Pregenerated sensors for TM9SF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025016Ensembl transcript IDs: ENSMUST00000025989.10, ENSMUST00000237871.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCAGTGGGAACGCTACATGAGGAAACCTTCCGGCATGCTCATCTaGACCGCAAGGCTTGCAGAACATCTGCAGGTGTGCGCCGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: LQWERYMRKPSGMLI*TARLAEHLQVCAAL Trigger: AAGAGCGGCGCACACCTGCAGATGTTCTGCAAGCCTTGCGGTCCAGATGAGCATGCCGGAAGGTTTCCTCATGTAGCGTTCCCACTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR CCA 90 bp | AATACAGTGATTCTTCTAAGGGCCTGGGCTTCTCCACAGCCACTGTaGCCCGGGAGCCTACACAGCACACCAGCACACTCGAGAGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: NTVILLRAWASPQPL*PGSLHSTPAHSRVS Trigger: AGAGACTCTCGAGTGTGCTGGTGTGCTGTGTAGGCTCCCGGGCCACAGTGGCTGTGGAGAAGCCCAGGCCCTTAGAAGAATCACTGTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR GCA 90 bp | GGCATGCTCATCTGGACCGCAAGGCTTGCAGAACATCTGCAGGTGTaGGCCGCTCTTCTGTCCTACTCTTTCTGCAAATCTAGTCTAGTC | + |
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Preference number: 1 (lower is better) Translates to: GMLIWTARLAEHLQV*AALLSYSFCKSSLV Trigger: GACTAGACTAGATTTGCAGAAAGAGTAGGACAGAAGAGCGGCGCACACCTGCAGATGTTCTGCAAGCCTTGCGGTCCAGATGAGCATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR TCA 90 bp | CTGCAAACATGCTCTGTCTCGCCCAGTTTATACAGTGTGAAGGACTaGACCCAGGCTCTGTGTAAGCTAGGCACCCCAGCATGTAGACTA | + |
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Preference number: 1 (lower is better) Translates to: LQTCSVSPSLYSVKD*TQALCKLGTPACRL Trigger: TAGTCTACATGCTGGGGTGCCTAGCTTACACAGAGCCTGGGTTCAGTCCTTCACACTGTATAAACTGGGCGAGACAGAGCATGTTTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR CCA 90 bp | CTGGAATTTGCAGCAACTGCCTTTAGAAAGAGGCCCCATCGTCAGTaGAAACACGCAAGCATAGCAGCCGTGAGGTACAGGTGGCAAATA | + |
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Preference number: 1 (lower is better) Translates to: LEFAATAFRKRPHRQ*KHASIAAVRYRWQI Trigger: TATTTGCCACCTGTACCTCACGGCTGCTATGCTTGCGTGTTTCCACTGACGATGGGGCCTCTTTCTAAAGGCAGTTGCTGCAAATTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR TCA 90 bp | TTTCCCCTTGAAACAGAGTCCCCCAGAGTAGCGCAGAACTCAGAGTaGGCAATAACTCACTCTCTAGCCCAGTTCCAAACTCAAACAACC | + |
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Preference number: 1 (lower is better) Translates to: FPLETESPRVAQNSE*AITHSLAQFQTQTT Trigger: GGTTGTTTGAGTTTGGAACTGGGCTAGAGAGTGAGTTATTGCTCACTCTGAGTTCTGCGCTACTCTGGGGGACTCTGTTTCAAGGGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR TCA 90 bp | CCTAGTCCACCAGAATTTCACAATCAGCCTCTTTTATGGCAACTATaGCATATCTTTTCGCCTTTGCACACCGCGCACACAGCTCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: PSPPEFHNQPLLWQL*HIFSPLHTAHTAPV Trigger: CACTGGAGCTGTGTGCGCGGTGTGCAAAGGCGAAAAGATATGTCATAGTTGCCATAAAAGAGGCTGATTGTGAAATTCTGGTGGACTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR TCA 90 bp | GTCTTCCCACCTGCTGACTGTCCATGGAGGTTTGTAGGTTCAAGGTaGGCACAGATGAGAAGCCCAAATGAGACTGGTTTTACAGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: VFPPADCPWRFVGSR*AQMRSPNETGFTGK Trigger: TTTTCCTGTAAAACCAGTCTCATTTGGGCTTCTCATCTGTGCTCACCTTGAACCTACAAACCTCCATGGACAGTCAGCAGGTGGGAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR GCA 90 bp | ACAATCAGCCTCTTTTATGGCAACTATGACATATCTTTTCGCCTTTaGACACCGCGCACACAGCTCCAGTGGGAACGCTACATGAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: TISLFYGNYDISFRL*TPRTQLQWERYMRK Trigger: TTTCCTCATGTAGCGTTCCCACTGGAGCTGTGTGCGCGGTGTGCAAAGGCGAAAAGATATGTCATAGTTGCCATAAAAGAGGCTGATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR CCA 90 bp | ATACAGCCTACACAAATCCAGAGTGTATACAAAATGGAAGTGATATaGGCAAACACCATGTCTTCCCACCTGCTGACTGTCCATGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: IQPTQIQSVYKMEVI*ANTMSSHLLTVHGG Trigger: ACCTCCATGGACAGTCAGCAGGTGGGAAGACATGGTGTTTGCCCATATCACTTCCATTTTGTATACACTCTGGATTTGTGTAGGCTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR TCA 90 bp | ATGGAGGTTTGTAGGTTCAAGGTGAGCACAGATGAGAAGCCCAAATaGGACTGGTTTTACAGGAAAACTCTGCTGTTCTTCGAGAACCTT | + |
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Preference number: 1 (lower is better) Translates to: MEVCRFKVSTDEKPK*DWFYRKTLLFFENL Trigger: AAGGTTCTCGAAGAACAGCAGAGTTTTCCTGTAAAACCAGTCTCATTTGGGCTTCTCATCTGTGCTCACCTTGAACCTACAAACCTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR TCA 90 bp | AAAGCAGTCAGTAAGAACCTAGGATCAATGGAAATAGATGTTACTTaGAGCCATCCACAAAAGAGACCCACAAAGTACCCAGTGTTAAGC | + |
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Preference number: 1 (lower is better) Translates to: KAVSKNLGSMEIDVT*SHPQKRPTKYPVLS Trigger: GCTTAACACTGGGTACTTTGTGGGTCTCTTTTGTGGATGGCTTCAAGTAACATCTATTTCCATTGATCCTAGGTTCTTACTGACTGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| 3UTR CCA 90 bp | AGTCTCTCTAGCCAGCTCCTAACGGCTTCTTCCTACTTTTGTACTTaGGAGACCAGTATAAGGATGTCAGTTTCTAATGTAGTTAATTTT | + |
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Preference number: 1 (lower is better) Translates to: SLSSQLLTASSYFCT*ETSIRMSVSNVVNF Trigger: AAAATTAACTACATTAGAAACTGACATCCTTATACTGGTCTCCCAAGTACAAAAGTAGGAAGAAGCCGTTAGGAGCTGGCTAGAGAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR CCA 90 bp | TGTAGTATTCTTGGAGAAGCACTGAGTACAGTAGGTTTATTTAGCTaGAACTACTATTTTATAGGAACACTGGAGAGTTCCATGGCAAAA | + |
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Preference number: 1 (lower is better) Translates to: CSILGEALSTVGLFS*NYYFIGTLESSMAK Trigger: TTTTGCCATGGAACTCTCCAGTGTTCCTATAAAATAGTAGTTCCAGCTAAATAAACCTACTGTACTCAGTGCTTCTCCAAGAATACTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR CCA 90 bp | CTCAGCCTTATAGGTGCTGGTATTAGAAGTATGAATGACCATGCATaGCAATATCAACATATACTTCCAAATTCATACAGAGCCTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: LSLIGAGIRSMNDHA*QYQHILPNSYRALR Trigger: TCTTAAGGCTCTGTATGAATTTGGAAGTATATGTTGATATTGCCATGCATGGTCATTCATACTTCTAATACCAGCACCTATAAGGCTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR TCA 90 bp | ACACAGAAAAACACAGTATCAAAACAAGACAATTCCCAGTATGGATaGGAAACTGATCACAGTAATTCTGTGCTATGTTGCATCATTAGA | + |
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Preference number: 1 (lower is better) Translates to: TQKNTVSKQDNSQYG*ETDHSNSVLCCIIR Trigger: TCTAATGATGCAACATAGCACAGAATTACTGTGATCAGTTTCTCATCCATACTGGGAATTGTCTTGTTTTGATACTGTGTTTTTCTGTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTTGCAGAACATCTGCAGGTGTGCGCCGCTCTTCTGTCCTACTCTTTCTGCAGAGGACAATTCTCTaGACTCAGTTCTCTGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: KACRTSAGVRRSSVLLFLQRTIL*TQFSGS Trigger: GGAGCCAGAGAACTGAGTCCAGAGAATTGTCCTCTG...CAGAAAGAGTAGGACAGAAGAGCGGCGCACACCTGCAGATGTTCTGCAAGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR GCA 90 bp | TGTTACTTGAAGCCATCCACAAAAGAGACCCACAAAGTACCCAGTGTTAAGCCCGAGACTAGACAGGCCTaGTGTATCCACTGCCAGCGC | + |
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Preference number: 2 (lower is better) Translates to: CYLKPSTKETHKVPSVKPETRQA*CIHCQR Trigger: GCGCTGGCAGTGGATACAGCAGGCCTGTCTAGTCTC...GGGCTTAACACTGGGTACTTTGTGGGTCTCTTTTGTGGATGGCTTCAAGTAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTTGCAGAACATCTGCAGGTGTGCGCCGCTCTTCTGTCCTACTCTTTCTGCGAATGGGAGATGAATaGACAGACAAGAGCCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: KACRTSAGVRRSSVLLFLRMGDE*TDKSPL Trigger: TAAAGGGCTCTTGTCTGTTCATTCATCTCCCATTCG...CAGAAAGAGTAGGACAGAAGAGCGGCGCACACCTGCAGATGTTCTGCAAGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR TCA 90 bp | GTTTCATGCAATGGTAGGCAAGATGTAAAAGGCCACCCAGACCCATACGTTTCTTCCAAGCATCTGCTGTaGACAGCTGGAGAAAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: VSCNGRQDVKGHPDPYVSSKHLL*TAGESS Trigger: ACTGCTTTCTCCAGCTGTTCACAGCAGATGCTTGGA...AGAAACGTATGGGTCTGGGTGGCCTTTTACATCTTGCCTACCATTGCATGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAGTGAGCAATAACTCACTCTCTAGCCCAGTTCCAAACTCAAACAACCTTCACTGGAGAGTTCCATaGCAAAACAGCCCAGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: LRVSNNSLSSPVPNSNNLHWRVP*QNSPGL Trigger: TAGCCCTGGGCTGTTTTGCCATGGAACTCTCCAGTG...AAGGTTGTTTGAGTTTGGAACTGGGCTAGAGAGTGAGTTATTGCTCACTCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR GCA 90 bp | AAGGCTTGCAGAACATCTGCAGGTGTGCGCCGCTCTTCTGTCCTACTCTTTCTGTCAGGAGGTTTAAACTaGTGGTTTCAAACAATGGAT | + |
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Preference number: 2 (lower is better) Translates to: KACRTSAGVRRSSVLLFLSGGLN*WFQTMD Trigger: ATCCATTGTTTGAAACCAGCAGTTTAAACCTCCTGA...CAGAAAGAGTAGGACAGAAGAGCGGCGCACACCTGCAGATGTTCTGCAAGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR GCA 90 bp | ATCATCATCGCAATACAGTCCCCCAGTCAGTCTGTACATCCAAATGCATCCAGGTTCACATACACCCCATaGCTCCAATCAAACTGTACA | + |
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Preference number: 2 (lower is better) Translates to: IIIAIQSPSQSVHPNASRFTYTP*LQSNCT Trigger: TGTACAGTTTGATTGGAGGCATGGGGTGTATGTGAA...CCTGGATGCATTTGGATGTACAGACTGACTGGGGGACTGTATTGCGATGATGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR CCA 90 bp | GTTTCATGCAATGGTAGGCAAGATGTAAAAGGCCACCCAGACCCATACGTTTCTTCTGCTGTGAACAGCTaGAGAAAGCAGTCAGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: VSCNGRQDVKGHPDPYVSSAVNS*RKQSVR Trigger: TCTTACTGACTGCTTTCTCCAGCTGTTCACAGCAGA...AGAAACGTATGGGTCTGGGTGGCCTTTTACATCTTGCCTACCATTGCATGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGATTAACTTGGGGGAGGGAGGGGAAGATAATCACTTTAGACATTCAGTTTACAATCCTTCCCAGTaGCCACATGCTTTAAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: WKINLGEGGEDNHFRHSVYNPSQ*PHALSV Trigger: GACACTTAAAGCATGTGGTCACTGGGAAGGATTGTA...AACTGAATGTCTAAAGTGATTATCTTCCCCTCCCTCCCCCAAGTTAATCTTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAGTGAGCAATAACTCACTCTCTAGCCCAGTTCCAAACTCAAACAACCTTGAATCCAAGGGTTTTTaGATGTTAGACAAGCACTCT | + |
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Preference number: 2 (lower is better) Translates to: LRVSNNSLSSPVPNSNNLESKGF*MLDKHS Trigger: AGAGTGCTTGTCTAACATGCAAAAACCCTTGGATTC...AAGGTTGTTTGAGTTTGGAACTGGGCTAGAGAGTGAGTTATTGCTCACTCTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR CCA 90 bp | GTTTCATGCAATGGTAGGCAAGATGTAAAAGGCCACCCAGACCCATACGTTTCTTTTAATGAGCTAGTTTaGGGAAGATTAGCCATGTAC | + |
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Preference number: 2 (lower is better) Translates to: VSCNGRQDVKGHPDPYVSFNELV*GRLAMY Trigger: GTACATGGCTAATCTTCCCCAAACTAGCTCATTAAA...AGAAACGTATGGGTCTGGGTGGCCTTTTACATCTTGCCTACCATTGCATGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGTCTTGCTATATATGTAGGCCTGAGTGTCCTTGAATTCTGGAACCTTCTGAATTCCCAGTATGGATaGGAAACTGATCACAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: HSLAIYVGLSVLEFWNLLNSQYG*ETDHSN Trigger: ATTACTGTGATCAGTTTCTCATCCATACTGGGAATT...CAGAAGGTTCCAGAATTCAAGGACACTCAGGCCTACATATATAGCAAGACTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR CCA 90 bp | CTGGATCTGAGTTTGGGGGTTGTAATGAGTGTCCTTTGTATTTCGAAAGTATGCACCCAAAAACAAAGATaGAAGATTAACTTGGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LDLSLGVVMSVLCISKVCTQKQR*KINLGE Trigger: CTCCCCCAAGTTAATCTTCCATCTTTGTTTTTGGGT...GCATACTTTCGAAATACAAAGGACACTCATTACAACCCCCAAACTCAGATCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR CAA 90 bp | TGGTGCTGGGATTATAGGCATAAACTATCATACCTGGATCTGAGTTaGGGGGTTGTAATGAGTGTCCTTTGTATTTCGAAAGTATGCTTT | + |
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Preference number: 2 (lower is better) Translates to: WCWDYRHKLSYLDLS*GVVMSVLCISKVCF Trigger: AAAGCATACTTTCGAAATACAAAGGACACTCATTACAACCCCCAAACTCAGATCCAGGTATGATAGTTTATGCCTATAATCCCAGCACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR TCA 90 bp | CTGGATCTGAGTTTGGGGGTTGTAATGAGTGTCCTTTGTATTTCGAAAGTATGCATGACACACACATTTTaGAGAAACCCCAATGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: LDLSLGVVMSVLCISKVCMTHTF*RNPNVS Trigger: TGAAACATTGGGGTTTCTTCAAAATGTGTGTGTCAT...GCATACTTTCGAAATACAAAGGACACTCATTACAACCCCCAAACTCAGATCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR CCA 90 bp | CTGGATCTGAGTTTGGGGGTTGTAATGAGTGTCCTTTGTATTTCGAAAGTATGCTTCACTGAAGAGAGCTaGTCTATTTCATCTTTAATG | + |
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Preference number: 2 (lower is better) Translates to: LDLSLGVVMSVLCISKVCFTEES*SISSLM Trigger: CATTAAAGATGAAATAGACCAGCTCTCTTCAGTGAA...GCATACTTTCGAAATACAAAGGACACTCATTACAACCCCCAAACTCAGATCCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR TCA 90 bp | AATTGTATGTCACAATGTCACAGAAAGGAAATACTTATACTGTACGTAGCCAAGATTTGTCCTCTTCACTaGAGAGAGCTGGTCTATTTC | + |
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Preference number: 2 (lower is better) Translates to: NCMSQCHRKEILILYVAKICPLH*RELVYF Trigger: GAAATAGACCAGCTCTCTTCAGTGAAGAGGACAAAT...CTTGGCTACGTACAGTATAAGTATTTCCTTTCTGTGACATTGTGACATACAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR GCA 90 bp | TGTAACCCTGAATATATGAGTCTCATGTTAAGGTTTAACACAGCTCATGAGCTGTATTCTTCTTTTCTGTaGAAGTTCCACCCTCATGAA | + |
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Preference number: 2 (lower is better) Translates to: CNPEYMSLMLRFNTAHELYSSFL*KFHPHE Trigger: TTCATGAGGGTGGAACTTGCACAGAAAAGAAGAATA...CAGCTCATGAGCTGTGTTAAACCTTAACATGAGACTCATATATTCAGGGTTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR TCA 90 bp | ATGAGGTTGATCCAAACTAAGATTAAGATGACAGCAGATATATTCCATGCAGAACTGGTATTAGAAGTATaGATGACCATGCATGGCAAT | + |
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Preference number: 2 (lower is better) Translates to: MRLIQTKIKMTADIFHAELVLEV*MTMHGN Trigger: ATTGCCATGCATGGTCATTCATACTTCTAATACCAG...TTCTGCATGGAATATATCTGCTGTCATCTTAATCTTAGTTTGGATCAACCTCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR GCA 90 bp | ATGAGGTTGATCCAAACTAAGATTAAGATGACAGCAGATATATTCCATGCAGAACATAGAAACACCAAGTaGCAGGAAGATTTTTCTACT | + |
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Preference number: 2 (lower is better) Translates to: MRLIQTKIKMTADIFHAEHRNTK*QEDFST Trigger: AGTAGAAAAATCTTCCTGGCACTTGGTGTTTCTATG...TTCTGCATGGAATATATCTGCTGTCATCTTAATCTTAGTTTGGATCAACCTCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| 3UTR-3UTR CCA 90 bp | AACCCAGGTTCAATATATAAAAATGTCCCACAACACATCAACAATGGCAGTAAATTATTTAATTATTATTaGGTGCGTCACGTGGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: NPGSIYKNVPQHINNGSKLFNYY*VRHVGY Trigger: GTAGCCCACGTGACGCACCCAATAATAATTAAATAA...TTTACTGCCATTGTTGATGTGTTGTGGGACATTTTTATATATTGAACCTGGGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR-3UTR CCA 90 bp | AATTGTATGTCACAATGTCACAGAAAGGAAATACTTATACTGTACGTAGCCAAGGGAGGTTTAAACTGCTaGTTTCAAACAATGGATAAG | + |
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Preference number: 2 (lower is better) Translates to: NCMSQCHRKEILILYVAKGGLNC*FQTMDK Trigger: CTTATCCATTGTTTGAAACCAGCAGTTTAAACCTCC...CTTGGCTACGTACAGTATAAGTATTTCCTTTCTGTGACATTGTGACATACAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR CCA 72 bp | ATTCTTCTAAGGGCCTGGGCTTCTCCACAGCCACTGTaGCCCGGGAGCCTACACAGCACACCAGCACACTCG | + |
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Preference number: 3 (lower is better) Translates to: ILLRAWASPQPL*PGSLHSTPAHS Trigger: CGAGTGTGCTGGTGTGCTGTGTAGGCTCCCGGGCCACAGTGGCTGTGGAGAAGCCCAGGCCCTTAGAAGAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR GCA 72 bp | CCACTGCCAGCGCCTGTGCTGCCTTCCGATGCTGCATaGGCAGCAACGTCCCAGAAGTGTCTACACAGAACT | + |
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Preference number: 3 (lower is better) Translates to: PLPAPVLPSDAA*AATSQKCLHRT Trigger: AGTTCTGTGTAGACACTTCTGGGACGTTGCTGCGCATGCAGCATCGGAAGGCAGCACAGGCGCTGGCAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR GCA 72 bp | GTATCCACTGCCAGCGCCTGTGCTGCCTTCCGATGCTaGATGCGCAGCAACGTCCCAGAAGTGTCTACACAG | + |
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Preference number: 3 (lower is better) Translates to: VSTASACAAFRC*MRSNVPEVSTQ Trigger: CTGTGTAGACACTTCTGGGACGTTGCTGCGCATGCAGCATCGGAAGGCAGCACAGGCGCTGGCAGTGGATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR GCA 72 bp | GCTGTATCCACTGCCAGCGCCTGTGCTGCCTTCCGATaGTGCATGCGCAGCAACGTCCCAGAAGTGTCTACA | + |
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Preference number: 3 (lower is better) Translates to: AVSTASACAAFR*CMRSNVPEVST Trigger: TGTAGACACTTCTGGGACGTTGCTGCGCATGCAGCATCGGAAGGCAGCACAGGCGCTGGCAGTGGATACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR CCA 72 bp | GTACAGGTGGCAAATACAGTGATTCTTCTAAGGGCCTaGGCTTCTCCACAGCCACTGTGGCCCGGGAGCCTA | + |
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Preference number: 3 (lower is better) Translates to: VQVANTVILLRA*ASPQPLWPGSL Trigger: TAGGCTCCCGGGCCACAGTGGCTGTGGAGAAGCCCAGGCCCTTAGAAGAATCACTGTATTTGCCACCTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR GCA 72 bp | GCATGCTCATCTGGACCGCAAGGCTTGCAGAACATCTaGAGGTGTGCGCCGCTCTTCTGTCCTACTCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: ACSSGPQGLQNI*RCAPLFCPTLS Trigger: AGAAAGAGTAGGACAGAAGAGCGGCGCACACCTGCAGATGTTCTGCAAGCCTTGCGGTCCAGATGAGCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR CCA 72 bp | AAAACAGCCCAGGGCTACAATCAGCCAAACCCACTGTaGGAGACTAGACAGGCCTGCTGTATCCACTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: KTAQGYNQPNPL*ETRQACCIHCQ Trigger: CTGGCAGTGGATACAGCAGGCCTGTCTAGTCTCCCACAGTGGGTTTGGCTGATTGTAGCCCTGGGCTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR CCA 72 bp | GCAGCAACTGCCTTTAGAAAGAGGCCCCATCGTCAGTaGAAACACGCAAGCATAGCAGCCGTGAGGTACAGG | + |
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Preference number: 3 (lower is better) Translates to: AATAFRKRPHRQ*KHASIAAVRYR Trigger: CCTGTACCTCACGGCTGCTATGCTTGCGTGTTTCCACTGACGATGGGGCCTCTTTCTAAAGGCAGTTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR CCA 72 bp | GAACGCTACATGAGGAAACCTTCCGGCATGCTCATCTaGACCGCAAGGCTTGCAGAACATCTGCAGGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ERYMRKPSGMLI*TARLAEHLQVC Trigger: GCACACCTGCAGATGTTCTGCAAGCCTTGCGGTCCAGATGAGCATGCCGGAAGGTTTCCTCATGTAGCGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR TCA 72 bp | TGCTCTGTCTCGCCCAGTTTATACAGTGTGAAGGACTaGACCCAGGCTCTGTGTAAGCTAGGCACCCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CSVSPSLYSVKD*TQALCKLGTPA Trigger: TGCTGGGGTGCCTAGCTTACACAGAGCCTGGGTTCAGTCCTTCACACTGTATAAACTGGGCGAGACAGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR GCA 72 bp | ATCTGGACCGCAAGGCTTGCAGAACATCTGCAGGTGTaGGCCGCTCTTCTGTCCTACTCTTTCTGCAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: IWTARLAEHLQV*AALLSYSFCKS Trigger: AGATTTGCAGAAAGAGTAGGACAGAAGAGCGGCGCACACCTGCAGATGTTCTGCAAGCCTTGCGGTCCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCTTGCAGAACATCTGCAGGTGTGCGCCGCTCTTCTGTCCTACTCTTTCTGAGATGGAAGATTAACTaGGGGGAGGGAGGGGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KACRTSAGVRRSSVLLFLRWKIN*GEGGED Trigger: ATCTTCCCCTCCCTCCCCCAAGTTAATCTTCCATCT...CAGAAAGAGTAGGACAGAAGAGCGGCGCACACCTGCAGATGTTCTGCAAGCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR TCA 72 bp | CTACTTTGCACTTCTCATCTTCCTGTCTCTACCTGCTaGATGCTAGGACTGCAAACATGCTCTGTCTCGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LLCTSHLPVSTC*MLGLQTCSVSP Trigger: GGGCGAGACAGAGCATGTTTGCAGTCCTAGCATTCAGCAGGTAGAGACAGGAAGATGAGAAGTGCAAAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR TCA 72 bp | CCTGCTGACTGTCCATGGAGGTTTGTAGGTTCAAGGTaGGCACAGATGAGAAGCCCAAATGAGACTGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PADCPWRFVGSR*AQMRSPNETGF Trigger: AAAACCAGTCTCATTTGGGCTTCTCATCTGTGCTCACCTTGAACCTACAAACCTCCATGGACAGTCAGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCATGCAATGGTAGGCAAGATGTAAAAGGCCACCCAGACCCATACGTTTCTGTCACAAGGGAAGCTTaGGGGATTGAGAAAAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: VSCNGRQDVKGHPDPYVSVTREA*GIEKSK Trigger: CTTGCTTTTCTCAATCCCCAAAGCTTCCCTTGTGAC...AGAAACGTATGGGTCTGGGTGGCCTTTTACATCTTGCCTACCATTGCATGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR GCA 72 bp | CTGCAGGTGTGCGCCGCTCTTCTGTCCTACTCTTTCTaGAAATCTAGTCTAGTCTTCAACACACTTTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LQVCAALLSYSF*KSSLVFNTLSN Trigger: GTTTGAAAGTGTGTTGAAGACTAGACTAGATTTGCAGAAAGAGTAGGACAGAAGAGCGGCGCACACCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCATGCAATGGTAGGCAAGATGTAAAAGGCCACCCAGACCCATACGTTTCTTTCGAACAAAGGCACTaGTTCCCATGTAACCGATTG | + |
|
Preference number: 3 (lower is better) Translates to: VSCNGRQDVKGHPDPYVSFEQRH*FPCNRL Trigger: CAATCGGTTACATGGGAACAAGTGCCTTTGTTCGAA...AGAAACGTATGGGTCTGGGTGGCCTTTTACATCTTGCCTACCATTGCATGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR CCA 72 bp | CTTGCTATATATGTAGGCCTGAGTGTCCTTGAATTCTaGAACCTTCTGCCTCAGCCTTATAGGTGCTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LAIYVGLSVLEF*NLLPQPYRCWY Trigger: ATACCAGCACCTATAAGGCTGAGGCAGAAGGTTCCAGAATTCAAGGACACTCAGGCCTACATATATAGCAAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR TCA 72 bp | CCAGAATTTCACAATCAGCCTCTTTTATGGCAACTATaGCATATCTTTTCGCCTTTGCACACCGCGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: PEFHNQPLLWQL*HIFSPLHTAHT Trigger: TGTGTGCGCGGTGTGCAAAGGCGAAAAGATATGTCATAGTTGCCATAAAAGAGGCTGATTGTGAAATTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR TCA 72 bp | TGTAGGTTCAAGGTGAGCACAGATGAGAAGCCCAAATaGGACTGGTTTTACAGGAAAACTCTGCTGTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CRFKVSTDEKPK*DWFYRKTLLFF Trigger: GAAGAACAGCAGAGTTTTCCTGTAAAACCAGTCTCATTTGGGCTTCTCATCTGTGCTCACCTTGAACCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAGTGAGCAATAACTCACTCTCTAGCCCAGTTCCAAACTCAAACAACCTTCATACTGTATCTTCTTaGGATGGAACTGAGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LRVSNNSLSSPVPNSNNLHTVSS*DGTEKA Trigger: AGCTTTCTCAGTTCCATCCAAAGAAGATACAGTATG...AAGGTTGTTTGAGTTTGGAACTGGGCTAGAGAGTGAGTTATTGCTCACTCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR TCA 72 bp | ATGTTAGACAAGCACTCTGAGCTACACCTACAACCATaGACCAATCTGTATTCACCAAACTGGCAAATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: MLDKHSELHLQP*TNLYSPNWQIS Trigger: TGAGATTTGCCAGTTTGGTGAATACAGATTGGTTCATGGTTGTAGGTGTAGCTCAGAGTGCTTGTCTAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR CCA 72 bp | GTTTTTATTTATTTAATTATTATTGGGTGCGTCACGTaGGCTACCGCACATGGAGGTCAGAGGACAATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VFIYLIIIGCVT*ATAHGGQRTIL Trigger: GAGAATTGTCCTCTGACCTCCATGTGCGGTAGCCCACGTGACGCACCCAATAATAATTAAATAAATAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR CCA 72 bp | GAAAACTCTGCTGTTCTTCGAGAACCTTTTTCCTCCTaGCATTTAGCTCCTACTTATACCACTTACACATGT | + |
|
Preference number: 3 (lower is better) Translates to: ENSAVLREPFSS*HLAPTYTTYTC Trigger: ACATGTGTAAGTGGTATAAGTAGGAGCTAAATGCCAGGAGGAAAAAGGTTCTCGAAGAACAGCAGAGTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR CCA 72 bp | CTTGGAGAAGCACTGAGTACAGTAGGTTTATTTAGCTaGAACTACTATTTTATAGGAACACTGGAGAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LGEALSTVGLFS*NYYFIGTLESS Trigger: GGAACTCTCCAGTGTTCCTATAAAATAGTAGTTCCAGCTAAATAAACCTACTGTACTCAGTGCTTCTCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR GCA 72 bp | CTTCTAACAGTACTAGAAATTGAATCCAAGGGTTTTTaGATGTTAGACAAGCACTCTGAGCTACACCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: LLTVLEIESKGF*MLDKHSELHLQ Trigger: TTGTAGGTGTAGCTCAGAGTGCTTGTCTAACATGCAAAAACCCTTGGATTCAATTTCTAGTACTGTTAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR TCA 72 bp | AACACAGTATCAAAACAAGACAATTCCCAGTATGGATaGGAAACTGATCACAGTAATTCTGTGCTATGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: NTVSKQDNSQYG*ETDHSNSVLCC Trigger: GCAACATAGCACAGAATTACTGTGATCAGTTTCTCATCCATACTGGGAATTGTCTTGTTTTGATACTGTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR GCA 72 bp | AGAGCGCCATGTTCTCTGACAACCCTACACTTGACCTaGATGATTACGAAAAACATTTTATTAAGACAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RAPCSLTTLHLT*MITKNILLRQK Trigger: TTTTTGTCTTAATAAAATGTTTTTCGTAATCATGCAGGTCAAGTGTAGGGTTGTCAGAGAACATGGCGCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR-3UTR CAA 90 bp | CTGTACAGTAGATTGTATTATAGAGAGTGCACCTCTACTTTCATACTGTATCTTACTCCTGAATTCATTTaGGTGTTCCTGATAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LYSRLYYRECTSTFILYLTPEFI*VFLIKQ Trigger: TTGCTTTATCAGGAACACCAAAATGAATTCAGGAGT...AAGATACAGTATGAAAGTAGAGGTGCACTCTCTATAATACAATCTACTGTACAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR TCA 72 bp | AATCTAACTAGTCACTCTTCTAACAGTACTAGAAATTaGATCCAAGGGTTTTTGCATGTTAGACAAGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: NLTSHSSNSTRN*IQGFLHVRQAL Trigger: GAGTGCTTGTCTAACATGCAAAAACCCTTGGATTCAATTTCTAGTACTGTTAGAAGAGTGACTAGTTAGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR GCA 72 bp | CCCAGTATGGATGAGAAACTGATCACAGTAATTCTGTaGTATGTTGCATCATTAGAATGGATACAAAAATTG | + |
|
Preference number: 3 (lower is better) Translates to: PSMDEKLITVIL*YVASLEWIQKL Trigger: CAATTTTTGTATCCATTCTAATGATGCAACATAGCACAGAATTACTGTGATCAGTTTCTCATCCATACTGGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| CDS-3UTR CCA 90 bp | CCCCAGTCAGTCTGTACATCCAAATGCATCCAGGAACCTACACCTACGCGACATCACGACAAGGGAAGTTaGGCTGACCCGACAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQSVCTSKCIQEPTPTRHHDKGS*ADPTDF Trigger: GAAATCTGTCGGGTCAGCCCAACTTCCCTTGTCGTG...ATGTCGCGTAGGTGTAGGTTCCTGGATGCATTTGGATGTACAGACTGACTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCCAGTCAGTCTGTACATCCAAATGCATCCAGGAACCTACACCTACGCGACGACACAGCAAATATCTaGCATCCAGAGCCAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSQSVHPNASRNLHLRDDTANI*HPEPMR Trigger: CCTCATTGGCTCTGGATGTCAGATATTTGCTGTGTC...GTCGCGTAGGTGTAGGTTCCTGGATGCATTTGGATGTACAGACTGACTGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR TCA 90 bp | GTTTCATGCAATGGTAGGCAAGATGTAAAAGGCCACCCAGACCCATACGTTTCTCAAGGGAAGTTGGGCTaGCCCGACAGATTTCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: VSCNGRQDVKGHPDPYVSQGKLG*PDRFRP Trigger: GGGTCGAAATCTGTCGGGTCAGCCCAACTTCCCTTG...AGAAACGTATGGGTCTGGGTGGCCTTTTACATCTTGCCTACCATTGCATGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAGTCAGTCTGTACATCCAAATGCATCCAGGAACCTACACCTACGCGACATACATCTCCATGCACCTaGTTCCAGCCATACTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQSVCTSKCIQEPTPTRHTSPCT*FQPYSS Trigger: AGACGAGTATGGCTGGAAGCAGGTGCATGGAGATGT...ATGTCGCGTAGGTGTAGGTTCCTGGATGCATTTGGATGTACAGACTGACTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR TCA 90 bp | AACCCCAATGTTTCATGCAATGGTAGGCAAGATGTAAAAGGCCACCCAGACCCAGGTGACTTGACGGTCTaGACACATCTCCATGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NPNVSCNGRQDVKGHPDPGDLTV*THLHAP Trigger: AGGTGCATGGAGATGTGTTCAGACCGTCAAGTCACC...TGGGTCTGGGTGGCCTTTTACATCTTGCCTACCATTGCATGAAACATTGGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAGTCAGTCTGTACATCCAAATGCATCCAGGAACCTACACCTACGCGACATAAAGTACCCGTTCACTaGCGATGTAGCAGCATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PQSVCTSKCIQEPTPTRHKVPVH*RCSSID Trigger: GTCTATGCTGCTACATCGCCAGTGAACGGGTACTTT...ATGTCGCGTAGGTGTAGGTTCCTGGATGCATTTGGATGTACAGACTGACTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR CCA 90 bp | ACCCATACGTTTCTACACCAATCATCATCGCAATACAGTCCCCCAGTCAGTCTGGCCACACACCATAGCTaGGATAAGGAATGCCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: THTFLHQSSSQYSPPVSLATHHS*DKECPD Trigger: ATCGGGGCATTCCTTATCCCAGCTATGGTGTGTGGC...CAGACTGACTGGGGGACTGTATTGCGATGATGATTGGTGTAGAAACGTATGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR TCA 90 bp | TGGAAGATTAACTTGGGGGAGGGAGGGGAAGATAATCACTTTAGACATTCAGTTCAAGGGAAGTTGGGCTaGCCCGACAGATTTCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: WKINLGEGGEDNHFRHSVQGKLG*PDRFRP Trigger: GGGTCGAAATCTGTCGGGTCAGCCCAACTTCCCTTG...AACTGAATGTCTAAAGTGATTATCTTCCCCTCCCTCCCCCAAGTTAATCTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGTGAGCAATAACTCACTCTCTAGCCCAGTTCCAAACTCAAACAACCTTCAAATATGGCTGTGCTaGGCATTGACCCCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRVSNNSLSSPVPNSNNLQIWLC*ALTPSL Trigger: CAGAGAGGGGGTCAATGCTCAGCACAGCCATATTTG...AAGGTTGTTTGAGTTTGGAACTGGGCTAGAGAGTGAGTTATTGCTCACTCTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| CDS-3UTR TCA 90 bp | CTGGATCTGAGTTTGGGGGTTGTAATGAGTGTCCTTTGTATTTCGAAAGTATGCGGTGACTTGACGGTCTaGACACATCTCCATGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LDLSLGVVMSVLCISKVCGDLTV*THLHAP Trigger: AGGTGCATGGAGATGTGTTCAGACCGTCAAGTCACC...GCATACTTTCGAAATACAAAGGACACTCATTACAACCCCCAAACTCAGATCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| CDS-3UTR TCA 90 bp | CTGGATCTGAGTTTGGGGGTTGTAATGAGTGTCCTTTGTATTTCGAAAGTATGCGACATCCAGAGCCAATaGGGGAGGAGAAGATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LDLSLGVVMSVLCISKVCDIQSQ*GRRRSE Trigger: CTCTGATCTTCTCCTCCCTCATTGGCTCTGGATGTC...GCATACTTTCGAAATACAAAGGACACTCATTACAACCCCCAAACTCAGATCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| CDS-3UTR TCA 90 bp | TGTTACTTGAAGCCATCCACAAAAGAGACCCACAAAGTACCCAGTGTTAAGCCCCCAGCACCAGCATCATaGAGCCATAGACATAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CYLKPSTKETHKVPSVKPPAPAS*SHRHSR Trigger: TCTACTATGTCTATGGCTTCATGATGCTGGTGCTGG...GGGCTTAACACTGGGTACTTTGTGGGTCTCTTTTGTGGATGGCTTCAAGTAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR GCA 90 bp | AACCCCAATGTTTCATGCAATGGTAGGCAAGATGTAAAAGGCCACCCAGACCCAGCCCCGATAAACATCTaGTTTATCCATCTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NPNVSCNGRQDVKGHPDPAPINI*FIHLLP Trigger: AGGAAGGAGATGGATAAAGCAGATGTTTATCGGGGC...TGGGTCTGGGTGGCCTTTTACATCTTGCCTACCATTGCATGAAACATTGGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR GCA 90 bp | ATCATCATCGCAATACAGTCCCCCAGTCAGTCTGTACATCCAAATGCATCCAGGAGCTGGGATAAGGAATaGCCCGATAAACATCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IIIAIQSPSQSVHPNASRSWDKE*PDKHLL Trigger: AAGCAGATGTTTATCGGGGCATTCCTTATCCCAGCT...CCTGGATGCATTTGGATGTACAGACTGACTGGGGGACTGTATTGCGATGATGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR GCA 90 bp | GTTTCATGCAATGGTAGGCAAGATGTAAAAGGCCACCCAGACCCATACGTTTCTGCCCCGATAAACATCTaGTTTATCCATCTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSCNGRQDVKGHPDPYVSAPINI*FIHLLP Trigger: AGGAAGGAGATGGATAAAGCAGATGTTTATCGGGGC...AGAAACGTATGGGTCTGGGTGGCCTTTTACATCTTGCCTACCATTGCATGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR TCA 90 bp | ACCCATACGTTTCTACACCAATCATCATCGCAATACAGTCCCCCAGTCAGTCTGTCTAATTCAACTCCTTaGAGTGCTTCTCCCAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: THTFLHQSSSQYSPPVSLSNSTP*SASPKV Trigger: AACTTTGGGAGAAGCACTTCAAGGAGTTGAATTAGA...CAGACTGACTGGGGGACTGTATTGCGATGATGATTGGTGTAGAAACGTATGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR GCA 90 bp | ACCCACAAAGTACCCAGTGTTAAGCCCAAATCTCTTCTTGCGATTATTCTTCTTACATCTCCATGCACCTaGTTCCAGCCATACTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: THKVPSVKPKSLLAIILLTSPCT*FQPYSS Trigger: AGACGAGTATGGCTGGAAGCAGGTGCATGGAGATGT...AAGAAGAATAATCGCAAGAAGAGATTTGGGCTTAACACTGGGTACTTTGTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR GCA 90 bp | ACCCACAAAGTACCCAGTGTTAAGCCCAAATCTCTTCTTGCGATTATTCTTCTTCTGAACACATCTCCATaGACCTGCTTCCAGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: THKVPSVKPKSLLAIILLLNTSP*TCFQPY Trigger: GTATGGCTGGAAGCAGGTGCATGGAGATGTGTTCAG...AAGAAGAATAATCGCAAGAAGAGATTTGGGCTTAACACTGGGTACTTTGTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTATTCACCAAACTGGCAAATCTCAAGGTAACAAAAGAGCTGAGGGAAGGCAGCTGGGATAAGGAATaGCCCGATAAACATCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVFTKLANLKVTKELREGSWDKE*PDKHLL Trigger: AAGCAGATGTTTATCGGGGCATTCCTTATCCCAGCT...GCCTTCCCTCAGCTCTTTTGTTACCTTGAGATTTGCCAGTTTGGTGAATACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| CDS-3UTR GCA 90 bp | TGTTACTTGAAGCCATCCACAAAAGAGACCCACAAAGTACCCAGTGTTAAGCCCAAAGTTGATGAAGAATaGAGTGCCACACACCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: CYLKPSTKETHKVPSVKPKVDEE*SATHHS Trigger: GCTATGGTGTGTGGCACTGCATTCTTCATCAACTTT...GGGCTTAACACTGGGTACTTTGTGGGTCTCTTTTGTGGATGGCTTCAAGTAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGATTAACTTGGGGGAGGGAGGGGAAGATAATCACTTTAGACATTCAGTTAAAGTACCCGTTCACTaGCGATGTAGCAGCATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WKINLGEGGEDNHFRHSVKVPVH*RCSSID Trigger: GTCTATGCTGCTACATCGCCAGTGAACGGGTACTTT...AACTGAATGTCTAAAGTGATTATCTTCCCCTCCCTCCCCCAAGTTAATCTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR CCA 90 bp | TGTAACCCTGAATATATGAGTCTCATGTTAAGGTTTAACACAGCTCATGAGCTGCACGACAAGGGAAGTTaGGCTGACCCGACAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CNPEYMSLMLRFNTAHELHDKGS*ADPTDF Trigger: GAAATCTGTCGGGTCAGCCCAACTTCCCTTGTCGTG...CAGCTCATGAGCTGTGTTAAACCTTAACATGAGACTCATATATTCAGGGTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR CAA 72 bp | CCCACAAAGTACCCAGTGTTAAGCCCAAATCTCTTCTaGCGATTATTCTTCTTTTCTGTGCAAGTTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: PTKYPVLSPNLF*RLFFFSVQVPP Trigger: GGGTGGAACTTGCACAGAAAAGAAGAATAATCGCAAGAAGAGATTTGGGCTTAACACTGGGTACTTTGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| 3UTR CAA 72 bp | GATGGAATGCAGTGTGCAGGTTTCTACAAAAGGCTTTaGCCCCTAGAATTCATGTATAGAAGCCCTTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DGMQCAGFYKRL*PLEFMYRSPSV Trigger: TACCGAAGGGCTTCTATACATGAATTCTAGGGGCAAAAGCCTTTTGTAGAAACCTGCACACTGCATTCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| 3UTR CAA 72 bp | CCTAAGCTGATGATGGGGATAACCATAAACTGTACCTaGCCTAGTCCACCAGAATTTCACAATCAGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PKLMMGITINCT*PSPPEFHNQPL Trigger: AAGAGGCTGATTGTGAAATTCTGGTGGACTAGGCAAGGTACAGTTTATGGTTATCCCCATCATCAGCTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| CDS-3UTR CCA 90 bp | ACCCATACGTTTCTACACCAATCATCATCGCAATACAGTCCCCCAGTCAGTCTGCTGTATTTTAGTATTTaGAACCAGCTTGACCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: THTFLHQSSSQYSPPVSLLYFSI*NQLDLS Trigger: GGAAAGGTCAAGCTGGTTCCAAATACTAAAATACAG...CAGACTGACTGGGGGACTGTATTGCGATGATGATTGGTGTAGAAACGTATGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| CDS-3UTR TCA 90 bp | ATGAGGTTGATCCAAACTAAGATTAAGATGACAGCAGATATATTCCATGCAGAACAAATATGGCTGTGCTaGGCATTGACCCCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MRLIQTKIKMTADIFHAEQIWLC*ALTPSL Trigger: CAGAGAGGGGGTCAATGCTCAGCACAGCCATATTTG...TTCTGCATGGAATATATCTGCTGTCATCTTAATCTTAGTTTGGATCAACCTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| CDS-3UTR GCA 90 bp | CACAGTCTTGCTATATATGTAGGCCTGAGTGTCCTTGAATTCTGGAACCTTCTGCAATTTCACAGTAAGTaGCTGGCATCACATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSLAIYVGLSVLEFWNLLQFHSK*LASHHL Trigger: AAGATGATGTGATGCCAGGCACTTACTGTGAAATTG...CAGAAGGTTCCAGAATTCAAGGACACTCAGGCCTACATATATAGCAAGACTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| CDS-3UTR CCA 90 bp | CAAGATGTAAAAGGCCACCCAGACCCATACGTTTCTACACCAATCATCATCGCACTGTATTTTAGTATTTaGAACCAGCTTGACCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QDVKGHPDPYVSTPIIIALYFSI*NQLDLS Trigger: GGAAAGGTCAAGCTGGTTCCAAATACTAAAATACAG...TGCGATGATGATTGGTGTAGAAACGTATGGGTCTGGGTGGCCTTTTACATCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| 3UTR CAA 72 bp | CACCCAAGAGCGCCATGTTCTCTGACAACCCTACACTaGACCTGCATGATTACGAAAAACATTTTATTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPRAPCSLTTLH*TCMITKNILLR Trigger: TCTTAATAAAATGTTTTTCGTAATCATGCAGGTCAAGTGTAGGGTTGTCAGAGAACATGGCGCTCTTGGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| CDS-3UTR TCA 90 bp | CTGTACAGTAGATTGTATTATAGAGAGTGCACCTCTACTTTCATACTGTATCTTGACACAGCAAATATCTaGCATCCAGAGCCAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYSRLYYRECTSTFILYLDTANI*HPEPMR Trigger: CCTCATTGGCTCTGGATGTCAGATATTTGCTGTGTC...AAGATACAGTATGAAAGTAGAGGTGCACTCTCTATAATACAATCTACTGTACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| CDS-3UTR TCA 90 bp | AACCCAGGTTCAATATATAAAAATGTCCCACAACACATCAACAATGGCAGTAAACCAGCACCAGCATCATaGAGCCATAGACATAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: NPGSIYKNVPQHINNGSKPAPAS*SHRHSR Trigger: TCTACTATGTCTATGGCTTCATGATGCTGGTGCTGG...TTTACTGCCATTGTTGATGTGTTGTGGGACATTTTTATATATTGAACCTGGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| CDS-3UTR TCA 90 bp | ATGAGGTTGATCCAAACTAAGATTAAGATGACAGCAGATATATTCCATGCAGAACAGGTTTGTCAGGCTTaGGCAGAAAGTACTTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: MRLIQTKIKMTADIFHAEQVCQA*AESTYH Trigger: GTGGTAAGTACTTTCTGCTCAAGCCTGACAAACCTG...TTCTGCATGGAATATATCTGCTGTCATCTTAATCTTAGTTTGGATCAACCTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| CDS-3UTR TCA 90 bp | CAATGGAACCAGAGTCTGCCAGTTACAAATACTAAAATACTCTGCTCTAGAGAATCTAATTCAACTCCTTaGAGTGCTTCTCCCAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QWNQSLPVTNTKILCSRESNSTP*SASPKV Trigger: AACTTTGGGAGAAGCACTTCAAGGAGTTGAATTAGA...TTCTCTAGAGCAGAGTATTTTAGTATTTGTAACTGGCAGACTCTGGTTCCATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| CDS-3UTR GCA 90 bp | TTAAACTGCTGGTTTCAAACAATGGATAAGTGGGGTTCAAAATTTCAGAAAGCAAAAGTTGATGAAGAATaGAGTGCCACACACCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNCWFQTMDKWGSKFQKAKVDEE*SATHHS Trigger: GCTATGGTGTGTGGCACTGCATTCTTCATCAACTTT...TGCTTTCTGAAATTTTGAACCCCACTTATCCATTGTTTGAAACCAGCAGTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR CAA 72 bp | GATTATAGGCATAAACTATCATACCTGGATCTGAGTTaGGGGGTTGTAATGAGTGTCCTTTGTATTTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DYRHKLSYLDLS*GVVMSVLCISK Trigger: TTTCGAAATACAAAGGACACTCATTACAACCCCCAAACTCAGATCCAGGTATGATAGTTTATGCCTATAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| CDS-3UTR GCA 90 bp | CTGTACAGTAGATTGTATTATAGAGAGTGCACCTCTACTTTCATACTGTATCTTCAATTTCACAGTAAGTaGCTGGCATCACATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYSRLYYRECTSTFILYLQFHSK*LASHHL Trigger: AAGATGATGTGATGCCAGGCACTTACTGTGAAATTG...AAGATACAGTATGAAAGTAGAGGTGCACTCTCTATAATACAATCTACTGTACAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR GCA 90 bp | AATTGTATGTCACAATGTCACAGAAAGGAAATACTTATACTGTACGTAGCCAAGATAGTAGATCTTATATaGCCAGAAGGACGTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NCMSQCHRKEILILYVAKIVDLI*PEGRED Trigger: ATCTTCACGTCCTTCTGGGCATATAAGATCTACTAT...CTTGGCTACGTACAGTATAAGTATTTCCTTTCTGTGACATTGTGACATACAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| CDS-3UTR GCA 90 bp | AACCCAGGTTCAATATATAAAAATGTCCCACAACACATCAACAATGGCAGTAAAATAGTAGATCTTATATaGCCAGAAGGACGTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NPGSIYKNVPQHINNGSKIVDLI*PEGRED Trigger: ATCTTCACGTCCTTCTGGGCATATAAGATCTACTAT...TTTACTGCCATTGTTGATGTGTTGTGGGACATTTTTATATATTGAACCTGGGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| 3UTR CAA 72 bp | TTTTTCGAACAAAGGCACTTGTTCCCATGTAACCGATaGCTCCTGAAACAAACAAACAAACAAAAACACATT | + |
|
Preference number: 4 (lower is better) Translates to: FFEQRHLFPCNR*LLKQTNKQKHI Trigger: AATGTGTTTTTGTTTGTTTGTTTGTTTCAGGAGCAATCGGTTACATGGGAACAAGTGCCTTTGTTCGAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| 3UTR CAA 72 bp | TTGCTCCTGAAACAAACAAACAAACAAAAACACATTTaGAAACAAATACAATGGAACCAGAGTCTGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLKQTNKQKHI*KQIQWNQSLPV Trigger: AACTGGCAGACTCTGGTTCCATTGTATTTGTTTCAAAATGTGTTTTTGTTTGTTTGTTTGTTTCAGGAGCAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| CDS TCA 90 bp | CTGACATCCAGAGCCAATGAGGGAGGAGAAGATCAGAGGGTGACTTaGCGGTCTGAACACATCTCCATGCACCTGCTTCCAGCCATACTC | + |
|
Preference number: 5 (lower is better) Translates to: LTSRANEGGEDQRVT*RSEHISMHLLPAIL Trigger: GAGTATGGCTGGAAGCAGGTGCATGGAGATGTGTTCAGACCGTCAAGTCACCCTCTGATCTTCTCCTCCCTCATTGGCTCTGGATGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS TCA 90 bp | GGGATGGGACGAGGCACGGCATTGACACGACAAGGGAAGTTGGGCTaGCCCGACAGATTTCGACCCAGTATTGTACCAACGAGATTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GMGRGTALTRQGKLG*PDRFRPSIVPTRFR Trigger: TCTAAATCTCGTTGGTACAATACTGGGTCGAAATCTGTCGGGTCAGCCCAACTTCCCTTGTCGTGTCAATGCCGTGCCTCGTCCCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| CDS-3UTR CAA 90 bp | TCCCCCAGTCAGTCTGTACATCCAAATGCATCCAGGAACCTACACCTACGCGACCCATCTCCTTCCTCCTaGTCTAGCATACAGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPSQSVHPNASRNLHLRDPSPSS*SSIQTS Trigger: GGAAGTCTGTATGCTAGACAAGGAGGAAGGAGATGG...GTCGCGTAGGTGTAGGTTCCTGGATGCATTTGGATGTACAGACTGACTGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| CDS-3UTR CAA 90 bp | CCCCAGTCAGTCTGTACATCCAAATGCATCCAGGAACCTACACCTACGCGACATAACAAACGGCCACCATaGTTCCAAAAGGAATGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PQSVCTSKCIQEPTPTRHNKRPP*FQKEWL Trigger: GAGCCATTCCTTTTGGAACAATGGTGGCCGTTTGTT...ATGTCGCGTAGGTGTAGGTTCCTGGATGCATTTGGATGTACAGACTGACTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| CDS-3UTR CAA 90 bp | AACCAATCTGTATTCACCAAACTGGCAAATCTCAAGGTAACAAAAGAGCTGAGGGGACGAGGCACGGCATaGACACGACAAGGGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NQSVFTKLANLKVTKELRGRGTA*TRQGKL Trigger: CAACTTCCCTTGTCGTGTCAATGCCGTGCCTCGTCC...CCTCAGCTCTTTTGTTACCTTGAGATTTGCCAGTTTGGTGAATACAGATTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| CDS-3UTR CAA 90 bp | ACCCACAAAGTACCCAGTGTTAAGCCCAAATCTCTTCTTGCGATTATTCTTCTTGGACGAGGCACGGCATaGACACGACAAGGGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: THKVPSVKPKSLLAIILLGRGTA*TRQGKL Trigger: CAACTTCCCTTGTCGTGTCAATGCCGTGCCTCGTCC...AAGAAGAATAATCGCAAGAAGAGATTTGGGCTTAACACTGGGTACTTTGTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCAGTCAGTCTGTACATCCAAATGCATCCAGGAACCTACACCTACGCGACCAACAATACCCCATATaGGTAAGTCATCTATGTACA | + |
|
Preference number: 5 (lower is better) Translates to: SPSQSVHPNASRNLHLRDQQYPI*VSHLCT Trigger: TGTACATAGATGACTTACCAATATGGGGTATTGTTG...GTCGCGTAGGTGTAGGTTCCTGGATGCATTTGGATGTACAGACTGACTGGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| CDS-3UTR CAA 90 bp | CTCAGAGTGAGCAATAACTCACTCTCTAGCCCAGTTCCAAACTCAAACAACCTTCCATCTCCTTCCTCCTaGTCTAGCATACAGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRVSNNSLSSPVPNSNNLPSPSS*SSIQTS Trigger: GGAAGTCTGTATGCTAGACAAGGAGGAAGGAGATGG...AAGGTTGTTTGAGTTTGGAACTGGGCTAGAGAGTGAGTTATTGCTCACTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| CDS-3UTR CAA 90 bp | GTTTCATGCAATGGTAGGCAAGATGTAAAAGGCCACCCAGACCCATACGTTTCTAACAAACGGCCACCATaGTTCCAAAAGGAATGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VSCNGRQDVKGHPDPYVSNKRPP*FQKEWL Trigger: GAGCCATTCCTTTTGGAACAATGGTGGCCGTTTGTT...AGAAACGTATGGGTCTGGGTGGCCTTTTACATCTTGCCTACCATTGCATGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| CDS-3UTR CAA 90 bp | GTTTCATGCAATGGTAGGCAAGATGTAAAAGGCCACCCAGACCCATACGTTTCTTTCCCATGTAACCGATaGCTCCACACATTATCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VSCNGRQDVKGHPDPYVSFPCNR*LHTLSP Trigger: TGGGGATAATGTGTGGAGCAATCGGTTACATGGGAA...AGAAACGTATGGGTCTGGGTGGCCTTTTACATCTTGCCTACCATTGCATGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237871.2 |
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| CDS-3UTR CAA 90 bp | AACCCCAATGTTTCATGCAATGGTAGGCAAGATGTAAAAGGCCACCCAGACCCATTCGAACAAAGGCACTaGTTCCCATGTAACCGATTG | + |
|
Preference number: 5 (lower is better) Translates to: NPNVSCNGRQDVKGHPDPFEQRH*FPCNRL Trigger: CAATCGGTTACATGGGAACAAGTGCCTTTGTTCGAA...TGGGTCTGGGTGGCCTTTTACATCTTGCCTACCATTGCATGAAACATTGGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237871.2 |
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| CDS GCA 90 bp | GGCTCTAGAGGCATGGTAATAAATGGCTATAAAGTTGATGAAGAATaGAGTGCCACACACCATAGCTGGGATAAGGAATGCCCCGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: GSRGMVINGYKVDEE*SATHHSWDKECPDK Trigger: TTTATCGGGGCATTCCTTATCCCAGCTATGGTGTGTGGCACTGCATTCTTCATCAACTTTATAGCCATTTATTACCATGCCTCTAGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS-3UTR CAA 90 bp | CACAGTCTTGCTATATATGTAGGCCTGAGTGTCCTTGAATTCTGGAACCTTCTGGTATTTGGAACCAGCTaGACCTTTCCTTCACTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HSLAIYVGLSVLEFWNLLVFGTS*TFPSLV Trigger: AACTAGTGAAGGAAAGGTCAAGCTGGTTCCAAATAC...CAGAAGGTTCCAGAATTCAAGGACACTCAGGCCTACATATATAGCAAGACTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
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| CDS-3UTR CAA 90 bp | GTTTCATGCAATGGTAGGCAAGATGTAAAAGGCCACCCAGACCCATACGTTTCTCAACAATACCCCATATaGGTAAGTCATCTATGTACA | + |
|
Preference number: 5 (lower is better) Translates to: VSCNGRQDVKGHPDPYVSQQYPI*VSHLCT Trigger: TGTACATAGATGACTTACCAATATGGGGTATTGTTG...AGAAACGTATGGGTCTGGGTGGCCTTTTACATCTTGCCTACCATTGCATGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| CDS-3UTR CAA 90 bp | CAATGGAACCAGAGTCTGCCAGTTACAAATACTAAAATACTCTGCTCTAGAGAAGTATTTATATGTTTCTaGGCGATTGTGGTAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QWNQSLPVTNTKILCSREVFICF*AIVVGP Trigger: GGGCCCTACCACAATCGCCAAGAAACATATAAATAC...TTCTCTAGAGCAGAGTATTTTAGTATTTGTAACTGGCAGACTCTGGTTCCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| CDS-3UTR CAA 90 bp | AACCCAGGTTCAATATATAAAAATGTCCCACAACACATCAACAATGGCAGTAAAGTATTTATATGTTTCTaGGCGATTGTGGTAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NPGSIYKNVPQHINNGSKVFICF*AIVVGP Trigger: GGGCCCTACCACAATCGCCAAGAAACATATAAATAC...TTTACTGCCATTGTTGATGTGTTGTGGGACATTTTTATATATTGAACCTGGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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| CDS-3UTR CAA 90 bp | CTGTACAGTAGATTGTATTATAGAGAGTGCACCTCTACTTTCATACTGTATCTTTCAGGTTTGTCAGGCTaGAGCAGAAAGTACTTACCA | + |
|
Preference number: 5 (lower is better) Translates to: LYSRLYYRECTSTFILYLSGLSG*SRKYLP Trigger: TGGTAAGTACTTTCTGCTCAAGCCTGACAAACCTGA...AAGATACAGTATGAAAGTAGAGGTGCACTCTCTATAATACAATCTACTGTACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025989.10 |
||
| CDS TCA 72 bp | CGAGGCACGGCATTGACACGACAAGGGAAGTTGGGCTaGCCCGACAGATTTCGACCCAGTATTGTACCAACG | + |
|
Preference number: 6 (lower is better) Translates to: RGTALTRQGKLG*PDRFRPSIVPT Trigger: CGTTGGTACAATACTGGGTCGAAATCTGTCGGGTCAGCCCAACTTCCCTTGTCGTGTCAATGCCGTGCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS TCA 72 bp | CATCCAGAGCCAATGAGGGAGGAGAAGATCAGAGGGTaGCTTGACGGTCTGAACACATCTCCATGCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HPEPMREEKIRG*LDGLNTSPCTC Trigger: GCAGGTGCATGGAGATGTGTTCAGACCGTCAAGTCACCCTCTGATCTTCTCCTCCCTCATTGGCTCTGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS GCA 72 bp | GAATGCAGTGCCACACACCATAGCTGGGATAAGGAATaGCCCGATAAACATCTGCTTTATCCATCTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ECSATHHSWDKE*PDKHLLYPSPS Trigger: GGAAGGAGATGGATAAAGCAGATGTTTATCGGGGCATTCCTTATCCCAGCTATGGTGTGTGGCACTGCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS GCA 72 bp | ACCATAGCTGGGATAAGGAATGCCCCGATAAACATCTaGTTTATCCATCTCCTTCCTCCTTGTCTAGCATAC | + |
|
Preference number: 6 (lower is better) Translates to: TIAGIRNAPINI*FIHLLPPCLAY Trigger: GTATGCTAGACAAGGAGGAAGGAGATGGATAAAGCAGATGTTTATCGGGGCATTCCTTATCCCAGCTATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS GCA 72 bp | GGCATGGTAATAAATGGCTATAAAGTTGATGAAGAATaGAGTGCCACACACCATAGCTGGGATAAGGAATGC | + |
|
Preference number: 6 (lower is better) Translates to: GMVINGYKVDEE*SATHHSWDKEC Trigger: GCATTCCTTATCCCAGCTATGGTGTGTGGCACTGCATTCTTCATCAACTTTATAGCCATTTATTACCATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS CCA 72 bp | AAAGTTGATGAAGAATGCAGTGCCACACACCATAGCTaGGATAAGGAATGCCCCGATAAACATCTGCTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: KVDEECSATHHS*DKECPDKHLLY Trigger: ATAAAGCAGATGTTTATCGGGGCATTCCTTATCCCAGCTATGGTGTGTGGCACTGCATTCTTCATCAACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
||
| CDS GCA 72 bp | CAGCATCATGAAGCCATAGACATAGTAGATCTTATATaGCCAGAAGGACGTGAAGATGAAGTACATTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: QHHEAIDIVDLI*PEGREDEVHFN Trigger: ATTGAAATGTACTTCATCTTCACGTCCTTCTGGGCATATAAGATCTACTATGTCTATGGCTTCATGATGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025989.10 ENSMUST00000237871.2 |
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