCACGAATTCCTaGCCCACCATTGTTTCCCAGCAGGGACCGCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VRTSETVRRTNS*PTIVSQQGPRG Trigger: CCCTCGCGGTCCCTGCTGGGAAACAATGGTGGGGCAGGAATTCGTGCGTCTCACCGTTTCTGACGTCCTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS GCA 72 bp | CACCATTGTTTCCCAGCAGGGACCGCGAGGGACATCTaGAGGATGAACGAAAAAGGGTGCTCCTGTGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: HHCFPAGTARDI*RMNEKGCSCGV Trigger: AACACCACAGGAGCACCCTTTTTCGTTCATCCTGCAGATGTCCCTCGCGGTCCCTGCTGGGAAACAATGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS CCA 72 bp | CACCCAAGGGTGTCAGGATCTTGCTGGGCGAACTCCTaGGATCGCTTCACAGCCCAAAAGATGAGGTATCCA | + |
|
Preference number: 6 (lower is better) Translates to: HPRVSGSCWANS*DRFTAQKMRYP Trigger: TGGATACCTCATCTTTTGGGCTGTGAAGCGATCCCAGGAGTTCGCCCAGCAAGATCCTGACACCCTTGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS CAA 72 bp | GGAGCGAAGAAGGAGCCCATCCAGATCATGCCTTGGTaGAAGATCAGAGCGAGGACGTTGCCACTGATGTCG | + |
|
Preference number: 6 (lower is better) Translates to: GAKKEPIQIMPW*KIRARTLPLMS Trigger: CGACATCAGTGGCAACGTCCTCGCTCTGATCTTCAACCAAGGCATGATCTGGATGGGCTCCTTCTTCGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS CAA 90 bp | CTTCTTCCGCTCCTCTCCGCAGCCTCCTCCGCCTTTCTTTTTCTCTaGCCTTTCTTGTTTCTTCATCCTCCGGCTCCGGTTCTGGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LLPLLSAASSAFLFL*PFLFLHPPAPVLGH Trigger: ATGACCCAGAACCGGAGCCGGAGGATGAAGAAACAAGAAAGGCAAGAGAAAAAGAAAGGCGGAGGAGGCTGCGGAGAGGAGCGGAAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
||
| CDS GCA 72 bp | AGAATGACAGCAATGACAAGGCCGGGGTTAGAAAGCTaGCTCAGGATCTTCGCCATCCAGCTTGGGAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RMTAMTRPGLES*LRIFAIQLGKS Trigger: TGACTTCCCAAGCTGGATGGCGAAGATCCTGAGGCAGCTTTCTAACCCCGGCCTTGTCATTGCTGTCATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS CCA 72 bp | CCTGTTTTTACCACTGAAGGGCCCACAATCAAAAGATaGCGGGAGGGAGACGATCATGTACAGGACCGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PVFTTEGPTIKR*REGDDHVQDRH Trigger: ATGCCGGTCCTGTACATGATCGTCTCCCTCCCGCCATCTTTTGATTGTGGGCCCTTCAGTGGTAAAAACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS CCA 72 bp | GTTAGAAAGCTGCCTCAGGATCTTCGCCATCCAGCTTaGGAAGTCATGTTCCAGGGTCTCACCGATGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: VRKLPQDLRHPA*EVMFQGLTDDF Trigger: GAAGTCATCGGTGAGACCCTGGAACATGACTTCCCAAGCTGGATGGCGAAGATCCTGAGGCAGCTTTCTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
||
| CDS TCA 72 bp | AGCGAGGACGTTGCCACTGATGTCGAATTCTGTGTATaGAGGCTCATAGAGAGCAATAGGAGAGCTGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SEDVATDVEFCV*RLIESNRRAVQ Trigger: CTGCACAGCTCTCCTATTGCTCTCTATGAGCCTTCATACACAGAATTCGACATCAGTGGCAACGTCCTCGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236437.2 |
||
| CDS CCA 72 bp | TGCCTTTCTTGTTTCTTCATCCTCCGGCTCCGGTTCTaGGTCATCCTCATTGATGACATCTCTGGTCCGTTT | + |
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Preference number: 6 (lower is better) Translates to: CLSCFFILRLRF*VILIDDISGPF Trigger: AAACGGACCAGAGATGTCATCAATGAGGATGACCCAGAACCGGAGCCGGAGGATGAAGAAACAAGAAAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS CAA 90 bp | ACAGAGTACTGCGCCAGGCCATTGAAGTCATACAACACACCAAAGTaGGCTGCAGATGCTTCTTCAGCTCTTGGGACTGTTTTCCTAGGT | + |
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Preference number: 6 (lower is better) Translates to: TEYCARPLKSYNTPK*AADASSALGTVFLG Trigger: ACCTAGGAAAACAGTCCCAAGAGCTGAAGAAGCATCTGCAGCCAACTTTGGTGTGTTGTATGACTTCAATGGCCTGGCGCAGTACTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS TCA 72 bp | AGCCATAAAAGAGGACAGAGTACTGCGCCAGGCCATTaGAGTCATACAACACACCAAAGTTGGCTGCAGATG | + |
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Preference number: 6 (lower is better) Translates to: SHKRGQSTAPGH*SHTTHQSWLQM Trigger: CATCTGCAGCCAACTTTGGTGTGTTGTATGACTTCAATGGCCTGGCGCAGTACTCTGTCCTCTTTTATGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS CAA 72 bp | ATGATGAGGCTGAAGGTCAACACAAAGAGAACCATGTaGACGCCGTACATCCACCTGAGGAACAGGAAGTAC | + |
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Preference number: 6 (lower is better) Translates to: MMRLKVNTKRTM*TPYIHLRNRKY Trigger: GTACTTCCTGTTCCTCAGGTGGATGTACGGCGTCAACATGGTTCTCTTTGTGTTGACCTTCAGCCTCATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS CAA 90 bp | GCAGCTGCAGCTGCTCGAGCCGCTGCCATTTTCTTGTTTCGCATTTaGTTCTCCAAAGCTTGCTGTTTCATCTTCTTTTTGAGGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: AAAAARAAAIFLFRI*FSKACCFIFFLRSR Trigger: TCTGGACCTCAAAAAGAAGATGAAACAGCAAGCTTTGGAGAACAAAATGCGAAACAAGAAAATGGCAGCGGCTCGAGCAGCTGCAGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039500.4 ENSMUST00000236437.2 |
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| CDS TCA 72 bp | GAGCAAAAATGCGCCCCAGGAGCCACTTCAGAGCAATaGGAGGATGGTAATCTTCCAGTTCAGCAAATAAGT | + |
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Preference number: 6 (lower is better) Translates to: EQKCAPGATSEQ*EDGNLPVQQIS Trigger: ACTTATTTGCTGAACTGGAAGATTACCATCCTCTCATTGCTCTGAAGTGGCTCCTGGGGCGCATTTTTGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS GCA 72 bp | CAGGCCATTGAAGTCATACAACACACCAAAGTTGGCTaGAGATGCTTCTTCAGCTCTTGGGACTGTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: QAIEVIQHTKVG*RCFFSSWDCFP Trigger: AGGAAAACAGTCCCAAGAGCTGAAGAAGCATCTGCAGCCAACTTTGGTGTGTTGTATGACTTCAATGGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS TCA 72 bp | GTACATCCACCTGAGGAACAGGAAGTACGAGGCCACTaGGGAACCAAACTGACTTTCAATTGCCTTGATTTT | + |
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Preference number: 6 (lower is better) Translates to: VHPPEEQEVRGH*GTKLTFNCLDF Trigger: AAAATCAAGGCAATTGAAAGTCAGTTTGGTTCCTCAGTGGCCTCGTACTTCCTGTTCCTCAGGTGGATGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS GCA 72 bp | AGGAAAGAGGTAGCCGGAAATTCAGCCATCCGATCGTaGGTTTATTGTCGTAATAGCCATAAAAGAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: RKEVAGNSAIRS*VYCRNSHKRGQ Trigger: CTGTCCTCTTTTATGGCTATTACGACAATAAACGCACGATCGGATGGCTGAATTTCCGGCTACCTCTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS CAA 72 bp | CAGCTACAGAACACCTTCCAGCTGAAGTTGAAAGTGTaGTCATCGCCACCACCATCGTCACCAATATTTTTG | + |
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Preference number: 6 (lower is better) Translates to: QLQNTFQLKLKV*SSPPPSSPIFL Trigger: CAAAAATATTGGTGACGATGGTGGTGGCGATGACAACACTTTCAACTTCAGCTGGAAGGTGTTCTGTAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS CAA 72 bp | ATCTCATCCATCAAGGCGAGAATGAATACATACAAGTaGCCTAGAAGAAGAGCAAAAATGCGCCCCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: ISSIKARMNTYK*PRRRAKMRPRS Trigger: GCTCCTGGGGCGCATTTTTGCTCTTCTTCTAGGCAACTTGTATGTATTCATTCTCGCCTTGATGGATGAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS CAA 90 bp | GTCTCAAGCTCTCTCTTCTGGGTAGCTTATCTTCTTCTTCTTCACTaGAGCTTTCCTCTGTATCCTCTTCTTTCTCCTCCACTTGGATTT | + |
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Preference number: 6 (lower is better) Translates to: VSSSLFWVAYLLLLH*SFPLYPLLSPPLGF Trigger: AAATCCAAGTGGAGGAGAAAGAAGAGGATACAGAGGAAAGCTCAAGTGAAGAAGAAGAAGATAAGCTACCCAGAAGAGAGAGCTTGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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| CDS CAA 90 bp | TTGTTGTTAATCTCATCCATCAAGGCGAGAATGAATACATACAAGTaGCCTAGAAGAAGAGCAAAAATGCGCCCCAGGAGCCACTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LLLISSIKARMNTYK*PRRRAKMRPRSHFR Trigger: TCTGAAGTGGCTCCTGGGGCGCATTTTTGCTCTTCTTCTAGGCAACTTGTATGTATTCATTCTCGCCTTGATGGATGAGATTAACAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039500.4 |
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