Pregenerated sensors for TMBIM6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023010Ensembl transcript IDs: ENSMUST00000023749.15, ENSMUST00000159209.8, ENSMUST00000159531.3, ENSMUST00000160635.8, ENSMUST00000161250.8, ENSMUST00000161778.8, ENSMUST00000162624.8, ENSMUST00000229392.2, ENSMUST00000231173.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTGGGAGGCACCGGGCAGGCAGGGCGGCCGGCACCTTAGTGCACTaGGCCACTCTGGCTGCACCCGTCCAGTACAGTCTCATGGGACAG | + |
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Preference number: 1 (lower is better) Translates to: SGRHRAGRAAGTLVH*ATLAAPVQYSLMGQ Trigger: CTGTCCCATGAGACTGTACTGGACGGGTGCAGCCAGAGTGGCGCAGTGCACTAAGGTGCCGGCCGCCCTGCCTGCCCGGTGCCTCCCACT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR GCA 90 bp | GAACCACAGGGCCAGAGAGGGTCCAGTCAGCAGCGGGGCTCCGTCTaGGGCGGCTCGGCAGGATGCAGACTTCTGCTCTCACTTCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: EPQGQRGSSQQRGSV*GGSAGCRLLLSLLV Trigger: CACCAGAAGTGAGAGCAGAAGTCTGCATCCTGCCGAGCCGCCGCAGACGGAGCCCCGCTGCTGACTGGACCCTCTCTGGCCCTGTGGTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR TCA 90 bp | GCTCCCTCCCAGCTCTGCCGAGACAAAAGTGCACCGAGGAGCTTCTaGGAGTCACCAGTCCCACCTCACCGACTCCTCGCGGTCACCGGG | + |
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Preference number: 1 (lower is better) Translates to: APSQLCRDKSAPRSF*ESPVPPHRLLAVTG Trigger: CCCGGTGACCGCGAGGAGTCGGTGAGGTGGGACTGGTGACTCTCAGAAGCTCCTCGGTGCACTTTTGTCTCGGCAGAGCTGGGAGGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR GCA 90 bp | GCTTCCGCGAGCGCCTGCTCCCTCCCAGCTCTGCCGAGACAAAAGTaGACCGAGGAGCTTCTGAGAGTCACCAGTCCCACCTCACCGACT | + |
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Preference number: 1 (lower is better) Translates to: ASASACSLPALPRQK*TEELLRVTSPTSPT Trigger: AGTCGGTGAGGTGGGACTGGTGACTCTCAGAAGCTCCTCGGTGCACTTTTGTCTCGGCAGAGCTGGGAGGGAGCAGGCGCTCGCGGAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR TCA 90 bp | AGTGAGCATCGGCCAAGGGTGTGGAGAGATGAGGAGCGCTCATCATaGGGGAGCCCTTCCAACCCTCCCGGCTGCACCCAGGACAGGACA | + |
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Preference number: 1 (lower is better) Translates to: SEHRPRVWRDEERSS*GSPSNPPGCTQDRT Trigger: TGTCCTGTCCTGGGTGCAGCCGGGAGGGTTGGAAGGGCTCCCTCATGATGAGCGCTCCTCATCTCTCCACACCCTTGGCCGATGCTCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231173.2 |
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| 3UTR CCA 90 bp | CAGGCCTGGCACCTCAGGACAGGCAAACACGCTGCCCAGTCTCACTaGAACTGTGAGAACCGAACCACAGGGCCAGAGAGGGTCCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: QAWHLRTGKHAAQSH*NCENRTTGPERVQS Trigger: TGACTGGACCCTCTCTGGCCCTGTGGTTCGGTTCTCACAGTTCCAGTGAGACTGGGCAGCGTGTTTGCCTGTCCTGAGGTGCCAGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR TCA 90 bp | GCTCTCACTTCTGGTGCCTGGCTGTCTGAGCAGAGCAGGTGGCTGTaGTGGGCTGACAGAAAAGGGACGGGGAAGAACCCAGGACACGAA | + |
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Preference number: 1 (lower is better) Translates to: ALTSGAWLSEQSRWL*WADRKGTGKNPGHE Trigger: TTCGTGTCCTGGGTTCTTCCCCGTCCCTTTTCTGTCAGCCCATCACAGCCACCTGCTCTGCTCAGACAGCCAGGCACCAGAAGTGAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR TCA 90 bp | CAAAAGACCAAAACTTGCTGGAAACAGGTGAACAAACCCAGTAAGTaGCGTGCTTCCGCGAGCGCCTGCTCCCTCCCAGCTCTGCCGAGA | + |
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Preference number: 1 (lower is better) Translates to: QKTKTCWKQVNKPSK*RASASACSLPALPR Trigger: TCTCGGCAGAGCTGGGAGGGAGCAGGCGCTCGCGGAAGCACGTCACTTACTGGGTTTGTTCACCTGTTTCCAGCAAGTTTTGGTCTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR-3UTR CCA 90 bp | AGCGCTCATCATGAGGGAGCCCTTCCAACCCTCCCGGCTGCACCCAGGACAGGAGGGGAGAAGGTGAGCTaGGAAAGGCTGACGGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SAHHEGALPTLPAAPRTGGEKVS*ERLTAS Trigger: ACTGGCCGTCAGCCTTTCCCAGCTCACCTTCTCCCC...TCCTGTCCTGGGTGCAGCCGGGAGGGTTGGAAGGGCTCCCTCATGATGAGCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231173.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGCCACAACCACTCCGGGTGCCACCTTTCTGTGCAGACTGTGGTGGCCCACACCAGAGTCCACTCTCTaGAGGCCTGGCACCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RATTTPGATFLCRLWWPTPESTL*RPGTSG Trigger: TCCTGAGGTGCCAGGCCTGCAGAGAGTGGACTCTGG...TGTGGGCCACCACAGTCTGCACAGAAAGGTGGCACCCGGAGTGGTTGTGGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGAGGAAGGAAGCACCCACCAGAGTCCACTCTCTGCAGGCCTGGCACCTCCAGAGCAGGTGGCTGTaGTGGGCTGACAGAAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: QQRKEAPTRVHSLQAWHLQSRWL*WADRKG Trigger: CCCTTTTCTGTCAGCCCATCACAGCCACCTGCTCTG...GAGGTGCCAGGCCTGCAGAGAGTGGACTCTGGTGGGTGCTTCCTTCCTCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR-3UTR GCA 90 bp | GGCCACAACCACTCCGGGTGCCACCTTTCTGTGCAGACTGTGGTGGCCCACAGTGGCGGCTCGGCAGGATaGAGACTTCTGCTCTCACTT | + |
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Preference number: 2 (lower is better) Translates to: GHNHSGCHLSVQTVVAHSGGSAG*RLLLSL Trigger: AAGTGAGAGCAGAAGTCTGCATCCTGCCGAGCCGCC...ACTGTGGGCCACCACAGTCTGCACAGAAAGGTGGCACCCGGAGTGGTTGTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR-3UTR CCA 90 bp | AGCGCTCATCATGAGGGAGCCCTTCCAACCCTCCCGGCTGCACCCAGGACAGGAGAACTCAAATGGGGCTaGAGAGGCAAGCGGCGGTTA | + |
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Preference number: 2 (lower is better) Translates to: SAHHEGALPTLPAAPRTGELKWG*RGKRRL Trigger: TAACCGCCGCTTGCCTCTCCAGCCCCATTTGAGTTC...TCCTGTCCTGGGTGCAGCCGGGAGGGTTGGAAGGGCTCCCTCATGATGAGCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231173.2 |
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| 3UTR-3UTR CCA 90 bp | CCGACTCCTCGCGGTCACCGGGAGCTGCAGTCCTTACTCAGTACAATTAGCCCTGGGGAGAAGGTGAGCTaGGAAAGGCTGACGGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: PTPRGHRELQSLLSTISPGEKVS*ERLTAS Trigger: ACTGGCCGTCAGCCTTTCCCAGCTCACCTTCTCCCC...AGGGCTAATTGTACTGAGTAAGGACTGCAGCTCCCGGTGACCGCGAGGAGTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR-3UTR CCA 90 bp | GATGGAAAGCAGGTGGTTCCCCGAGGGCCACTCAGAGCGGAGAGAGCACTCACACTCACTTCTGGTGCCTaGCTGTCTGAGCAGAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: DGKQVVPRGPLRAERALTLTSGA*LSEQSR Trigger: CCTGCTCTGCTCAGACAGCCAGGCACCAGAAGTGAG...TGTGAGTGCTCTCTCCGCTCTGAGTGGCCCTCGGGGAACCACCTGCTTTCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR-3UTR GCA 90 bp | CGCCACTCTGGCTGCACCCGTCCAGTACAGTCTCATGGGACAGTAACCCAGCAGTTGTGGCCTCCACCTTaGCACACATACTCGGAGCGA | + |
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Preference number: 2 (lower is better) Translates to: RHSGCTRPVQSHGTVTQQLWPPP*HTYSER Trigger: TCGCTCCGAGTATGTGTGGCAAGGTGGAGGCCACAA...CTGCTGGGTTACTGTCCCATGAGACTGTACTGGACGGGTGCAGCCAGAGTGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR-3UTR GCA 90 bp | AGCGCTCATCATGAGGGAGCCCTTCCAACCCTCCCGGCTGCACCCAGGACAGGATCACCTCTACAGCTCTaGGTTCACTGCCTGGTATTC | + |
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Preference number: 2 (lower is better) Translates to: SAHHEGALPTLPAAPRTGSPLQL*VHCLVF Trigger: GAATACCAGGCAGTGAACGCAGAGCTGTAGAGGTGA...TCCTGTCCTGGGTGCAGCCGGGAGGGTTGGAAGGGCTCCCTCATGATGAGCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231173.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGAAAGCAGGTGGTTCCCCGAGGGCCACTCAGAGCGGAGAGAGCACTCACACAGGATGCAGACTTCTaGTCTCACTTCTGGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: DGKQVVPRGPLRAERALTQDADF*SHFWCL Trigger: CAGGCACCAGAAGTGAGAGCAGAAGTCTGCATCCTG...TGTGAGTGCTCTCTCCGCTCTGAGTGGCCCTCGGGGAACCACCTGCTTTCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR-3UTR GCA 90 bp | AGTGCACTGCGCCACTCTGGCTGCACCCGTCCAGTACAGTCTCATGGGACAGTAAAGGCAGAAAGCCTGTaGCAGACTCAGTTAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SALRHSGCTRPVQSHGTVKAESL*QTQLGS Trigger: GCTGCCTAACTGAGTCTGGCACAGGCTTTCTGCCTT...TACTGTCCCATGAGACTGTACTGGACGGGTGCAGCCAGAGTGGCGCAGTGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR-3UTR GCA 90 bp | GCTCTGAGCAAAGAAATCCAAACCGCCATCCTACTGGAAATGGGCTGCCCGTGGGCGGTCACCGGGAGCTaGAGTCCTTACTCAGTACAA | + |
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Preference number: 2 (lower is better) Translates to: ALSKEIQTAILLEMGCPWAVTGS*SPYSVQ Trigger: TTGTACTGAGTAAGGACTGCAGCTCCCGGTGACCGC...CCACGGGCAGCCCATTTCCAGTAGGATGGCGGTTTGGATTTCTTTGCTCAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR-3UTR CCA 90 bp | ATTGGCTCTGAGCAAAGAAATCCAAACCGCCATCCTACTGGAAATGGGCTGCCCCACTCTCTGCAGGCCTaGCACCTCAGGACAGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: IGSEQRNPNRHPTGNGLPHSLQA*HLRTGK Trigger: TTTGCCTGTCCTGAGGTGCCAGGCCTGCAGAGAGTG...GGGCAGCCCATTTCCAGTAGGATGGCGGTTTGGATTTCTTTGCTCAGAGCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR-3UTR CCA 90 bp | AGCGCTCATCATGAGGGAGCCCTTCCAACCCTCCCGGCTGCACCCAGGACAGGATCTGCGTTCACTGCCTaGTATTCCAAAATTAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: SAHHEGALPTLPAAPRTGSAFTA*YSKIRF Trigger: AAACCTAATTTTGGAATACCAGGCAGTGAACGCAGA...TCCTGTCCTGGGTGCAGCCGGGAGGGTTGGAAGGGCTCCCTCATGATGAGCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231173.2 |
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| 3UTR-3UTR GCA 90 bp | CAACAGGCTTCTGCCCAAAAGACCAAAACTTGCTGGAAACAGGTGAACAAACCCGCTCCCTCCCAGCTCTaGCGAGACAAAAGTGCACCG | + |
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Preference number: 2 (lower is better) Translates to: QQASAQKTKTCWKQVNKPAPSQL*RDKSAP Trigger: CGGTGCACTTTTGTCTCGGCAGAGCTGGGAGGGAGC...GGGTTTGTTCACCTGTTTCCAGCAAGTTTTGGTCTTTTGGGCAGAAGCCTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR-3UTR GCA 90 bp | ATTGGCTCTGAGCAAAGAAATCCAAACCGCCATCCTACTGGAAATGGGCTGCCCGACACCTGTGATGTGTaGAAAGAAACAGGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: IGSEQRNPNRHPTGNGLPDTCDV*KETGVG Trigger: CCCCACCCCTGTTTCTTTGCACACATCACAGGTGTC...GGGCAGCCCATTTCCAGTAGGATGGCGGTTTGGATTTCTTTGCTCAGAGCCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR-3UTR CCA 90 bp | TTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGGTGGGGGGGGAGAAGGTGAGCTaGGAAAGGCTGACGGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: FIIIEHDTCDVCKETGVGGEKVS*ERLTAS Trigger: ACTGGCCGTCAGCCTTTCCCAGCTCACCTTCTCCCC...CCCCACCCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAA 52% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 ENSMUST00000231173.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGGCTCTGAGCAAAGAAATCCAAACCGCCATCCTACTGGAAATGGGCTGCCCTTTCTGTGCAGACTGTaGTGGCCCACAGTTGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: IGSEQRNPNRHPTGNGLPFLCRL*WPTVGQ Trigger: TTGACCAACTGTGGGCCACCACAGTCTGCACAGAAA...GGGCAGCCCATTTCCAGTAGGATGGCGGTTTGGATTTCTTTGCTCAGAGCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR-3UTR CCA 90 bp | AAAAGCTTTCCTGATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCGGGGAGAAGGTGAGCTaGGAAAGGCTGACGGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: KSFPDAFIIIEHDTCDVCGEKVS*ERLTAS Trigger: ACTGGCCGTCAGCCTTTCCCAGCTCACCTTCTCCCC...GCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATCAGGAAAGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000161250.8 ENSMUST00000231173.2 |
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| 3UTR-3UTR TCA 90 bp | CCTACAAATGAAGAAAATCAGCTAGGTAGTTTCCCCTCTGACGTACAAACCCATAAGGGTGTGGAGAGATaGGGAGCGCTCATCATGAGG | + |
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Preference number: 2 (lower is better) Translates to: PTNEENQLGSFPSDVQTHKGVER*GALIMR Trigger: CCTCATGATGAGCGCTCCTCATCTCTCCACACCCTT...ATGGGTTTGTACGTCAGAGGGGAAACTACCTAGCTGATTTTCTTCATTTGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231173.2 |
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| 3UTR-3UTR GCA 90 bp | CCTACAAATGAAGAAAATCAGCTAGGTAGTTTCCCCTCTGACGTACAAACCCATGACACCTGTGATGTGTaGAAAGAAACAGGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: PTNEENQLGSFPSDVQTHDTCDV*KETGVG Trigger: CCCCACCCCTGTTTCTTTGCACACATCACAGGTGTC...ATGGGTTTGTACGTCAGAGGGGAAACTACCTAGCTGATTTTCTTCATTTGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231173.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGACACGAAGCCAAACTCCAAACTATATTCACTAATCAGTTTTTGATCAAAGTGGCTGTGATGGGCTaGCAGAAAAGGGACGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: PGHEAKLQTIFTNQFLIKVAVMG*QKRDGE Trigger: TTCCCCGTCCCTTTTCTGTCAGCCCATCACAGCCAC...TTTGATCAAAAACTGATTAGTGAATATAGTTTGGAGTTTGGCTTCGTGTCCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023749.15 ENSMUST00000231173.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGACACGAAGCCAAACTCCAAACTATATTCACTAATCAGTTTTTGATCAAAGCTGCCCAGTCTCACTaGAACTGTGAGAACCGAACC | + |
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Preference number: 2 (lower is better) Translates to: PGHEAKLQTIFTNQFLIKAAQSH*NCENRT Trigger: GGTTCGGTTCTCACAGTTCCAGTGAGACTGGGCAGC...TTTGATCAAAAACTGATTAGTGAATATAGTTTGGAGTTTGGCTTCGTGTCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR-3UTR GCA 90 bp | CCTACAAATGAAGAAAATCAGCTAGGTAGTTTCCCCTCTGACGTACAAACCCATAGGAAGTGCAGTGCATaGAGTATACATGTATACATG | + |
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Preference number: 2 (lower is better) Translates to: PTNEENQLGSFPSDVQTHRKCSA*SIHVYM Trigger: CATGTATACATGTATACTGCATGCACTGCACTTCCT...ATGGGTTTGTACGTCAGAGGGGAAACTACCTAGCTGATTTTCTTCATTTGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231173.2 |
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| 3UTR-3UTR GCA 90 bp | CCTACAAATGAAGAAAATCAGCTAGGTAGTTTCCCCTCTGACGTACAAACCCATTTCCAGGAAGTGCAGTaGATGCAGTATACATGTATA | + |
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Preference number: 2 (lower is better) Translates to: PTNEENQLGSFPSDVQTHFQEVQ*MQYTCI Trigger: TATACATGTATACTGCATGCACTGCACTTCCTGGAA...ATGGGTTTGTACGTCAGAGGGGAAACTACCTAGCTGATTTTCTTCATTTGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231173.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGACACGAAGCCAAACTCCAAACTATATTCACTAATCAGTTTTTGATCAAAAGGCTGACGGCCAGTTaGTCACTTCTTTTCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: PGHEAKLQTIFTNQFLIKRLTAS*SLLFFL Trigger: AAGAAAGAAAAGAAGTGACCAACTGGCCGTCAGCCT...TTTGATCAAAAACTGATTAGTGAATATAGTTTGGAGTTTGGCTTCGTGTCCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000231173.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGACACGAAGCCAAACTCCAAACTATATTCACTAATCAGTTTTTGATCAAAGTATACATGTATACATaGGCAGGCACTCATACATGT | + |
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Preference number: 2 (lower is better) Translates to: PGHEAKLQTIFTNQFLIKVYMYT*AGTHTC Trigger: ACATGTATGAGTGCCTGCTCATGTATACATGTATAC...TTTGATCAAAAACTGATTAGTGAATATAGTTTGGAGTTTGGCTTCGTGTCCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231173.2 |
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| 3UTR GCA 72 bp | CACCGGGCAGGCAGGGCGGCCGGCACCTTAGTGCACTaGGCCACTCTGGCTGCACCCGTCCAGTACAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: HRAGRAAGTLVH*ATLAAPVQYSL Trigger: GAGACTGTACTGGACGGGTGCAGCCAGAGTGGCGCAGTGCACTAAGGTGCCGGCCGCCCTGCCTGCCCGGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR GCA 72 bp | GGCCAGAGAGGGTCCAGTCAGCAGCGGGGCTCCGTCTaGGGCGGCTCGGCAGGATGCAGACTTCTGCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: GQRGSSQQRGSV*GGSAGCRLLLS Trigger: TGAGAGCAGAAGTCTGCATCCTGCCGAGCCGCCGCAGACGGAGCCCCGCTGCTGACTGGACCCTCTCTGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR CCA 72 bp | GGGAGCTGCTGCCATCCCTTAGTAAGCTCAGGTCAGTaGGAGGCACCGGGCAGGCAGGGCGGCCGGCACCTT | + |
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Preference number: 3 (lower is better) Translates to: GSCCHPLVSSGQ*EAPGRQGGRHL Trigger: AAGGTGCCGGCCGCCCTGCCTGCCCGGTGCCTCCCACTGACCTGAGCTTACTAAGGGATGGCAGCAGCTCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR TCA 72 bp | CGGCCAAGGGTGTGGAGAGATGAGGAGCGCTCATCATaGGGGAGCCCTTCCAACCCTCCCGGCTGCACCCAG | + |
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Preference number: 3 (lower is better) Translates to: RPRVWRDEERSS*GSPSNPPGCTQ Trigger: CTGGGTGCAGCCGGGAGGGTTGGAAGGGCTCCCTCATGATGAGCGCTCCTCATCTCTCCACACCCTTGGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231173.2 |
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| 3UTR CCA 72 bp | GGGCAGCAGCTGGGAGAGCCAACTGCACAGCTTCCCTaGGCCCAGCCCACACAGAACCAGCAAGCCTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: GQQLGEPTAQLP*AQPTQNQQACH Trigger: GTGACAGGCTTGCTGGTTCTGTGTGGGCTGGGCCCAGGGAAGCTGTGCAGTTGGCTCTCCCAGCTGCTGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231173.2 |
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| 3UTR GCA 72 bp | GGCGGCCGGCACCTTAGTGCACTGCGCCACTCTGGCTaGACCCGTCCAGTACAGTCTCATGGGACAGTAACC | + |
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Preference number: 3 (lower is better) Translates to: GGRHLSALRHSG*TRPVQSHGTVT Trigger: GGTTACTGTCCCATGAGACTGTACTGGACGGGTGCAGCCAGAGTGGCGCAGTGCACTAAGGTGCCGGCCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR TCA 72 bp | CAGCTCTGCCGAGACAAAAGTGCACCGAGGAGCTTCTaGGAGTCACCAGTCCCACCTCACCGACTCCTCGCG | + |
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Preference number: 3 (lower is better) Translates to: QLCRDKSAPRSF*ESPVPPHRLLA Trigger: CGCGAGGAGTCGGTGAGGTGGGACTGGTGACTCTCAGAAGCTCCTCGGTGCACTTTTGTCTCGGCAGAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR GCA 72 bp | AGCAGAGGAAGGAAGCACCCACCAGAGTCCACTCTCTaGAGGCCTGGCACCTCAGGACAGGCAAACACGCTG | + |
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Preference number: 3 (lower is better) Translates to: SRGRKHPPESTL*RPGTSGQANTL Trigger: CAGCGTGTTTGCCTGTCCTGAGGTGCCAGGCCTGCAGAGAGTGGACTCTGGTGGGTGCTTCCTTCCTCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR GCA 72 bp | GTGAGGGCCACAACCACTCCGGGTGCCACCTTTCTGTaGAGACTGTGGTGGCCCACAGTTGGTCAACAGGCT | + |
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Preference number: 3 (lower is better) Translates to: VRATTTPGATFL*RLWWPTVGQQA Trigger: AGCCTGTTGACCAACTGTGGGCCACCACAGTCTGCACAGAAAGGTGGCACCCGGAGTGGTTGTGGCCCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR TCA 72 bp | GACAGGCAAACACGCTGCCCAGTCTCACTGGAACTGTaGGAACCGAACCACAGGGCCAGAGAGGGTCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: DRQTRCPVSLEL*EPNHRAREGPV Trigger: GACTGGACCCTCTCTGGCCCTGTGGTTCGGTTCTCACAGTTCCAGTGAGACTGGGCAGCGTGTTTGCCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR CCA 72 bp | GCGCCACTCTGGCTGCACCCGTCCAGTACAGTCTCATaGGACAGTAACCCAGCAGCCACTGTGTCAACTGCA | + |
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Preference number: 3 (lower is better) Translates to: APLWLHPSSTVS*DSNPAATVSTA Trigger: TGCAGTTGACACAGTGGCTGCTGGGTTACTGTCCCATGAGACTGTACTGGACGGGTGCAGCCAGAGTGGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| 3UTR CCA 72 bp | ACCACTCCGGGTGCCACCTTTCTGTGCAGACTGTGGTaGCCCACAGTTGGTCAACAGGCTTCTGCCCAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TTPGATFLCRLW*PTVGQQASAQK Trigger: CTTTTGGGCAGAAGCCTGTTGACCAACTGTGGGCCACCACAGTCTGCACAGAAAGGTGGCACCCGGAGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| 3UTR CCA 72 bp | ACAACCACTCCGGGTGCCACCTTTCTGTGCAGACTGTaGTGGCCCACAGTTGGTCAACAGGCTTCTGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TTTPGATFLCRL*WPTVGQQASAQ Trigger: TTGGGCAGAAGCCTGTTGACCAACTGTGGGCCACCACAGTCTGCACAGAAAGGTGGCACCCGGAGTGGTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| 3UTR TCA 72 bp | AAAACTTGCTGGAAACAGGTGAACAAACCCAGTAAGTaGCGTGCTTCCGCGAGCGCCTGCTCCCTCCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KTCWKQVNKPSK*RASASACSLPA Trigger: AGCTGGGAGGGAGCAGGCGCTCGCGGAAGCACGTCACTTACTGGGTTTGTTCACCTGTTTCCAGCAAGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| 3UTR TCA 72 bp | CGGTTGTCTTCACAGTATGAGTTAGAGAACGCAGCCTaGGCTGGGACAGAGACCGGGGACAGAGTGGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: RLSSQYELENAA*AGTETGDRVEM Trigger: CATCTCCACTCTGTCCCCGGTCTCTGTCCCAGCTCAGGCTGCGTTCTCTAACTCATACTGTGAAGACAACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| 3UTR TCA 72 bp | CTTCTGCCCAAAAGACCAAAACTTGCTGGAAACAGGTaGACAAACCCAGTAAGTGACGTGCTTCCGCGAGCG | + |
|
Preference number: 3 (lower is better) Translates to: LLPKRPKLAGNR*TNPVSDVLPRA Trigger: CGCTCGCGGAAGCACGTCACTTACTGGGTTTGTTCACCTGTTTCCAGCAAGTTTTGGTCTTTTGGGCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| 3UTR GCA 72 bp | CAGACTGTGGTGGCCCACAGTTGGTCAACAGGCTTCTaGCCAAAAGACCAAAACTTGCTGGAAACAGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QTVVAHSWSTGF*PKDQNLLETGE Trigger: TTCACCTGTTTCCAGCAAGTTTTGGTCTTTTGGGCAGAAGCCTGTTGACCAACTGTGGGCCACCACAGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| 3UTR TCA 72 bp | GTAACCCAGCAGCCACTGTGTCAACTGCATTGGCTCTaGGCAAAGAAATCCAAACCGCCATCCTACTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VTQQPLCQLHWL*AKKSKPPSYWK Trigger: TTTCCAGTAGGATGGCGGTTTGGATTTCTTTGCTCAGAGCCAATGCAGTTGACACAGTGGCTGCTGGGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| 3UTR CCA 72 bp | TTAAGAACCAACAAAGAAAAACACACTAGGGAACCTTaGCATTGTGGCCTCCACCTTGCCACACATACTCGG | + |
|
Preference number: 3 (lower is better) Translates to: LRTNKEKHTREP*HCGLHLATHTR Trigger: CCGAGTATGTGTGGCAAGGTGGAGGCCACAATGCCAAGGTTCCCTAGTGTGTTTTTCTTTGTTGGTTCTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| CDS-3UTR TCA 90 bp | GCTCTGAGCAAAGAAATCCAAACCGCCATCCTACTGGAAATGGGCTGCCCGTGGTCATGGCCGTGCCCATaGAGGCCGTGGGGAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSKEIQTAILLEMGCPWSWPCP*RPWGGC Trigger: GCATCCTCCCCACGGCCTTCATGGGCACGGCCATGA...CCACGGGCAGCCCATTTCCAGTAGGATGGCGGTTTGGATTTCTTTGCTCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| CDS-3UTR TCA 90 bp | CGCCACTCTGGCTGCACCCGTCCAGTACAGTCTCATGGGACAGTAACCCAGCAGTCGGTCTCATGGCTGTaGGGTGTTGCCATCAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RHSGCTRPVQSHGTVTQQSVSWL*GVAISQ Trigger: TTGGCTGATGGCAACACCTCACAGCCATGAGACCGA...CTGCTGGGTTACTGTCCCATGAGACTGTACTGGACGGGTGCAGCCAGAGTGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| CDS-3UTR TCA 90 bp | GCGGAGAGAGCACTCACAAGTCTACACCTCCTCCTCATGGCAAGGCAGAAAGCCGGACAAAGCCACACATaGCCAGCAGTCCCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: AERALTSLHLLLMARQKAGQSHT*PAVPGT Trigger: TGTACCTGGGACTGCTGGTCATGTGTGGCTTTGTCC...GGCTTTCTGCCTTGCCATGAGGAGGAGGTGTAGACTTGTGAGTGCTCTCTCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| CDS-3UTR GCA 90 bp | AGCTCTGCCGAGACAAAAGTGCACCGAGGAGCTTCTGAGAGTCACCAGTCCCACATGGACATAGGCCCCTaGTGCCGCCACAAACATACA | + |
|
Preference number: 4 (lower is better) Translates to: SSAETKVHRGASESHQSHMDIGP*CRHKHT Trigger: TGTATGTTTGTGGCGGCAGCAGGGGCCTATGTCCAT...GTGGGACTGGTGACTCTCAGAAGCTCCTCGGTGCACTTTTGTCTCGGCAGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| 3UTR CAA 72 bp | TTAGGAGCACTGGCTGCACGGCAGACCCAGGTTTCATaGCCGGCACCCACACTGCAGCTTCCAATTCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: LGALAARQTQVS*PAPTLQLPILT Trigger: AGTTAGAATTGGAAGCTGCAGTGTGGGTGCCGGCAATGAAACCTGGGTCTGCCGTGCAGCCAGTGCTCCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231173.2 |
||
| CDS-3UTR TCA 90 bp | TTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGGTGGGGTCATGGCCGTGCCCATaGAGGCCGTGGGGAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FIIIEHDTCDVCKETGVGSWPCP*RPWGGC Trigger: GCATCCTCCCCACGGCCTTCATGGGCACGGCCATGA...CCCCACCCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGGTGTCATGGCCGTGCCCATaGAGGCCGTGGGGAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: AFIIIEHDTCDVCKETGVSWPCP*RPWGGC Trigger: GCATCCTCCCCACGGCCTTCATGGGCACGGCCATGA...CACCCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTGAGCAAAGAAATCCAAACCGCCATCCTACTGGAAATGGGCTGCCCGTGGTCCCAGGTACAGGTTTaGCTGGAACAGCCAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALSKEIQTAILLEMGCPWSQVQV*LEQPNG Trigger: TCCATTTGGCTGTTCCAGGCAAACCTGTACCTGGGA...CCACGGGCAGCCCATTTCCAGTAGGATGGCGGTTTGGATTTCTTTGCTCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| CDS-3UTR TCA 90 bp | AGGGCCACAACCACTCCGGGTGCCACCTTTCTGTGCAGACTGTGGTGGCCCACAAGAGGGCATCAAAGTTaGTCTTCCGATCAAATATAT | + |
|
Preference number: 4 (lower is better) Translates to: RATTTPGATFLCRLWWPTRGHQS*SSDQIY Trigger: ATATATTTGATCGGAAGATCAACTTTGATGCCCTCT...TGTGGGCCACCACAGTCTGCACAGAAAGGTGGCACCCGGAGTGGTTGTGGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| CDS-3UTR CCA 90 bp | CGCCACTCTGGCTGCACCCGTCCAGTACAGTCTCATGGGACAGTAACCCAGCAGTACATAGTGCAAAACTaGCATAGACCTTCTTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RHSGCTRPVQSHGTVTQQYIVQN*HRPSLG Trigger: ACCTAAAGAAGGTCTATGCCAGTTTTGCACTATGTA...CTGCTGGGTTACTGTCCCATGAGACTGTACTGGACGGGTGCAGCCAGAGTGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| 3UTR CAA 72 bp | TGGGACAGTAACCCAGCAGCCACTGTGTCAACTGCATaGGCTCTGAGCAAAGAAATCCAAACCGCCATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: WDSNPAATVSTA*ALSKEIQTAIL Trigger: TAGGATGGCGGTTTGGATTTCTTTGCTCAGAGCCAATGCAGTTGACACAGTGGCTGCTGGGTTACTGTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| CDS-3UTR TCA 90 bp | TTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGGTGGGGGAGAGGACAGGAGCATaGGGCTCATGGCTGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: FIIIEHDTCDVCKETGVGERTGA*GSWLTS Trigger: TGATGTCAGCCATGAGCCTCATGCTCCTGTCCTCTC...CCCCACCCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGAGCAAAGAAATCCAAACCGCCATCCTACTGGAAATGGGCTGCCCGTGGGTCGAGGGAGTTATGTaGGAAAATTTTAAGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSKEIQTAILLEMGCPWVEGVM*ENFKRA Trigger: TGCCCTCTTAAAATTTTCCCACATAACTCCCTCGAC...CCACGGGCAGCCCATTTCCAGTAGGATGGCGGTTTGGATTTCTTTGCTCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| CDS-3UTR TCA 90 bp | GCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGGTGGAGAGGACAGGAGCATaGGGCTCATGGCTGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: AFIIIEHDTCDVCKETGVERTGA*GSWLTS Trigger: TGATGTCAGCCATGAGCCTCATGCTCCTGTCCTCTC...CACCCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGGTGGGACAAAGCCACACATaGCCAGCAGTCCCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: AFIIIEHDTCDVCKETGVGQSHT*PAVPGT Trigger: TGTACCTGGGACTGCTGGTCATGTGTGGCTTTGTCC...CACCCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR GCA 90 bp | TTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGGTGGGGATGGACATAGGCCCCTaGTGCCGCCACAAACATACA | + |
|
Preference number: 4 (lower is better) Translates to: FIIIEHDTCDVCKETGVGMDIGP*CRHKHT Trigger: TGTATGTTTGTGGCGGCAGCAGGGGCCTATGTCCAT...CCCCACCCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR CCA 90 bp | TTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGGTGGGGGAGAGTAGGCCAGCCTaGATGAAGTGTGTGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: FIIIEHDTCDVCKETGVGESRPA*MKCVTT Trigger: TGTGGTCACACACTTCATCCAGGCTGGCCTACTCTC...CCCCACCCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR CCA 90 bp | CAACAGGCTTCTGCCCAAAAGACCAAAACTTGCTGGAAACAGGTGAACAAACCCAGGTACAGGTTTGCCTaGAACAGCCAAATGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QQASAQKTKTCWKQVNKPRYRFA*NSQMEP Trigger: TGGCTCCATTTGGCTGTTCCAGGCAAACCTGTACCT...GGGTTTGTTCACCTGTTTCCAGCAAGTTTTGGTCTTTTGGGCAGAAGCCTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| CDS-3UTR TCA 90 bp | GATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGTCGGTCTCATGGCTGTaGGGTGTTGCCATCAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DAFIIIEHDTCDVCKETGSVSWL*GVAISQ Trigger: TTGGCTGATGGCAACACCTCACAGCCATGAGACCGA...CCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR TCA 90 bp | GATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGGGACAAAGCCACACATaGCCAGCAGTCCCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: DAFIIIEHDTCDVCKETGGQSHT*PAVPGT Trigger: TGTACCTGGGACTGCTGGTCATGTGTGGCTTTGTCC...CCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR GCA 90 bp | TTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGGTGGGGTCCCAGGTACAGGTTTaGCTGGAACAGCCAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FIIIEHDTCDVCKETGVGSQVQV*LEQPNG Trigger: TCCATTTGGCTGTTCCAGGCAAACCTGTACCTGGGA...CCCCACCCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGGTGGAGAGTAGGCCAGCCTaGATGAAGTGTGTGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: AFIIIEHDTCDVCKETGVESRPA*MKCVTT Trigger: TGTGGTCACACACTTCATCCAGGCTGGCCTACTCTC...CACCCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGCTTTCCTGATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCGAGAGTAGGCCAGCCTaGATGAAGTGTGTGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: KSFPDAFIIIEHDTCDVCESRPA*MKCVTT Trigger: TGTGGTCACACACTTCATCCAGGCTGGCCTACTCTC...GCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATCAGGAAAGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023749.15 ENSMUST00000161250.8 |
||
| CDS-3UTR CCA 90 bp | GATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGAGGTACAGGTTTGCCTaGAACAGCCAAATGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DAFIIIEHDTCDVCKETGRYRFA*NSQMEP Trigger: TGGCTCCATTTGGCTGTTCCAGGCAAACCTGTACCT...CCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGCTTTCCTGATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCTCCCAGGTACAGGTTTaGCTGGAACAGCCAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSFPDAFIIIEHDTCDVCSQVQV*LEQPNG Trigger: TCCATTTGGCTGTTCCAGGCAAACCTGTACCTGGGA...GCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATCAGGAAAGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023749.15 ENSMUST00000161250.8 |
||
| CDS-3UTR CCA 90 bp | GATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGCCTGGAACAGCCAAATaGAGCCAAAGAAAAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DAFIIIEHDTCDVCKETGPGTAK*SQRKGS Trigger: GGAACCTTTTCTTTGGCTCCATTTGGCTGTTCCAGG...CCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGGTGGTCGAGGGAGTTATGTaGGAAAATTTTAAGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AFIIIEHDTCDVCKETGVVEGVM*ENFKRA Trigger: TGCCCTCTTAAAATTTTCCCACATAACTCCCTCGAC...CACCCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAAGGTACAGGTTTGCCTaGAACAGCCAAATGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPDAFIIIEHDTCDVCKERYRFA*NSQMEP Trigger: TGGCTCCATTTGGCTGTTCCAGGCAAACCTGTACCT...TTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATCAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR TCA 90 bp | TTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGGTGGGGAGAGGGCATCAAAGTTaGTCTTCCGATCAAATATAT | + |
|
Preference number: 4 (lower is better) Translates to: FIIIEHDTCDVCKETGVGRGHQS*SSDQIY Trigger: ATATATTTGATCGGAAGATCAACTTTGATGCCCTCT...CCCCACCCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAACCTGGAACAGCCAAATaGAGCCAAAGAAAAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPDAFIIIEHDTCDVCKEPGTAK*SQRKGS Trigger: GGAACCTTTTCTTTGGCTCCATTTGGCTGTTCCAGG...TTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATCAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGCTTTCCTGATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCGTCGAGGGAGTTATGTaGGAAAATTTTAAGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSFPDAFIIIEHDTCDVCVEGVM*ENFKRA Trigger: TGCCCTCTTAAAATTTTCCCACATAACTCCCTCGAC...GCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATCAGGAAAGCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023749.15 ENSMUST00000161250.8 |
||
| CDS-3UTR TCA 90 bp | GATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGAGAGGGCATCAAAGTTaGTCTTCCGATCAAATATAT | + |
|
Preference number: 4 (lower is better) Translates to: DAFIIIEHDTCDVCKETGRGHQS*SSDQIY Trigger: ATATATTTGATCGGAAGATCAACTTTGATGCCCTCT...CCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS-3UTR CCA 90 bp | GATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGTACATAGTGCAAAACTaGCATAGACCTTCTTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DAFIIIEHDTCDVCKETGYIVQN*HRPSLG Trigger: ACCTAAAGAAGGTCTATGCCAGTTTTGCACTATGTA...CCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
||
| CDS GCA 90 bp | GAGAAGTCCCAGTCTCTTTTGCTCGGTCTCATGGCTGTGAGGTGTTaGCATCAGCCAAATCATCAAGGCCAAGGAGCCCAGGGCGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EKSQSLLLGLMAVRC*HQPNHQGQGAQGGE Trigger: CTCTCCGCCCTGGGCTCCTTGGCCTTGATGATTTGGCTGATGGCAACACCTCACAGCCATGAGACCGAGCAAAAGAGACTGGGACTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000023749.15 ENSMUST00000159209.8 ENSMUST00000159531.3 ENSMUST00000160635.8 ENSMUST00000161250.8 ENSMUST00000161778.8 ENSMUST00000162624.8 ENSMUST00000229392.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAAGCAGGTGGTTCCCCGAGGGCCACTCAGAGCGGAGAGAGCACTCACAAGCATGGCTGTGAGGTGTaGCCATCAGCCAAATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: WKAGGSPRATQSGESTHKHGCEV*PSAKSS Trigger: TGATGATTTGGCTGATGGCAACACCTCACAGCCATG...CTTGTGAGTGCTCTCTCCGCTCTGAGTGGCCCTCGGGGAACCACCTGCTTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
||
| CDS TCA 90 bp | AAGCCAGCGAGAAGTCCCAGTCTCTTTTGCTCGGTCTCATGGCTGTaGGGTGTTGCCATCAGCCAAATCATCAAGGCCAAGGAGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPARSPSLFCSVSWL*GVAISQIIKAKEPR Trigger: CCTGGGCTCCTTGGCCTTGATGATTTGGCTGATGGCAACACCTCACAGCCATGAGACCGAGCAAAAGAGACTGGGACTTCTCGCTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000023749.15 ENSMUST00000159209.8 ENSMUST00000159531.3 ENSMUST00000160635.8 ENSMUST00000161250.8 ENSMUST00000161778.8 ENSMUST00000162624.8 ENSMUST00000229392.2 |
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| CDS-3UTR CAA 90 bp | GCTCTGAGCAAAGAAATCCAAACCGCCATCCTACTGGAAATGGGCTGCCCGTGGAAGTCCCAGTCTCTTTaGCTCGGTCTCATGGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: ALSKEIQTAILLEMGCPWKSQSL*LGLMAV Trigger: CACAGCCATGAGACCGAGCAAAAGAGACTGGGACTT...CCACGGGCAGCCCATTTCCAGTAGGATGGCGGTTTGGATTTCTTTGCTCAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| CDS-3UTR CAA 90 bp | AGTGCACTGCGCCACTCTGGCTGCACCCGTCCAGTACAGTCTCATGGGACAGTATTCTTGTCCTTCTCATaGAAGGCCAGGATCAACATG | + |
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Preference number: 5 (lower is better) Translates to: SALRHSGCTRPVQSHGTVFLSFS*KARINM Trigger: CATGTTGATCCTGGCCTTCAATGAGAAGGACAAGAA...TACTGTCCCATGAGACTGTACTGGACGGGTGCAGCCAGAGTGGCGCAGTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| CDS CCA 90 bp | GGACATAGGCCCCTGCTGCCGCCACAAACATACATAGTGCAAAACTaGCATAGACCTTCTTTAGGTGCTGCTGTGTCGAGGGAGTTATGT | + |
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Preference number: 5 (lower is better) Translates to: GHRPLLPPQTYIVQN*HRPSLGAAVSRELC Trigger: ACATAACTCCCTCGACACAGCAGCACCTAAAGAAGGTCTATGCCAGTTTTGCACTATGTATGTTTGTGGCGGCAGCAGGGGCCTATGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000023749.15 ENSMUST00000159209.8 ENSMUST00000159531.3 ENSMUST00000160635.8 ENSMUST00000161250.8 ENSMUST00000161778.8 ENSMUST00000162624.8 |
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| CDS-3UTR CAA 90 bp | GATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGCATGGCTGTGAGGTGTaGCCATCAGCCAAATCATCA | + |
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Preference number: 5 (lower is better) Translates to: DAFIIIEHDTCDVCKETGHGCEV*PSAKSS Trigger: TGATGATTTGGCTGATGGCAACACCTCACAGCCATG...CCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
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| CDS-3UTR CAA 90 bp | TTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGGTGGGGTTCTTGTCCTTCTCATaGAAGGCCAGGATCAACATG | + |
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Preference number: 5 (lower is better) Translates to: FIIIEHDTCDVCKETGVGFLSFS*KARINM Trigger: CATGTTGATCCTGGCCTTCAATGAGAAGGACAAGAA...CCCCACCCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
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| CDS-3UTR CAA 90 bp | TTTCCTGATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAAAGTCCCAGTCTCTTTaGCTCGGTCTCATGGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: FPDAFIIIEHDTCDVCKEKSQSL*LGLMAV Trigger: CACAGCCATGAGACCGAGCAAAAGAGACTGGGACTT...TTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATCAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
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| CDS-3UTR CAA 90 bp | GCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGGTGTTCTTGTCCTTCTCATaGAAGGCCAGGATCAACATG | + |
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Preference number: 5 (lower is better) Translates to: AFIIIEHDTCDVCKETGVFLSFS*KARINM Trigger: CATGTTGATCCTGGCCTTCAATGAGAAGGACAAGAA...CACCCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
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| CDS-3UTR CAA 90 bp | CAACAGGCTTCTGCCCAAAAGACCAAAACTTGCTGGAAACAGGTGAACAAACCCAAGAGGGCATCAAAGTaGATCTTCCGATCAAATATA | + |
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Preference number: 5 (lower is better) Translates to: QQASAQKTKTCWKQVNKPKRASK*IFRSNI Trigger: TATATTTGATCGGAAGATCAACTTTGATGCCCTCTT...GGGTTTGTTCACCTGTTTCCAGCAAGTTTTGGTCTTTTGGGCAGAAGCCTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023749.15 |
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| CDS-3UTR CAA 90 bp | GATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAGAAACAGGGAAGAGGGCATCAAAGTaGATCTTCCGATCAAATATA | + |
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Preference number: 5 (lower is better) Translates to: DAFIIIEHDTCDVCKETGKRASK*IFRSNI Trigger: TATATTTGATCGGAAGATCAACTTTGATGCCCTCTT...CCCTGTTTCTTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023749.15 ENSMUST00000159531.3 ENSMUST00000161250.8 |
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| CDS-3UTR CAA 90 bp | AGCTTTCCTGATGCTTTCATTATCATAGAACACGACACCTGTGATGTGTGCAAAAAGAGGGCATCAAAGTaGATCTTCCGATCAAATATA | + |
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Preference number: 5 (lower is better) Translates to: SFPDAFIIIEHDTCDVCKKRASK*IFRSNI Trigger: TATATTTGATCGGAAGATCAACTTTGATGCCCTCTT...TTTGCACACATCACAGGTGTCGTGTTCTATGATAATGAAAGCATCAGGAAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023749.15 ENSMUST00000161250.8 |
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| CDS CAA 90 bp | CGAGAAGTCCCAGTCTCTTTTGCTCGGTCTCATGGCTGTGAGGTGTaGCCATCAGCCAAATCATCAAGGCCAAGGAGCCCAGGGCGGAGA | + |
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Preference number: 6 (lower is better) Translates to: REVPVSFARSHGCEV*PSAKSSRPRSPGRR Trigger: TCTCCGCCCTGGGCTCCTTGGCCTTGATGATTTGGCTGATGGCAACACCTCACAGCCATGAGACCGAGCAAAAGAGACTGGGACTTCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000023749.15 ENSMUST00000159209.8 ENSMUST00000159531.3 ENSMUST00000160635.8 ENSMUST00000161250.8 ENSMUST00000161778.8 ENSMUST00000162624.8 ENSMUST00000229392.2 |
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| CDS CAA 72 bp | GAGGAAGGCGAAGCCAGCGAGAAGTCCCAGTCTCTTTaGCTCGGTCTCATGGCTGTGAGGTGTTGCCATCAG | + |
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Preference number: 6 (lower is better) Translates to: EEGEASEKSQSL*LGLMAVRCCHQ Trigger: CTGATGGCAACACCTCACAGCCATGAGACCGAGCAAAAGAGACTGGGACTTCTCGCTGGCTTCGCCTTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000023749.15 ENSMUST00000159209.8 ENSMUST00000159531.3 ENSMUST00000160635.8 ENSMUST00000161250.8 ENSMUST00000161778.8 ENSMUST00000162624.8 ENSMUST00000229392.2 |
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| CDS CAA 90 bp | GACTCCTGTGAGGAAGGCGAAGCCAGCGAGAAGTCCCAGTCTCTTTaGCTCGGTCTCATGGCTGTGAGGTGTTGCCATCAGCCAAATCAT | + |
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Preference number: 6 (lower is better) Translates to: DSCEEGEASEKSQSL*LGLMAVRCCHQPNH Trigger: ATGATTTGGCTGATGGCAACACCTCACAGCCATGAGACCGAGCAAAAGAGACTGGGACTTCTCGCTGGCTTCGCCTTCCTCACAGGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000023749.15 ENSMUST00000159209.8 ENSMUST00000159531.3 ENSMUST00000160635.8 ENSMUST00000161250.8 ENSMUST00000161778.8 ENSMUST00000162624.8 ENSMUST00000229392.2 |
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| CDS GCA 72 bp | CAGTCTCTTTTGCTCGGTCTCATGGCTGTGAGGTGTTaGCATCAGCCAAATCATCAAGGCCAAGGAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: QSLLLGLMAVRC*HQPNHQGQGAQ Trigger: CTGGGCTCCTTGGCCTTGATGATTTGGCTGATGGCAACACCTCACAGCCATGAGACCGAGCAAAAGAGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000023749.15 ENSMUST00000159209.8 ENSMUST00000159531.3 ENSMUST00000160635.8 ENSMUST00000161250.8 ENSMUST00000161778.8 ENSMUST00000162624.8 ENSMUST00000229392.2 |
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| CDS CCA 72 bp | GCAGTCCCAGGTACAGGTTTGCCTGGAACAGCCAAATaGAGCCAAAGAAAAGGTTCCCCAGAGAGGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: AVPGTGLPGTAK*SQRKGSPERTG Trigger: TCCTGTCCTCTCTGGGGAACCTTTTCTTTGGCTCCATTTGGCTGTTCCAGGCAAACCTGTACCTGGGACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000023749.15 ENSMUST00000159209.8 ENSMUST00000159531.3 ENSMUST00000160635.8 ENSMUST00000161250.8 ENSMUST00000161778.8 ENSMUST00000162624.8 ENSMUST00000229392.2 |
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| CDS CAA 72 bp | CCAGTCTCTTTTGCTCGGTCTCATGGCTGTGAGGTGTaGCCATCAGCCAAATCATCAAGGCCAAGGAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PVSFARSHGCEV*PSAKSSRPRSP Trigger: TGGGCTCCTTGGCCTTGATGATTTGGCTGATGGCAACACCTCACAGCCATGAGACCGAGCAAAAGAGACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000023749.15 ENSMUST00000159209.8 ENSMUST00000159531.3 ENSMUST00000160635.8 ENSMUST00000161250.8 ENSMUST00000161778.8 ENSMUST00000162624.8 ENSMUST00000229392.2 |
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| CDS CCA 72 bp | CCCCTGCTGCCGCCACAAACATACATAGTGCAAAACTaGCATAGACCTTCTTTAGGTGCTGCTGTGTCGAGG | + |
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Preference number: 6 (lower is better) Translates to: PLLPPQTYIVQN*HRPSLGAAVSR Trigger: CCTCGACACAGCAGCACCTAAAGAAGGTCTATGCCAGTTTTGCACTATGTATGTTTGTGGCGGCAGCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000023749.15 ENSMUST00000159209.8 ENSMUST00000159531.3 ENSMUST00000160635.8 ENSMUST00000161250.8 ENSMUST00000161778.8 ENSMUST00000162624.8 |
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| CDS TCA 72 bp | AGAAGTCCCAGTCTCTTTTGCTCGGTCTCATGGCTGTaGGGTGTTGCCATCAGCCAAATCATCAAGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: RSPSLFCSVSWL*GVAISQIIKAK Trigger: CTTGGCCTTGATGATTTGGCTGATGGCAACACCTCACAGCCATGAGACCGAGCAAAAGAGACTGGGACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000023749.15 ENSMUST00000159209.8 ENSMUST00000159531.3 ENSMUST00000160635.8 ENSMUST00000161250.8 ENSMUST00000161778.8 ENSMUST00000162624.8 ENSMUST00000229392.2 |
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