Pregenerated sensors for TMBIM7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014529Ensembl transcript IDs: ENSMUST00000014673.9, ENSMUST00000156117.2, ENSMUST00000198739.5, ENSMUST00000199959.5
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAACATGGAAGAAGGAAGCGTTCACTCTTTGCCTGCTTGCTCTCATaGGCGAGTCCATGGCAGGAATTACAGCCTACTTCTTCAGGATTC | + |
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Preference number: 1 (lower is better) Translates to: EHGRRKRSLFACLLS*ASPWQELQPTSSGF Trigger: GAATCCTGAAGAAGTAGGCTGTAATTCCTGCCATGGACTCGCCCATGAGAGCAAGCAGGCAAAGAGTGAACGCTTCCTTCTTCCATGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156117.2 |
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| 3UTR CAA 90 bp | CTGGCAGCCTATGTAAAGAACATGGAAGAAGGAAGCGTTCACTCTTaGCCTGCTTGCTCTCATGGGCGAGTCCATGGCAGGAATTACAGC | + |
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Preference number: 2 (lower is better) Translates to: LAAYVKNMEEGSVHS*PACSHGRVHGRNYS Trigger: GCTGTAATTCCTGCCATGGACTCGCCCATGAGAGCAAGCAGGCAAAGAGTGAACGCTTCCTTCTTCCATGTTCTTTACATAGGCTGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156117.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCACAGCTTTAAATTGTACCTGGAAAACGTCACCAAAGCATTGAGGACCTTCCCACCTTTCCTCTTCTaGGCCTTAGCTGGCTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: AHSFKLYLENVTKALRTFPPFLF*ALAGFG Trigger: GCCAAAGCCAGCTAAGGCCCAGAAGAGGAAAGGTGG...GAAGGTCCTCAATGCTTTGGTGACGTTTTCCAGGTACAATTTAAAGCTGTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198739.5 |
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| 3UTR CCA 72 bp | AGAAGGAAGCGTTCACTCTTTGCCTGCTTGCTCTCATaGGCGAGTCCATGGCAGGAATTACAGCCTACTTCT | + |
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Preference number: 3 (lower is better) Translates to: RRKRSLFACLLS*ASPWQELQPTS Trigger: AGAAGTAGGCTGTAATTCCTGCCATGGACTCGCCCATGAGAGCAAGCAGGCAAAGAGTGAACGCTTCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156117.2 |
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| 3UTR TCA 72 bp | AATTACAGCCTACTTCTTCAGGATTCTAATGTATACTaGAGATGGCTGAGACATCCAGCTCTGATAGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: NYSLLLQDSNVY*RWLRHPALIES Trigger: ACTTTCTATCAGAGCTGGATGTCTCAGCCATCTTCAGTATACATTAGAATCCTGAAGAAGTAGGCTGTAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156117.2 |
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| CDS-3UTR GCA 90 bp | TCGACACACCATAGGTGTCCCACCTTTCCTCTTCTGGGCCTTAGCTGGCTTTGGAACTGCTGGGAGGAGTaGATACAGGAACCAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: STHHRCPTFPLLGLSWLWNCWEE*IQEPGL Trigger: AAGCCCTGGTTCCTGTATGCACTCCTCCCAGCAGTT...CCAAAGCCAGCTAAGGCCCAGAAGAGGAAAGGTGGGACACCTATGGTGTGTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014673.9 |
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| CDS-3UTR GCA 90 bp | AGAAGGAAGCGTTCACTCTTTGCCTGCTTGCTCTCATGGGCGAGTCCATGGCAGCCGGATATCCAGGAGTaGATACAGGAACCAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: RRKRSLFACLLSWASPWQPDIQE*IQEPGL Trigger: AAGCCCTGGTTCCTGTATGCACTCCTGGATATCCGG...CTGCCATGGACTCGCCCATGAGAGCAAGCAGGCAAAGAGTGAACGCTTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156117.2 |
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| CDS-3UTR GCA 90 bp | AACCTGTCGACACACCATAGGTGTCCCACCTTTCCTCTTCTGGGCCTTAGCTGGGATCAGAATCATAACTaGTGGGAGGAGTGCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: NLSTHHRCPTFPLLGLSWDQNHN*WEECIQ Trigger: CTGTATGCACTCCTCCCAGCAGTTATGATTCTGATC...CCAGCTAAGGCCCAGAAGAGGAAAGGTGGGACACCTATGGTGTGTCGACAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014673.9 |
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| CDS-3UTR CCA 90 bp | AACCTGTCGACACACCATAGGTGTCCCACCTTTCCTCTTCTGGGCCTTAGCTGGCAGAATCATAACTGCTaGGAGGAGTGCATACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLSTHHRCPTFPLLGLSWQNHNC*EECIQE Trigger: TTCCTGTATGCACTCCTCCCAGCAGTTATGATTCTG...CCAGCTAAGGCCCAGAAGAGGAAAGGTGGGACACCTATGGTGTGTCGACAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014673.9 |
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| CDS-3UTR CCA 90 bp | AACCTGTCGACACACCATAGGTGTCCCACCTTTCCTCTTCTGGGCCTTAGCTGGCCATCACCAGGTATATaGAGAAGAGCAATGTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: NLSTHHRCPTFPLLGLSWPSPGI*RRAMFQ Trigger: TTGGAACATTGCTCTTCTCCATATACCTGGTGATGG...CCAGCTAAGGCCCAGAAGAGGAAAGGTGGGACACCTATGGTGTGTCGACAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000198739.5 |
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| 3UTR CAA 72 bp | TATGTAAAGAACATGGAAGAAGGAAGCGTTCACTCTTaGCCTGCTTGCTCTCATGGGCGAGTCCATGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YVKNMEEGSVHS*PACSHGRVHGR Trigger: CCTGCCATGGACTCGCCCATGAGAGCAAGCAGGCAAAGAGTGAACGCTTCCTTCTTCCATGTTCTTTACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156117.2 |
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| CDS-3UTR TCA 90 bp | TCGACACACCATAGGTGTCCCACCTTTCCTCTTCTGGGCCTTAGCTGGCTTTGGATTTACAGTCTCATTTaGGGGAGTAACATCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: STHHRCPTFPLLGLSWLWIYSLI*GSNILR Trigger: TCTGAGGATGTTACTCCCTCAAATGAGACTGTAAAT...CCAAAGCCAGCTAAGGCCCAGAAGAGGAAAGGTGGGACACCTATGGTGTGTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014673.9 |
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| CDS-3UTR TCA 90 bp | TCGACACACCATAGGTGTCCCACCTTTCCTCTTCTGGGCCTTAGCTGGCTTTGGTCAAAGGGAATGGATTaGTTTACAGTCTCATTTGAG | + |
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Preference number: 4 (lower is better) Translates to: STHHRCPTFPLLGLSWLWSKGMD*FTVSFE Trigger: CTCAAATGAGACTGTAAATCAATCCATTCCCTTTGA...CCAAAGCCAGCTAAGGCCCAGAAGAGGAAAGGTGGGACACCTATGGTGTGTCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014673.9 |
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| CDS-3UTR GCA 90 bp | GCTCACAGCTTTAAATTGTACCTGGAAAACGTCACCAAAGCATTGAGGACCTTCCCGGATATCCAGGAGTaGATACAGGAACCAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: AHSFKLYLENVTKALRTFPDIQE*IQEPGL Trigger: AAGCCCTGGTTCCTGTATGCACTCCTGGATATCCGG...GAAGGTCCTCAATGCTTTGGTGACGTTTTCCAGGTACAATTTAAAGCTGTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198739.5 |
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| CDS-3UTR TCA 90 bp | AACATGGAAGAAGGAAGCGTTCACTCTTTGCCTGCTTGCTCTCATGGGCGAGTCATTTACAGTCTCATTTaGGGGAGTAACATCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: NMEEGSVHSLPACSHGRVIYSLI*GSNILR Trigger: TCTGAGGATGTTACTCCCTCAAATGAGACTGTAAAT...GACTCGCCCATGAGAGCAAGCAGGCAAAGAGTGAACGCTTCCTTCTTCCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156117.2 |
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| CDS-3UTR TCA 90 bp | GAACATGGAAGAAGGAAGCGTTCACTCTTTGCCTGCTTGCTCTCATGGGCGAGTTCAAAGGGAATGGATTaGTTTACAGTCTCATTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EHGRRKRSLFACLLSWASSKGMD*FTVSFE Trigger: CTCAAATGAGACTGTAAATCAATCCATTCCCTTTGA...ACTCGCCCATGAGAGCAAGCAGGCAAAGAGTGAACGCTTCCTTCTTCCATGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156117.2 |
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| CDS-3UTR CCA 90 bp | TTTATTTATGTAGAGCTGGTGCTCACAGCTTTAAATTGTACCTGGAAAACGTCACCATCACCAGGTATATaGAGAAGAGCAATGTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FIYVELVLTALNCTWKTSPSPGI*RRAMFQ Trigger: TTGGAACATTGCTCTTCTCCATATACCTGGTGATGG...TGACGTTTTCCAGGTACAATTTAAAGCTGTGAGCACCAGCTCTACATAAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198739.5 |
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| CDS GCA 90 bp | CAGCAGGCCTTCCAGAATGGTAAAGAACGCCAGGAGAATGTAGTTTaGGGGCACTTGGCGCCGGATATCCCTGCAGCAAGCGAGTACAAA | + |
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Preference number: 5 (lower is better) Translates to: QQAFQNGKERQENVV*GHLAPDIPAASEYK Trigger: TTTGTACTCGCTTGCTGCAGGGATATCCGGCGCCAAGTGCCCGCAAACTACATTCTCCTGGCGTTCTTTACCATTCTGGAAGGCCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000199959.5 |
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| CDS-3UTR CAA 90 bp | TCGACACACCATAGGTGTCCCACCTTTCCTCTTCTGGGCCTTAGCTGGCTTTGGTCTCCAGAGCTAAAGTaGACTGGCTCACTGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: STHHRCPTFPLLGLSWLWSPELK*TGSLTS Trigger: GGAGGTCAGTGAGCCAGTCAACTTTAGCTCTGGAGA...CCAAAGCCAGCTAAGGCCCAGAAGAGGAAAGGTGGGACACCTATGGTGTGTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000198739.5 |
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| CDS-3UTR CAA 90 bp | AACCTGTCGACACACCATAGGTGTCCCACCTTTCCTCTTCTGGGCCTTAGCTGGTACAGGAACCAGGGCTaGGCGATGACCCACTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: NLSTHHRCPTFPLLGLSWYRNQG*AMTHFL Trigger: AAGAAAGTGGGTCATCGCCAAGCCCTGGTTCCTGTA...CCAGCTAAGGCCCAGAAGAGGAAAGGTGGGACACCTATGGTGTGTCGACAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000198739.5 |
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| CDS-3UTR CAA 90 bp | TCGACACACCATAGGTGTCCCACCTTTCCTCTTCTGGGCCTTAGCTGGCTTTGGTACAGGAACCAGGGCTaGGCGATGACCCACTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: STHHRCPTFPLLGLSWLWYRNQG*AMTHFL Trigger: AAGAAAGTGGGTCATCGCCAAGCCCTGGTTCCTGTA...CCAAAGCCAGCTAAGGCCCAGAAGAGGAAAGGTGGGACACCTATGGTGTGTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000198739.5 |
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| CDS GCA 90 bp | GCAGCAAGCGAGTACAAAGATCAGAATCATAACTGCTGGGAGGAGTaGATACAGGAACCAGGGCTTGGCGATGACCCACTTTCTTACAGG | + |
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Preference number: 5 (lower is better) Translates to: AASEYKDQNHNCWEE*IQEPGLGDDPLSYR Trigger: CCTGTAAGAAAGTGGGTCATCGCCAAGCCCTGGTTCCTGTATGCACTCCTCCCAGCAGTTATGATTCTGATCTTTGTACTCGCTTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000199959.5 |
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| CDS-3UTR CAA 90 bp | AACCTGTCGACACACCATAGGTGTCCCACCTTTCCTCTTCTGGGCCTTAGCTGGCTCCATCTCTATTCCTaGGATGTGAGTATTGTACGG | + |
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Preference number: 5 (lower is better) Translates to: NLSTHHRCPTFPLLGLSWLHLYS*DVSIVR Trigger: CCGTACAATACTCACATCCAAGGAATAGAGATGGAG...CCAGCTAAGGCCCAGAAGAGGAAAGGTGGGACACCTATGGTGTGTCGACAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014673.9 |
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| CDS-3UTR CAA 90 bp | AAGAACATGGAAGAAGGAAGCGTTCACTCTTTGCCTGCTTGCTCTCATGGGCGATACAGGAACCAGGGCTaGGCGATGACCCACTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: KNMEEGSVHSLPACSHGRYRNQG*AMTHFL Trigger: AAGAAAGTGGGTCATCGCCAAGCCCTGGTTCCTGTA...TCGCCCATGAGAGCAAGCAGGCAAAGAGTGAACGCTTCCTTCTTCCATGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156117.2 |
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| CDS-3UTR CAA 90 bp | TCGACACACCATAGGTGTCCCACCTTTCCTCTTCTGGGCCTTAGCTGGCTTTGGGTACTGCATAGGTATTaGCTCCATCTCTATTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: STHHRCPTFPLLGLSWLWVLHRY*LHLYSL Trigger: CAAGGAATAGAGATGGAGCAAATACCTATGCAGTAC...CCAAAGCCAGCTAAGGCCCAGAAGAGGAAAGGTGGGACACCTATGGTGTGTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014673.9 |
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| CDS-3UTR CAA 90 bp | TCGACACACCATAGGTGTCCCACCTTTCCTCTTCTGGGCCTTAGCTGGCTTTGGAACATCCTCAGAAACTaGTACTGCATAGGTATTTGC | + |
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Preference number: 5 (lower is better) Translates to: STHHRCPTFPLLGLSWLWNILRN*YCIGIC Trigger: GCAAATACCTATGCAGTACAAGTTTCTGAGGATGTT...CCAAAGCCAGCTAAGGCCCAGAAGAGGAAAGGTGGGACACCTATGGTGTGTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014673.9 |
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| CDS-3UTR CAA 90 bp | AGAAGGAAGCGTTCACTCTTTGCCTGCTTGCTCTCATGGGCGAGTCCATGGCAGAACATCCTCAGAAACTaGTACTGCATAGGTATTTGC | + |
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Preference number: 5 (lower is better) Translates to: RRKRSLFACLLSWASPWQNILRN*YCIGIC Trigger: GCAAATACCTATGCAGTACAAGTTTCTGAGGATGTT...CTGCCATGGACTCGCCCATGAGAGCAAGCAGGCAAAGAGTGAACGCTTCCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156117.2 |
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| CDS-3UTR CAA 90 bp | AACATGGAAGAAGGAAGCGTTCACTCTTTGCCTGCTTGCTCTCATGGGCGAGTCGTACTGCATAGGTATTaGCTCCATCTCTATTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: NMEEGSVHSLPACSHGRVVLHRY*LHLYSL Trigger: CAAGGAATAGAGATGGAGCAAATACCTATGCAGTAC...GACTCGCCCATGAGAGCAAGCAGGCAAAGAGTGAACGCTTCCTTCTTCCATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156117.2 |
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| CDS GCA 90 bp | AGCTGTGAAGGGCTGATCCAGTCTGCCAGTGTTACCTTTAATGGCTaGTGTATGAACCAGATGTTGATGATCTCCAGAGCTAAAGTTGAC | + |
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Preference number: 5 (lower is better) Translates to: SCEGLIQSASVTFNG*CMNQMLMISRAKVD Trigger: GTCAACTTTAGCTCTGGAGATCATCAACATCTGGTTCATACAGCAGCCATTAAAGGTAACACTGGCAGACTGGATCAGCCCTTCACAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014673.9 |
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| CDS-3UTR CAA 90 bp | TCTCATGGGCGAGTCCATGGCAGGAATTACAGCCTACTTCTTCAGGATTCTAATCTCCATCTCTATTCCTaGGATGTGAGTATTGTACGG | + |
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Preference number: 5 (lower is better) Translates to: SHGRVHGRNYSLLLQDSNLHLYS*DVSIVR Trigger: CCGTACAATACTCACATCCAAGGAATAGAGATGGAG...ATTAGAATCCTGAAGAAGTAGGCTGTAATTCCTGCCATGGACTCGCCCATGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156117.2 |
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| CDS TCA 90 bp | TCGCAGAAAACAAAGATGCCGATAATCACTGCAGTGATGAACAGCTaGATGGACAGAACGACAAACACTTTCATAATGAAATCATTACGA | + |
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Preference number: 5 (lower is better) Translates to: SQKTKMPIITAVMNS*MDRTTNTFIMKSLR Trigger: TCGTAATGATTTCATTATGAAAGTGTTTGTCGTTCTGTCCATTCAGCTGTTCATCACTGCAGTGATTATCGGCATCTTTGTTTTCTGCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000156117.2 |
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| CDS TCA 90 bp | TCGCAGAAAACAAAGATGCCGATAATCACTGCAGTGATGAACAGCTaGATGGACAGAACGACAAACACTTTCATAATGAAATCTTTAATG | + |
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Preference number: 5 (lower is better) Translates to: SQKTKMPIITAVMNS*MDRTTNTFIMKSLM Trigger: CATTAAAGATTTCATTATGAAAGTGTTTGTCGTTCTGTCCATTCAGCTGTTCATCACTGCAGTGATTATCGGCATCTTTGTTTTCTGCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198739.5 |
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| CDS GCA 72 bp | GTAGTTTGCGGGCACTTGGCGCCGGATATCCAGGAGTaGATACAGGAACCAGGGCTTGGCGATGACCCACTT | + |
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Preference number: 6 (lower is better) Translates to: VVCGHLAPDIQE*IQEPGLGDDPL Trigger: AAGTGGGTCATCGCCAAGCCCTGGTTCCTGTATGCACTCCTGGATATCCGGCGCCAAGTGCCCGCAAACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156117.2 ENSMUST00000198739.5 |
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| CDS GCA 72 bp | TTCCAGAATGGTAAAGAACGCCAGGAGAATGTAGTTTaGGGGCACTTGGCGCCGGATATCCCTGCAGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: FQNGKERQENVV*GHLAPDIPAAS Trigger: GCTTGCTGCAGGGATATCCGGCGCCAAGTGCCCGCAAACTACATTCTCCTGGCGTTCTTTACCATTCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000199959.5 |
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| CDS CAA 72 bp | GGTAAAGAACGCCAGGAGAATGTAGTTTGCGGGCACTaGGCGCCGGATATCCCTGCAGCAAGCGAGTACAAA | + |
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Preference number: 6 (lower is better) Translates to: GKERQENVVCGH*APDIPAASEYK Trigger: TTTGTACTCGCTTGCTGCAGGGATATCCGGCGCCAAGTGCCCGCAAACTACATTCTCCTGGCGTTCTTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000199959.5 |
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| CDS CAA 72 bp | GGTAAAGAACGCCAGGAGAATGTAGTTTGCGGGCACTaGGCGCCGGATATCCAGGAGTGCATACAGGAACCA | + |
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Preference number: 6 (lower is better) Translates to: GKERQENVVCGH*APDIQECIQEP Trigger: TGGTTCCTGTATGCACTCCTGGATATCCGGCGCCAAGTGCCCGCAAACTACATTCTCCTGGCGTTCTTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156117.2 ENSMUST00000198739.5 |
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| CDS GCA 72 bp | CCTGCAGCAAGCGAGTACAAAGATCAGAATCATAACTaGTGGGAGGAGTGCATACAGGAACCAGGGCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: PAASEYKDQNHN*WEECIQEPGLG Trigger: GCCAAGCCCTGGTTCCTGTATGCACTCCTCCCAGCAGTTATGATTCTGATCTTTGTACTCGCTTGCTGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000199959.5 |
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| CDS CCA 72 bp | GCAGCAAGCGAGTACAAAGATCAGAATCATAACTGCTaGGAGGAGTGCATACAGGAACCAGGGCTTGGCGAT | + |
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Preference number: 6 (lower is better) Translates to: AASEYKDQNHNC*EECIQEPGLGD Trigger: ATCGCCAAGCCCTGGTTCCTGTATGCACTCCTCCCAGCAGTTATGATTCTGATCTTTGTACTCGCTTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000199959.5 |
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| CDS CCA 72 bp | CCCCCACCATCATTTGCACGTCCATCACCAGGTATATaGAGAAGAGCAATGTTCCAAGCGCTGAGTACACCA | + |
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Preference number: 6 (lower is better) Translates to: PPPSFARPSPGI*RRAMFQALSTP Trigger: TGGTGTACTCAGCGCTTGGAACATTGCTCTTCTCCATATACCTGGTGATGGACGTGCAAATGATGGTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000198739.5 |
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| CDS CAA 90 bp | TTCCAGAATGGTAAAGAACGCCAGGAGAATGTAGTTTGCGGGCACTaGGCGCCGGATATCCCTGCAGCAAGCGAGTACAAAGATCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: FQNGKERQENVVCGH*APDIPAASEYKDQN Trigger: ATTCTGATCTTTGTACTCGCTTGCTGCAGGGATATCCGGCGCCAAGTGCCCGCAAACTACATTCTCCTGGCGTTCTTTACCATTCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000199959.5 |
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| CDS TCA 72 bp | TCTTGTACCCTGTCTCCAGATGAAGCTGTGAAGGGCTaGTCCAGTCTGCCAGTGTTACCTTTAATGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SCTLSPDEAVKG*SSLPVLPLMAA Trigger: AGCAGCCATTAAAGGTAACACTGGCAGACTGGATCAGCCCTTCACAGCTTCATCTGGAGACAGGGTACAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014673.9 |
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| CDS GCA 72 bp | GGGCTGATCCAGTCTGCCAGTGTTACCTTTAATGGCTaGTGTATGAACCAGATGTTGATGATCTCCAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: GLIQSASVTFNG*CMNQMLMISRA Trigger: AGCTCTGGAGATCATCAACATCTGGTTCATACAGCAGCCATTAAAGGTAACACTGGCAGACTGGATCAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014673.9 |
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| CDS CAA 90 bp | ATCAGAATCATAACTGCTGGGAGGAGTGCATACAGGAACCAGGGCTaGGCGATGACCCACTTTCTTACAGGTTCGCAGAAAACAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: IRIITAGRSAYRNQG*AMTHFLTGSQKTKM Trigger: CATCTTTGTTTTCTGCGAACCTGTAAGAAAGTGGGTCATCGCCAAGCCCTGGTTCCTGTATGCACTCCTCCCAGCAGTTATGATTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000199959.5 |
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| CDS CAA 90 bp | CAGTCTGCCAGTGTTACCTTTAATGGCTGCTGTATGAACCAGATGTaGATGATCTCCAGAGCTAAAGTTGACTGGCTCACTGACCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: QSASVTFNGCCMNQM*MISRAKVDWLTDLQ Trigger: TTGGAGGTCAGTGAGCCAGTCAACTTTAGCTCTGGAGATCATCAACATCTGGTTCATACAGCAGCCATTAAAGGTAACACTGGCAGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014673.9 |
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| CDS TCA 72 bp | TGCATAGGTATTTGCTCCATCTCTATTCCTTGGATGTaGGTATTGTACGGCTTCTTGTACCCTGTCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: CIGICSISIPWM*VLYGFLYPVSR Trigger: TCTGGAGACAGGGTACAAGAAGCCGTACAATACTCACATCCAAGGAATAGAGATGGAGCAAATACCTATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000156117.2 |
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| CDS CAA 72 bp | AGTGTTACCTTTAATGGCTGCTGTATGAACCAGATGTaGATGATCTCCAGAGCTAAAGTTGACTGGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: SVTFNGCCMNQM*MISRAKVDWLT Trigger: AGTGAGCCAGTCAACTTTAGCTCTGGAGATCATCAACATCTGGTTCATACAGCAGCCATTAAAGGTAACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014673.9 |
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| CDS CAA 72 bp | CTTGTACTGCATAGGTATTTGCTCCATCTCTATTCCTaGGATGTGAGTATTGTACGGCTTCTTGTACCCTGT | + |
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Preference number: 6 (lower is better) Translates to: LVLHRYLLHLYS*DVSIVRLLVPC Trigger: ACAGGGTACAAGAAGCCGTACAATACTCACATCCAAGGAATAGAGATGGAGCAAATACCTATGCAGTACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014673.9 ENSMUST00000156117.2 |
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| CDS CAA 90 bp | CACTTTCATAATGAAATCTTTAATGGCTGCTGTATGAACCAGATGTaGATGATCTCCAGAGCTAAAGTTGACTGGCTCACTGACCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: HFHNEIFNGCCMNQM*MISRAKVDWLTDLQ Trigger: TTGGAGGTCAGTGAGCCAGTCAACTTTAGCTCTGGAGATCATCAACATCTGGTTCATACAGCAGCCATTAAAGATTTCATTATGAAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198739.5 |
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| CDS CAA 72 bp | AATGAAATCTTTAATGGCTGCTGTATGAACCAGATGTaGATGATCTCCAGAGCTAAAGTTGACTGGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: NEIFNGCCMNQM*MISRAKVDWLT Trigger: AGTGAGCCAGTCAACTTTAGCTCTGGAGATCATCAACATCTGGTTCATACAGCAGCCATTAAAGATTTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198739.5 |
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| CDS TCA 72 bp | ACAAAGATGCCGATAATCACTGCAGTGATGAACAGCTaGATGGACAGAACGACAAACACTTTCATAATGAAA | + |
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Preference number: 6 (lower is better) Translates to: TKMPIITAVMNS*MDRTTNTFIMK Trigger: TTTCATTATGAAAGTGTTTGTCGTTCTGTCCATTCAGCTGTTCATCACTGCAGTGATTATCGGCATCTTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014673.9 ENSMUST00000156117.2 ENSMUST00000198739.5 |
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