Pregenerated sensors for TMA16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025591Ensembl transcript IDs: ENSMUST00000026681.7, ENSMUST00000143972.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGTCCAACTGCTCTACCTCCCGCACTGCACGGCTGTCAGGTCGGATaGGGCACAGCTCCTTCCTTGCCAAGCTCTCATTGCTTGCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: RPTALPPALHGCQVG*GTAPSLPSSHCLQP Trigger: GGGCTGCAAGCAATGAGAGCTTGGCAAGGAAGGAGCTGTGCCCCATCCGACCTGACAGCCGTGCAGTGCGGGAGGTAGAGCAGTTGGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
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| 3UTR GCA 90 bp | CCGCACTGCACGGCTGTCAGGTCGGATGGGGCACAGCTCCTTCCTTaGCAAGCTCTCATTGCTTGCAGCCCAGGGAGGTTTTGTAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: PHCTAVRSDGAQLLP*QALIACSPGRFCRD Trigger: GTCTCTACAAAACCTCCCTGGGCTGCAAGCAATGAGAGCTTGGCAAGGAAGGAGCTGTGCCCCATCCGACCTGACAGCCGTGCAGTGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
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| 3UTR GCA 90 bp | ACTGGGATTATGGGCACATGGCAACAGCCCCTTGATCACTGTGGGTaGTGGGAAGACTCAGGCACTCTGCTGCACTTCACTGACCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: TGIMGTWQQPLDHCG*WEDSGTLLHFTDQA Trigger: GGCCTGGTCAGTGAAGTGCAGCAGAGTGCCTGAGTCTTCCCAGCACCCACAGTGATCAAGGGGCTGTTGCCATGTGCCCATAATCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR CCA 90 bp | GGGATTATGGGCACATGGCAACAGCCCCTTGATCACTGTGGGTGCTaGGAAGACTCAGGCACTCTGCTGCACTTCACTGACCAGGCCATC | + |
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Preference number: 1 (lower is better) Translates to: GIMGTWQQPLDHCGC*EDSGTLLHFTDQAI Trigger: GATGGCCTGGTCAGTGAAGTGCAGCAGAGTGCCTGAGTCTTCCCAGCACCCACAGTGATCAAGGGGCTGTTGCCATGTGCCCATAATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR CCA 90 bp | ATCTCTACCCACCCTCCCTTCCACAGCACTGGGATTATGGGCACATaGCAACAGCCCCTTGATCACTGTGGGTGCTGGGAAGACTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: ISTHPPFHSTGIMGT*QQPLDHCGCWEDSG Trigger: GCCTGAGTCTTCCCAGCACCCACAGTGATCAAGGGGCTGTTGCCATGTGCCCATAATCCCAGTGCTGTGGAAGGGAGGGTGGGTAGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR TCA 90 bp | TCCCTTCCACAGCACTGGGATTATGGGCACATGGCAACAGCCCCTTaGTCACTGTGGGTGCTGGGAAGACTCAGGCACTCTGCTGCACTT | + |
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Preference number: 1 (lower is better) Translates to: SLPQHWDYGHMATAP*SLWVLGRLRHSAAL Trigger: AAGTGCAGCAGAGTGCCTGAGTCTTCCCAGCACCCACAGTGATCAAGGGGCTGTTGCCATGTGCCCATAATCCCAGTGCTGTGGAAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR GCA 90 bp | AAAAAGTGTAAGGAGTATGAGCAGTGGGTGAGTCTCACGTCCAACTaGTCTACCTCCCGCACTGCACGGCTGTCAGGTCGGATGGGGCAC | + |
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Preference number: 1 (lower is better) Translates to: KKCKEYEQWVSLTSN*STSRTARLSGRMGH Trigger: GTGCCCCATCCGACCTGACAGCCGTGCAGTGCGGGAGGTAGAGCAGTTGGACGTGAGACTCACCCACTGCTCATACTCCTTACACTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
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| 3UTR TCA 90 bp | CTGAGGCAGATAAAGTTTGCACGACCAATGGGCCTCTCTTGCCACTaGTGGCCGACTTGGCCATCTTCTGCTACATATGCAGCTAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: LRQIKFARPMGLSCH*WPTWPSSATYAARD Trigger: GTCTCTAGCTGCATATGTAGCAGAAGATGGCCAAGTCGGCCATCAGTGGCAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTGCCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR TCA 90 bp | TCCCAGAATGCACTTTTAAAAAGTGTAAGGAGTATGAGCAGTGGGTaGGTCTCACGTCCAACTGCTCTACCTCCCGCACTGCACGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: SQNALLKSVRSMSSG*VSRPTALPPALHGC Trigger: ACAGCCGTGCAGTGCGGGAGGTAGAGCAGTTGGACGTGAGACTCACCCACTGCTCATACTCCTTACACTTTTTAAAAGTGCATTCTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
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| 3UTR CCA 90 bp | CCCACCTCAGAAATGCTCTATAGCCTTCAGAAGAGCACCAGAAGGTaGACACTGAGGGCTCAAGGCATGAGCCTACGGGGACATTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: PTSEMLYSLQKSTRR*TLRAQGMSLRGHLK Trigger: TTTTAAATGTCCCCGTAGGCTCATGCCTTGAGCCCTCAGTGTCCACCTTCTGGTGCTCTTCTGAAGGCTATAGAGCATTTCTGAGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR TCA 90 bp | ATGAGGGCTGACAGGCACTGGAGTCATTTCTTCATCCGTGTCACTTaGTTCACTTGCTGGTTCCAGTTTCCCATCTGTAGTGGCTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: MRADRHWSHFFIRVT*FTCWFQFPICSGSS Trigger: ACTGGAGCCACTACAGATGGGAAACTGGAACCAGCAAGTGAATCAAGTGACACGGATGAAGAAATGACTCCAGTGCCTGTCAGCCCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143972.2 |
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| 3UTR GCA 90 bp | TTCAGAGCCAAGAGGACTCTAGGGCAACATATAGACCTTCCTGTTTaGTGGCTTCCTATCTTGCCTGCCCCATCCACCTCCGATATATGT | + |
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Preference number: 1 (lower is better) Translates to: FRAKRTLGQHIDLPV*WLPILPAPSTSDIC Trigger: ACATATATCGGAGGTGGATGGGGCAGGCAAGATAGGAAGCCAGCAAACAGGAAGGTCTATATGTTGCCCTAGAGTCCTCTTGGCTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR CCA 90 bp | AGAGCCAAGAGGACTCTAGGGCAACATATAGACCTTCCTGTTTGCTaGCTTCCTATCTTGCCTGCCCCATCCACCTCCGATATATGTTTC | + |
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Preference number: 1 (lower is better) Translates to: RAKRTLGQHIDLPVC*LPILPAPSTSDICF Trigger: GAAACATATATCGGAGGTGGATGGGGCAGGCAAGATAGGAAGCCAGCAAACAGGAAGGTCTATATGTTGCCCTAGAGTCCTCTTGGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR CCA 90 bp | AGCTATATCAGGGTCCTTTCAGCAAAATCTTGCCAGTGTATGCAATaGTGTCAGCGTTTGGAGGCTGATTATGGGGTGGATCCCTGGGTA | + |
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Preference number: 1 (lower is better) Translates to: SYIRVLSAKSCQCMQ*CQRLEADYGVDPWV Trigger: TACCCAGGGATCCACCCCATAATCAGCCTCCAAACGCTGACACCATTGCATACACTGGCAAGATTTTGCTGAAAGGACCCTGATATAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR GCA 90 bp | GAGAAAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCCAGTGTATaGAATGGTGTCAGCGTTTGGAGGCTGATTATGGGGTGGATCCCT | + |
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Preference number: 1 (lower is better) Translates to: EKAISGSFQQNLASV*NGVSVWRLIMGWIP Trigger: AGGGATCCACCCCATAATCAGCCTCCAAACGCTGACACCATTGCATACACTGGCAAGATTTTGCTGAAAGGACCCTGATATAGCTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR GCA 90 bp | CCCTGGGTATGGCAGTTTCTAGATGGTCCATCCTTTCGTCTCAGCTaGAAACTTTGTTACTCCTTCCATGGGTGTTTTGTTCCCAATTCT | + |
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Preference number: 1 (lower is better) Translates to: PWVWQFLDGPSFRLS*KLCYSFHGCFVPNS Trigger: AGAATTGGGAACAAAACACCCATGGAAGGAGTAACAAAGTTTGCAGCTGAGACGAAAGGATGGACCATCTAGAAACTGCCATACCCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR GCA 90 bp | AGTCTCACAAGAGAAAGCTATATCAGGGTCCTTTCAGCAAAATCTTaGCAGTGTATGCAATGGTGTCAGCGTTTGGAGGCTGATTATGGG | + |
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Preference number: 1 (lower is better) Translates to: SLTRESYIRVLSAKS*QCMQWCQRLEADYG Trigger: CCCATAATCAGCCTCCAAACGCTGACACCATTGCATACACTGGCAAGATTTTGCTGAAAGGACCCTGATATAGCTTTCTCTTGTGAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR GCA 90 bp | GTGTCTGCTTTCTTAGGGTCGCCTCCAGTGTGTTTACAGGGAATATaGTTACATATTCATACACAGGTATCCCTGCAGGTTCCCAAGTTA | + |
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Preference number: 1 (lower is better) Translates to: VSAFLGSPPVCLQGI*LHIHTQVSLQVPKL Trigger: TAACTTGGGAACCTGCAGGGATACCTGTGTATGAATATGTAAGCATATTCCCTGTAAACACACTGGAGGCGACCCTAAGAAAGCAGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
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| 3UTR GCA 90 bp | ACTTCTGTTTGTCACAGTTCCTGCAGCAACTTGACAAGGACTTCTTaGCTGGTGACAGATTTGGCTAGATTCAGGGTATGTAAAACCTTC | + |
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Preference number: 1 (lower is better) Translates to: TSVCHSSCSNLTRTS*LVTDLARFRVCKTF Trigger: GAAGGTTTTACATACCCTGAATCTAGCCAAATCTGTCACCAGGCAAGAAGTCCTTGTCAAGTTGCTGCAGGAACTGTGACAAACAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR CCA 90 bp | AACGGAAAGATTTCAGGCAAGATCTGGGTCTCAGAGAAAACAATATaGAGTAGGGTTTGCTTGCCCGTGAAATGCAAACAGTGCAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: NGKISGKIWVSEKTI*SRVCLPVKCKQCSK Trigger: TTTGCTGCACTGTTTGCATTTCACGGGCAAGCAAACCCTACTCCATATTGTTTTCTCTGAGACCCAGATCTTGCCTGAAATCTTTCCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
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| 3UTR CCA 90 bp | TTACCCAGCTGGTGGGCCAGCTCAACTGGATTAACTCTTATGTCTTaGGTAACTTGGCCAGGAGTAAATAACATTCTTTTGACCAAAAAG | + |
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Preference number: 1 (lower is better) Translates to: LPSWWASSTGLTLMS*VTWPGVNNILLTKK Trigger: CTTTTTGGTCAAAAGAATGTTATTTACTCCTGGCCAAGTTACCCAAGACATAAGAGTTAATCCAGTTGAGCTGGCCCACCAGCTGGGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
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| 3UTR CCA 90 bp | ACTGCACTAGGTTACTATTTAGACTCTAAGCTAAGTTCCCAGTACTaGGTATTTGGCTATAATGAAAAGCAGACTAACACAATCTCTGTA | + |
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Preference number: 1 (lower is better) Translates to: TALGYYLDSKLSSQY*VFGYNEKQTNTISV Trigger: TACAGAGATTGTGTTAGTCTGCTTTTCATTATAGCCAAATACCCAGTACTGGGAACTTAGCTTAGAGTCTAAATAGTAACCTAGTGCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR-3UTR TCA 90 bp | GACCAATGGGCCTCTCTTGCCACTGATGGCCGACTTGGCCATCTTCTGCTACATAATCCTGAGGCGGGGTaGGGCCCTAGGGCGGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: DQWASLATDGRLGHLLLHNPEAG*GPRAVV Trigger: AACCACCGCCCTAGGGCCTCACCCCGCCTCAGGATT...ATGTAGCAGAAGATGGCCAAGTCGGCCATCAGTGGCAAGAGAGGCCCATTGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR-3UTR TCA 90 bp | CTACCCACCCCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGGGGTTTGCTTGCCCGTaGAATGCAAACAGTGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LPTPTPTSWPWHSPVLRQGFACP*NANSAA Trigger: TGCTGCACTGTTTGCATTTCACGGGCAAGCAAACCC...CTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGGGTGGGTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
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| 3UTR-3UTR CCA 90 bp | CTACCCACCCCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGTCCCTTCCACAGCACTaGGATTATGGGCACATGGCA | + |
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Preference number: 2 (lower is better) Translates to: LPTPTPTSWPWHSPVLRQSLPQH*DYGHMA Trigger: TGCCATGTGCCCATAATCCCAGTGCTGTGGAAGGGA...CTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGGGTGGGTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR CAA 90 bp | CTCCCTTCCACAGCACTGGGATTATGGGCACATGGCAACAGCCCCTaGATCACTGTGGGTGCTGGGAAGACTCAGGCACTCTGCTGCACT | + |
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Preference number: 2 (lower is better) Translates to: LPSTALGLWAHGNSP*ITVGAGKTQALCCT Trigger: AGTGCAGCAGAGTGCCTGAGTCTTCCCAGCACCCACAGTGATCAAGGGGCTGTTGCCATGTGCCCATAATCCCAGTGCTGTGGAAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR CAA 90 bp | CTGTCAGGTCGGATGGGGCACAGCTCCTTCCTTGCCAAGCTCTCATaGCTTGCAGCCCAGGGAGGTTTTGTAGAGACTTCCAGGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LSGRMGHSSFLAKLS*LAAQGGFVETSRLG Trigger: TCCCAGCCTGGAAGTCTCTACAAAACCTCCCTGGGCTGCAAGCAATGAGAGCTTGGCAAGGAAGGAGCTGTGCCCCATCCGACCTGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
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| 3UTR-3UTR GCA 90 bp | GGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGAGGCCTCCCGGGAATGGTaGCGCCTTCCCTGCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: GLQIPLAPWLLSLAPPLEASREW*RLPCLS Trigger: AGACAGGCAGGGAAGGCGGCACCATTCCCGGGAGGC...CTCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143972.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGGAAGACTCAGGCACTCTGCTGCACTTCACTGACCAGGCCATCTTCCTTATGGCAACAGCCCCTTaGTCACTGTGGGTGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: CWEDSGTLLHFTDQAIFLMATAP*SLWVLG Trigger: TCCCAGCACCCACAGTGATCAAGGGGCTGTTGCCAT...AAGGAAGATGGCCTGGTCAGTGAAGTGCAGCAGAGTGCCTGAGTCTTCCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR-3UTR GCA 90 bp | GACCAATGGGCCTCTCTTGCCACTGATGGCCGACTTGGCCATCTTCTGCTACATGTAGTCAGGCTTGGCTaGAAGCCCCCTCCTGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: DQWASLATDGRLGHLLLHVVRLG*KPPPAK Trigger: CTTAGCAGGAGGGGGCTTGCAGCCAAGCCTGACTAC...ATGTAGCAGAAGATGGCCAAGTCGGCCATCAGTGGCAAGAGAGGCCCATTGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR-3UTR GCA 90 bp | CATCCATCTCTACCCACCCTCCCTTCCACAGCACTGGGATTATGGGCACATGGCTGGTGCCGCCTTCCCTaGCTGTCTTTGATGCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: HPSLPTLPSTALGLWAHGWCRLP*LSLMLF Trigger: GAACAGCATCAAAGACAGGCAGGGAAGGCGGCACCA...GCCATGTGCCCATAATCCCAGTGCTGTGGAAGGGAGGGTGGGTAGAGATGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143972.2 |
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| 3UTR-3UTR CCA 90 bp | CACGGCTGTCAGGTCGGATGGGGCACAGCTCCTTCCTTGCCAAGCTCTCATTGCTGCCAGTGTATGCAATaGTGTCAGCGTTTGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: HGCQVGWGTAPSLPSSHCCQCMQ*CQRLEA Trigger: AGCCTCCAAACGCTGACACCATTGCATACACTGGCA...GCAATGAGAGCTTGGCAAGGAAGGAGCTGTGCCCCATCCGACCTGACAGCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
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| 3UTR-3UTR GCA 90 bp | TTAACTGGCTCTCTCCCATGTGCTGATGTTCAGAGCCAAGAGGACTCTAGGGCAGCTGGCTTCCTATCTTaGCTGCCCCATCCACCTCCG | + |
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Preference number: 2 (lower is better) Translates to: LTGSLPCADVQSQEDSRAAGFLS*LPHPPP Trigger: CGGAGGTGGATGGGGCAGGCAAGATAGGAAGCCAGC...TGCCCTAGAGTCCTCTTGGCTCTGAACATCAGCACATGGGAGAGAGCCAGTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR-3UTR GCA 90 bp | CTACCCACCCCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAGACCTTCCTGTTTaGTGGCTTCCTATCTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LPTPTPTSWPWHSPVLRQIDLPV*WLPILP Trigger: AGGCAAGATAGGAAGCCAGCAAACAGGAAGGTCTAT...CTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGGGTGGGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR-3UTR GCA 90 bp | CATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCCTCTCTTGCGTAGTCAGGCTTGGCTaGAAGCCCCCTCCTGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: HSPVLRQIKFARPMGLSCVVRLG*KPPPAK Trigger: CTTAGCAGGAGGGGGCTTGCAGCCAAGCCTGACTAC...GCAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTTCATCCATCTCTACCCACCCTCCCTTCCACAGCACTGGGATTATGGGCACACTCAGGCACTCTGCTaGACTTCACTGACCAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LFIHLYPPSLPQHWDYGHTQALC*TSLTRP Trigger: TGGCCTGGTCAGTGAAGTGCAGCAGAGTGCCTGAGT...GTGCCCATAATCCCAGTGCTGTGGAAGGGAGGGTGGGTAGAGATGGATGAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR CAA 90 bp | CCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCCTCTCTaGCCACTGATGGCCGACTTGGCCATCTTCTGCTACATATGCAGC | + |
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Preference number: 2 (lower is better) Translates to: PCTEADKVCTTNGPL*PLMADLAIFCYICS Trigger: GCTGCATATGTAGCAGAAGATGGCCAAGTCGGCCATCAGTGGCAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR-3UTR TCA 90 bp | TATGATGTAGGCCATGCTGTGATACAGACAGAGAAGTCTCATCAGAACTGCACTAATCCTGAGGCGGGGTaGGGCCCTAGGGCGGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: YDVGHAVIQTEKSHQNCTNPEAG*GPRAVV Trigger: AACCACCGCCCTAGGGCCTCACCCCGCCTCAGGATT...AGTGCAGTTCTGATGAGACTTCTCTGTCTGTATCACAGCATGGCCTACATCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR-3UTR GCA 90 bp | AGATGGTCCATCCTTTCGTCTCAGCTGCAAACTTTGTTACTCCTTCCATGGGTGGCTGGCTTCCTATCTTaGCTGCCCCATCCACCTCCG | + |
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Preference number: 2 (lower is better) Translates to: RWSILSSQLQTLLLLPWVAGFLS*LPHPPP Trigger: CGGAGGTGGATGGGGCAGGCAAGATAGGAAGCCAGC...CACCCATGGAAGGAGTAACAAAGTTTGCAGCTGAGACGAAAGGATGGACCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR-3UTR TCA 90 bp | CATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCCTCTCTTGCGCTCCAGCTCACTGCTaGACCGATCCAAGTACCTTT | + |
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Preference number: 2 (lower is better) Translates to: HSPVLRQIKFARPMGLSCAPAHC*TDPSTF Trigger: AAAGGTACTTGGATCGGTTCAGCAGTGAGCTGGAGC...GCAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143972.2 |
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| 3UTR-3UTR TCA 90 bp | CATCCATCTCTACCCACCCTCCCTTCCACAGCACTGGGATTATGGGCACATGGCTTCCCTGCCTGTCTTTaGTGCTGTTCTGTAACTCAA | + |
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Preference number: 2 (lower is better) Translates to: HPSLPTLPSTALGLWAHGFPACL*CCSVTQ Trigger: TTGAGTTACAGAACAGCATCAAAGACAGGCAGGGAA...GCCATGTGCCCATAATCCCAGTGCTGTGGAAGGGAGGGTGGGTAGAGATGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143972.2 |
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| 3UTR-3UTR GCA 90 bp | TTAACTGGCTCTCTCCCATGTGCTGATGTTCAGAGCCAAGAGGACTCTAGGGCACTTGATCACTGTGGGTaGTGGGAAGACTCAGGCACT | + |
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Preference number: 2 (lower is better) Translates to: LTGSLPCADVQSQEDSRALDHCG*WEDSGT Trigger: AGTGCCTGAGTCTTCCCAGCACCCACAGTGATCAAG...TGCCCTAGAGTCCTCTTGGCTCTGAACATCAGCACATGGGAGAGAGCCAGTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR-3UTR CCA 90 bp | CTACCCACCCCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGAAAAGCCTTTTTGACTaGTACTCTCCAACAATGATC | + |
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Preference number: 2 (lower is better) Translates to: LPTPTPTSWPWHSPVLRQKSLFD*YSPTMI Trigger: GATCATTGTTGGAGAGTACCAGTCAAAAAGGCTTTT...CTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGGGTGGGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGTATGCAATGGTGTCAGCGTTTGGAGGCTGATTATGGGGTGGATCCCTGGGAATGGTGTCAGCGTTTaGAGGCTGATTATGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SVCNGVSVWRLIMGWIPGNGVSV*RLIMGW Trigger: CCACCCCATAATCAGCCTCCAAACGCTGACACCATT...CCCAGGGATCCACCCCATAATCAGCCTCCAAACGCTGACACCATTGCATACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGAAAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCCAGTGTATGCAATACGGCCTCCCGGGAATaGTGCCGCCTTCCCTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: QEKAISGSFQQNLASVCNTASRE*CRLPCL Trigger: CAGGCAGGGAAGGCGGCACCATTCCCGGGAGGCCGT...ATTGCATACACTGGCAAGATTTTGCTGAAAGGACCCTGATATAGCTTTCTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143972.2 |
||
| 3UTR CAA 90 bp | GGTTTGGTAGCACTGCCCCTTCTGAGTACTTTAGCTCACGGGGACTaGAGACAGCAGTCTTCACTTCTGCTTGTTCATCCATCTCTACCC | + |
|
Preference number: 2 (lower is better) Translates to: GLVALPLLSTLAHGD*RQQSSLLLVHPSLP Trigger: GGGTAGAGATGGATGAACAAGCAGAAGTGAAGACTGCTGTCTCAAGTCCCCGTGAGCTAAAGTACTCAGAAGGGGCAGTGCTACCAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CCA 90 bp | CACGGCTGTCAGGTCGGATGGGGCACAGCTCCTTCCTTGCCAAGCTCTCATTGCGGTATTCTAAGTTTCTaGGCTGATATCCACTTATCA | + |
|
Preference number: 2 (lower is better) Translates to: HGCQVGWGTAPSLPSSHCGILSF*ADIHLS Trigger: TGATAAGTGGATATCAGCCCAGAAACTTAGAATACC...GCAATGAGAGCTTGGCAAGGAAGGAGCTGTGCCCCATCCGACCTGACAGCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR-3UTR TCA 90 bp | TTAACTGGCTCTCTCCCATGTGCTGATGTTCAGAGCCAAGAGGACTCTAGGGCAATGTGCCATGGTCACTaGGTAGAACATGAAGGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LTGSLPCADVQSQEDSRAMCHGH*VEHEGL Trigger: GAGACCTTCATGTTCTACTCAGTGACCATGGCACAT...TGCCCTAGAGTCCTCTTGGCTCTGAACATCAGCACATGGGAGAGAGCCAGTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAACTGGCTCTCTCCCATGTGCTGATGTTCAGAGCCAAGAGGACTCTAGGGCATGGATAAACGGCCATTaGAGACCACTGCTGTTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LTGSLPCADVQSQEDSRAWINGH*RPLLFS Trigger: GGAAAACAGCAGTGGTCTTCAATGGCCGTTTATCCA...TGCCCTAGAGTCCTCTTGGCTCTGAACATCAGCACATGGGAGAGAGCCAGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGAGAGTCTCCATGGTCCCTaGATAGTCCCAACTGTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: GLQIPLAPWLLSLAPPLESLHGP*IVPTVQ Trigger: TTGAACAGTTGGGACTATTCAGGGACCATGGAGACT...CTCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCGTGGATCCCTGGGTATaGCAGTTTCTAGATGGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: STYRVADPFSSLATFSSSVDPWV*QFLDGP Trigger: TGGACCATCTAGAAACTGCCATACCCAGGGATCCAC...GGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGAGGCCCCATTGTGTGCAGGTaGATTTGTAGCATCCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VADPFSSLATFSSSSIGGPIVCR*ICSILS Trigger: AGAAAGGATGCTACAAATTCACCTGCACACAATGGG...GCCTCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGCATGAGCCTACGGGGACATTTAAAATTCAAAGCACAGCATTCTACCTTTATGGCAACAGCCCCTTaGTCACTGTGGGTGCTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: QGMSLRGHLKFKAQHSTFMATAP*SLWVLG Trigger: TCCCAGCACCCACAGTGATCAAGGGGCTGTTGCCAT...AAAGGTAGAATGCTGTGCTTTGAATTTTAAATGTCCCCGTAGGCTCATGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCATCCATCTCTACCCACCCTCCCTTCCACAGCACTGGGATTATGGGCACATGACTTCCAATACACAGTaGCACAGAGTAAAAATGCCG | + |
|
Preference number: 2 (lower is better) Translates to: FIHLYPPSLPQHWDYGHMTSNTQ*HRVKMP Trigger: CGGCATTTTTACTCTGTGTCACTGTGTATTGGAAGT...CATGTGCCCATAATCCCAGTGCTGTGGAAGGGAGGGTGGGTAGAGATGGATGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCAGTCTCCATGGTCCCTaGATAGTCCCAACTGTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: STYRVADPFSSLATFSSSSLHGP*IVPTVQ Trigger: TTGAACAGTTGGGACTATTCAGGGACCATGGAGACT...GGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTGTATGCAATGGTGTCAGCGTTTGGAGGCTGATTATGGGGTGGATCCCTGGGAAGGAAAGTATATGCTaGCTCAGTTTCAGAGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: SVCNGVSVWRLIMGWIPGKESIC*LSFRGT Trigger: AGTCCCTCTGAAACTGAGTCAGCATATACTTTCCTT...CCCAGGGATCCACCCCATAATCAGCCTCCAAACGCTGACACCATTGCATACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCGTGTTTGCTAGGCCCTaGCATAGTCTCACAAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: STYRVADPFSSLATFSSSVFARP*HSLTRE Trigger: TTCTCTTGTGAGACTATGTCAGGGCCTAGCAAACAC...GGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTAACTGCACCTGGGCCCAGCTTTCTAGGGGGAAAGTACATTATCTCATTAAAACTCAGGCACTCTGCTaGACTTCACTGACCAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SNCTWAQLSRGKVHYLIKTQALC*TSLTRP Trigger: TGGCCTGGTCAGTGAAGTGCAGCAGAGTGCCTGAGT...TTTAATGAGATAATGTACTTTCCCCCTAGAAAGCTGGGCCCAGGTGCAGTTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR-3UTR CCA 90 bp | AATAGTAACTGCACCTGGGCCCAGCTTTCTAGGGGGAAAGTACATTATCTCATTGATCACTGTGGGTGCTaGGAAGACTCAGGCACTCTG | + |
|
Preference number: 2 (lower is better) Translates to: NSNCTWAQLSRGKVHYLIDHCGC*EDSGTL Trigger: CAGAGTGCCTGAGTCTTCCCAGCACCCACAGTGATC...AATGAGATAATGTACTTTCCCCCTAGAAAGCTGGGCCCAGGTGCAGTTACTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR-3UTR CCA 90 bp | AATAGTAACTGCACCTGGGCCCAGCTTTCTAGGGGGAAAGTACATTATCTCATTACAGCACTGGGATTATaGGCACATGGCAACAGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: NSNCTWAQLSRGKVHYLITALGL*AHGNSP Trigger: GGGGCTGTTGCCATGTGCCCATAATCCCAGTGCTGT...AATGAGATAATGTACTTTCCCCCTAGAAAGCTGGGCCCAGGTGCAGTTACTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR-3UTR CCA 90 bp | GCACAGCATTCTACCTTTGGCCATCCCAAAATGAGTTTAGTTAACCACCGCCACAGGGCTGACAGGCACTaGAGTCATTTCTTCATCCGT | + |
|
Preference number: 2 (lower is better) Translates to: AQHSTFGHPKMSLVNHRHRADRH*SHFFIR Trigger: ACGGATGAAGAAATGACTCCAGTGCCTGTCAGCCCT...GTGGCGGTGGTTAACTAAACTCATTTTGGGATGGCCAAAGGTAGAATGCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143972.2 |
||
| 3UTR CAA 90 bp | CTCAGTTTCAGAGGGACTTCTGTTTGTCACAGTTCCTGCAGCAACTaGACAAGGACTTCTTGCCTGGTGACAGATTTGGCTAGATTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LSFRGTSVCHSSCSN*TRTSCLVTDLARFR Trigger: CCTGAATCTAGCCAAATCTGTCACCAGGCAAGAAGTCCTTGTCAAGTTGCTGCAGGAACTGTGACAAACAGAAGTCCCTCTGAAACTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CAA 90 bp | TCATATTGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTaGGCTACTTTCTCTAGCTCCTCCATTGGAGGCCCTGTGATCCAT | + |
|
Preference number: 2 (lower is better) Translates to: SYCCSTYRVADPFSS*ATFSSSSIGGPVIH Trigger: ATGGATCACAGGGCCTCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | AGATGGTCCATCCTTTCGTCTCAGCTGCAAACTTTGTTACTCCTTCCATGGGTGTGGATAAACGGCCATTaGAGACCACTGCTGTTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: RWSILSSQLQTLLLLPWVWINGH*RPLLFS Trigger: GGAAAACAGCAGTGGTCTTCAATGGCCGTTTATCCA...CACCCATGGAAGGAGTAACAAAGTTTGCAGCTGAGACGAAAGGATGGACCATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGAGGCACTTCCAATACACAGTaGCACAGAGTAAAAATGCCG | + |
|
Preference number: 2 (lower is better) Translates to: VADPFSSLATFSSSSIGGTSNTQ*HRVKMP Trigger: CGGCATTTTTACTCTGTGTCACTGTGTATTGGAAGT...GCCTCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAACTGGCTCTCTCCCATGTGCTGATGTTCAGAGCCAAGAGGACTCTAGGGCAAGCAGTCTTCACTTCTaGTTGTTCATCCATCTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: LTGSLPCADVQSQEDSRASSLHF*LFIHLY Trigger: GTAGAGATGGATGAACAAGCAGAAGTGAAGACTGCT...TGCCCTAGAGTCCTCTTGGCTCTGAACATCAGCACATGGGAGAGAGCCAGTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGGCATGAGCCTACGGGGACATTTAAAATTCAAAGCACAGCATTCTACCTTGATCACTGTGGGTGCTaGGAAGACTCAGGCACTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SRHEPTGTFKIQSTAFYLDHCGC*EDSGTL Trigger: CAGAGTGCCTGAGTCTTCCCAGCACCCACAGTGATC...AAGGTAGAATGCTGTGCTTTGAATTTTAAATGTCCCCGTAGGCTCATGCCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CAA 90 bp | CCTTTCGTCTCAGCTGCAAACTTTGTTACTCCTTCCATGGGTGTTTaGTTCCCAATTCTAAGAAGGGGCAAAGTGGCCACACTTTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: PFVSAANFVTPSMGV*FPILRRGKVATLWS Trigger: AGACCAAAGTGTGGCCACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTAACAAAGTTTGCAGCTGAGACGAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | CACAAGAGAAAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCCAGTGTATGCACTCTCTCCCATGTGCTaGTGTTCAGAGCCAAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: HKRKLYQGPFSKILPVYALSPMC*CSEPRG Trigger: TCCTCTTGGCTCTGAACATCAGCACATGGGAGAGAG...TGCATACACTGGCAAGATTTTGCTGAAAGGACCCTGATATAGCTTTCTCTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGAGTAGGGTTTGCTTGCCCGTGAAATGCAAACAGTGCAGCAAAAGAATACAGGGACTTCTTGCCTGGTaGCAGATTTGGCTAGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: WSRVCLPVKCKQCSKRIQGLLAW*QIWLDS Trigger: TGAATCTAGCCAAATCTGTCACCAGGCAAGAAGTCC...CTGTATTCTTTTGCTGCACTGTTTGCATTTCACGGGCAAGCAAACCCTACTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR-3UTR TCA 90 bp | GTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGTTCCTGCAGCAACTTaGCAAGGACTTCTTGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VSSYCCSTYRVADPFSSLVPAAT*QGLLAW Trigger: CCAGGCAAGAAGTCCTTGTCAAGTTGCTGCAGGAAC...CAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGAACTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGCTTCCTATCTTGCCTaGCCCATCCACCTCCGATAT | + |
|
Preference number: 2 (lower is better) Translates to: VSSYCCSTYRVADPFSSLASYLA*PIHLRY Trigger: ATATCGGAGGTGGATGGGGCAGGCAAGATAGGAAGC...CAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGAACTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR GCA 90 bp | GTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCCTTGATCACTGTGGGTaGTGGGAAGACTCAGGCACT | + |
|
Preference number: 2 (lower is better) Translates to: VLVSSYCCSTYRVADPFSLDHCG*WEDSGT Trigger: AGTGCCTGAGTCTTCCCAGCACCCACAGTGATCAAG...GCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR GCA 90 bp | AGATGGTCCATCCTTTCGTCTCAGCTGCAAACTTTGTTACTCCTTCCATGGGTGTTGACAAGGACTTCTTaGCTGGTGACAGATTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RWSILSSQLQTLLLLPWVLTRTS*LVTDLA Trigger: AGCCAAATCTGTCACCAGGCAAGAAGTCCTTGTCAA...CACCCATGGAAGGAGTAACAAAGTTTGCAGCTGAGACGAAAGGATGGACCATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTAACTGCACCTGGGCCCAGCTTTCTAGGGGGAAAGTACATTATCTCATTAAACAAGCTCTCATTGCTTaGAGCCCAGGGAGGTTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: SNCTWAQLSRGKVHYLIKQALIA*SPGRFC Trigger: ACAAAACCTCCCTGGGCTGCAAGCAATGAGAGCTTG...TTTAATGAGATAATGTACTTTCCCCCTAGAAAGCTGGGCCCAGGTGCAGTTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR-3UTR CCA 90 bp | CACAAGAGAAAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCCAGTGTATGCATCCCTTCCACAGCACTaGGATTATGGGCACATGGCA | + |
|
Preference number: 2 (lower is better) Translates to: HKRKLYQGPFSKILPVYASLPQH*DYGHMA Trigger: TGCCATGTGCCCATAATCCCAGTGCTGTGGAAGGGA...TGCATACACTGGCAAGATTTTGCTGAAAGGACCCTGATATAGCTTTCTCTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTAACTGCACCTGGGCCCAGCTTTCTAGGGGGAAAGTACATTATCTCATTAAAAAGGAGTATGAGCAGTaGGTGAGTCTCACGTCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: SNCTWAQLSRGKVHYLIKKEYEQ*VSLTSN Trigger: GTTGGACGTGAGACTCACCCACTGCTCATACTCCTT...TTTAATGAGATAATGTACTTTCCCCCTAGAAAGCTGGGCCCAGGTGCAGTTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR CAA 90 bp | ACTCTAGGGCAACATATAGACCTTCCTGTTTGCTGGCTTCCTATCTaGCCTGCCCCATCCACCTCCGATATATGTTTCTATGACTATGAT | + |
|
Preference number: 2 (lower is better) Translates to: TLGQHIDLPVCWLPI*PAPSTSDICFYDYD Trigger: ATCATAGTCATAGAAACATATATCGGAGGTGGATGGGGCAGGCAAGATAGGAAGCCAGCAAACAGGAAGGTCTATATGTTGCCCTAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CAA 90 bp | AGTTCCTGCAGCAACTTGACAAGGACTTCTTGCCTGGTGACAGATTaGGCTAGATTCAGGGTATGTAAAACCTTCAAAGACCTGTCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: SSCSNLTRTSCLVTD*ARFRVCKTFKDLSL Trigger: TAGGGACAGGTCTTTGAAGGTTTTACATACCCTGAATCTAGCCAAATCTGTCACCAGGCAAGAAGTCCTTGTCAAGTTGCTGCAGGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGAGGCGTGTGCTTCCTGAACTaGTATTTGAAAGATGGATTT | + |
|
Preference number: 2 (lower is better) Translates to: VADPFSSLATFSSSSIGGVCFLN*YLKDGF Trigger: AAATCCATCTTTCAAATATCAGTTCAGGAAGCACAC...GCCTCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGAGGGTCTTCGTTCTTCTTaGGTTTCATGTGTTTTACAA | + |
|
Preference number: 2 (lower is better) Translates to: GLQIPLAPWLLSLAPPLEGLRSS*VSCVLQ Trigger: TTGTAAAACACATGAAACTCAAGAAGAACGAAGACC...CTCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGTAGGGTTTGCTTGCCCGTGAAATGCAAACAGTGCAGCAAAAGAATACAGTTGACAAGGACTTCTTaGCTGGTGACAGATTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: WSRVCLPVKCKQCSKRIQLTRTS*LVTDLA Trigger: AGCCAAATCTGTCACCAGGCAAGAAGTCCTTGTCAA...CTGTATTCTTTTGCTGCACTGTTTGCATTTCACGGGCAAGCAAACCCTACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR-3UTR GCA 90 bp | AGATGGTCCATCCTTTCGTCTCAGCTGCAAACTTTGTTACTCCTTCCATGGGTGGCGCTTCTTAGGAACTaGATCATCAGCACAAAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: RWSILSSQLQTLLLLPWVALLRN*IISTKF Trigger: AAACTTTGTGCTGATGATGCAGTTCCTAAGAAGCGC...CACCCATGGAAGGAGTAACAAAGTTTGCAGCTGAGACGAAAGGATGGACCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143972.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGAGGCCTAAGTTCCCAGTACTaGGTATTTGGCTATAATGAA | + |
|
Preference number: 2 (lower is better) Translates to: VADPFSSLATFSSSSIGGLSSQY*VFGYNE Trigger: TTCATTATAGCCAAATACCCAGTACTGGGAACTTAG...GCCTCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCACAGCATTCTACCTTTaGCCATCCCAAAATGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: STYRVADPFSSLATFSSSTAFYL*PSQNEF Trigger: AAACTCATTTTGGGATGGCCAAAGGTAGAATGCTGT...GGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CCA 90 bp | TCATTGCTTGCAGCCCAGGGAGGTTTTGTAGAGACTTCCAGGCTGGGAGAACTCATCCAAATTCTTAACTaGGGGGAAACTAAAAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SLLAAQGGFVETSRLGELIQILN*GETKRK Trigger: TTTCCTTTTAGTTTCCCCCCAGTTAAGAATTTGGAT...GAGTTCTCCCAGCCTGGAAGTCTCTACAAAACCTCCCTGGGCTGCAAGCAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR-3UTR CCA 90 bp | GTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCAATGGTGTCAGCGTTTaGAGGCTGATTATGGGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: VLVSSYCCSTYRVADPFSNGVSV*RLIMGW Trigger: CCACCCCATAATCAGCCTCCAAACGCTGACACCATT...GCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGTGCCAGTGTATGCAATaGTGTCAGCGTTTGGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: VSSYCCSTYRVADPFSSLCQCMQ*CQRLEA Trigger: AGCCTCCAAACGCTGACACCATTGCATACACTGGCA...CAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGAACTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CAA 90 bp | CTAAAAGGAAAGTATATGCTGACTCAGTTTCAGAGGGACTTCTGTTaGTCACAGTTCCTGCAGCAACTTGACAAGGACTTCTTGCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LKGKYMLTQFQRDFC*SQFLQQLDKDFLPG Trigger: ACCAGGCAAGAAGTCCTTGTCAAGTTGCTGCAGGAACTGTGACAAACAGAAGTCCCTCTGAAACTGAGTCAGCATATACTTTCCTTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | CACAAGAGAAAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCCAGTGTATGCAATGTGCCATGGTCACTaGGTAGAACATGAAGGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: HKRKLYQGPFSKILPVYAMCHGH*VEHEGL Trigger: GAGACCTTCATGTTCTACTCAGTGACCATGGCACAT...TGCATACACTGGCAAGATTTTGCTGAAAGGACCCTGATATAGCTTTCTCTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | TATGATGTAGGCCATGCTGTGATACAGACAGAGAAGTCTCATCAGAACTGCACTTATTTCAATGAGGGCTaGCAGGCACTGGAGTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: YDVGHAVIQTEKSHQNCTYFNEG*QALESF Trigger: AAATGACTCCAGTGCCTGTCAGCCCTCATTGAAATA...AGTGCAGTTCTGATGAGACTTCTCTGTCTGTATCACAGCATGGCCTACATCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143972.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCCTCTCTTGCATCCAAATTCTTAACTaGGGGGAAACTAAAAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: HSPVLRQIKFARPMGLSCIQILN*GETKRK Trigger: TTTCCTTTTAGTTTCCCCCCAGTTAAGAATTTGGAT...GCAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAAGGCATGAGCCTACGGGGACATTTAAAATTCAAAGCACAGCATTCTACCTTCCCATTGTGTGCAGGTaGATTTGTAGCATCCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SRHEPTGTFKIQSTAFYLPIVCR*ICSILS Trigger: AGAAAGGATGCTACAAATTCACCTGCACACAATGGG...AAGGTAGAATGCTGTGCTTTGAATTTTAAATGTCCCCGTAGGCTCATGCCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR TCA 90 bp | AGATGGTCCATCCTTTCGTCTCAGCTGCAAACTTTGTTACTCCTTCCATGGGTGGGTCTTCGTTCTTCTTaGGTTTCATGTGTTTTACAA | + |
|
Preference number: 2 (lower is better) Translates to: RWSILSSQLQTLLLLPWVGLRSS*VSCVLQ Trigger: TTGTAAAACACATGAAACTCAAGAAGAACGAAGACC...CACCCATGGAAGGAGTAACAAAGTTTGCAGCTGAGACGAAAGGATGGACCATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGATAGACCTTCCTGTTTaGTGGCTTCCTATCTTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: VSSYCCSTYRVADPFSSLIDLPV*WLPILP Trigger: AGGCAAGATAGGAAGCCAGCAAACAGGAAGGTCTAT...CAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGAACTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGAATCTTGCCAGTGTATaGAATGGTGTCAGCGTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: VSSYCCSTYRVADPFSSLNLASV*NGVSVW Trigger: CCAAACGCTGACACCATTGCATACACTGGCAAGATT...CAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGAACTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCTTTCTAGGGGGAAAGTACATTATCTCATTAAAGGGATCAGTAATCCTCTATGCACAGCTCCTTCCTTaGCAAGCTCTCATTGCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: SFLGGKYIISLKGSVILYAQLLP*QALIAC Trigger: GCAAGCAATGAGAGCTTGGCAAGGAAGGAGCTGTGC...ATAGAGGATTACTGATCCCTTTAATGAGATAATGTACTTTCCCCCTAGAAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR-3UTR GCA 90 bp | CAAGGCATGAGCCTACGGGGACATTTAAAATTCAAAGCACAGCATTCTACCTTTAGCAGTCTTCACTTCTaGTTGTTCATCCATCTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: QGMSLRGHLKFKAQHSTFSSLHF*LFIHLY Trigger: GTAGAGATGGATGAACAAGCAGAAGTGAAGACTGCT...AAAGGTAGAATGCTGTGCTTTGAATTTTAAATGTCCCCGTAGGCTCATGCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGTCCTTTCGTCTCAGCTaGAAACTTTGTTACTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: VSSYCCSTYRVADPFSSLSFRLS*KLCYSF Trigger: GAAGGAGTAACAAAGTTTGCAGCTGAGACGAAAGGA...CAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGAACTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CCA 90 bp | AATAGTAACTGCACCTGGGCCCAGCTTTCTAGGGGGAAAGTACATTATCTCATTAAAAGCCTTTTTGACTaGTACTCTCCAACAATGATC | + |
|
Preference number: 2 (lower is better) Translates to: NSNCTWAQLSRGKVHYLIKSLFD*YSPTMI Trigger: GATCATTGTTGGAGAGTACCAGTCAAAAAGGCTTTT...AATGAGATAATGTACTTTCCCCCTAGAAAGCTGGGCCCAGGTGCAGTTACTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR-3UTR CCA 90 bp | CCATCCTTTCGTCTCAGCTGCAAACTTTGTTACTCCTTCCATGGGTGTTTTGTTGGTATTCTAAGTTTCTaGGCTGATATCCACTTATCA | + |
|
Preference number: 2 (lower is better) Translates to: PSFRLSCKLCYSFHGCFVGILSF*ADIHLS Trigger: TGATAAGTGGATATCAGCCCAGAAACTTAGAATACC...AACAAAACACCCATGGAAGGAGTAACAAAGTTTGCAGCTGAGACGAAAGGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGTTGTTACTCCTTCCATaGGTGTTTTGTTCCCAATTC | + |
|
Preference number: 2 (lower is better) Translates to: VSSYCCSTYRVADPFSSLLLLLP*VFCSQF Trigger: GAATTGGGAACAAAACACCCATGGAAGGAGTAACAA...CAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGAACTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR GCA 90 bp | AATAGTAACTGCACCTGGGCCCAGCTTTCTAGGGGGAAAGTACATTATCTCATTTTTTATTTGTGTGCATaGATACACACACTTCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: NSNCTWAQLSRGKVHYLIFYLCA*IHTLPI Trigger: AATGGGAAGTGTGTGTATGCATGCACACAAATAAAA...AATGAGATAATGTACTTTCCCCCTAGAAAGCTGGGCCCAGGTGCAGTTACTATT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGGCATGAGCCTACGGGGACATTTAAAATTCAAAGCACAGCATTCTACCTTCTAAGTTCCCAGTACTaGGTATTTGGCTATAATGAA | + |
|
Preference number: 2 (lower is better) Translates to: SRHEPTGTFKIQSTAFYLLSSQY*VFGYNE Trigger: TTCATTATAGCCAAATACCCAGTACTGGGAACTTAG...AAGGTAGAATGCTGTGCTTTGAATTTTAAATGTCCCCGTAGGCTCATGCCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAGAAAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCCAGTGTATGCAATACAGCATTCTACCTTTaGCCATCCCAAAATGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: QEKAISGSFQQNLASVCNTAFYL*PSQNEF Trigger: AAACTCATTTTGGGATGGCCAAAGGTAGAATGCTGT...ATTGCATACACTGGCAAGATTTTGCTGAAAGGACCCTGATATAGCTTTCTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAGAAAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCCAGTGTATGCAATTTGTTACTCCTTCCATaGGTGTTTTGTTCCCAATTC | + |
|
Preference number: 2 (lower is better) Translates to: QEKAISGSFQQNLASVCNLLLLP*VFCSQF Trigger: GAATTGGGAACAAAACACCCATGGAAGGAGTAACAA...ATTGCATACACTGGCAAGATTTTGCTGAAAGGACCCTGATATAGCTTTCTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR GCA 90 bp | TCAAGGCATGAGCCTACGGGGACATTTAAAATTCAAAGCACAGCATTCTACCTTTTTTATTTGTGTGCATaGATACACACACTTCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: SRHEPTGTFKIQSTAFYLFYLCA*IHTLPI Trigger: AATGGGAAGTGTGTGTATGCATGCACACAAATAAAA...AAGGTAGAATGCTGTGCTTTGAATTTTAAATGTCCCCGTAGGCTCATGCCTTGA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CAA 90 bp | ATTCTAAGAAGGGGCAAAGTGGCCACACTTTGGTCTTCGTTCTTCTaGAGTTTCATGTGTTTTACAAATTGTATCTTCTATCTTGGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: ILRRGKVATLWSSFF*SFMCFTNCIFYLGY Trigger: ATACCCAAGATAGAAGATACAATTTGTAAAACACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGCCACTTTGCCCCTTCTTAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTTCTAGGGGGAAAGTACATTATCTCATTAAAGGGATCAGTAATCCTCTATTTAACTCTTATGTCTTaGGTAACTTGGCCAGGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: SFLGGKYIISLKGSVILYLTLMS*VTWPGV Trigger: TACTCCTGGCCAAGTTACCCAAGACATAAGAGTTAA...ATAGAGGATTACTGATCCCTTTAATGAGATAATGTACTTTCCCCCTAGAAAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR CCA 72 bp | GCTCTACCTCCCGCACTGCACGGCTGTCAGGTCGGATaGGGCACAGCTCCTTCCTTGCCAAGCTCTCATTGC | + |
|
Preference number: 3 (lower is better) Translates to: ALPPALHGCQVG*GTAPSLPSSHC Trigger: GCAATGAGAGCTTGGCAAGGAAGGAGCTGTGCCCCATCCGACCTGACAGCCGTGCAGTGCGGGAGGTAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR CCA 72 bp | CACCCTCCCTTCCACAGCACTGGGATTATGGGCACATaGCAACAGCCCCTTGATCACTGTGGGTGCTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HPPFHSTGIMGT*QQPLDHCGCWE Trigger: TTCCCAGCACCCACAGTGATCAAGGGGCTGTTGCCATGTGCCCATAATCCCAGTGCTGTGGAAGGGAGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR GCA 72 bp | GATTCTCTGACTCAAGCTTCAGTAGTCAGGCTTGGCTaGAAGCCCCCTCCTGCTAAGCCATGTCACCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DSLTQASVVRLG*KPPPAKPCHQP Trigger: GGGCTGGTGACATGGCTTAGCAGGAGGGGGCTTGCAGCCAAGCCTGACTACTGAAGCTTGAGTCAGAGAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR GCA 72 bp | ATGGGCACATGGCAACAGCCCCTTGATCACTGTGGGTaGTGGGAAGACTCAGGCACTCTGCTGCACTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: MGTWQQPLDHCG*WEDSGTLLHFT Trigger: AGTGAAGTGCAGCAGAGTGCCTGAGTCTTCCCAGCACCCACAGTGATCAAGGGGCTGTTGCCATGTGCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR GCA 72 bp | GCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTaGACGACCAATGGGCCTCTCTTGCCACTGATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ALAFPCTEADKV*TTNGPLLPLMA Trigger: GGCCATCAGTGGCAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR CCA 72 bp | TCTCTACCCACCCTCCCTTCCACAGCACTGGGATTATaGGCACATGGCAACAGCCCCTTGATCACTGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SLPTLPSTALGL*AHGNSPLITVG Trigger: ACCCACAGTGATCAAGGGGCTGTTGCCATGTGCCCATAATCCCAGTGCTGTGGAAGGGAGGGTGGGTAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAGGGTATGTAAAACCTTCAAAGACCTGTCCCTACTGACAGCCAGGCCCCACTGCTGGCTTCCTATCTaGCCTGCCCCATCCACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FRVCKTFKDLSLLTARPHCWLPI*PAPSTS Trigger: GGAGGTGGATGGGGCAGGCAAGATAGGAAGCCAGCA...GTGGGGCCTGGCTGTCAGTAGGGACAGGTCTTTGAAGGTTTTACATACCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR-3UTR CAA 90 bp | GTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGAGGCCATGGCAACAGCCCCTaGATCACTGTGGGTGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VADPFSSLATFSSSSIGGHGNSP*ITVGAG Trigger: CCCAGCACCCACAGTGATCAAGGGGCTGTTGCCATG...GCCTCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CCA 72 bp | GAAATGCTCTATAGCCTTCAGAAGAGCACCAGAAGGTaGACACTGAGGGCTCAAGGCATGAGCCTACGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: EMLYSLQKSTRR*TLRAQGMSLRG Trigger: TCCCCGTAGGCTCATGCCTTGAGCCCTCAGTGTCCACCTTCTGGTGCTCTTCTGAAGGCTATAGAGCATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATGGTCCATCCTTTCGTCTCAGCTGCAAACTTTGTTACTCCTTCCATGGGTGTGCTGGCTTCCTATCTaGCCTGCCCCATCCACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RWSILSSQLQTLLLLPWVCWLPI*PAPSTS Trigger: GGAGGTGGATGGGGCAGGCAAGATAGGAAGCCAGCA...CACCCATGGAAGGAGTAACAAAGTTTGCAGCTGAGACGAAAGGATGGACCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CCA 72 bp | CGTTTGGAGGCTGATTATGGGGTGGATCCCTGGGTATaGCAGTTTCTAGATGGTCCATCCTTTCGTCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RLEADYGVDPWV*QFLDGPSFRLS Trigger: GCTGAGACGAAAGGATGGACCATCTAGAAACTGCCATACCCAGGGATCCACCCCATAATCAGCCTCCAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CCA 72 bp | GTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTaGCTACTTTCTCTAGCTCCTCCATTGGAGGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VPPIGLQIPLAP*LLSLAPPLEAL Trigger: CAGGGCCTCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | CTACCCACCCCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATGACTGTGAAACCATaGAAGTTTGTCACCAATAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPTPTPTSWPWHSPVLRQMTVKP*KFVTNK Trigger: CTTATTGGTGACAAACTTCAATGGTTTCACAGTCAT...CTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGGGTGGGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTCTTCACTTCTGCTTGTTCATCCATCTCTACCCACCCTCCCTTCCACAGCTATAGACCTTCCTGTTaGCTGGCTTCCTATCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: AVFTSACSSISTHPPFHSYRPSC*LASYLA Trigger: GGCAAGATAGGAAGCCAGCAAACAGGAAGGTCTATA...GCTGTGGAAGGGAGGGTGGGTAGAGATGGATGAACAAGCAGAAGTGAAGACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGAGTGGAGTAGGGTTTGCTaGCCCGTGAAATGCAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: GLQIPLAPWLLSLAPPLEWSRVC*PVKCKQ Trigger: CTGTTTGCATTTCACGGGCAAGCAAACCCTACTCCA...CTCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR TCA 72 bp | TTGCCAGTGTATGCAATGGTGTCAGCGTTTGGAGGCTaGTTATGGGGTGGATCCCTGGGTATGGCAGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LPVYAMVSAFGG*LWGGSLGMAVS Trigger: AGAAACTGCCATACCCAGGGATCCACCCCATAATCAGCCTCCAAACGCTGACACCATTGCATACACTGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAAGAGAAAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCCAGTGTATGCACATGGCAACAGCCCCTaGATCACTGTGGGTGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HKRKLYQGPFSKILPVYAHGNSP*ITVGAG Trigger: CCCAGCACCCACAGTGATCAAGGGGCTGTTGCCATG...TGCATACACTGGCAAGATTTTGCTGAAAGGACCCTGATATAGCTTTCTCTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTCATCCATCTCTACCCACCCTCCCTTCCACAGCACTGGGATTATGGGCACAGTCTTCACTTCTGCTaGTTCATCCATCTCTACCCA | + |
|
Preference number: 3 (lower is better) Translates to: LFIHLYPPSLPQHWDYGHSLHFC*FIHLYP Trigger: TGGGTAGAGATGGATGAACAAGCAGAAGTGAAGACT...GTGCCCATAATCCCAGTGCTGTGGAAGGGAGGGTGGGTAGAGATGGATGAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCCTTGACAAGGACTTCTaGCCTGGTGACAGATTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: STYRVADPFSSLATFSSSLDKDF*PGDRFG Trigger: GCCAAATCTGTCACCAGGCAAGAAGTCCTTGTCAAG...GGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAGCAGCTACCAGGAGAGAATGAGGACGTTGGAGAGCCATGTCAAGTTAATGAAGTTCAGAACCATTTaGGGGAGTTGGAAGGGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: YSSYQERMRTLESHVKLMKFRTI*GSWKGA Trigger: CGCCCCCTTCCAACTCCCCAAAATGGTTCTGAACTT...CATTAACTTGACATGGCTCTCCAACGTCCTCATTCTCTCCTGGTAGCTGCTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR TCA 72 bp | TCAGGGTATGTAAAACCTTCAAAGACCTGTCCCTACTaGCAGCCAGGCCCCACCTCAGAAATGCTCTATAGC | + |
|
Preference number: 3 (lower is better) Translates to: SGYVKPSKTCPY*QPGPTSEMLYS Trigger: GCTATAGAGCATTTCTGAGGTGGGGCCTGGCTGTCAGTAGGGACAGGTCTTTGAAGGTTTTACATACCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR TCA 72 bp | ATAAAGTTTGCACGACCAATGGGCCTCTCTTGCCACTaGTGGCCGACTTGGCCATCTTCTGCTACATATGCA | + |
|
Preference number: 3 (lower is better) Translates to: IKFARPMGLSCH*WPTWPSSATYA Trigger: TGCATATGTAGCAGAAGATGGCCAAGTCGGCCATCAGTGGCAAGAGAGGCCCATTGGTCGTGCAAACTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTATGCAATGGTGTCAGCGTTTGGAGGCTGATTATGGGGTGGATCCCTGGGTACACACACTTCCCATaGTGTGCAGGTGAATTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SVCNGVSVWRLIMGWIPGYTHFP*CAGEFV Trigger: TACAAATTCACCTGCACACAATGGGAAGTGTGTGTA...CCCAGGGATCCACCCCATAATCAGCCTCCAAACGCTGACACCATTGCATACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCCTCTCTTGCAGTCTTCACTTCTGCTaGTTCATCCATCTCTACCCA | + |
|
Preference number: 3 (lower is better) Translates to: HSPVLRQIKFARPMGLSCSLHFC*FIHLYP Trigger: TGGGTAGAGATGGATGAACAAGCAGAAGTGAAGACT...GCAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR GCA 72 bp | CTCAGTTTCAGAGGGACTTCTGTTTGTCACAGTTCCTaGAGCAACTTGACAAGGACTTCTTGCCTGGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LSFRGTSVCHSS*SNLTRTSCLVT Trigger: TGTCACCAGGCAAGAAGTCCTTGTCAAGTTGCTGCAGGAACTGTGACAAACAGAAGTCCCTCTGAAACTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CCA 72 bp | GTCACTTGGCACTCACTCGGCAAAAGCCTTTTTGACTaGTACTCTCCAACAATGATCTCTGCCTGTAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: VTWHSLGKSLFD*YSPTMISACRY Trigger: GTACCTACAGGCAGAGATCATTGTTGGAGAGTACCAGTCAAAAAGGCTTTTGCCGAGTGAGTGCCAAGTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CCA 72 bp | AGGGTCCTTTCAGCAAAATCTTGCCAGTGTATGCAATaGTGTCAGCGTTTGGAGGCTGATTATGGGGTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: RVLSAKSCQCMQ*CQRLEADYGVD Trigger: ATCCACCCCATAATCAGCCTCCAAACGCTGACACCATTGCATACACTGGCAAGATTTTGCTGAAAGGACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGGGTATGTAAAACCTTCAAAGACCTGTCCCTACTGACAGCCAGGCCCCACTACACACACTTCCCATaGTGTGCAGGTGAATTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: FRVCKTFKDLSLLTARPHYTHFP*CAGEFV Trigger: TACAAATTCACCTGCACACAATGGGAAGTGTGTGTA...GTGGGGCCTGGCTGTCAGTAGGGACAGGTCTTTGAAGGTTTTACATACCCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCAATGGGCCTCTCTTGCCACTGATGGCCGACTTGGCCATCTTCTGCTACATTGGTCTTCGTTCTTCTaGAGTTTCATGTGTTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: DQWASLATDGRLGHLLLHWSSFF*SFMCFT Trigger: TGTAAAACACATGAAACTCAAGAAGAACGAAGACCA...ATGTAGCAGAAGATGGCCAAGTCGGCCATCAGTGGCAAGAGAGGCCCATTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | AATAGTAACTGCACCTGGGCCCAGCTTTCTAGGGGGAAAGTACATTATCTCATTAGTTCCTGCAGCAACTaGACAAGGACTTCTTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: NSNCTWAQLSRGKVHYLISSCSN*TRTSCL Trigger: CAGGCAAGAAGTCCTTGTCAAGTTGCTGCAGGAACT...AATGAGATAATGTACTTTCCCCCTAGAAAGCTGGGCCCAGGTGCAGTTACTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR-3UTR CAA 90 bp | CCATCCTTTCGTCTCAGCTGCAAACTTTGTTACTCCTTCCATGGGTGTTTTGTTCATCCACTTCTGTGTTaGCTAGGCCCTGACATAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PSFRLSCKLCYSFHGCFVHPLLC*LGPDIV Trigger: GACTATGTCAGGGCCTAGCAAACACAGAAGTGGATG...AACAAAACACCCATGGAAGGAGTAACAAAGTTTGCAGCTGAGACGAAAGGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR TCA 72 bp | GACAGGCACTGGAGTCATTTCTTCATCCGTGTCACTTaGTTCACTTGCTGGTTCCAGTTTCCCATCTGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: DRHWSHFFIRVT*FTCWFQFPICS Trigger: ACTACAGATGGGAAACTGGAACCAGCAAGTGAATCAAGTGACACGGATGAAGAAATGACTCCAGTGCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143972.2 |
||
| 3UTR TCA 72 bp | GTAGAACATGAAGGTCTCAGGTATTTCAATGAGGGCTaGCAGGCACTGGAGTCATTTCTTCATCCGTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VEHEGLRYFNEG*QALESFLHPCH Trigger: GTGACACGGATGAAGAAATGACTCCAGTGCCTGTCAGCCCTCATTGAAATACCTGAGACCTTCATGTTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143972.2 |
||
| 3UTR GCA 72 bp | TGTCACAGTTCCTGCAGCAACTTGACAAGGACTTCTTaGCTGGTGACAGATTTGGCTAGATTCAGGGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: CHSSCSNLTRTS*LVTDLARFRVC Trigger: ACATACCCTGAATCTAGCCAAATCTGTCACCAGGCAAGAAGTCCTTGTCAAGTTGCTGCAGGAACTGTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR GCA 72 bp | ATATCAGGGTCCTTTCAGCAAAATCTTGCCAGTGTATaGAATGGTGTCAGCGTTTGGAGGCTGATTATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ISGSFQQNLASV*NGVSVWRLIMG Trigger: CCCCATAATCAGCCTCCAAACGCTGACACCATTGCATACACTGGCAAGATTTTGCTGAAAGGACCCTGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR GCA 72 bp | AAAAATACAAAGAAGCACATCCACGCAAGGTGTGTCTaGTTTCTTAGGGTCGCCTCCAGTGTGTTTACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KNTKKHIHARCV*FLRVASSVFTG Trigger: CCCTGTAAACACACTGGAGGCGACCCTAAGAAAGCAGACACACCTTGCGTGGATGTGCTTCTTTGTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR CCA 72 bp | TTATGGGGTGGATCCCTGGGTATGGCAGTTTCTAGATaGTCCATCCTTTCGTCTCAGCTGCAAACTTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LWGGSLGMAVSR*SILSSQLQTLL Trigger: TAACAAAGTTTGCAGCTGAGACGAAAGGATGGACCATCTAGAAACTGCCATACCCAGGGATCCACCCCATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGAGTGGTCTTCGTTCTTCTaGAGTTTCATGTGTTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: GLQIPLAPWLLSLAPPLEWSSFF*SFMCFT Trigger: TGTAAAACACATGAAACTCAAGAAGAACGAAGACCA...CTCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | TATGATGTAGGCCATGCTGTGATACAGACAGAGAAGTCTCATCAGAACTGCACTCTTCCCTGCCTGTCTTaGATGCTGTTCTGTAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: YDVGHAVIQTEKSHQNCTLPCLS*MLFCNS Trigger: TGAGTTACAGAACAGCATCAAAGACAGGCAGGGAAG...AGTGCAGTTCTGATGAGACTTCTCTGTCTGTATCACAGCATGGCCTACATCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143972.2 |
||
| 3UTR TCA 72 bp | CACCGCCACAGTTCTTTAGATAGTCTCCATGGTCCCTaGATAGTCCCAACTGTTCAAAAGGCCAAACTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: HRHSSLDSLHGP*IVPTVQKAKLS Trigger: AGAAAGTTTGGCCTTTTGAACAGTTGGGACTATTCAGGGACCATGGAGACTATCTAAAGAACTGTGGCGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR-3UTR CAA 90 bp | TATGATGTAGGCCATGCTGTGATACAGACAGAGAAGTCTCATCAGAACTGCACTTGTCACTTGATTCACTaGCTGGTTCCAGTTTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: YDVGHAVIQTEKSHQNCTCHLIH*LVPVSH Trigger: ATGGGAAACTGGAACCAGCAAGTGAATCAAGTGACA...AGTGCAGTTCTGATGAGACTTCTCTGTCTGTATCACAGCATGGCCTACATCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143972.2 |
||
| 3UTR GCA 72 bp | TGGCAGTTTCTAGATGGTCCATCCTTTCGTCTCAGCTaGAAACTTTGTTACTCCTTCCATGGGTGTTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: WQFLDGPSFRLS*KLCYSFHGCFV Trigger: AACAAAACACCCATGGAAGGAGTAACAAAGTTTGCAGCTGAGACGAAAGGATGGACCATCTAGAAACTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR GCA 72 bp | ATCTGGGTCTCAGAGAAAACAATATGGAGTAGGGTTTaGTTGCCCGTGAAATGCAAACAGTGCAGCAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: IWVSEKTIWSRV*LPVKCKQCSKR Trigger: TCTTTTGCTGCACTGTTTGCATTTCACGGGCAAGCAAACCCTACTCCATATTGTTTTCTCTGAGACCCAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR CCA 72 bp | ATTTCAGGCAAGATCTGGGTCTCAGAGAAAACAATATaGAGTAGGGTTTGCTTGCCCGTGAAATGCAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: ISGKIWVSEKTI*SRVCLPVKCKQ Trigger: CTGTTTGCATTTCACGGGCAAGCAAACCCTACTCCATATTGTTTTCTCTGAGACCCAGATCTTGCCTGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR CCA 72 bp | GAACAGTTACAGAACGGAAAGATTTCAGGCAAGATCTaGGTCTCAGAGAAAACAATATGGAGTAGGGTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: EQLQNGKISGKI*VSEKTIWSRVC Trigger: GCAAACCCTACTCCATATTGTTTTCTCTGAGACCCAGATCTTGCCTGAAATCTTTCCGTTCTGTAACTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR CCA 72 bp | TGGTGGGCCAGCTCAACTGGATTAACTCTTATGTCTTaGGTAACTTGGCCAGGAGTAAATAACATTCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: WWASSTGLTLMS*VTWPGVNNILL Trigger: CAAAAGAATGTTATTTACTCCTGGCCAAGTTACCCAAGACATAAGAGTTAATCCAGTTGAGCTGGCCCACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR TCA 72 bp | AGGTACTCAGGAGTCACCGAAGTGTGCTTCCTGAACTaGTATTTGAAAGATGGATTTGTTACTTTTGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RYSGVTEVCFLN*YLKDGFVTFVL Trigger: CAGCACAAAAGTAACAAATCCATCTTTCAAATATCAGTTCAGGAAGCACACTTCGGTGACTCCTGAGTACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CCA 72 bp | TTCCCAATTCTAAGAAGGGGCAAAGTGGCCACACTTTaGTCTTCGTTCTTCTTGAGTTTCATGTGTTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: FPILRRGKVATL*SSFFLSFMCFT Trigger: TGTAAAACACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGCCACTTTGCCCCTTCTTAGAATTGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR TCA 72 bp | TGTATCTTCTATCTTGGGTATTCTAAGTTTCTGGGCTaGTATCCACTTATCAGTGAGTACATATCGTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CIFYLGYSKFLG*YPLISEYISCE Trigger: CTCACACGATATGTACTCACTGATAAGTGGATATCAGCCCAGAAACTTAGAATACCCAAGATAGAAGATACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR TCA 72 bp | ACAATTTTATTAGACTTTAATCAACAACATGGCAGGTaGGCTGGAAATTACAGCAGCTACCAGGAGAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: TILLDFNQQHGR*AGNYSSYQERM Trigger: CATTCTCTCCTGGTAGCTGCTGTAATTTCCAGCTCACCTGCCATGTTGTTGATTAAAGTCTAATAAAATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR CCA 72 bp | GGTTACTATTTAGACTCTAAGCTAAGTTCCCAGTACTaGGTATTTGGCTATAATGAAAAGCAGACTAACACA | + |
|
Preference number: 3 (lower is better) Translates to: GYYLDSKLSSQY*VFGYNEKQTNT Trigger: TGTGTTAGTCTGCTTTTCATTATAGCCAAATACCCAGTACTGGGAACTTAGCTTAGAGTCTAAATAGTAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CCA 72 bp | CACCGAAGTGTGCTTCCTGAACTGATATTTGAAAGATaGATTTGTTACTTTTGTGCTGCTGTAATCCAAATT | + |
|
Preference number: 3 (lower is better) Translates to: HRSVLPELIFER*ICYFCAAVIQI Trigger: AATTTGGATTACAGCAGCACAAAAGTAACAAATCCATCTTTCAAATATCAGTTCAGGAAGCACACTTCGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CCA 72 bp | AGCTCAACTGGATTAACTCTTATGTCTTGGGTAACTTaGCCAGGAGTAAATAACATTCTTTTGACCAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSTGLTLMSWVT*PGVNNILLTKK Trigger: CTTTTTGGTCAAAAGAATGTTATTTACTCCTGGCCAAGTTACCCAAGACATAAGAGTTAATCCAGTTGAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR CAA 72 bp | CACGGCTGTCAGGTCGGATGGGGCACAGCTCCTTCCTaGCCAAGCTCTCATTGCTTGCAGCCCAGGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HGCQVGWGTAPS*PSSHCLQPREV Trigger: AACCTCCCTGGGCTGCAAGCAATGAGAGCTTGGCAAGGAAGGAGCTGTGCCCCATCCGACCTGACAGCCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR CAA 72 bp | CGGATGGGGCACAGCTCCTTCCTTGCCAAGCTCTCATaGCTTGCAGCCCAGGGAGGTTTTGTAGAGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RMGHSSFLAKLS*LAAQGGFVETS Trigger: GGAAGTCTCTACAAAACCTCCCTGGGCTGCAAGCAATGAGAGCTTGGCAAGGAAGGAGCTGTGCCCCATCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| CDS-3UTR CCA 90 bp | ACGTTGGAGAGCCATGTCAAGTTAATGTTTAGCAATGGGTGTCAGCCACAAGTGACGGCCTCCCGGGAATaGTGCCGCCTTCCCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLESHVKLMFSNGCQPQVTASRE*CRLPCL Trigger: CAGGCAGGGAAGGCGGCACCATTCCCGGGAGGCCGT...CACTTGTGGCTGACACCCATTGCTAAACATTAACTTGACATGGCTCTCCAACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR CAA 72 bp | GAGGCAGATAAAGTTTGCACGACCAATGGGCCTCTCTaGCCACTGATGGCCGACTTGGCCATCTTCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: EADKVCTTNGPL*PLMADLAIFCY Trigger: GTAGCAGAAGATGGCCAAGTCGGCCATCAGTGGCAAGAGAGGCCCATTGGTCGTGCAAACTTTATCTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CAA 72 bp | CAAGAGGACTCTAGGGCAACATATAGACCTTCCTGTTaGCTGGCTTCCTATCTTGCCTGCCCCATCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QEDSRATYRPSC*LASYLACPIHL Trigger: GAGGTGGATGGGGCAGGCAAGATAGGAAGCCAGCAAACAGGAAGGTCTATATGTTGCCCTAGAGTCCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| CDS-3UTR GCA 90 bp | GGTGTCAGCCACAAGTGGAACAAGCAGCTGTATGTCCTAGGGCTTCAGAGAAAATGGTGCCGCCTTCCCTaGCTGTCTTTGATGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GVSHKWNKQLYVLGLQRKWCRLP*LSLMLF Trigger: GAACAGCATCAAAGACAGGCAGGGAAGGCGGCACCA...TTTTCTCTGAAGCCCTAGGACATACAGCTGCTTGTTCCACTTGTGGCTGACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| CDS-3UTR GCA 90 bp | GTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGCCTCCCGGGAATGGTaGCGCCTTCCCTGCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSYCCSTYRVADPFSSLASREW*RLPCLS Trigger: AGACAGGCAGGGAAGGCGGCACCATTCCCGGGAGGC...CAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGAACTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR CAA 72 bp | GCAAAATCTTGCCAGTGTATGCAATGGTGTCAGCGTTaGGAGGCTGATTATGGGGTGGATCCCTGGGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: AKSCQCMQWCQR*EADYGVDPWVW Trigger: CCATACCCAGGGATCCACCCCATAATCAGCCTCCAAACGCTGACACCATTGCATACACTGGCAAGATTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CAA 72 bp | TGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTaGGCTACTTTCTCTAGCTCCTCCATTGGAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSTYRVADPFSS*ATFSSSSIGGP Trigger: AGGGCCTCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| CDS-3UTR TCA 90 bp | AAAAAGTGTAAGGAGTATGAGCAGTGGGTGAGTCTCACGTCCAACTGCTCTACCGCTCCAGCTCACTGCTaGACCGATCCAAGTACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KKCKEYEQWVSLTSNCSTAPAHC*TDPSTF Trigger: AAAGGTACTTGGATCGGTTCAGCAGTGAGCTGGAGC...GGTAGAGCAGTTGGACGTGAGACTCACCCACTGCTCATACTCCTTACACTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| CDS-3UTR TCA 90 bp | TTAACTGGCTCTCTCCCATGTGCTGATGTTCAGAGCCAAGAGGACTCTAGGGCATTCCCTGCCTGTCTTTaGTGCTGTTCTGTAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTGSLPCADVQSQEDSRAFPACL*CCSVTQ Trigger: TTGAGTTACAGAACAGCATCAAAGACAGGCAGGGAA...TGCCCTAGAGTCCTCTTGGCTCTGAACATCAGCACATGGGAGAGAGCCAGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| CDS-3UTR GCA 90 bp | GCAGTCTTCACTTCTGCTTGTTCATCCATCTCTACCCACCCTCCCTTCCACAGCGCGCTTCTTAGGAACTaGATCATCAGCACAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVFTSACSSISTHPPFHSALLRN*IISTKF Trigger: AAACTTTGTGCTGATGATGCAGTTCCTAAGAAGCGC...GCTGTGGAAGGGAGGGTGGGTAGAGATGGATGAACAAGCAGAAGTGAAGACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| CDS-3UTR CCA 90 bp | TACAGCAGCTACCAGGAGAGAATGAGGACGTTGGAGAGCCATGTCAAGTTAATGAGGGCTGACAGGCACTaGAGTCATTTCTTCATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: YSSYQERMRTLESHVKLMRADRH*SHFFIR Trigger: ACGGATGAAGAAATGACTCCAGTGCCTGTCAGCCCT...CATTAACTTGACATGGCTCTCCAACGTCCTCATTCTCTCCTGGTAGCTGCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
||
| 3UTR CAA 72 bp | AGAGGGACTTCTGTTTGTCACAGTTCCTGCAGCAACTaGACAAGGACTTCTTGCCTGGTGACAGATTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGTSVCHSSCSN*TRTSCLVTDLA Trigger: AGCCAAATCTGTCACCAGGCAAGAAGTCCTTGTCAAGTTGCTGCAGGAACTGTGACAAACAGAAGTCCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CAA 72 bp | CAACATATAGACCTTCCTGTTTGCTGGCTTCCTATCTaGCCTGCCCCATCCACCTCCGATATATGTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: QHIDLPVCWLPI*PAPSTSDICFY Trigger: ATAGAAACATATATCGGAGGTGGATGGGGCAGGCAAGATAGGAAGCCAGCAAACAGGAAGGTCTATATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CAA 72 bp | TCAGCTGCAAACTTTGTTACTCCTTCCATGGGTGTTTaGTTCCCAATTCTAAGAAGGGGCAAAGTGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SAANFVTPSMGV*FPILRRGKVAT Trigger: TGTGGCCACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTAACAAAGTTTGCAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CAA 72 bp | AAGTATATGCTGACTCAGTTTCAGAGGGACTTCTGTTaGTCACAGTTCCTGCAGCAACTTGACAAGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KYMLTQFQRDFC*SQFLQQLDKDF Trigger: GAAGTCCTTGTCAAGTTGCTGCAGGAACTGTGACAAACAGAAGTCCCTCTGAAACTGAGTCAGCATATACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CAA 72 bp | AGCAACTTGACAAGGACTTCTTGCCTGGTGACAGATTaGGCTAGATTCAGGGTATGTAAAACCTTCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SNLTRTSCLVTD*ARFRVCKTFKD Trigger: GTCTTTGAAGGTTTTACATACCCTGAATCTAGCCAAATCTGTCACCAGGCAAGAAGTCCTTGTCAAGTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
||
| 3UTR CAA 72 bp | GTTCCCAATTCTAAGAAGGGGCAAAGTGGCCACACTTaGGTCTTCGTTCTTCTTGAGTTTCATGTGTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VPNSKKGQSGHT*VFVLLEFHVFY Trigger: GTAAAACACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGCCACTTTGCCCCTTCTTAGAATTGGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| 3UTR CAA 72 bp | TGGGTCTCAGAGAAAACAATATGGAGTAGGGTTTGCTaGCCCGTGAAATGCAAACAGTGCAGCAAAAGAATA | + |
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Preference number: 4 (lower is better) Translates to: WVSEKTIWSRVC*PVKCKQCSKRI Trigger: TATTCTTTTGCTGCACTGTTTGCATTTCACGGGCAAGCAAACCCTACTCCATATTGTTTTCTCTGAGACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
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| 3UTR CAA 72 bp | AGGGGCAAAGTGGCCACACTTTGGTCTTCGTTCTTCTaGAGTTTCATGTGTTTTACAAATTGTATCTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: RGKVATLWSSFF*SFMCFTNCIFY Trigger: ATAGAAGATACAATTTGTAAAACACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGCCACTTTGCCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026681.7 ENSMUST00000143972.2 |
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| CDS-3UTR CAA 90 bp | CTACCCACCCCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGTGTCACTTGATTCACTaGCTGGTTCCAGTTTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: LPTPTPTSWPWHSPVLRQCHLIH*LVPVSH Trigger: ATGGGAAACTGGAACCAGCAAGTGAATCAAGTGACA...CTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGGGTGGGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
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| CDS-3UTR CAA 90 bp | TGGAGTAGGGTTTGCTTGCCCGTGAAATGCAAACAGTGCAGCAAAAGAATACAGCTTCCCTGCCTGTCTTaGATGCTGTTCTGTAACTCA | + |
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Preference number: 5 (lower is better) Translates to: WSRVCLPVKCKQCSKRIQLPCLS*MLFCNS Trigger: TGAGTTACAGAACAGCATCAAAGACAGGCAGGGAAG...CTGTATTCTTTTGCTGCACTGTTTGCATTTCACGGGCAAGCAAACCCTACTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
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| CDS-3UTR CAA 90 bp | GGTGTCAGCCACAAGTGGAACAAGCAGCTGTATGTCCTAGGGCTTCAGAGAAAAATGACTGTGAAACCATaGAAGTTTGTCACCAATAAG | + |
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Preference number: 5 (lower is better) Translates to: GVSHKWNKQLYVLGLQRKMTVKP*KFVTNK Trigger: CTTATTGGTGACAAACTTCAATGGTTTCACAGTCAT...TTTTCTCTGAAGCCCTAGGACATACAGCTGCTTGTTCCACTTGTGGCTGACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026681.7 |
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