Pregenerated sensors for TMBIM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006301Ensembl transcript IDs: ENSMUST00000016309.16, ENSMUST00000113796.8, ENSMUST00000128505.2, ENSMUST00000130763.8, ENSMUST00000141560.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTTGGGTCTGGATGGTAGCCAGGCTGGGCGCCAGGCAGGGTGGATaGCATTCTGGTTTAGCCCCCATACTGATGAAACTCTGCTCACTG | + |
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Preference number: 1 (lower is better) Translates to: LWVWMVARLGARQGG*HSGLAPILMKLCSL Trigger: CAGTGAGCAGAGTTTCATCAGTATGGGGGCTAAACCAGAATGGCATCCACCCTGCCTGGCGCCCAGCCTGGCTACCATCCAGACCCAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR GCA 90 bp | GCACCCAAGGCGCTTTCCCTGTCCCCACTTATCTCTCACCCAGACTaGTTCCCAGCCACACCCAGAATCCCACAATCCACCTCTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: APKALSLSPLISHPD*FPATPRIPQSTSVC Trigger: ACACACAGAGGTGGATTGTGGGATTCTGGGTGTGGCTGGGAAGCAGTCTGGGTGAGAGATAAGTGGGGACAGGGAAAGCGCCTTGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR GCA 90 bp | ACACACACCCACACACACCCACCCACACACACACACAGAGTTTGGTaGATACTCGTCATGGGTAAAGGGAAGGAGATACACCTTCAGACT | + |
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Preference number: 1 (lower is better) Translates to: THTHTHPPTHTHRVW*ILVMGKGKEIHLQT Trigger: AGTCTGAAGGTGTATCTCCTTCCCTTTACCCATGACGAGTATGCACCAAACTCTGTGTGTGTGTGTGGGTGGGTGTGTGTGGGTGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR TCA 90 bp | CAGCCGGAGGAGGCACTTGGATTACATAGAAAGCAGCAGCTGGCTTaGAGAGGGGGTTTTAGTCTGAAATCTCCCAATGGGAATACAGAA | + |
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Preference number: 1 (lower is better) Translates to: QPEEALGLHRKQQLA*RGGFSLKSPNGNTE Trigger: TTCTGTATTCCCATTGGGAGATTTCAGACTAAAACCCCCTCTTCAAGCCAGCTGCTGCTTTCTATGTAATCCAAGTGCCTCCTCCGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR TCA 90 bp | GATTACATAGAAAGCAGCAGCTGGCTTGAAGAGGGGGTTTTAGTCTaGAATCTCCCAATGGGAATACAGAACAGATTGAACTTGTGTACC | + |
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Preference number: 1 (lower is better) Translates to: DYIESSSWLEEGVLV*NLPMGIQNRLNLCT Trigger: GGTACACAAGTTCAATCTGTTCTGTATTCCCATTGGGAGATTTCAGACTAAAACCCCCTCTTCAAGCCAGCTGCTGCTTTCTATGTAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGGCACCCAAGGCGCTTTCCCTGTCCCCACTTATCTCTCACCCAGACTGCTAAGGCACTTTGGGTCTaGATGGTAGCCAGGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: RGHPRRFPCPHLSLTQTAKALWV*MVARLG Trigger: GCCCAGCCTGGCTACCATCCAGACCCAAAGTGCCTT...AGCAGTCTGGGTGAGAGATAAGTGGGGACAGGGAAAGCGCCTTGGGTGCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGCACCCAAGGCGCTTTCCCTGTCCCCACTTATCTCTCACCCAGACTGCTAGCATAAGTGGCCTATaGGCACTGGAGCTGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: RGHPRRFPCPHLSLTQTASISGL*ALELEA Trigger: TGCCTCCAGCTCCAGTGCTCATAGGCCACTTATGCT...AGCAGTCTGGGTGAGAGATAAGTGGGGACAGGGAAAGCGCCTTGGGTGCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCAGAGCTCCTGTGTTCACAGGCTCCCTACTCCCCTACACACACCCACACGTGATCCCAGCATCATaGCTCTCACTGAACACAGCC | + |
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Preference number: 2 (lower is better) Translates to: PLRAPVFTGSLLPYTHPHVIPAS*LSLNTA Trigger: GGCTGTGTTCAGTGAGAGCCATGATGCTGGGATCAC...GTGTGGGTGTGTGTAGGGGAGTAGGGAGCCTGTGAACACAGGAGCTCTGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCACCCAAGGCGCTTTCCCTGTCCCCACTTATCTCTCACCCAGACTGCTTACTGGAAGATGGGGTTaGAACAGAGAGACCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: EGTQGAFPVPTYLSPRLLTGRWG*NRETPG Trigger: CCCTGGGGTCTCTCTGTTCCAACCCCATCTTCCAGT...AAGCAGTCTGGGTGAGAGATAAGTGGGGACAGGGAAAGCGCCTTGGGTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGCACCCAAGGCGCTTTCCCTGTCCCCACTTATCTCTCACCCAGACTGCTGGACGGAGAGGAAACTaGGCAGATTACTTGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: RGHPRRFPCPHLSLTQTAGRRGN*ADYLRG Trigger: TCCCCTCAAGTAATCTGCTCAGTTTCCTCTCCGTCC...AGCAGTCTGGGTGAGAGATAAGTGGGGACAGGGAAAGCGCCTTGGGTGCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCAAGGCGCTTTCCCTGTCCCCACTTATCTCTCACCCAGACTGCTTCCCAGCGGACGGAGAGGAAACTaGGCAGATTACTTGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: TQGAFPVPTYLSPRLLPSGRRGN*ADYLRG Trigger: TCCCCTCAAGTAATCTGCTCAGTTTCCTCTCCGTCC...GCTGGGAAGCAGTCTGGGTGAGAGATAAGTGGGGACAGGGAAAGCGCCTTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGGCACCCAAGGCGCTTTCCCTGTCCCCACTTATCTCTCACCCAGACTGCTGTGATCCCAGCATCATaGCTCTCACTGAACACAGCC | + |
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Preference number: 2 (lower is better) Translates to: RGHPRRFPCPHLSLTQTAVIPAS*LSLNTA Trigger: GGCTGTGTTCAGTGAGAGCCATGATGCTGGGATCAC...AGCAGTCTGGGTGAGAGATAAGTGGGGACAGGGAAAGCGCCTTGGGTGCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR TCA 90 bp | TTAAAAGCCTCAGAAGGCCCCAAGGCACTTTGGGTCTGGATGGTAGCCAGGCTGACTGAGCAGATTACTTaGGGGGAGACGGGACCTAGG | + |
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Preference number: 2 (lower is better) Translates to: LKASEGPKALWVWMVARLTEQIT*GETGPR Trigger: CCTAGGTCCCGTCTCCCCTCAAGTAATCTGCTCAGT...CAGCCTGGCTACCATCCAGACCCAAAGTGCCTTGGGGCCTTCTGAGGCTTTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCACCCAAGGCGCTTTCCCTGTCCCCACTTATCTCTCACCCAGACTGCTTAGCATCTGGCTTTATTaGATCCAGGAGGGAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: EGTQGAFPVPTYLSPRLLSIWLY*IQEGDS Trigger: GCTGTCTCCCTCCTGGATCCAATAAAGCCAGATGCT...AAGCAGTCTGGGTGAGAGATAAGTGGGGACAGGGAAAGCGCCTTGGGTGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCCATCCTGGTACCAGCCGGAGGAGGCACTTGGATTACATAGAAAGCAGCAGGCTAAGAGGTGCCAGTaGTCCCAGCATCATGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: FPSWYQPEEALGLHRKQQAKRCQ*SQHHGS Trigger: AGAGCCATGATGCTGGGATCACTGGCACCTCTTAGC...CTGCTGCTTTCTATGTAATCCAAGTGCCTCCTCCGGCTGGTACCAGGATGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGAGGGGAGCCTCTTCCCCTCAGAGCTCCTGTGTTCACAGGCTCCCTACTACACACAGAGTTTGGTaGATACTCGTCATGGGTAAA | + |
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Preference number: 2 (lower is better) Translates to: GGRGASSPQSSCVHRLPTTHRVW*ILVMGK Trigger: TTTACCCATGACGAGTATGCACCAAACTCTGTGTGT...AGTAGGGAGCCTGTGAACACAGGAGCTCTGAGGGGAAGAGGCTCCCCTCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAATAGCTCTAACTATGTCCTTGGGCTAGTAAGGTTTCTACCCCACCTGATAAGCATAAGTGGCCTATaGGCACTGGAGCTGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: QNSSNYVLGLVRFLPHLISISGL*ALELEA Trigger: TGCCTCCAGCTCCAGTGCTCATAGGCCACTTATGCT...TATCAGGTGGGGTAGAAACCTTACTAGCCCAAGGACATAGTTAGAGCTATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR TCA 90 bp | TATTCAGAATCAAGTACTGGACAGAATAGCTCTAACTATGTCCTTGGGCTAGTAACTGAGCAGATTACTTaGGGGGAGACGGGACCTAGG | + |
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Preference number: 2 (lower is better) Translates to: YSESSTGQNSSNYVLGLVTEQIT*GETGPR Trigger: CCTAGGTCCCGTCTCCCCTCAAGTAATCTGCTCAGT...TACTAGCCCAAGGACATAGTTAGAGCTATTCTGTCCAGTACTTGATTCTGAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR CCA 90 bp | TATTCAGAATCAAGTACTGGACAGAATAGCTCTAACTATGTCCTTGGGCTAGTAGTGGCCTATGAGCACTaGAGCTGGAGGCAAAGCATC | + |
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Preference number: 2 (lower is better) Translates to: YSESSTGQNSSNYVLGLVVAYEH*SWRQSI Trigger: GATGCTTTGCCTCCAGCTCCAGTGCTCATAGGCCAC...TACTAGCCCAAGGACATAGTTAGAGCTATTCTGTCCAGTACTTGATTCTGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR CCA 90 bp | TATTCAGAATCAAGTACTGGACAGAATAGCTCTAACTATGTCCTTGGGCTAGTATATGAGCACTGGAGCTaGAGGCAAAGCATCTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: YSESSTGQNSSNYVLGLVYEHWS*RQSIWL Trigger: AAGCCAGATGCTTTGCCTCCAGCTCCAGTGCTCATA...TACTAGCCCAAGGACATAGTTAGAGCTATTCTGTCCAGTACTTGATTCTGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR CCA 72 bp | TTAAAAGCCTCAGAAGGCCCCAAGGCACTTTGGGTCTaGATGGTAGCCAGGCTGGGCGCCAGGCAGGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: LKASEGPKALWV*MVARLGARQGG Trigger: TCCACCCTGCCTGGCGCCCAGCCTGGCTACCATCCAGACCCAAAGTGCCTTGGGGCCTTCTGAGGCTTTTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR CCA 72 bp | GGTCTGGATGGTAGCCAGGCTGGGCGCCAGGCAGGGTaGATGCCATTCTGGTTTAGCCCCCATACTGATGAA | + |
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Preference number: 3 (lower is better) Translates to: GLDGSQAGRQAG*MPFWFSPHTDE Trigger: TTCATCAGTATGGGGGCTAAACCAGAATGGCATCCACCCTGCCTGGCGCCCAGCCTGGCTACCATCCAGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR GCA 72 bp | GCGCTTTCCCTGTCCCCACTTATCTCTCACCCAGACTaGTTCCCAGCCACACCCAGAATCCCACAATCCACC | + |
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Preference number: 3 (lower is better) Translates to: ALSLSPLISHPD*FPATPRIPQST Trigger: GGTGGATTGTGGGATTCTGGGTGTGGCTGGGAAGCAGTCTGGGTGAGAGATAAGTGGGGACAGGGAAAGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR CCA 72 bp | AGCCAGGCTGGGCGCCAGGCAGGGTGGATGCCATTCTaGTTTAGCCCCCATACTGATGAAACTCTGCTCACT | + |
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Preference number: 3 (lower is better) Translates to: SQAGRQAGWMPF*FSPHTDETLLT Trigger: AGTGAGCAGAGTTTCATCAGTATGGGGGCTAAACCAGAATGGCATCCACCCTGCCTGGCGCCCAGCCTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR CCA 72 bp | GTGGCCTATGAGCACTGGAGCTGGAGGCAAAGCATCTaGCTTTATTGGATCCAGGAGGGAGACAGCTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: VAYEHWSWRQSI*LYWIQEGDSSS Trigger: GCTGGAGCTGTCTCCCTCCTGGATCCAATAAAGCCAGATGCTTTGCCTCCAGCTCCAGTGCTCATAGGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR CAA 90 bp | TTAAAAGCCTCAGAAGGCCCCAAGGCACTTTGGGTCTGGATGGTAGCCAGGCTGAAGCATCTGGCTTTATaGGATCCAGGAGGGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: LKASEGPKALWVWMVARLKHLAL*DPGGRQ Trigger: CTGTCTCCCTCCTGGATCCAATAAAGCCAGATGCTT...CAGCCTGGCTACCATCCAGACCCAAAGTGCCTTGGGGCCTTCTGAGGCTTTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAATAGCTCTAACTATGTCCTTGGGCTAGTAAGGTTTCTACCCCACCTGATAAGGCCCCAAGGCACTTaGGGTCTGGATGGTAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: QNSSNYVLGLVRFLPHLIRPQGT*GLDGSQ Trigger: CTGGCTACCATCCAGACCCAAAGTGCCTTGGGGCCT...TATCAGGTGGGGTAGAAACCTTACTAGCCCAAGGACATAGTTAGAGCTATTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR GCA 72 bp | CACACACACCCACCCACACACACACACAGAGTTTGGTaGATACTCGTCATGGGTAAAGGGAAGGAGATACAC | + |
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Preference number: 3 (lower is better) Translates to: HTHPPTHTHRVW*ILVMGKGKEIH Trigger: GTGTATCTCCTTCCCTTTACCCATGACGAGTATGCACCAAACTCTGTGTGTGTGTGTGGGTGGGTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR TCA 72 bp | GAGGCACTTGGATTACATAGAAAGCAGCAGCTGGCTTaGAGAGGGGGTTTTAGTCTGAAATCTCCCAATGGG | + |
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Preference number: 3 (lower is better) Translates to: EALGLHRKQQLA*RGGFSLKSPNG Trigger: CCCATTGGGAGATTTCAGACTAAAACCCCCTCTTCAAGCCAGCTGCTGCTTTCTATGTAATCCAAGTGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR TCA 72 bp | GAAAGCAGCAGCTGGCTTGAAGAGGGGGTTTTAGTCTaGAATCTCCCAATGGGAATACAGAACAGATTGAAC | + |
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Preference number: 3 (lower is better) Translates to: ESSSWLEEGVLV*NLPMGIQNRLN Trigger: GTTCAATCTGTTCTGTATTCCCATTGGGAGATTTCAGACTAAAACCCCCTCTTCAAGCCAGCTGCTGCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| 3UTR-3UTR CAA 90 bp | ACATTTCTAGTTGTGTCCCTCTGTGATATATTCAGAATCAAGTACTGGACAGAAACACACACACAGAGTTaGGTGCATACTCGTCATGGG | + |
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Preference number: 3 (lower is better) Translates to: TFLVVSLCDIFRIKYWTETHTQS*VHTRHG Trigger: CCCATGACGAGTATGCACCAAACTCTGTGTGTGTGT...TTCTGTCCAGTACTTGATTCTGAATATATCACAGAGGGACACAACTAGAAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| CDS-3UTR CCA 90 bp | GGTGGGAGGGGAGCCTCTTCCCCTCAGAGCTCCTGTGTTCACAGGCTCCCTACTACCTGGCAGGACAGATaGCTGCCCGTAGCCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: GGRGASSPQSSCVHRLPTTWQDR*LPVATR Trigger: CCTGGTGGCTACGGGCAGCCATCTGTCCTGCCAGGT...AGTAGGGAGCCTGTGAACACAGGAGCTCTGAGGGGAAGAGGCTCCCCTCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| CDS-3UTR CCA 90 bp | CCCCTCAGAGCTCCTGTGTTCACAGGCTCCCTACTCCCCTACACACACCCACACGGGAGGAACCGGCTGTaGGTAGCCAGCAGGATGACC | + |
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Preference number: 4 (lower is better) Translates to: PLRAPVFTGSLLPYTHPHGRNRL*VASRMT Trigger: GGTCATCCTGCTGGCTACCCACAGCCGGTTCCTCCC...GTGTGGGTGTGTGTAGGGGAGTAGGGAGCCTGTGAACACAGGAGCTCTGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| CDS-3UTR TCA 90 bp | CAGGCTGGGCGCCAGGCAGGGTGGATGCCATTCTGGTTTAGCCCCCATACTGATTGTAGTCCTCCGGGCTaGTGGTGTGCTTCCGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: QAGRQAGWMPFWFSPHTDCSPPG*WCASGS Trigger: GGAACCGGAAGCACACCATCAGCCCGGAGGACTACA...ATCAGTATGGGGGCTAAACCAGAATGGCATCCACCCTGCCTGGCGCCCAGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| CDS-3UTR GCA 90 bp | GGGCCCAGCCCAATAGGAAAGGGTGAGTCCCAGGCCAGTGAAAGGGACATCTCTTCCGGGCTGATGGTGTaGTTCCGGTTCCCCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: GPSPIGKGESQASERDISSGLMV*FRFPRT Trigger: GGTCCTGGGGAACCGGAAGCACACCATCAGCCCGGA...AGAGATGTCCCTTTCACTGGCCTGGGACTCACCCTTTCCTATTGGGCTGGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000128505.2 |
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| CDS-3UTR CCA 90 bp | CTAGGGCCCAGCCCAATAGGAAAGGGTGAGTCCCAGGCCAGTGAAAGGGACATCATGGGAATCGGCGCCTaGGTCCCTGGCAGCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LGPSPIGKGESQASERDIMGIGA*VPGSRQ Trigger: TTGCCTGCTGCCAGGGACCCAGGCGCCGATTCCCAT...GATGTCCCTTTCACTGGCCTGGGACTCACCCTTTCCTATTGGGCTGGGCCCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| CDS-3UTR TCA 90 bp | CTAGGGCCCAGCCCAATAGGAAAGGGTGAGTCCCAGGCCAGTGAAAGGGACATCTGTAGTCCTCCGGGCTaGTGGTGTGCTTCCGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LGPSPIGKGESQASERDICSPPG*WCASGS Trigger: GGAACCGGAAGCACACCATCAGCCCGGAGGACTACA...GATGTCCCTTTCACTGGCCTGGGACTCACCCTTTCCTATTGGGCTGGGCCCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000128505.2 |
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| CDS-3UTR CCA 90 bp | TTAAAAGCCTCAGAAGGCCCCAAGGCACTTTGGGTCTGGATGGTAGCCAGGCTGGGCGGGATAACCACCTaGCAGGACAGATGGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LKASEGPKALWVWMVARLGGITT*QDRWLP Trigger: GGGCAGCCATCTGTCCTGCCAGGTGGTTATCCCGCC...CAGCCTGGCTACCATCCAGACCCAAAGTGCCTTGGGGCCTTCTGAGGCTTTTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| CDS-3UTR CCA 90 bp | CAGGCTGGGCGCCAGGCAGGGTGGATGCCATTCTGGTTTAGCCCCCATACTGATCAAGATGATGTTCCATaGGAATCGGCGCCTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QAGRQAGWMPFWFSPHTDQDDVP*ESAPGS Trigger: GGACCCAGGCGCCGATTCCCATGGAACATCATCTTG...ATCAGTATGGGGGCTAAACCAGAATGGCATCCACCCTGCCTGGCGCCCAGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| CDS-3UTR CCA 90 bp | AGAGTAGACTTCAGTGTTTCTCAGACCAGAGAGGGCACCCAAGGCGCTTTCCCTACCTGGCAGGACAGATaGCTGCCCGTAGCCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: RVDFSVSQTREGTQGAFPTWQDR*LPVATR Trigger: CCTGGTGGCTACGGGCAGCCATCTGTCCTGCCAGGT...AGGGAAAGCGCCTTGGGTGCCCTCTCTGGTCTGAGAAACACTGAAGTCTACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| CDS-3UTR CCA 90 bp | TACTGGAAGATGGGGTTGGAACAGAGAGACCCCAGGGCACAGATCTCTTCTAGCGGGAGGAACCGGCTGTaGGTAGCCAGCAGGATGACC | + |
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Preference number: 4 (lower is better) Translates to: YWKMGLEQRDPRAQISSSGRNRL*VASRMT Trigger: GGTCATCCTGCTGGCTACCCACAGCCGGTTCCTCCC...GCTAGAAGAGATCTGTGCCCTGGGGTCTCTCTGTTCCAACCCCATCTTCCAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| CDS-3UTR TCA 90 bp | GAGGGCACCCAAGGCGCTTTCCCTGTCCCCACTTATCTCTCACCCAGACTGCTTCAAGGGTCAGGTAGGTaGCAAGGAAGACAGCATAGG | + |
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Preference number: 4 (lower is better) Translates to: EGTQGAFPVPTYLSPRLLQGSGR*QGRQHR Trigger: CCTATGCTGTCTTCCTTGTCACCTACCTGACCCTTG...AAGCAGTCTGGGTGAGAGATAAGTGGGGACAGGGAAAGCGCCTTGGGTGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| CDS-3UTR TCA 90 bp | TACTGGAAGATGGGGTTGGAACAGAGAGACCCCAGGGCACAGATCTCTTCTAGCTGTAGTCCTCCGGGCTaGTGGTGTGCTTCCGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: YWKMGLEQRDPRAQISSSCSPPG*WCASGS Trigger: GGAACCGGAAGCACACCATCAGCCCGGAGGACTACA...GCTAGAAGAGATCTGTGCCCTGGGGTCTCTCTGTTCCAACCCCATCTTCCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| CDS-3UTR GCA 90 bp | AGCCCAATAGGAAAGGGTGAGTCCCAGGCCAGTGAAAGGGACATCTCTCTTTCTTCCGGGCTGATGGTGTaGTTCCGGTTCCCCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: SPIGKGESQASERDISLSSGLMV*FRFPRT Trigger: GGTCCTGGGGAACCGGAAGCACACCATCAGCCCGGA...AGAAAGAGAGATGTCCCTTTCACTGGCCTGGGACTCACCCTTTCCTATTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000128505.2 |
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| CDS-3UTR CCA 90 bp | GACTGCTTCCCAGCCACACCCAGAATCCCACAATCCACCTCTGTGTGTCAGAGCGTCCTCATAGGGAGGTaGGGCACTGGGATTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: DCFPATPRIPQSTSVCQSVLIGR*GTGIGH Trigger: ATGTCCAATCCCAGTGCCCCACCTCCCTATGAGGAC...GCTCTGACACACAGAGGTGGATTGTGGGATTCTGGGTGTGGCTGGGAAGCAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGAGGGAGACAGCTCCAGCTCCTAGCCTAGAACCCTGTGGCCGAGGTGGGCACGTATTTGCCGACTaGTTCCACAAAGGTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRRETAPAPSLEPCGRGGHVFAD*FHKGED Trigger: ATCTTCACCTTTGTGGAACCAGTCGGCAAATACGTG...CCCACCTCGGCCACAGGGTTCTAGGCTAGGAGCTGGAGCTGTCTCCCTCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTCAGAGCTCCTGTGTTCACAGGCTCCCTACTCCCCTACACACACCCACACGAAAGCAGAAGATGGTaGCAGAGATGGATACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PLRAPVFTGSLLPYTHPHESRRW*QRWIPQ Trigger: CTGTGGTATCCATCTCTGTCACCATCTTCTGCTTTC...GTGTGGGTGTGTGTAGGGGAGTAGGGAGCCTGTGAACACAGGAGCTCTGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGACAGCATAAGTGGCCTATGAGCACTGGAGCTGGAGGCAAAGCATCTGGCGATGGCCCCCAGAGCTaGATAGACCATGTGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FRQHKWPMSTGAGGKASGDGPQS*IDHVEP Trigger: TGGCTCCACATGGTCTATGCAGCTCTGGGGGCCATC...GCCAGATGCTTTGCCTCCAGCTCCAGTGCTCATAGGCCACTTATGCTGTCTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGACAGCATAAGTGGCCTATGAGCACTGGAGCTGGAGGCAAAGCATCTGGCCAAGATGATGTTCCATaGGAATCGGCGCCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRQHKWPMSTGAGGKASGQDDVP*ESAPGS Trigger: GGACCCAGGCGCCGATTCCCATGGAACATCATCTTG...GCCAGATGCTTTGCCTCCAGCTCCAGTGCTCATAGGCCACTTATGCTGTCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCTATGAGCACTGGAGCTGGAGGCAAAGCATCTGGCTTTATTGGATCCAGGCAAGGGTCAGGTAGGTaGCAAGGAAGACAGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: WPMSTGAGGKASGFIGSRQGSGR*QGRQHR Trigger: CCTATGCTGTCTTCCTTGTCACCTACCTGACCCTTG...CCTGGATCCAATAAAGCCAGATGCTTTGCCTCCAGCTCCAGTGCTCATAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGGCCCAGCCCAATAGGAAAGGGTGAGTCCCAGGCCAGTGAAAGGGACATCAAGTCCACCTTAGTCTaGAAGCAGAAGATGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGPSPIGKGESQASERDIKSTLV*KQKMVT Trigger: TGTCACCATCTTCTGCTTTCAGACTAAGGTGGACTT...GATGTCCCTTTCACTGGCCTGGGACTCACCCTTTCCTATTGGGCTGGGCCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000128505.2 |
||
| CDS-3UTR GCA 90 bp | GACCTAGGGCCCAGCCCAATAGGAAAGGGTGAGTCCCAGGCCAGTGAAAGGGACAGCGGTGATGATCATTaGTATGATGACAGCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DLGPSPIGKGESQASERDSGDDH*YDDSFG Trigger: ACCAAAGCTGTCATCATAGCAATGATCATCACCGCT...GTCCCTTTCACTGGCCTGGGACTCACCCTTTCCTATTGGGCTGGGCCCTAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCAATAGGAAAGGGTGAGTCCCAGGCCAGTGAAAGGGACATCTCTCTTTCTGTCCTCATAGGGAGGTaGGGCACTGGGATTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SPIGKGESQASERDISLSVLIGR*GTGIGH Trigger: ATGTCCAATCCCAGTGCCCCACCTCCCTATGAGGAC...AGAAAGAGAGATGTCCCTTTCACTGGCCTGGGACTCACCCTTTCCTATTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| 3UTR CAA 72 bp | TTCTGTTCCCATCCTGGTACCAGCCGGAGGAGGCACTaGGATTACATAGAAAGCAGCAGCTGGCTTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FCSHPGTSRRRH*DYIESSSWLEE Trigger: CTCTTCAAGCCAGCTGCTGCTTTCTATGTAATCCAAGTGCCTCCTCCGGCTGGTACCAGGATGGGAACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGGGCACCCAAGGCGCTTTCCCTGTCCCCACTTATCTCTCACCCAGACTAGCGGTGATGATCATTaGTATGATGACAGCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QRGHPRRFPCPHLSLTQTSGDDH*YDDSFG Trigger: ACCAAAGCTGTCATCATAGCAATGATCATCACCGCT...AGTCTGGGTGAGAGATAAGTGGGGACAGGGAAAGCGCCTTGGGTGCCCTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR GCA 90 bp | CAGAATAGCTCTAACTATGTCCTTGGGCTAGTAAGGTTTCTACCCCACCTGATATCCGGGCTGATGGTGTaGTTCCGGTTCCCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: QNSSNYVLGLVRFLPHLISGLMV*FRFPRT Trigger: GGTCCTGGGGAACCGGAAGCACACCATCAGCCCGGA...TATCAGGTGGGGTAGAAACCTTACTAGCCCAAGGACATAGTTAGAGCTATTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR CCA 90 bp | CAGAATAGCTCTAACTATGTCCTTGGGCTAGTAAGGTTTCTACCCCACCTGATAATGGGAATCGGCGCCTaGGTCCCTGGCAGCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QNSSNYVLGLVRFLPHLIMGIGA*VPGSRQ Trigger: TTGCCTGCTGCCAGGGACCCAGGCGCCGATTCCCAT...TATCAGGTGGGGTAGAAACCTTACTAGCCCAAGGACATAGTTAGAGCTATTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGGCCCAGCCCAATAGGAAAGGGTGAGTCCCAGGCCAGTGAAAGGGACATCAATACACCTTTTGGATaGAGGAATGTCGAACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGPSPIGKGESQASERDINTPFG*RNVELS Trigger: GGAAAGTTCGACATTCCTTCATCCAAAAGGTGTATT...GATGTCCCTTTCACTGGCCTGGGACTCACCCTTTCCTATTGGGCTGGGCCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGCCCAATAGGAAAGGGTGAGTCCCAGGCCAGTGAAAGGGACATCTCTCTTAAGTCCACCTTAGTCTaGAAGCAGAAGATGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PSPIGKGESQASERDISLKSTLV*KQKMVT Trigger: TGTCACCATCTTCTGCTTTCAGACTAAGGTGGACTT...AAGAGAGATGTCCCTTTCACTGGCCTGGGACTCACCCTTTCCTATTGGGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000128505.2 |
||
| CDS-3UTR GCA 90 bp | ACCCAAGGCGCTTTCCCTGTCCCCACTTATCTCTCACCCAGACTGCTTCCCAGCAAAGCTGTCACTTCCTaGTCTCTCCTCTTCATTATA | + |
|
Preference number: 4 (lower is better) Translates to: TQGAFPVPTYLSPRLLPSKAVTS*SLLFII Trigger: TATAATGAAGAGGAGAGAGCAGGAAGTGACAGCTTT...GCTGGGAAGCAGTCTGGGTGAGAGATAAGTGGGGACAGGGAAAGCGCCTTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCCAATAGGAAAGGGTGAGTCCCAGGCCAGTGAAAGGGACATCTCTCTTCACGTATTTGCCGACTaGTTCCACAAAGGTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPIGKGESQASERDISLHVFAD*FHKGED Trigger: ATCTTCACCTTTGTGGAACCAGTCGGCAAATACGTG...AAGAGAGATGTCCCTTTCACTGGCCTGGGACTCACCCTTTCCTATTGGGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGCTGGAGGCAAAGCATCTGGCTTTATTGGATCCAGGAGGGAGACAGCTACAGTGATGAGCAGCTaGACAGAAATGATGCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: TGAGGKASGFIGSRRETATVMSS*TEMMQY Trigger: GTATTGCATCATTTCTGTCCAGCTGCTCATCACTGT...AGCTGTCTCCCTCCTGGATCCAATAAAGCCAGATGCTTTGCCTCCAGCTCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCATCCTGGTACCAGCCGGAGGAGGCACTTGGATTACATAGAAAGCAGCAGAATACACCTTTTGGATaGAGGAATGTCGAACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPSWYQPEEALGLHRKQQNTPFG*RNVELS Trigger: GGAAAGTTCGACATTCCTTCATCCAAAAGGTGTATT...CTGCTGCTTTCTATGTAATCCAAGTGCCTCCTCCGGCTGGTACCAGGATGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR GCA 90 bp | AGCCCAATAGGAAAGGGTGAGTCCCAGGCCAGTGAAAGGGACATCTCTCTTTCTAAAGCTGTCACTTCCTaGTCTCTCCTCTTCATTATA | + |
|
Preference number: 4 (lower is better) Translates to: SPIGKGESQASERDISLSKAVTS*SLLFII Trigger: TATAATGAAGAGGAGAGAGCAGGAAGTGACAGCTTT...AGAAAGAGAGATGTCCCTTTCACTGGCCTGGGACTCACCCTTTCCTATTGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTCTAGTTGTGTCCCTCTGTGATATATTCAGAATCAAGTACTGGACAGAAACAGTGATGAGCAGCTaGACAGAAATGATGCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: TFLVVSLCDIFRIKYWTETVMSS*TEMMQY Trigger: GTATTGCATCATTTCTGTCCAGCTGCTCATCACTGT...TTCTGTCCAGTACTTGATTCTGAATATATCACAGAGGGACACAACTAGAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR CCA 90 bp | TATTCAGAATCAAGTACTGGACAGAATAGCTCTAACTATGTCCTTGGGCTAGTAATGCAATACACCTTTTaGATGAAGGAATGTCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: YSESSTGQNSSNYVLGLVMQYTF*MKECRT Trigger: AGTTCGACATTCCTTCATCCAAAAGGTGTATTGCAT...TACTAGCCCAAGGACATAGTTAGAGCTATTCTGTCCAGTACTTGATTCTGAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTCTAGTTGTGTCCCTCTGTGATATATTCAGAATCAAGTACTGGACAGAAATGCAATACACCTTTTaGATGAAGGAATGTCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TFLVVSLCDIFRIKYWTEMQYTF*MKECRT Trigger: AGTTCGACATTCCTTCATCCAAAAGGTGTATTGCAT...TTCTGTCCAGTACTTGATTCTGAATATATCACAGAGGGACACAACTAGAAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS CCA 90 bp | ACCGTAACCAGGTTGAGGGTAGGCAGGGTAGGCGGGATAACCACCTaGCAGGACAGATGGCTGCCCGTAGCCACCAGGAGGTGGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TVTRLRVGRVGGITT*QDRWLPVATRRWRA Trigger: GGCTCTCCACCTCCTGGTGGCTACGGGCAGCCATCTGTCCTGCCAGGTGGTTATCCCGCCTACCCTGCCTACCCTCAACCTGGTTACGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000130763.8 ENSMUST00000141560.2 |
||
| CDS-3UTR CAA 90 bp | CGGGACCTAGGGCCCAGCCCAATAGGAAAGGGTGAGTCCCAGGCCAGTGAAAGGATGACCGTAACCAGGTaGAGGGTAGGCAGGGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RDLGPSPIGKGESQASERMTVTR*RVGRVG Trigger: GCCTACCCTGCCTACCCTCAACCTGGTTACGGTCAT...CCTTTCACTGGCCTGGGACTCACCCTTTCCTATTGGGCTGGGCCCTAGGTCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS CCA 90 bp | ATGGCCGTAGTTCATGGGCATTGGATGGACGGGAGGAACCGGCTGTaGGTAGCCAGCAGGATGACCGTAACCAGGTTGAGGGTAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MAVVHGHWMDGRNRL*VASRMTVTRLRVGR Trigger: CCTGCCTACCCTCAACCTGGTTACGGTCATCCTGCTGGCTACCCACAGCCGGTTCCTCCCGTCCATCCAATGCCCATGAACTACGGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000130763.8 ENSMUST00000141560.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGCACCCAAGGCGCTTTCCCTGTCCCCACTTATCTCTCACCCAGACTGCTTATGACCGTAACCAGGTaGAGGGTAGGCAGGGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EGTQGAFPVPTYLSPRLLMTVTR*RVGRVG Trigger: GCCTACCCTGCCTACCCTCAACCTGGTTACGGTCAT...AAGCAGTCTGGGTGAGAGATAAGTGGGGACAGGGAAAGCGCCTTGGGTGCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGGCCCAGCCCAATAGGAAAGGGTGAGTCCCAGGCCAGTGAAAGGGACATCCGTAGTTCATGGGCATaGGATGGACGGGAGGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: LGPSPIGKGESQASERDIRSSWA*DGREEP Trigger: CGGTTCCTCCCGTCCATCCAATGCCCATGAACTACG...GATGTCCCTTTCACTGGCCTGGGACTCACCCTTTCCTATTGGGCTGGGCCCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS CCA 90 bp | TGCTCTCTCCTCTTCATTATAGTCATGGCCGTAGTTCATGGGCATTaGATGGACGGGAGGAACCGGCTGTGGGTAGCCAGCAGGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: CSLLFIIVMAVVHGH*MDGRNRLWVASRMT Trigger: GGTCATCCTGCTGGCTACCCACAGCCGGTTCCTCCCGTCCATCCAATGCCCATGAACTACGGCCATGACTATAATGAAGAGGAGAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000130763.8 ENSMUST00000141560.2 |
||
| CDS-3UTR CAA 90 bp | TACTGGAAGATGGGGTTGGAACAGAGAGACCCCAGGGCACAGATCTCTTCTAGCCGTAGTTCATGGGCATaGGATGGACGGGAGGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: YWKMGLEQRDPRAQISSSRSSWA*DGREEP Trigger: CGGTTCCTCCCGTCCATCCAATGCCCATGAACTACG...GCTAGAAGAGATCTGTGCCCTGGGGTCTCTCTGTTCCAACCCCATCTTCCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS GCA 90 bp | AACTTTCCGGTCATCCCATTCTCCAGGACGAAAGCTGTCACTTCCTaGTCTCTCCTCTTCATTATAGTCATGGCCGTAGTTCATGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: NFPVIPFSRTKAVTS*SLLFIIVMAVVHGH Trigger: ATGCCCATGAACTACGGCCATGACTATAATGAAGAGGAGAGAGCAGGAAGTGACAGCTTTCGTCCTGGAGAATGGGATGACCGGAAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000130763.8 ENSMUST00000141560.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAGCTGGAGGCAAAGCATCTGGCTTTATTGGATCCAGGAGGGAGACAGCTCGCTATGATGACAGCTTaGGTTTCATACATACTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LELEAKHLALLDPGGRQLAMMTA*VSYILE Trigger: TTCCAGTATGTATGAAACCAAAGCTGTCATCATAGC...GAGCTGTCTCCCTCCTGGATCCAATAAAGCCAGATGCTTTGCCTCCAGCTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS GCA 90 bp | GCAGAAGATGGTGACAGAGATGGATACCACAGCGGTGATGATCATTaGTATGATGACAGCTTTGGTTTCATACATACTGGAAATAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AEDGDRDGYHSGDDH*YDDSFGFIHTGNSA Trigger: GGCACTATTTCCAGTATGTATGAAACCAAAGCTGTCATCATAGCAATGATCATCACCGCTGTGGTATCCATCTCTGTCACCATCTTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS CCA 90 bp | TCCACAAAGGTGAAGATTGCAATGATGGCCACAGTGATGAGCAGCTaGACAGAAATGATGCAATACACCTTTTGGATGAAGGAATGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: STKVKIAMMATVMSS*TEMMQYTFWMKECR Trigger: TCGACATTCCTTCATCCAAAAGGTGTATTGCATCATTTCTGTCCAGCTGCTCATCACTGTGGCCATCATTGCAATCTTCACCTTTGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS CCA 72 bp | GGCAGGGTAGGCGGGATAACCACCTGGCAGGACAGATaGCTGCCCGTAGCCACCAGGAGGTGGAGAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRVGGITTWQDR*LPVATRRWRAR Trigger: CCTGGCTCTCCACCTCCTGGTGGCTACGGGCAGCCATCTGTCCTGCCAGGTGGTTATCCCGCCTACCCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000130763.8 ENSMUST00000141560.2 |
||
| CDS CAA 90 bp | GGGAGGAACCGGCTGTGGGTAGCCAGCAGGATGACCGTAACCAGGTaGAGGGTAGGCAGGGTAGGCGGGATAACCACCTGGCAGGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: GRNRLWVASRMTVTR*RVGRVGGITTWQDR Trigger: TCTGTCCTGCCAGGTGGTTATCCCGCCTACCCTGCCTACCCTCAACCTGGTTACGGTCATCCTGCTGGCTACCCACAGCCGGTTCCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000130763.8 ENSMUST00000141560.2 |
||
| CDS CAA 72 bp | CGGCTGTGGGTAGCCAGCAGGATGACCGTAACCAGGTaGAGGGTAGGCAGGGTAGGCGGGATAACCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RLWVASRMTVTR*RVGRVGGITTW Trigger: CCAGGTGGTTATCCCGCCTACCCTGCCTACCCTCAACCTGGTTACGGTCATCCTGCTGGCTACCCACAGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000130763.8 ENSMUST00000141560.2 |
||
| CDS CCA 72 bp | CTCTTCATTATAGTCATGGCCGTAGTTCATGGGCATTaGATGGACGGGAGGAACCGGCTGTGGGTAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LFIIVMAVVHGH*MDGRNRLWVAS Trigger: GCTGGCTACCCACAGCCGGTTCCTCCCGTCCATCCAATGCCCATGAACTACGGCCATGACTATAATGAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000130763.8 ENSMUST00000141560.2 |
||
| CDS CCA 72 bp | AGCCAAAGTAAAGATGGTGAGCAAGATGATGTTCCATaGGAATCGGCGCCTGGGTCCCTGGCAGCAGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SQSKDGEQDDVP*ESAPGSLAAGK Trigger: CTTGCCTGCTGCCAGGGACCCAGGCGCCGATTCCCATGGAACATCATCTTGCTCACCATCTTTACTTTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
||
| CDS CAA 72 bp | CCTCTTCATTATAGTCATGGCCGTAGTTCATGGGCATaGGATGGACGGGAGGAACCGGCTGTGGGTAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PLHYSHGRSSWA*DGREEPAVGSQ Trigger: CTGGCTACCCACAGCCGGTTCCTCCCGTCCATCCAATGCCCATGAACTACGGCCATGACTATAATGAAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000130763.8 ENSMUST00000141560.2 |
||
| CDS CCA 72 bp | CTCTCTCCTCTTCATTATAGTCATGGCCGTAGTTCATaGGCATTGGATGGACGGGAGGAACCGGCTGTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSPLHYSHGRSS*ALDGREEPAVG Trigger: ACCCACAGCCGGTTCCTCCCGTCCATCCAATGCCCATGAACTACGGCCATGACTATAATGAAGAGGAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000130763.8 ENSMUST00000141560.2 |
||
| CDS GCA 72 bp | GTCATCCCATTCTCCAGGACGAAAGCTGTCACTTCCTaGTCTCTCCTCTTCATTATAGTCATGGCCGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: VIPFSRTKAVTS*SLLFIIVMAVV Trigger: AACTACGGCCATGACTATAATGAAGAGGAGAGAGCAGGAAGTGACAGCTTTCGTCCTGGAGAATGGGATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 ENSMUST00000130763.8 ENSMUST00000141560.2 |
||
| CDS CCA 72 bp | GTACACAGCCACATTGTTCCTCACGTATTTGCCGACTaGTTCCACAAAGGTGAAGATTGCAATGATGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VHSHIVPHVFAD*FHKGEDCNDGH Trigger: GTGGCCATCATTGCAATCTTCACCTTTGTGGAACCAGTCGGCAAATACGTGAGGAACAATGTGGCTGTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| CDS GCA 72 bp | GGTGACAGAGATGGATACCACAGCGGTGATGATCATTaGTATGATGACAGCTTTGGTTTCATACATACTGGA | + |
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Preference number: 6 (lower is better) Translates to: GDRDGYHSGDDH*YDDSFGFIHTG Trigger: TCCAGTATGTATGAAACCAAAGCTGTCATCATAGCAATGATCATCACCGCTGTGGTATCCATCTCTGTCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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| CDS CAA 90 bp | GAGATGGATACCACAGCGGTGATGATCATTGCTATGATGACAGCTTaGGTTTCATACATACTGGAAATAGTGCCTGTCACAAAGCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: EMDTTAVMIIAMMTA*VSYILEIVPVTKPK Trigger: TTTGGGCTTTGTGACAGGCACTATTTCCAGTATGTATGAAACCAAAGCTGTCATCATAGCAATGATCATCACCGCTGTGGTATCCATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016309.16 ENSMUST00000113796.8 |
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