Pregenerated sensors for TM9SF4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068040Ensembl transcript IDs: ENSMUST00000089027.3
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGTTTGCTGGGCTAGGCCAGGGCGGAGGAGCTAGGCCAGGCCCATaGTCCTCTTCCAACCTGGGGAGACTGGCTTCTTGCCTATTCCTA | + |
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Preference number: 1 (lower is better) Translates to: GFAGLGQGGGARPGP*SSSNLGRLASCLFL Trigger: TAGGAATAGGCAAGAAGCCAGTCTCCCCAGGTTGGAAGAGGATCATGGGCCTGGCCTAGCTCCTCCGCCCTGGCCTAGCCCAGCAAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR TCA 90 bp | GCAGGGTGTGTTCCTAGCACAAGCAGCATCCTGAGCTTTGTCTCCTaGCAGGCTCCCAAAGGACTGGAGCAAGGGCGAGTGGCTGCTACT | + |
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Preference number: 1 (lower is better) Translates to: AGCVPSTSSILSFVS*QAPKGLEQGRVAAT Trigger: AGTAGCAGCCACTCGCCCTTGCTCCAGTCCTTTGGGAGCCTGTCAGGAGACAAAGCTCAGGATGCTGCTTGTGCTAGGAACACACCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CCA 90 bp | CTGGGGCCAAGGGCTGTGAGGAGAGAGAGCGAGACTTCCTCTCCCTaGCCGCCTCAAGGAAGAGATCTGAAGACTCCAGACCTGAAAGTA | + |
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Preference number: 1 (lower is better) Translates to: LGPRAVRRESETSSP*PPQGRDLKTPDLKV Trigger: TACTTTCAGGTCTGGAGTCTTCAGATCTCTTCCTTGAGGCGGCCAGGGAGAGGAAGTCTCGCTCTCTCTCCTCACAGCCCTTGGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR TCA 90 bp | GGTTTGGCTAAAGGACCCAAGAATAAATGCTGGGGCCAAGGGCTGTaGGGAGAGAGAGCGAGACTTCCTCTCCCTGGCCGCCTCAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: GLAKGPKNKCWGQGL*GERARLPLPGRLKE Trigger: TTCCTTGAGGCGGCCAGGGAGAGGAAGTCTCGCTCTCTCTCCTCACAGCCCTTGGCCCCAGCATTTATTCTTGGGTCCTTTAGCCAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR TCA 90 bp | AACTCCCAATCACTCTCCACTCTCTGGGCTCCCATTTCTCCAGCCTaGTTCCTGGTGGATGCCACTCAGTGCTGCGAAGTCACTGCGAGG | + |
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Preference number: 1 (lower is better) Translates to: NSQSLSTLWAPISPA*FLVDATQCCEVTAR Trigger: CCTCGCAGTGACTTCGCAGCACTGAGTGGCATCCACCAGGAATCAGGCTGGAGAAATGGGAGCCCAGAGAGTGGAGAGTGATTGGGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CCA 90 bp | CACTCTCCACTCTCTGGGCTCCCATTTCTCCAGCCTGATTCCTGGTaGATGCCACTCAGTGCTGCGAAGTCACTGCGAGGCAGATTGAGA | + |
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Preference number: 1 (lower is better) Translates to: HSPLSGLPFLQPDSW*MPLSAAKSLRGRLR Trigger: TCTCAATCTGCCTCGCAGTGACTTCGCAGCACTGAGTGGCATCCACCAGGAATCAGGCTGGAGAAATGGGAGCCCAGAGAGTGGAGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CCA 90 bp | AATCACTCTCCACTCTCTGGGCTCCCATTTCTCCAGCCTGATTCCTaGTGGATGCCACTCAGTGCTGCGAAGTCACTGCGAGGCAGATTG | + |
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Preference number: 1 (lower is better) Translates to: NHSPLSGLPFLQPDS*WMPLSAAKSLRGRL Trigger: CAATCTGCCTCGCAGTGACTTCGCAGCACTGAGTGGCATCCACCAGGAATCAGGCTGGAGAAATGGGAGCCCAGAGAGTGGAGAGTGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR TCA 90 bp | AACACCTGGCCCTGGCCCAGGGCTTCTTGGCACGAGAACAGTCACTaGGGTCTCACTTCTTCCTTGGTGTTCAGTAAACTCTGGCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: NTWPWPRASWHENSH*GLTSSLVFSKLWLL Trigger: AAGCAGCCAGAGTTTACTGAACACCAAGGAAGAAGTGAGACCTCAGTGACTGTTCTCGTGCCAAGAAGCCCTGGGCCAGGGCCAGGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR GCA 90 bp | GAGTGGCTGCTACTGACCCCTACACCCAAGGTGAGTTTGGTCTCTTaGTACTTAAGAGCAAACTCTGTGACTCGCCCAGGGTTTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: EWLLLTPTPKVSLVS*YLRANSVTRPGFAG Trigger: CCCAGCAAACCCTGGGCGAGTCACAGAGTTTGCTCTTAAGTAGCAAGAGACCAAACTCACCTTGGGTGTAGGGGTCAGTAGCAGCCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CCA 90 bp | GAAATGGAAGGGTTATCTACAGGCCCTCCTGTCCCCCATGCAGCCTaGGGGTCTAGGAACACTGTGCCAGGAGTTACATTCCAAATGAGC | + |
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Preference number: 1 (lower is better) Translates to: EMEGLSTGPPVPHAA*GSRNTVPGVTFQMS Trigger: GCTCATTTGGAATGTAACTCCTGGCACAGTGTTCCTAGACCCCCAGGCTGCATGGGGGACAGGAGGGCCTGTAGATAACCCTTCCATTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CCA 90 bp | GGGTGTTCCCAAAAGAACTTGCATGGGAGGAAGAGGGAATGGGTTTaGCTAAAGGACCCAAGAATAAATGCTGGGGCCAAGGGCTGTGAG | + |
|
Preference number: 1 (lower is better) Translates to: GCSQKNLHGRKREWV*LKDPRINAGAKGCE Trigger: CTCACAGCCCTTGGCCCCAGCATTTATTCTTGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTCCCATGCAAGTTCTTTTGGGAACACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CCA 90 bp | CTCTTCCAACCTGGGGAGACTGGCTTCTTGCCTATTCCTAGGAACTaGGAAAGGAGCAACTCAACTTACCTTCCATTTTTCTTCTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: LFQPGETGFLPIPRN*ERSNSTYLPFFFSE Trigger: CTCTGAGAAGAAAAATGGAAGGTAAGTTGAGTTGCTCCTTTCCCAGTTCCTAGGAATAGGCAAGAAGCCAGTCTCCCCAGGTTGGAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR CCA 90 bp | CATACACACATGGGCACTTGGCTCTGGAAACACCTGGCCCTGGCCCAGGGCTTCAGTCCCCACGCAGGGTaGCTTCCTGTCGAGGATCCA | + |
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Preference number: 2 (lower is better) Translates to: HTHMGTWLWKHLALAQGFSPHAG*LPVEDP Trigger: TGGATCCTCGACAGGAAGCCACCCTGCGTGGGGACT...GAAGCCCTGGGCCAGGGCCAGGTGTTTCCAGAGCCAAGTGCCCATGTGTGTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTGCTGTCCCAGGGAACCAGGACATGTCCTTGTAGTGACCAAGTGTTCCCAGGGGCGTGGTTGGCACTaGGAAGCTTGGAGCCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: SCCPREPGHVLVVTKCSQGRGWH*EAWSPH Trigger: GTGAGGGCTCCAAGCTTCTCAGTGCCAACCACGCCC...CTGGGAACACTTGGTCACTACAAGGACATGTCCTGGTTCCCTGGGACAGCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR CCA 90 bp | GCTTTAGCCACCTCTTCCCATACACACATGGGCACTTGGCTCTGGAAACACCTGAATGGGAGGAGGGGCTaGCAGGGCGTGGTTGGCACT | + |
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Preference number: 2 (lower is better) Translates to: ALATSSHTHMGTWLWKHLNGRRG*QGVVGT Trigger: AGTGCCAACCACGCCCTGCCAGCCCCTCCTCCCATT...CAGGTGTTTCCAGAGCCAAGTGCCCATGTGTGTATGGGAAGAGGTGGCTAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CAA 90 bp | ATGGGCACTTGGCTCTGGAAACACCTGGCCCTGGCCCAGGGCTTCTaGGCACGAGAACAGTCACTGAGGTCTCACTTCTTCCTTGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: MGTWLWKHLALAQGF*AREQSLRSHFFLGV Trigger: AACACCAAGGAAGAAGTGAGACCTCAGTGACTGTTCTCGTGCCAAGAAGCCCTGGGCCAGGGCCAGGTGTTTCCAGAGCCAAGTGCCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR GCA 90 bp | ACTCCCAATCACTCTCCACTCTCTGGGCTCCCATTTCTCCAGCCTGATTCCTGGTTGAGGAGGGGATCCTaGTGTCCCAGGGAACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: TPNHSPLSGLPFLQPDSWLRRGS*CPREPG Trigger: TCCTGGTTCCCTGGGACAGCAGGATCCCCTCCTCAA...CCAGGAATCAGGCTGGAGAAATGGGAGCCCAGAGAGTGGAGAGTGATTGGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CAA 90 bp | AGCAAGGGCGAGTGGCTGCTACTGACCCCTACACCCAAGGTGAGTTaGGTCTCTTGCTACTTAAGAGCAAACTCTGTGACTCGCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SKGEWLLLTPTPKVS*VSCYLRANSVTRPG Trigger: CCCTGGGCGAGTCACAGAGTTTGCTCTTAAGTAGCAAGAGACCAAACTCACCTTGGGTGTAGGGGTCAGTAGCAGCCACTCGCCCTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR TCA 90 bp | CATACACACATGGGCACTTGGCTCTGGAAACACCTGGCCCTGGCCCAGGGCTTCAGCCGATGGGGACAGTaGCCAAAACCCTACATTTAT | + |
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Preference number: 2 (lower is better) Translates to: HTHMGTWLWKHLALAQGFSRWGQ*PKPYIY Trigger: ATAAATGTAGGGTTTTGGTCACTGTCCCCATCGGCT...GAAGCCCTGGGCCAGGGCCAGGTGTTTCCAGAGCCAAGTGCCCATGTGTGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR CCA 90 bp | TCCCAAAAGAACTTGCATGGGAGGAAGAGGGAATGGGTTTGGCTAAAGGACCCAGGAAACACCTGGCCCTaGCCCAGGGCTTCTTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: SQKNLHGRKREWVWLKDPGNTWP*PRASWH Trigger: GTGCCAAGAAGCCCTGGGCCAGGGCCAGGTGTTTCC...TGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTCCCATGCAAGTTCTTTTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CAA 90 bp | CGAGTGGCTGCTACTGACCCCTACACCCAAGGTGAGTTTGGTCTCTaGCTACTTAAGAGCAAACTCTGTGACTCGCCCAGGGTTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: RVAATDPYTQGEFGL*LLKSKLCDSPRVCW Trigger: CCAGCAAACCCTGGGCGAGTCACAGAGTTTGCTCTTAAGTAGCAAGAGACCAAACTCACCTTGGGTGTAGGGGTCAGTAGCAGCCACTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR GCA 90 bp | CATACACACATGGGCACTTGGCTCTGGAAACACCTGGCCCTGGCCCAGGGCTTCGGTCTAGGAACACTGTaGCAGGAGTTACATTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: HTHMGTWLWKHLALAQGFGLGTL*QELHSK Trigger: TTTGGAATGTAACTCCTGGCACAGTGTTCCTAGACC...GAAGCCCTGGGCCAGGGCCAGGTGTTTCCAGAGCCAAGTGCCCATGTGTGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGAAGAGGGAATGGGTTTGGCTAAAGGACCCAAGAATAAATGCTGGGGCCAAGTCCCCCATGCAGCCTaGGGGTCTAGGAACACTGTG | + |
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Preference number: 2 (lower is better) Translates to: EEEGMGLAKGPKNKCWGQVPHAA*GSRNTV Trigger: CACAGTGTTCCTAGACCCCCAGGCTGCATGGGGGAC...TTGGCCCCAGCATTTATTCTTGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR GCA 90 bp | CTTCTTCCTTGGTGTTCAGTAAACTCTGGCTGCTTTGAGGAGGGGATCCTGCTGTTTATTTTGTGTGCCTaGAGTCCCCACGCAGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LLPWCSVNSGCFEEGILLFILCA*SPHAGW Trigger: CCACCCTGCGTGGGGACTGCAGGCACACAAAATAAA...CAGCAGGATCCCCTCCTCAAAGCAGCCAGAGTTTACTGAACACCAAGGAAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR GCA 90 bp | TCCCAAAAGAACTTGCATGGGAGGAAGAGGGAATGGGTTTGGCTAAAGGACCCACTTTACAAAGTGCGGTaGCCCAGAGGGAAAGACAGG | + |
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Preference number: 2 (lower is better) Translates to: SQKNLHGRKREWVWLKDPLYKVR*PRGKDR Trigger: CCTGTCTTTCCCTCTGGGGCACCGCACTTTGTAAAG...TGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTCCCATGCAAGTTCTTTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR GCA 90 bp | TCCCAAAAGAACTTGCATGGGAGGAAGAGGGAATGGGTTTGGCTAAAGGACCCATCACCCTTTACAAAGTaGGGTGCCCCAGAGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SQKNLHGRKREWVWLKDPSPFTK*GAPEGK Trigger: CTTTCCCTCTGGGGCACCGCACTTTGTAAAGGGTGA...TGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTCCCATGCAAGTTCTTTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGTGGATGCCACTCAGTGCTGCGAAGTCACTGCGAGGCAGATTGAGAGGTAAGAGGGAATGGGTTTaGCTAAAGGACCCAAGAATA | + |
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Preference number: 2 (lower is better) Translates to: SWWMPLSAAKSLRGRLRGKREWV*LKDPRI Trigger: TATTCTTGGGTCCTTTAGCCAAACCCATTCCCTCTT...ACCTCTCAATCTGCCTCGCAGTGACTTCGCAGCACTGAGTGGCATCCACCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR TCA 90 bp | AGTGACCAAGTGTTCCCAGTTAAAACGATGACCAAAGACCTGACTGTTCGGGGCAAACCAAAAAGAACCTaGATTAACAGGTCAGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: SDQVFPVKTMTKDLTVRGKPKRT*INRSES Trigger: GCTTTCTGACCTGTTAATTCAGGTTCTTTTTGGTTT...GCCCCGAACAGTCAGGTCTTTGGTCATCGTTTTAACTGGGAACACTTGGTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR TCA 72 bp | GGGCTAGGCCAGGGCGGAGGAGCTAGGCCAGGCCCATaGTCCTCTTCCAACCTGGGGAGACTGGCTTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: GLGQGGGARPGP*SSSNLGRLASC Trigger: GCAAGAAGCCAGTCTCCCCAGGTTGGAAGAGGATCATGGGCCTGGCCTAGCTCCTCCGCCCTGGCCTAGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CCA 72 bp | GCCACCTCTTCCCATACACACATGGGCACTTGGCTCTaGAAACACCTGGCCCTGGCCCAGGGCTTCTTGGCA | + |
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Preference number: 3 (lower is better) Translates to: ATSSHTHMGTWL*KHLALAQGFLA Trigger: TGCCAAGAAGCCCTGGGCCAGGGCCAGGTGTTTCCAGAGCCAAGTGCCCATGTGTGTATGGGAAGAGGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CCA 72 bp | GCTTTAGCCACCTCTTCCCATACACACATGGGCACTTaGCTCTGGAAACACCTGGCCCTGGCCCAGGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: ALATSSHTHMGT*LWKHLALAQGF Trigger: GAAGCCCTGGGCCAGGGCCAGGTGTTTCCAGAGCCAAGTGCCCATGTGTGTATGGGAAGAGGTGGCTAAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR TCA 72 bp | AAAGGACCCAAGAATAAATGCTGGGGCCAAGGGCTGTaGGGAGAGAGAGCGAGACTTCCTCTCCCTGGCCGC | + |
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Preference number: 3 (lower is better) Translates to: KGPKNKCWGQGL*GERARLPLPGR Trigger: GCGGCCAGGGAGAGGAAGTCTCGCTCTCTCTCCTCACAGCCCTTGGCCCCAGCATTTATTCTTGGGTCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CCA 72 bp | AGGGCTGTGAGGAGAGAGAGCGAGACTTCCTCTCCCTaGCCGCCTCAAGGAAGAGATCTGAAGACTCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: RAVRRESETSSP*PPQGRDLKTPD Trigger: GTCTGGAGTCTTCAGATCTCTTCCTTGAGGCGGCCAGGGAGAGGAAGTCTCGCTCTCTCTCCTCACAGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR TCA 72 bp | GTTCCTAGCACAAGCAGCATCCTGAGCTTTGTCTCCTaGCAGGCTCCCAAAGGACTGGAGCAAGGGCGAGTG | + |
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Preference number: 3 (lower is better) Translates to: VPSTSSILSFVS*QAPKGLEQGRV Trigger: CACTCGCCCTTGCTCCAGTCCTTTGGGAGCCTGTCAGGAGACAAAGCTCAGGATGCTGCTTGTGCTAGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR CAA 90 bp | GAGGAAGAGGGAATGGGTTTGGCTAAAGGACCCAAGAATAAATGCTGGGGCCAAGCTGGCAGGGCGTGGTaGGCACTGAGAAGCTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: EEEGMGLAKGPKNKCWGQAGRAW*ALRSLE Trigger: CTCCAAGCTTCTCAGTGCCAACCACGCCCTGCCAGC...TTGGCCCCAGCATTTATTCTTGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR GCA 72 bp | GGGAAGGGGTCCACCATCACCCTTTACAAAGTGCGGTaGCCCAGAGGGAAAGACAGGGAATCAATCTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: GKGSTITLYKVR*PRGKDRESILR Trigger: CCTCAAGATTGATTCCCTGTCTTTCCCTCTGGGGCACCGCACTTTGTAAAGGGTGATGGTGGACCCCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR TCA 72 bp | ACTTCTTCCTTGGTGTTCAGTAAACTCTGGCTGCTTTaGGGAGGGGATCCTGCTGTCCCAGGGAACCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: TSSLVFSKLWLL*GGDPAVPGNQD Trigger: GTCCTGGTTCCCTGGGACAGCAGGATCCCCTCCTCAAAGCAGCCAGAGTTTACTGAACACCAAGGAAGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR TCA 72 bp | CCCTGGCCCAGGGCTTCTTGGCACGAGAACAGTCACTaGGGTCTCACTTCTTCCTTGGTGTTCAGTAAACTC | + |
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Preference number: 3 (lower is better) Translates to: PWPRASWHENSH*GLTSSLVFSKL Trigger: GAGTTTACTGAACACCAAGGAAGAAGTGAGACCTCAGTGACTGTTCTCGTGCCAAGAAGCCCTGGGCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR GCA 72 bp | GTCTCACTTCTTCCTTGGTGTTCAGTAAACTCTGGCTaGTTTGAGGAGGGGATCCTGCTGTCCCAGGGAACC | + |
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Preference number: 3 (lower is better) Translates to: VSLLPWCSVNSG*FEEGILLSQGT Trigger: GGTTCCCTGGGACAGCAGGATCCCCTCCTCAAAGCAGCCAGAGTTTACTGAACACCAAGGAAGAAGTGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR GCA 72 bp | AGTAAGGGAAGGGGTCCACCATCACCCTTTACAAAGTaGGGTGCCCCAGAGGGAAAGACAGGGAATCAATCT | + |
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Preference number: 3 (lower is better) Translates to: SKGRGPPSPFTK*GAPEGKTGNQS Trigger: AGATTGATTCCCTGTCTTTCCCTCTGGGGCACCGCACTTTGTAAAGGGTGATGGTGGACCCCTTCCCTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR GCA 72 bp | CTACTGACCCCTACACCCAAGGTGAGTTTGGTCTCTTaGTACTTAAGAGCAAACTCTGTGACTCGCCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: LLTPTPKVSLVS*YLRANSVTRPG Trigger: CCCTGGGCGAGTCACAGAGTTTGCTCTTAAGTAGCAAGAGACCAAACTCACCTTGGGTGTAGGGGTCAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CCA 72 bp | GGCACGAGAACAGTCACTGAGGTCTCACTTCTTCCTTaGTGTTCAGTAAACTCTGGCTGCTTTGAGGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: GTRTVTEVSLLP*CSVNSGCFEEG Trigger: CCCCTCCTCAAAGCAGCCAGAGTTTACTGAACACCAAGGAAGAAGTGAGACCTCAGTGACTGTTCTCGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR CAA 90 bp | TCCTGGTGGATGCCACTCAGTGCTGCGAAGTCACTGCGAGGCAGATTGAGAGGTGGTGAGTTTGGTCTCTaGCTACTTAAGAGCAAACTC | + |
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Preference number: 3 (lower is better) Translates to: SWWMPLSAAKSLRGRLRGGEFGL*LLKSKL Trigger: GAGTTTGCTCTTAAGTAGCAAGAGACCAAACTCACC...ACCTCTCAATCTGCCTCGCAGTGACTTCGCAGCACTGAGTGGCATCCACCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR-3UTR CAA 90 bp | AGAGATCTGAAGACTCCAGACCTGAAAGTAAGGGAAGGGGTCCACCATCACCCTACGAGTTATTTTATTTaGTGTGCCTGCAGTCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: RDLKTPDLKVREGVHHHPTSYFI*CACSPH Trigger: GTGGGGACTGCAGGCACACAAAATAAAATAACTCGT...AGGGTGATGGTGGACCCCTTCCCTTACTTTCAGGTCTGGAGTCTTCAGATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CCA 72 bp | CAAAAGAACTTGCATGGGAGGAAGAGGGAATGGGTTTaGCTAAAGGACCCAAGAATAAATGCTGGGGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: QKNLHGRKREWV*LKDPRINAGAK Trigger: CTTGGCCCCAGCATTTATTCTTGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTCCCATGCAAGTTCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CCA 72 bp | CCTGGGGAGACTGGCTTCTTGCCTATTCCTAGGAACTaGGAAAGGAGCAACTCAACTTACCTTCCATTTTTC | + |
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Preference number: 3 (lower is better) Translates to: PGETGFLPIPRN*ERSNSTYLPFF Trigger: GAAAAATGGAAGGTAAGTTGAGTTGCTCCTTTCCCAGTTCCTAGGAATAGGCAAGAAGCCAGTCTCCCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR CCA 72 bp | TGTTCCCAAAAGAACTTGCATGGGAGGAAGAGGGAATaGGTTTGGCTAAAGGACCCAAGAATAAATGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: CSQKNLHGRKRE*VWLKDPRINAG Trigger: CCCAGCATTTATTCTTGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTCCCATGCAAGTTCTTTTGGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR TCA 72 bp | ACCACAGAAAAATGTATCCCTACAGACTGGATGAGATaGAGGAAATGGAAGGGTTATCTACAGGCCCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: TTEKCIPTDWMR*RKWKGYLQALL Trigger: CAGGAGGGCCTGTAGATAACCCTTCCATTTCCTTCATCTCATCCAGTCTGTAGGGATACATTTTTCTGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| 3UTR TCA 72 bp | CAGGTCAGAAAGCTCCTGCTGACAGCGACTCTTAGCTaGAGAAAACCAACCACAGAAAAATGTATCCCTACA | + |
|
Preference number: 3 (lower is better) Translates to: QVRKLLLTATLS*RKPTTEKCIPT Trigger: TGTAGGGATACATTTTTCTGTGGTTGGTTTTCTTCAGCTAAGAGTCGCTGTCAGCAGGAGCTTTCTGACCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| 3UTR TCA 72 bp | GGTCTAGGAACACTGTGCCAGGAGTTACATTCCAAATaGGCACGAGTTATTTTATTTTGTGTGCCTGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GLGTLCQELHSK*ARVILFCVPAV Trigger: GACTGCAGGCACACAAAATAAAATAACTCGTGCTCATTTGGAATGTAACTCCTGGCACAGTGTTCCTAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| 3UTR TCA 72 bp | AACCAACCACAGAAAAATGTATCCCTACAGACTGGATaGGATGAAGGAAATGGAAGGGTTATCTACAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: NQPQKNVSLQTG*DEGNGRVIYRP Trigger: GGGCCTGTAGATAACCCTTCCATTTCCTTCATCTCATCCAGTCTGTAGGGATACATTTTTCTGTGGTTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | TTTTGTGTGCCTGCAGTCCCCACGCAGGGTGGCTTCCTGTCGAGGATCCAGTGGAGCAGGCAGTGGTCATaGGAGCTCCCCGGCTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: FCVPAVPTQGGFLSRIQWSRQWS*ELPGWT Trigger: CGTCCAGCCGGGGAGCTCTCATGACCACTGCCTGCT...CCACTGGATCCTCGACAGGAAGCCACCCTGCGTGGGGACTGCAGGCACACAAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAGGGCGTGGTTGGCACTGAGAAGCTTGGAGCCCTCACTGCAGCCCCAGAGAGGAGGGAAGGGATaGACTCCACGATGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGRAWLALRSLEPSLQPQRGGKG*TPRCPA Trigger: AGCTGGACATCGTGGAGTTCATCCCTTCCCTCCTCT...CTGGGGCTGCAGTGAGGGCTCCAAGCTTCTCAGTGCCAACCACGCCCTGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | TTTGTGTGCCTGCAGTCCCCACGCAGGGTGGCTTCCTGTCGAGGATCCAGTGGGTCCAGCCTGATGCTCTaGGGAATCACCTCGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FVCLQSPRRVASCRGSSGSSLML*GITSKR Trigger: CCGCTTCGAGGTGATTCCCCAGAGCATCAGGCTGGA...CCCACTGGATCCTCGACAGGAAGCCACCCTGCGTGGGGACTGCAGGCACACAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| 3UTR CAA 72 bp | GAAGTCACTGCGAGGCAGATTGAGAGGTGCACTGATTaGACTGACGATGGCGGTGGGGCCCCAGGAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVTARQIERCTD*TDDGGGAPGGG Trigger: CCCACCTCCTGGGGCCCCACCGCCATCGTCAGTCAAATCAGTGCACCTCTCAATCTGCCTCGCAGTGACTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAGGGCGTGGTTGGCACTGAGAAGCTTGGAGCCCTCACTGCAGCCCCAGATCGAGAGGCCCATTTaGTGTCACTTTCCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGRAWLALRSLEPSLQPQIERPI*CHFPPS Trigger: ACTGGGAGGAAAGTGACATCAAATGGGCCTCTCGAT...CTGGGGCTGCAGTGAGGGCTCCAAGCTTCTCAGTGCCAACCACGCCCTGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | GGCGTGGTTGGCACTGAGAAGCTTGGAGCCCTCACTGCAGCCCCAGCGTTTCCTAGCCCAGCAGAGAGCTaGGGATCATGGGATATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVVGTEKLGALTAAPAFPSPAES*GSWDIG Trigger: CCCAATATCCCATGATCCTCAGCTCTCTGCTGGGCT...AGGAAACGCTGGGGCTGCAGTGAGGGCTCCAAGCTTCTCAGTGCCAACCACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | CATACACACATGGGCACTTGGCTCTGGAAACACCTGGCCCTGGCCCAGGGCTTCGAAGAGCTGAATGCCTaGGCCCAGCAGAGAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HTHMGTWLWKHLALAQGFEELNA*AQQRAE Trigger: CTCAGCTCTCTGCTGGGCTCAGGCATTCAGCTCTTC...GAAGCCCTGGGCCAGGGCCAGGTGTTTCCAGAGCCAAGTGCCCATGTGTGTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | CATACACACATGGGCACTTGGCTCTGGAAACACCTGGCCCTGGCCCAGGGCTTCGCAACGCCACCATGGTaGGAAACGGTACTGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTHMGTWLWKHLALAQGFATPPW*ETVLLL Trigger: CAGGAGCAGTACCGTTTCCCACCATGGTGGCGTTGC...GAAGCCCTGGGCCAGGGCCAGGTGTTTCCAGAGCCAAGTGCCCATGTGTGTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | GGCGTGGTTGGCACTGAGAAGCTTGGAGCCCTCACTGCAGCCCCAGCGTTTCCTATCTGCCGGGGAATCTaGTTTGTGCGCACAGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVVGTEKLGALTAAPAFPICRGI*FVRTGL Trigger: CAACCCTGTGCGCACAAACCAGATTCCCCGGCAGAT...AGGAAACGCTGGGGCTGCAGTGAGGGCTCCAAGCTTCTCAGTGCCAACCACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| 3UTR CAA 72 bp | GGCTTTAGCCACCTCTTCCCATACACACATGGGCACTaGGCTCTGGAAACACCTGGCCCTGGCCCAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFSHLFPYTHGH*ALETPGPGPGL Trigger: AAGCCCTGGGCCAGGGCCAGGTGTTTCCAGAGCCAAGTGCCCATGTGTGTATGGGAAGAGGTGGCTAAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTGTCCCAGGGAACCAGGACATGTCCTTGTAGTGACCAAGTGTTCCCAGAGAGCTCCAGCCGGGTaGCCACAGGCAGGTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCCPREPGHVLVVTKCSQRAPAG*PQAGCQ Trigger: CTGACAACCTGCCTGTGGCCACCCGGCTGGAGCTCT...CTGGGAACACTTGGTCACTACAAGGACATGTCCTGGTTCCCTGGGACAGCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | TTTTGTGTGCCTGCAGTCCCCACGCAGGGTGGCTTCCTGTCGAGGATCCAGTGGCCTCCTTGTTGTAGTTaGCGATGTCCTTCCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FCVPAVPTQGGFLSRIQWPPCCS*RCPSAG Trigger: CCCTGCGGAAGGACATCGCCAACTACAACAAGGAGG...CCACTGGATCCTCGACAGGAAGCCACCCTGCGTGGGGACTGCAGGCACACAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | GGCGTGGTTGGCACTGAGAAGCTTGGAGCCCTCACTGCAGCCCCAGCGTTTCCTCACAGGGTTGTCATATaGCTGCTTGCGGAAGCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVVGTEKLGALTAAPAFPHRVVI*LLAEAE Trigger: TTCGGCTTCCGCAAGCAGCCATATGACAACCCTGTG...AGGAAACGCTGGGGCTGCAGTGAGGGCTCCAAGCTTCTCAGTGCCAACCACGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| 3UTR CAA 72 bp | TGGCTCTGGAAACACCTGGCCCTGGCCCAGGGCTTCTaGGCACGAGAACAGTCACTGAGGTCTCACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WLWKHLALAQGF*AREQSLRSHFF Trigger: GAAGAAGTGAGACCTCAGTGACTGTTCTCGTGCCAAGAAGCCCTGGGCCAGGGCCAGGTGTTTCCAGAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR GCA 90 bp | TCCTGGTGGATGCCACTCAGTGCTGCGAAGTCACTGCGAGGCAGATTGAGAGGTCATCACTGTCTCGGTTaGTGGAGTAGAGCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SWWMPLSAAKSLRGRLRGHHCLG*WSRAPA Trigger: GGCTGGAGCTCTACTCCAGCAACCGAGACAGTGATG...ACCTCTCAATCTGCCTCGCAGTGACTTCGCAGCACTGAGTGGCATCCACCAGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR GCA 90 bp | TTTTGTGTGCCTGCAGTCCCCACGCAGGGTGGCTTCCTGTCGAGGATCCAGTGGGGGGAATCTGGTTTGTaGGCACAGGGTTGTCATATG | + |
|
Preference number: 4 (lower is better) Translates to: FCVPAVPTQGGFLSRIQWGESGL*AQGCHM Trigger: CATATGACAACCCTGTGCGCACAAACCAGATTCCCC...CCACTGGATCCTCGACAGGAAGCCACCCTGCGTGGGGACTGCAGGCACACAAAA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| 3UTR CAA 72 bp | GTGCGGTGCCCCAGAGGGAAAGACAGGGAATCAATCTaGAGGGGTGAGCACCCTAGTCTAGTGGCTTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRCPRGKDRESI*RGEHPSLVALA Trigger: GGCTAAAGCCACTAGACTAGGGTGCTCACCCCTCAAGATTGATTCCCTGTCTTTCCCTCTGGGGCACCGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | AGAGATCTGAAGACTCCAGACCTGAAAGTAAGGGAAGGGGTCCACCATCACCCTAGCCGATGGTCCCTGTaGGCAGCCAGAAGGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RDLKTPDLKVREGVHHHPSRWSL*AARRTG Trigger: TCCTGTCCTTCTGGCTGCTCACAGGGACCATCGGCT...AGGGTGATGGTGGACCCCTTCCCTTACTTTCAGGTCTGGAGTCTTCAGATCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | CATACACACATGGGCACTTGGCTCTGGAAACACCTGGCCCTGGCCCAGGGCTTCACTGGGTCGTTTTGGTaGAAATTGATTGGCGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: HTHMGTWLWKHLALAQGFTGSFW*KLIGAT Trigger: AGTCGCGCCAATCAATTTCCACCAAAACGACCCAGT...GAAGCCCTGGGCCAGGGCCAGGTGTTTCCAGAGCCAAGTGCCCATGTGTGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | TTTTGTGTGCCTGCAGTCCCCACGCAGGGTGGCTTCCTGTCGAGGATCCAGTGGAGGATCATGGGATATTaGGGTGGCCTGAAGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: FCVPAVPTQGGFLSRIQWRIMGY*GGLKTS Trigger: TGATGTCTTCAGGCCACCCCAATATCCCATGATCCT...CCACTGGATCCTCGACAGGAAGCCACCCTGCGTGGGGACTGCAGGCACACAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | ACTCCCAATCACTCTCCACTCTCTGGGCTCCCATTTCTCCAGCCTGATTCCTGGCCTTGTAGGTTATCTTaGTGGGCTGGCAGAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPNHSPLSGLPFLQPDSWPCRLS*WAGRRA Trigger: TGCCCTTCTGCCAGCCCATCAAGATAACCTACAAGG...CCAGGAATCAGGCTGGAGAAATGGGAGCCCAGAGAGTGGAGAGTGATTGGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR GCA 90 bp | ACTCCCAATCACTCTCCACTCTCTGGGCTCCCATTTCTCCAGCCTGATTCCTGGACGACACGGTATGTGTaGTCCTGGTCCTCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TPNHSPLSGLPFLQPDSWTTRYV*SWSSSM Trigger: CATGGAAGAGGACCAGGAGCACACATACCGTGTCGT...CCAGGAATCAGGCTGGAGAAATGGGAGCCCAGAGAGTGGAGAGTGATTGGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR GCA 90 bp | CCCCATGCAGCCTGGGGGTCTAGGAACACTGTGCCAGGAGTTACATTCCAAATGCGTTGTTCAGGGATCTaGCGGGGAATCTGGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PHAAWGSRNTVPGVTFQMRCSGI*RGIWFV Trigger: CACAAACCAGATTCCCCGGCAGATCCCTGAACAACG...CATTTGGAATGTAACTCCTGGCACAGTGTTCCTAGACCCCCAGGCTGCATGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR GCA 90 bp | TCCTGCTGTCCCAGGGAACCAGGACATGTCCTTGTAGTGACCAAGTGTTCCCAGGACAAACATGTAGGCTaGGTAGAAGCCGATGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SCCPREPGHVLVVTKCSQDKHVG*VEADGP Trigger: GGGACCATCGGCTTCTACGCAGCCTACATGTTTGTC...CTGGGAACACTTGGTCACTACAAGGACATGTCCTGGTTCCCTGGGACAGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | GCTTTAGCCACCTCTTCCCATACACACATGGGCACTTGGCTCTGGAAACACCTGAAGCAGCAGGAACCTTaGCCACCAAATCATCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ALATSSHTHMGTWLWKHLKQQEP*PPNHRR Trigger: GCGGCGATGATTTGGTGGCCAAGGTTCCTGCTGCTT...CAGGTGTTTCCAGAGCCAAGTGCCCATGTGTGTATGGGAAGAGGTGGCTAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGAGGGAATGGGTTTGGCTAAAGGACCCAAGAATAAATGCTGGGGCCAACACTGTCTCGGTTGCTaGAGTAGAGCTCCAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EEEGMGLAKGPKNKCWGQHCLGC*SRAPAG Trigger: CCCGGCTGGAGCTCTACTCCAGCAACCGAGACAGTG...TTGGCCCCAGCATTTATTCTTGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR GCA 90 bp | CTTCTTCCTTGGTGTTCAGTAAACTCTGGCTGCTTTGAGGAGGGGATCCTGCTGTGCAGAAGAGCTGAATaGCTGAGCCCAGCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLPWCSVNSGCFEEGILLCRRAE*LSPAES Trigger: GCTCTCTGCTGGGCTCAGGCATTCAGCTCTTCTGCA...CAGCAGGATCCCCTCCTCAAAGCAGCCAGAGTTTACTGAACACCAAGGAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR GCA 90 bp | TCCTGGTGGATGCCACTCAGTGCTGCGAAGTCACTGCGAGGCAGATTGAGAGGTTGTCATATGGCTGCTTaGGGAAGCCGAAATAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWWMPLSAAKSLRGRLRGCHMAA*GSRNSS Trigger: GCTACTATTTCGGCTTCCGCAAGCAGCCATATGACA...ACCTCTCAATCTGCCTCGCAGTGACTTCGCAGCACTGAGTGGCATCCACCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | AGAGATCTGAAGACTCCAGACCTGAAAGTAAGGGAAGGGGTCCACCATCACCCTCGGTATGTGTGCTCCTaGTCCTCTTCCATGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDLKTPDLKVREGVHHHPRYVCS*SSSMSS Trigger: GGAGGACATGGAAGAGGACCAGGAGCACACATACCG...AGGGTGATGGTGGACCCCTTCCCTTACTTTCAGGTCTGGAGTCTTCAGATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| 3UTR CAA 72 bp | GCTACTGACCCCTACACCCAAGGTGAGTTTGGTCTCTaGCTACTTAAGAGCAAACTCTGTGACTCGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ATDPYTQGEFGL*LLKSKLCDSPR Trigger: CCTGGGCGAGTCACAGAGTTTGCTCTTAAGTAGCAAGAGACCAAACTCACCTTGGGTGTAGGGGTCAGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | GAGGAAGAGGGAATGGGTTTGGCTAAAGGACCCAAGAATAAATGCTGGGGCCAACGTAGTATTCTTCTGTaGTTCGCTCGGCCACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EEEGMGLAKGPKNKCWGQRSILL*FARPPA Trigger: GGCTGGTGGCCGAGCGAATCACAGAAGAATACTACG...TTGGCCCCAGCATTTATTCTTGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | CCCCATGCAGCCTGGGGGTCTAGGAACACTGTGCCAGGAGTTACATTCCAAATGAGTGCACAGAGTAGGTaGAGTACAGCTGATTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHAAWGSRNTVPGVTFQMSAQSR*STADSP Trigger: AGGAGAATCAGCTGTACTTCACCTACTCTGTGCACT...CATTTGGAATGTAACTCCTGGCACAGTGTTCCTAGACCCCCAGGCTGCATGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | GACCAAGTGTTCCCAGTTAAAACGATGACCAAAGACCTGACTGTTCGGGGCGGCTCTTCTCACTGTTCATaGGAACCTGGAAAGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DQVFPVKTMTKDLTVRGGSSHCS*EPGKGC Trigger: ACACCCCTTTCCAGGTTCTCATGAACAGTGAGAAGA...GCCGCCCCGAACAGTCAGGTCTTTGGTCATCGTTTTAACTGGGAACACTTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | TCCCAAAAGAACTTGCATGGGAGGAAGAGGGAATGGGTTTGGCTAAAGGACCCAAGAAGGACAGGACCATaGGGGTGGTGTAGCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQKNLHGRKREWVWLKDPRRTGP*GWCSQS Trigger: ACTTTGGCTACACCACCCTCATGGTCCTGTCCTTCT...TGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTCCCATGCAAGTTCTTTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR GCA 90 bp | ACTCCCAATCACTCTCCACTCTCTGGGCTCCCATTTCTCCAGCCTGATTCCTGGGAAAACCAGTGGATCTaGACATCACTCATGGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPNHSPLSGLPFLQPDSWENQWI*TSLMVR Trigger: CCTAACCATGAGTGATGTGCAGATCCACTGGTTTTC...CCAGGAATCAGGCTGGAGAAATGGGAGCCCAGAGAGTGGAGAGTGATTGGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | CATACACACATGGGCACTTGGCTCTGGAAACACCTGGCCCTGGCCCAGGGCTTCATTGGCTTGTTAGATTaGTTGCATAGAACTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: HTHMGTWLWKHLALAQGFIGLLD*LHRTSH Trigger: GTGTGAAGTTCTATGCAACCAATCTAACAAGCCAAT...GAAGCCCTGGGCCAGGGCCAGGTGTTTCCAGAGCCAAGTGCCCATGTGTGTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTGTCCCAGGGAACCAGGACATGTCCTTGTAGTGACCAAGTGTTCCCAGTCTGCACATCACTCATaGTTAGGTAAGTGTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SCCPREPGHVLVVTKCSQSAHHS*LGKCPI Trigger: GATGGGACACTTACCTAACCATGAGTGATGTGCAGA...CTGGGAACACTTGGTCACTACAAGGACATGTCCTGGTTCCCTGGGACAGCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCCTTGGTGTTCAGTAAACTCTGGCTGCTTTGAGGAGGGGATCCTGCTGCATGGGATATTGGGGTaGCCTGAAGACATCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: LLPWCSVNSGCFEEGILLHGILG*PEDITM Trigger: CATGGTGATGTCTTCAGGCCACCCCAATATCCCATG...CAGCAGGATCCCCTCCTCAAAGCAGCCAGAGTTTACTGAACACCAAGGAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | CCCCATGCAGCCTGGGGGTCTAGGAACACTGTGCCAGGAGTTACATTCCAAATGGGTGGTAATAAAGGATaGATGAGAGGTGATTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHAAWGSRNTVPGVTFQMGGNKG*MRGDCA Trigger: TGCACAATCACCTCTCATTCATCCTTTATTACCACC...CATTTGGAATGTAACTCCTGGCACAGTGTTCCTAGACCCCCAGGCTGCATGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | GAGGAAGAGGGAATGGGTTTGGCTAAAGGACCCAAGAATAAATGCTGGGGCCAAGCATGGCCACGAAGATaGCAATCAGGATCATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EEEGMGLAKGPKNKCWGQAWPRR*QSGSCR Trigger: TCTGCATGATCCTGATTGTCATCTTCGTGGCCATGC...TTGGCCCCAGCATTTATTCTTGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | GAGGAAGAGGGAATGGGTTTGGCTAAAGGACCCAAGAATAAATGCTGGGGCCAAGACTATGCTGATTTGTaGGCAGGACACCACCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EEEGMGLAKGPKNKCWGQDYADL*AGHHQD Trigger: ATCCTGGTGGTGTCCTGCTCACAAATCAGCATAGTC...TTGGCCCCAGCATTTATTCTTGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR GCA 90 bp | GACCAAGTGTTCCCAGTTAAAACGATGACCAAAGACCTGACTGTTCGGGGCGGCCTCTCCCAGGTTCTCTaGCTTGTAGGTTATCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DQVFPVKTMTKDLTVRGGLSQVL*LVGYLD Trigger: ATCAAGATAACCTACAAGGCAGAGAACCTGGGAGAG...GCCGCCCCGAACAGTCAGGTCTTTGGTCATCGTTTTAACTGGGAACACTTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | GCTTTAGCCACCTCTTCCCATACACACATGGGCACTTGGCTCTGGAAACACCTGCTGTTCATGAGAACCTaGAAAGGGGTGTTGACAATC | + |
|
Preference number: 4 (lower is better) Translates to: ALATSSHTHMGTWLWKHLLFMRT*KGVLTI Trigger: GATTGTCAACACCCCTTTCCAGGTTCTCATGAACAG...CAGGTGTTTCCAGAGCCAAGTGCCCATGTGTGTATGGGAAGAGGTGGCTAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| 3UTR CAA 72 bp | GAGTGGCTGCTACTGACCCCTACACCCAAGGTGAGTTaGGTCTCTTGCTACTTAAGAGCAAACTCTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: EWLLLTPTPKVS*VSCYLRANSVT Trigger: AGTCACAGAGTTTGCTCTTAAGTAGCAAGAGACCAAACTCACCTTGGGTGTAGGGGTCAGTAGCAGCCACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | AGAGATCTGAAGACTCCAGACCTGAAAGTAAGGGAAGGGGTCCACCATCACCCTAGTGCTTTCCCCAGATaGAGCAATTCAACACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RDLKTPDLKVREGVHHHPSAFPR*SNSTQS Trigger: GCTTTGTGTTGAATTGCTTCATCTGGGGAAAGCACT...AGGGTGATGGTGGACCCCTTCCCTTACTTTCAGGTCTGGAGTCTTCAGATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR GCA 90 bp | GACCAAGTGTTCCCAGTTAAAACGATGACCAAAGACCTGACTGTTCGGGGCGGCCAGGGACATAGAAGGTaGTTCCTTTACATGTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DQVFPVKTMTKDLTVRGGQGHRR*FLYMLD Trigger: GTCTAACATGTAAAGGAAGCACCTTCTATGTCCCTG...GCCGCCCCGAACAGTCAGGTCTTTGGTCATCGTTTTAACTGGGAACACTTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR GCA 90 bp | AGTGACCAAGTGTTCCCAGTTAAAACGATGACCAAAGACCTGACTGTTCGGGGCACTGCTCCTGATGAGTaGTTTCCCCAGATGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SDQVFPVKTMTKDLTVRGTAPDE*FPQMKQ Trigger: TTGCTTCATCTGGGGAAAGCACTCATCAGGAGCAGT...GCCCCGAACAGTCAGGTCTTTGGTCATCGTTTTAACTGGGAACACTTGGTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | CCCCATGCAGCCTGGGGGTCTAGGAACACTGTGCCAGGAGTTACATTCCAAATGCACTGTCAAGGTTATTaGCTTGTTAGATTGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHAAWGSRNTVPGVTFQMHCQGY*LVRLVA Trigger: TGCAACCAATCTAACAAGCCAATAACCTTGACAGTG...CATTTGGAATGTAACTCCTGGCACAGTGTTCCTAGACCCCCAGGCTGCATGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGAGGGAATGGGTTTGGCTAAAGGACCCAAGAATAAATGCTGGGGCCAAACCCAGACTCCTCCATaGTGTCTTCAATGTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: EEEGMGLAKGPKNKCWGQTQTPP*CLQCHP Trigger: AGGATGACATTGAAGACACCATGGAGGAGTCTGGGT...TTGGCCCCAGCATTTATTCTTGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| 3UTR CAA 72 bp | CCAAAAGAACTTGCATGGGAGGAAGAGGGAATGGGTTaGGCTAAAGGACCCAAGAATAAATGCTGGGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PKELAWEEEGMG*AKGPKNKCWGQ Trigger: TTGGCCCCAGCATTTATTCTTGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTCCCATGCAAGTTCTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR GCA 90 bp | TCCCAAAAGAACTTGCATGGGAGGAAGAGGGAATGGGTTTGGCTAAAGGACCCACAGCAGCATATATCTTaGGGACAAACATGTAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQKNLHGRKREWVWLKDPQQHIS*GQTCRL Trigger: CAGCCTACATGTTTGTCCGCAAGATATATGCTGCTG...TGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTCCCATGCAAGTTCTTTTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCCTTGGTGTTCAGTAAACTCTGGCTGCTTTGAGGAGGGGATCCTGCTGGTAATAAAGGATGAATaGGAGGTGATTGTGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLPWCSVNSGCFEEGILLVIKDE*EVIVQV Trigger: TACCTGCACAATCACCTCTCATTCATCCTTTATTAC...CAGCAGGATCCCCTCCTCAAAGCAGCCAGAGTTTACTGAACACCAAGGAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR TCA 90 bp | AACCACAGAAAAATGTATCCCTACAGACTGGATGAGATGAAGGAAATGGAAGGGATCATGCAGAAGAGCTaGATGCCTGAGCCCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NHRKMYPYRLDEMKEMEGIMQKS*MPEPSR Trigger: TCTGCTGGGCTCAGGCATTCAGCTCTTCTGCATGAT...CCCTTCCATTTCCTTCATCTCATCCAGTCTGTAGGGATACATTTTTCTGTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| 3UTR CAA 72 bp | TTCTCAGAGAAGTTTTCTGGGTGTTCCCAAAAGAACTaGCATGGGAGGAAGAGGGAATGGGTTTGGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSEKFSGCSQKN*HGRKREWVWLK Trigger: CTTTAGCCAAACCCATTCCCTCTTCCTCCCATGCAAGTTCTTTTGGGAACACCCAGAAAACTTCTCTGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CCA 90 bp | AACCACAGAAAAATGTATCCCTACAGACTGGATGAGATGAAGGAAATGGAAGGGTCCTCTGCACACAGCTaGAAGTACACCATGACTATG | + |
|
Preference number: 4 (lower is better) Translates to: NHRKMYPYRLDEMKEMEGSSAHS*KYTMTM Trigger: CATAGTCATGGTGTACTTCCAGCTGTGTGCAGAGGA...CCCTTCCATTTCCTTCATCTCATCCAGTCTGTAGGGATACATTTTTCTGTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CAA 90 bp | GGCGTGGTTGGCACTGAGAAGCTTGGAGCCCTCACTGCAGCCCCAGCGTTTCCTGCCGGGGAATCTGGTTaGTGCGCACAGGGTTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GVVGTEKLGALTAAPAFPAGESG*CAQGCH Trigger: ATGACAACCCTGTGCGCACAAACCAGATTCCCCGGC...AGGAAACGCTGGGGCTGCAGTGAGGGCTCCAAGCTTCTCAGTGCCAACCACGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CAA 90 bp | GGCGTGGTTGGCACTGAGAAGCTTGGAGCCCTCACTGCAGCCCCAGCGTTTCCTTTTGTGCGCACAGGGTaGTCATATGGCTGCTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GVVGTEKLGALTAAPAFPFVRTG*SYGCLR Trigger: CCGCAAGCAGCCATATGACAACCCTGTGCGCACAAA...AGGAAACGCTGGGGCTGCAGTGAGGGCTCCAAGCTTCTCAGTGCCAACCACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS GCA 90 bp | GCCGGGGAATCTGGTTTGTGCGCACAGGGTTGTCATATGGCTGCTTaGGGAAGCCGAAATAGTAGCCCAAGTAGACAAGGGGCAGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AGESGLCAQGCHMAA*GSRNSSPSRQGAGR Trigger: TCTCCCTGCCCCTTGTCTACTTGGGCTACTATTTCGGCTTCCGCAAGCAGCCATATGACAACCCTGTGCGCACAAACCAGATTCCCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS CCA 90 bp | AGGGATCTGCCGGGGAATCTGGTTTGTGCGCACAGGGTTGTCATATaGCTGCTTGCGGAAGCCGAAATAGTAGCCCAAGTAGACAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RDLPGNLVCAHRVVI*LLAEAEIVAQVDKG Trigger: CCCCTTGTCTACTTGGGCTACTATTTCGGCTTCCGCAAGCAGCCATATGACAACCCTGTGCGCACAAACCAGATTCCCCGGCAGATCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS CCA 90 bp | AATCGGTTCATGTACCACCGTTGTTCAGGGATCTGCCGGGGAATCTaGTTTGTGCGCACAGGGTTGTCATATGGCTGCTTGCGGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NRFMYHRCSGICRGI*FVRTGLSYGCLRKP Trigger: CGGCTTCCGCAAGCAGCCATATGACAACCCTGTGCGCACAAACCAGATTCCCCGGCAGATCCCTGAACAACGGTGGTACATGAACCGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CAA 90 bp | CATACACACATGGGCACTTGGCTCTGGAAACACCTGGCCCTGGCCCAGGGCTTCGTAAGCTTCACAGCCTaGATCTCTACTGGGTCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HTHMGTWLWKHLALAQGFVSFTA*ISTGSF Trigger: AAACGACCCAGTAGAGATCAAGGCTGTGAAGCTTAC...GAAGCCCTGGGCCAGGGCCAGGTGTTTCCAGAGCCAAGTGCCCATGTGTGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS TCA 90 bp | GGCCACGAAGATGACAATCAGGATCATGCAGAAGAGCTGAATGCCTaGGCCCAGCAGAGAGCTGAGGATCATGGGATATTGGGGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GHEDDNQDHAEELNA*AQQRAEDHGILGWP Trigger: AGGCCACCCCAATATCCCATGATCCTCAGCTCTCTGCTGGGCTCAGGCATTCAGCTCTTCTGCATGATCCTGATTGTCATCTTCGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS GCA 90 bp | AGGATGCCCACAAATCGGTTCATGTACCACCGTTGTTCAGGGATCTaGCGGGGAATCTGGTTTGTGCGCACAGGGTTGTCATATGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RMPTNRFMYHRCSGI*RGIWFVRTGLSYGC Trigger: GCAGCCATATGACAACCCTGTGCGCACAAACCAGATTCCCCGGCAGATCCCTGAACAACGGTGGTACATGAACCGATTTGTGGGCATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CAA 90 bp | TTTGTGTGCCTGCAGTCCCCACGCAGGGTGGCTTCCTGTCGAGGATCCAGTGGGGGCTTGTTAGATTGGTaGCATAGAACTTCACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: FVCLQSPRRVASCRGSSGGLLDW*HRTSHF Trigger: GAAGTGTGAAGTTCTATGCAACCAATCTAACAAGCC...CCCACTGGATCCTCGACAGGAAGCCACCCTGCGTGGGGACTGCAGGCACACAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CAA 90 bp | TCCTGCTGTCCCAGGGAACCAGGACATGTCCTTGTAGTGACCAAGTGTTCCCAGGAGGATCATGGGATATaGGGGTGGCCTGAAGACATC | + |
|
Preference number: 5 (lower is better) Translates to: SCCPREPGHVLVVTKCSQEDHGI*GWPEDI Trigger: GATGTCTTCAGGCCACCCCAATATCCCATGATCCTC...CTGGGAACACTTGGTCACTACAAGGACATGTCCTGGTTCCCTGGGACAGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS TCA 90 bp | CCCCTCTCAGCACCTCTCCCAGGTTCTCTGCCTTGTAGGTTATCTTaGTGGGCTGGCAGAAGGGCAATGAGTAGTACTCGTAAGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLSAPLPGSLPCRLS*WAGRRAMSSTRKEA Trigger: AGCTTCCTTACGAGTACTACTCATTGCCCTTCTGCCAGCCCATCAAGATAACCTACAAGGCAGAGAACCTGGGAGAGGTGCTGAGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS GCA 90 bp | TCATGTACCACCGTTGTTCAGGGATCTGCCGGGGAATCTGGTTTGTaGGCACAGGGTTGTCATATGGCTGCTTGCGGAAGCCGAAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: SCTTVVQGSAGESGL*AQGCHMAACGSRNS Trigger: ACTATTTCGGCTTCCGCAAGCAGCCATATGACAACCCTGTGCGCACAAACCAGATTCCCCGGCAGATCCCTGAACAACGGTGGTACATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CAA 90 bp | TCCCAAAAGAACTTGCATGGGAGGAAGAGGGAATGGGTTTGGCTAAAGGACCCAGTTCATGTACCACCGTaGTTCAGGGATCTGCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQKNLHGRKREWVWLKDPVHVPP*FRDLPG Trigger: CCCCGGCAGATCCCTGAACAACGGTGGTACATGAAC...TGGGTCCTTTAGCCAAACCCATTCCCTCTTCCTCCCATGCAAGTTCTTTTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS TCA 90 bp | CCAAGCATGGCCACGAAGATGACAATCAGGATCATGCAGAAGAGCTaGATGCCTGAGCCCAGCAGAGAGCTGAGGATCATGGGATATTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSMATKMTIRIMQKS*MPEPSRELRIMGYW Trigger: CCAATATCCCATGATCCTCAGCTCTCTGCTGGGCTCAGGCATTCAGCTCTTCTGCATGATCCTGATTGTCATCTTCGTGGCCATGCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS GCA 90 bp | GAGCTGAGGATCATGGGATATTGGGGTGGCCTGAAGACATCACCATaGACAAGCTTCCACCCAGACTCCTCCATGGTGTCTTCAATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ELRIMGYWGGLKTSP*TSFHPDSSMVSSMS Trigger: TGACATTGAAGACACCATGGAGGAGTCTGGGTGGAAGCTTGTGCATGGTGATGTCTTCAGGCCACCCCAATATCCCATGATCCTCAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS CCA 90 bp | AAGCTGGGTCCGAGAGCTGGTAAGCTTCACAGCCTTGATCTCTACTaGGTCGTTTTGGTGGAAATTGATTGGCGCGACTCCAGGGACATA | + |
|
Preference number: 5 (lower is better) Translates to: KLGPRAGKLHSLDLY*VVLVEIDWRDSRDI Trigger: TATGTCCCTGGAGTCGCGCCAATCAATTTCCACCAAAACGACCCAGTAGAGATCAAGGCTGTGAAGCTTACCAGCTCTCGGACCCAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CAA 90 bp | CATACACACATGGGCACTTGGCTCTGGAAACACCTGGCCCTGGCCCAGGGCTTCGTCAAGGTTATTGGCTaGTTAGATTGGTTGCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: HTHMGTWLWKHLALAQGFVKVIG*LDWLHR Trigger: TCTATGCAACCAATCTAACAAGCCAATAACCTTGAC...GAAGCCCTGGGCCAGGGCCAGGTGTTTCCAGAGCCAAGTGCCCATGTGTGTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS-3UTR CAA 90 bp | CTTCTTCCTTGGTGTTCAGTAAACTCTGGCTGCTTTGAGGAGGGGATCCTGCTGCATCGAGAGGCCCATTaGATGTCACTTTCCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLPWCSVNSGCFEEGILLHREAH*MSLSSQ Trigger: CTGGGAGGAAAGTGACATCAAATGGGCCTCTCGATG...CAGCAGGATCCCCTCCTCAAAGCAGCCAGAGTTTACTGAACACCAAGGAAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS TCA 90 bp | GTTCTCTGCCTTGTAGGTTATCTTGATGGGCTGGCAGAAGGGCAATaGGTAGTACTCGTAAGGAAGCTGGGTCCGAGAGCTGGTAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLCLVGYLDGLAEGQ*VVLVRKLGPRAGKL Trigger: AAGCTTACCAGCTCTCGGACCCAGCTTCCTTACGAGTACTACTCATTGCCCTTCTGCCAGCCCATCAAGATAACCTACAAGGCAGAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS TCA 90 bp | CTCCTGGTCCTCTTCCATGTCCTCCCGGTGGTAATAAAGGATGAATaGGAGGTGATTGTGCAGGTAGATCTTGTTGACATCCGTGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLVLFHVLPVVIKDE*EVIVQVDLVDIREA Trigger: GGCTTCACGGATGTCAACAAGATCTACCTGCACAATCACCTCTCATTCATCCTTTATTACCACCGGGAGGACATGGAAGAGGACCAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS TCA 90 bp | CCATGGTGGGAAACGGTACTGCTCCTGATGAGTGCTTTCCCCAGATaGAGCAATTCAACACAAAGCAGATGCCGAAAACCACACCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PWWETVLLLMSAFPR*SNSTQSRCRKPHQD Trigger: ATCCTGGTGTGGTTTTCGGCATCTGCTTTGTGTTGAATTGCTTCATCTGGGGAAAGCACTCATCAGGAGCAGTACCGTTTCCCACCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS TCA 90 bp | ATCCTCTGCACACAGCTGGAAGTACACCATGACTATGCTGATTTGTaGGCAGGACACCACCAGGATGATGAAAACGAGGAACAGGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: ILCTQLEVHHDYADL*AGHHQDDENEEQET Trigger: GGTTTCCTGTTCCTCGTTTTCATCATCCTGGTGGTGTCCTGCTCACAAATCAGCATAGTCATGGTGTACTTCCAGCTGTGTGCAGAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS CCA 90 bp | ACCAGCCGGCTCTGTTCCACTGTCAAGGTTATTGGCTTGTTAGATTaGTTGCATAGAACTTCACACTTCTTCTCACTGTTCATGAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: TSRLCSTVKVIGLLD*LHRTSHFFSLFMRT Trigger: GGTTCTCATGAACAGTGAGAAGAAGTGTGAAGTTCTATGCAACCAATCTAACAAGCCAATAACCTTGACAGTGGAACAGAGCCGGCTGGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS GCA 72 bp | ACCGTTGTTCAGGGATCTGCCGGGGAATCTGGTTTGTaGGCACAGGGTTGTCATATGGCTGCTTGCGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TVVQGSAGESGL*AQGCHMAACGS Trigger: GCTTCCGCAAGCAGCCATATGACAACCCTGTGCGCACAAACCAGATTCCCCGGCAGATCCCTGAACAACGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS CAA 72 bp | ACCACCGTTGTTCAGGGATCTGCCGGGGAATCTGGTTaGTGCGCACAGGGTTGTCATATGGCTGCTTGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: TTVVQGSAGESG*CAQGCHMAACG Trigger: TCCGCAAGCAGCCATATGACAACCCTGTGCGCACAAACCAGATTCCCCGGCAGATCCCTGAACAACGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS CAA 90 bp | GATCCCAGCCATGAGGATGCCCACAAATCGGTTCATGTACCACCGTaGTTCAGGGATCTGCCGGGGAATCTGGTTTGTGCGCACAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: DPSHEDAHKSVHVPP*FRDLPGNLVCAHRV Trigger: AACCCTGTGCGCACAAACCAGATTCCCCGGCAGATCCCTGAACAACGGTGGTACATGAACCGATTTGTGGGCATCCTCATGGCTGGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS CCA 72 bp | GGGAGATCCCGAACCACATACACAGCAACGCCACCATaGTGGGAAACGGTACTGCTCCTGATGAGTGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GRSRTTYTATPP*WETVLLLMSAF Trigger: GAAAGCACTCATCAGGAGCAGTACCGTTTCCCACCATGGTGGCGTTGCTGTGTATGTGGTTCGGGATCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS CAA 90 bp | GGTTCATGTACCACCGTTGTTCAGGGATCTGCCGGGGAATCTGGTTaGTGCGCACAGGGTTGTCATATGGCTGCTTGCGGAAGCCGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: GSCTTVVQGSAGESG*CAQGCHMAACGSRN Trigger: ATTTCGGCTTCCGCAAGCAGCCATATGACAACCCTGTGCGCACAAACCAGATTCCCCGGCAGATCCCTGAACAACGGTGGTACATGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS CCA 72 bp | CCGGGGAATCTGGTTTGTGCGCACAGGGTTGTCATATaGCTGCTTGCGGAAGCCGAAATAGTAGCCCAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: PGNLVCAHRVVI*LLAEAEIVAQV Trigger: TACTTGGGCTACTATTTCGGCTTCCGCAAGCAGCCATATGACAACCCTGTGCGCACAAACCAGATTCCCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS CCA 72 bp | ATGTACCACCGTTGTTCAGGGATCTGCCGGGGAATCTaGTTTGTGCGCACAGGGTTGTCATATGGCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: MYHRCSGICRGI*FVRTGLSYGCL Trigger: CAAGCAGCCATATGACAACCCTGTGCGCACAAACCAGATTCCCCGGCAGATCCCTGAACAACGGTGGTACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS CAA 72 bp | CATGAGGATGCCCACAAATCGGTTCATGTACCACCGTaGTTCAGGGATCTGCCGGGGAATCTGGTTTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: HEDAHKSVHVPP*FRDLPGNLVCA Trigger: CGCACAAACCAGATTCCCCGGCAGATCCCTGAACAACGGTGGTACATGAACCGATTTGTGGGCATCCTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS TCA 72 bp | GCACCTCTCCCAGGTTCTCTGCCTTGTAGGTTATCTTaGTGGGCTGGCAGAAGGGCAATGAGTAGTACTCGT | + |
|
Preference number: 6 (lower is better) Translates to: APLPGSLPCRLS*WAGRRAMSSTR Trigger: ACGAGTACTACTCATTGCCCTTCTGCCAGCCCATCAAGATAACCTACAAGGCAGAGAACCTGGGAGAGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS TCA 72 bp | GATGGCATAGACCAGGACGTAGAATGCAGATCCCCCTaGGACAAGGAAATTCCTCCACCACCAGCGGTAATC | + |
|
Preference number: 6 (lower is better) Translates to: DGIDQDVECRSP*DKEIPPPPAVI Trigger: GATTACCGCTGGTGGTGGAGGAATTTCCTTGTCTCAGGGGGATCTGCATTCTACGTCCTGGTCTATGCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS GCA 72 bp | TCTGGTTTGTGCGCACAGGGTTGTCATATGGCTGCTTaGGGAAGCCGAAATAGTAGCCCAAGTAGACAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGLCAQGCHMAA*GSRNSSPSRQG Trigger: CCCTTGTCTACTTGGGCTACTATTTCGGCTTCCGCAAGCAGCCATATGACAACCCTGTGCGCACAAACCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS GCA 72 bp | ACAAATCGGTTCATGTACCACCGTTGTTCAGGGATCTaGCGGGGAATCTGGTTTGTGCGCACAGGGTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TNRFMYHRCSGI*RGIWFVRTGLS Trigger: TGACAACCCTGTGCGCACAAACCAGATTCCCCGGCAGATCCCTGAACAACGGTGGTACATGAACCGATTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
||
| CDS GCA 72 bp | CACAGCAGCATATATCTTGCGGACAAACATGTAGGCTaGGTAGAAGCCGATGGTCCCTGTGAGCAGCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: HSSIYLADKHVG*VEADGPCEQPE Trigger: TTCTGGCTGCTCACAGGGACCATCGGCTTCTACGCAGCCTACATGTTTGTCCGCAAGATATATGCTGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| CDS CCA 72 bp | CCGAGAGCTGGTAAGCTTCACAGCCTTGATCTCTACTaGGTCGTTTTGGTGGAAATTGATTGGCGCGACTCC | + |
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Preference number: 6 (lower is better) Translates to: PRAGKLHSLDLY*VVLVEIDWRDS Trigger: GGAGTCGCGCCAATCAATTTCCACCAAAACGACCCAGTAGAGATCAAGGCTGTGAAGCTTACCAGCTCTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| CDS CAA 90 bp | CCGAGAGCTGGTAAGCTTCACAGCCTTGATCTCTACTGGGTCGTTTaGGTGGAAATTGATTGGCGCGACTCCAGGGACATAGAAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: PRAGKLHSLDLYWVV*VEIDWRDSRDIEGA Trigger: AGCACCTTCTATGTCCCTGGAGTCGCGCCAATCAATTTCCACCAAAACGACCCAGTAGAGATCAAGGCTGTGAAGCTTACCAGCTCTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| CDS TCA 72 bp | CTTGTAGGTTATCTTGATGGGCTGGCAGAAGGGCAATaGGTAGTACTCGTAAGGAAGCTGGGTCCGAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LVGYLDGLAEGQ*VVLVRKLGPRA Trigger: AGCTCTCGGACCCAGCTTCCTTACGAGTACTACTCATTGCCCTTCTGCCAGCCCATCAAGATAACCTACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| CDS GCA 72 bp | GCCACCATGGTGGGAAACGGTACTGCTCCTGATGAGTaGTTTCCCCAGATGAAGCAATTCAACACAAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: ATMVGNGTAPDE*FPQMKQFNTKQ Trigger: CTGCTTTGTGTTGAATTGCTTCATCTGGGGAAAGCACTCATCAGGAGCAGTACCGTTTCCCACCATGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| CDS CAA 72 bp | TTCTCCTTAGTGGGGTCAATTTCTTGGGGTAAGGAGTaGGCACCCTCGGGTAGGGTACATGAACTCTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: FSLVGSISWGKE*APSGRVHELFS Trigger: CGAGAAGAGTTCATGTACCCTACCCGAGGGTGCCAACTCCTTACCCCAAGAAATTGACCCCACTAAGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| CDS CAA 90 bp | CGCTCGGCCACCAGCCGGCTCTGTTCCACTGTCAAGGTTATTGGCTaGTTAGATTGGTTGCATAGAACTTCACACTTCTTCTCACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: RSATSRLCSTVKVIG*LDWLHRTSHFFSLF Trigger: GAACAGTGAGAAGAAGTGTGAAGTTCTATGCAACCAATCTAACAAGCCAATAACCTTGACAGTGGAACAGAGCCGGCTGGTGGCCGAGCG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| CDS CAA 72 bp | GGAAGCTGGGTCCGAGAGCTGGTAAGCTTCACAGCCTaGATCTCTACTGGGTCGTTTTGGTGGAAATTGATT | + |
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Preference number: 6 (lower is better) Translates to: GSWVRELVSFTA*ISTGSFWWKLI Trigger: AATCAATTTCCACCAAAACGACCCAGTAGAGATCAAGGCTGTGAAGCTTACCAGCTCTCGGACCCAGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| CDS TCA 72 bp | GAAACGGTACTGCTCCTGATGAGTGCTTTCCCCAGATaGAGCAATTCAACACAAAGCAGATGCCGAAAACCA | + |
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Preference number: 6 (lower is better) Translates to: ETVLLLMSAFPR*SNSTQSRCRKP Trigger: TGGTTTTCGGCATCTGCTTTGTGTTGAATTGCTTCATCTGGGGAAAGCACTCATCAGGAGCAGTACCGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| CDS TCA 72 bp | ACACAGCTGGAAGTACACCATGACTATGCTGATTTGTaGGCAGGACACCACCAGGATGATGAAAACGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: TQLEVHHDYADL*AGHHQDDENEE Trigger: TTCCTCGTTTTCATCATCCTGGTGGTGTCCTGCTCACAAATCAGCATAGTCATGGTGTACTTCCAGCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| CDS CAA 90 bp | AGCCGGCTCTGTTCCACTGTCAAGGTTATTGGCTTGTTAGATTGGTaGCATAGAACTTCACACTTCTTCTCACTGTTCATGAGAACCTGG | + |
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Preference number: 6 (lower is better) Translates to: SRLCSTVKVIGLLDW*HRTSHFFSLFMRTW Trigger: CCAGGTTCTCATGAACAGTGAGAAGAAGTGTGAAGTTCTATGCAACCAATCTAACAAGCCAATAACCTTGACAGTGGAACAGAGCCGGCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| CDS TCA 72 bp | CTCTTCCATGTCCTCCCGGTGGTAATAAAGGATGAATaGGAGGTGATTGTGCAGGTAGATCTTGTTGACATC | + |
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Preference number: 6 (lower is better) Translates to: LFHVLPVVIKDE*EVIVQVDLVDI Trigger: GATGTCAACAAGATCTACCTGCACAATCACCTCTCATTCATCCTTTATTACCACCGGGAGGACATGGAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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| CDS CCA 72 bp | CTCTGTTCCACTGTCAAGGTTATTGGCTTGTTAGATTaGTTGCATAGAACTTCACACTTCTTCTCACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: LCSTVKVIGLLD*LHRTSHFFSLF Trigger: GAACAGTGAGAAGAAGTGTGAAGTTCTATGCAACCAATCTAACAAGCCAATAACCTTGACAGTGGAACAGAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089027.3 |
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