Pregenerated sensors for TM9SF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025544Ensembl transcript IDs: ENSMUST00000026624.11, ENSMUST00000170007.2, ENSMUST00000171318.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGTGCAGGTGCATGGGAGAGGTGGACTTGGAAGTATGTTGTTTCTaGAGGATTACTAGGCCAATAAGTCTGAGAAAACTCAAGGTAGTC | + |
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Preference number: 1 (lower is better) Translates to: RCRCMGEVDLEVCCF*RITRPISLRKLKVV Trigger: GACTACCTTGAGTTTTCTCAGACTTATTGGCCTAGTAATCCTTCAGAAACAACATACTTCCAAGTCCACCTCTCCCATGCACCTGCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| 3UTR TCA 90 bp | CAGGATTACAGAACTTCTGACTGTCTTCAACCTCATAGCACCACGTaGCAGGCATATTATCCACAATCCAGTGATGCTGATAGTTCAGTA | + |
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Preference number: 1 (lower is better) Translates to: QDYRTSDCLQPHSTT*QAYYPQSSDADSSV Trigger: TACTGAACTATCAGCATCACTGGATTGTGGATAATATGCCTGTCACGTGGTGCTATGAGGTTGAAGACAGTCAGAAGTTCTGTAATCCTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170007.2 |
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| 3UTR TCA 90 bp | CATGACTACAATTTTTATCATTCCTTCAGAGTGAAAATTCAGACTTaGCAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: HDYNFYHSFRVKIQT*QSPTVSLKWKQKVC Trigger: ACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTGTCAAGTCTGAATTTTCACTCTGAAGGAATGATAAAAATTGTAGTCATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTTCTTGTAGGTGCAGGTaGATGGGAGAGGTGGACTTG | + |
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Preference number: 2 (lower is better) Translates to: QSPTVSLKWKQKVCIHSISCRCR*MGEVDL Trigger: CAAGTCCACCTCTCCCATGCACCTGCACCTACAAGA...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| 3UTR-3UTR CCA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTGGTGCATGGGAGAGGTaGACTTGGAAGTATGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: QSPTVSLKWKQKVCIHSIGAWER*TWKYVV Trigger: AACAACATACTTCCAAGTCCACCTCTCCCATGCACC...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| 3UTR-3UTR TCA 90 bp | ATCTGTAATGTAACAGCCAATGGGAAATCCAGGATTACAGAACTTCTGACTGTCTCCCCGAATAATACCTaGCCAAGATTTTCAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: ICNVTANGKSRITELLTVSPNNT*PRFSDG Trigger: CCCATCTGAAAATCTTGGTCAGGTATTATTCGGGGA...GACAGTCAGAAGTTCTGTAATCCTGGATTTCCCATTGGCTGTTACATTACAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170007.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAGCCTTCTCTGTATTGTATGTTTTCGTACAAACGAGCTTACAGGTTTCCCGTAAACTTATACGGTaGGGGTTCAATTCTTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SSAFSVLYVFVQTSLQVSRKLIR*GFNSFP Trigger: GGGGAAAGAATTGAACCCTCACCGTATAAGTTTACG...GGAAACCTGTAAGCTCGTTTGTACGAAAACATACAATACAGAGAAGGCTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170007.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAATGGGAGAGGTGGACTTaGAAGTATGTTGTTTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQWERWT*KYVVSE Trigger: TTCAGAAACAACATACTTCCAAGTCCACCTCTCCCA...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| 3UTR-3UTR TCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAAGAAGTATGTTGTTTCTaGAGGATTACTAGGCCAATA | + |
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Preference number: 2 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQEVCCF*RITRPI Trigger: TATTGGCCTAGTAATCCTTCAGAAACAACATACTTC...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| 3UTR-3UTR CCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAACTTTCATCAGTATTATaGCCTCCTATAATCTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQLSSVL*PPIICH Trigger: ATGGCAGATTATAGGAGGCCATAATACTGATGAAAG...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| 3UTR CCA 72 bp | CATCTTGTAGGTGCAGGTGCATGGGAGAGGTGGACTTaGAAGTATGTTGTTTCTGAAGGATTACTAGGCCAA | + |
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Preference number: 3 (lower is better) Translates to: HLVGAGAWERWT*KYVVSEGLLGQ Trigger: TTGGCCTAGTAATCCTTCAGAAACAACATACTTCCAAGTCCACCTCTCCCATGCACCTGCACCTACAAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| 3UTR TCA 72 bp | AGAACTTCTGACTGTCTTCAACCTCATAGCACCACGTaGCAGGCATATTATCCACAATCCAGTGATGCTGAT | + |
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Preference number: 3 (lower is better) Translates to: RTSDCLQPHSTT*QAYYPQSSDAD Trigger: ATCAGCATCACTGGATTGTGGATAATATGCCTGTCACGTGGTGCTATGAGGTTGAAGACAGTCAGAAGTTCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170007.2 |
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| 3UTR CCA 72 bp | GAAACACATCTTGTAGGTGCAGGTGCATGGGAGAGGTaGACTTGGAAGTATGTTGTTTCTGAAGGATTACTA | + |
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Preference number: 3 (lower is better) Translates to: ETHLVGAGAWER*TWKYVVSEGLL Trigger: TAGTAATCCTTCAGAAACAACATACTTCCAAGTCCACCTCTCCCATGCACCTGCACCTACAAGATGTGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| 3UTR CCA 72 bp | TTTAGTGTTGAAACACATCTTGTAGGTGCAGGTGCATaGGAGAGGTGGACTTGGAAGTATGTTGTTTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: FSVETHLVGAGA*ERWTWKYVVSE Trigger: TTCAGAAACAACATACTTCCAAGTCCACCTCTCCCATGCACCTGCACCTACAAGATGTGTTTCAACACTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR GCA 90 bp | AATGGGAAATCCAGGATTACAGAACTTCTGACTGTCTTCAACCTCATAGCACCAAGCAACCTGGAGCCTTaGGCTGGCGGCGACGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: NGKSRITELLTVFNLIAPSNLEP*AGGDAG Trigger: GCCAGCGTCGCCGCCAGCGCAAGGCTCCAGGTTGCT...TGGTGCTATGAGGTTGAAGACAGTCAGAAGTTCTGTAATCCTGGATTTCCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170007.2 |
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| CDS-3UTR CCA 90 bp | AAATCCAGGATTACAGAACTTCTGACTGTCTTCAACCTCATAGCACCACGTGACACAGCAGCAGCAACCTaGAGCCTTGCGCTGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: KSRITELLTVFNLIAPRDTAAAT*SLALAA Trigger: CGCCGCCAGCGCAAGGCTCCAGGTTGCTGCTGCTGT...GTCACGTGGTGCTATGAGGTTGAAGACAGTCAGAAGTTCTGTAATCCTGGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170007.2 |
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| CDS-3UTR GCA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTAGCAACCTGGAGCCTTaGGCTGGCGGCGACGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSPTVSLKWKQKVCIHSISNLEP*AGGDAG Trigger: GCCAGCGTCGCCGCCAGCGCAAGGCTCCAGGTTGCT...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CCA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTACAGCAGCAGCAACCTaGAGCCTTGCGCTGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: QSPTVSLKWKQKVCIHSITAAAT*SLALAA Trigger: CGCCGCCAGCGCAAGGCTCCAGGTTGCTGCTGCTGT...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR GCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAACATAGCCAGCAGGTGTaGCCAGTAGCACCCACAAGA | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQHSQQV*PVAPTR Trigger: TCTTGTGGGTGCTACTGGGCACACCTGCTGGCTATG...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR TCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAAAAAAGGAATGGCTGCTaGAGAGCCTTCTCCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQKRNGC*RAFSPE Trigger: CTCTGGGGAGAAGGCTCTTCAGCAGCCATTCCTTTT...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR GCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAAGTACAGGATTGTACTTaGTGTCCCCGTGATCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQVQDCT*CPRDLQ Trigger: CTGCAGATCACGGGGACAGCAAGTACAATCCTGTAC...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAACAGCATCCCCTTTCTTaGAGGACGGAATATATCCCC | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQQHPLS*RTEYIP Trigger: GGGGATATATTCCGTCCTCCAAGAAAGGGGATGCTG...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CCA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTGAGTGCCAAAAGGAATaGCTGCTGAAGAGCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QSPTVSLKWKQKVCIHSIECQKE*LLKSLL Trigger: GAGAAGGCTCTTCAGCAGCCATTCCTTTTGGCACTC...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR TCA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTTGGGCGTTTTCCTTCTaGCGCTTGGCAAAAGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: QSPTVSLKWKQKVCIHSIWAFSF*RLAKVK Trigger: TTTGACTTTTGCCAAGCGTCAGAAGGAAAACGCCCA...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR TCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAACCTCATAGCACCACGTaGCAGGCATATTATCCACAA | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQPHSTT*QAYYPQ Trigger: TTGTGGATAATATGCCTGTCACGTGGTGCTATGAGG...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR GCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAACTCCTGAAGCCTTGTTaGTTATATCCATGGCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQLLKPC*LYPWQV Trigger: GACCTGCCATGGATATAAGCAACAAGGCTTCAGGAG...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR GCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAATCAAAGGCACAGATATaGAGAACCAGAGGGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQSKAQI*RTRGPR Trigger: TCTTGGCCCTCTGGTTCTGCATATCTGTGCCTTTGA...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAATGTTGCTTATATCCATaGCAGGTCCAGAGCAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQCCLYP*QVQSSL Trigger: CAGACTGCTCTGGACCTGCCATGGATATAAGCAACA...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAAGACGAGGGATCTGATTaGTTCGAACTGGGTGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQDEGSD*FELGVQ Trigger: TTGAACACCCAGTTCGAACCAATCAGATCCCTCGTC...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR TCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAATCCCCGAATAATACCTaGCCAAGATTTTCAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQSPNNT*PRFSDG Trigger: CCCATCTGAAAATCTTGGTCAGGTATTATTCGGGGA...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR TCA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCGTAAACTTATACGGTaGGGGTTCAATTCTTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: QSPTVSLKWKQKVCIHSIRKLIR*GFNSFP Trigger: GGGGAAAGAATTGAACCCTCACCGTATAAGTTTACG...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR TCA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTTCTCTCGTGGAATTCTaGACTGATAACACAGGCATC | + |
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Preference number: 4 (lower is better) Translates to: QSPTVSLKWKQKVCIHSISLVEF*TDNTGI Trigger: GATGCCTGTGTTATCAGTTCAGAATTCCACGAGAGA...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CCA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTAGGATTTGTAGAATCTaGCAGCAACATAGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: QSPTVSLKWKQKVCIHSIRICRI*QQHSQQ Trigger: CTGCTGGCTATGTTGCTGCCAGATTCTACAAATCCT...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR TCA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCGGAATATATCCCCATaGACTAGTTTCCAGCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: QSPTVSLKWKQKVCIHSIRNISP*TSFQPN Trigger: ATTTGGCTGGAAACTAGTTCATGGGGATATATTCCG...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAATTTCCTTCTGACGCTTaGCAAAAGTCAAACGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQFPSDA*QKSNAV Trigger: TACAGCGTTTGACTTTTGCCAAGCGTCAGAAGGAAA...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAACTGATTGGTTCGAACTaGGTGTTCAATGGCATTCTT | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQLIGSN*VFNGIL Trigger: AAGAATGCCATTGAACACCCAGTTCGAACCAATCAG...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR TCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAACTATGTGGGTATGCTTaGAGCTTTTTGGTTCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQLCGYA*SFLVQV Trigger: AACTTGAACCAAAAAGCTTCAAGCATACCCACATAG...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR TCA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTAAGTATAGGCAATTTTaGTCTCTCCTGAAGCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: QSPTVSLKWKQKVCIHSIKYRQF*SLLKPC Trigger: ACAAGGCTTCAGGAGAGATCAAAATTGCCTATACTT...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CCA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTATGCTTGAAGCTTTTTaGTTCAAGTTTAGCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: QSPTVSLKWKQKVCIHSIMLEAF*FKFSSH Trigger: GTGGCTGCTAAACTTGAACCAAAAAGCTTCAAGCAT...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CCA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTTCCGTAGAGTCCATCTaGTTATATCTGGCAATATCT | + |
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Preference number: 4 (lower is better) Translates to: QSPTVSLKWKQKVCIHSISVESI*LYLAIS Trigger: AGATATTGCCAGATATAACCAGATGGACTCTACGGA...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR GCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAACTTAAAGCCAAAGTATaGACCAATAAACGTCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQLKAKV*TNKRQR Trigger: CCTTTGACGTTTATTGGTGCATACTTTGGCTTTAAG...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR GCA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTGCAAAGAAGTATAGTTaGTTCGGAACAGGTAATAAC | + |
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Preference number: 4 (lower is better) Translates to: QSPTVSLKWKQKVCIHSIAKKYS*FGTGNN Trigger: GTTATTACCTGTTCCGAAGCAACTATACTTCTTTGC...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CCA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTAAAGTGTCTCTCTCGTaGAATTCTGAACTGATAACA | + |
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Preference number: 4 (lower is better) Translates to: QSPTVSLKWKQKVCIHSIKVSLS*NSELIT Trigger: TGTTATCAGTTCAGAATTCCACGAGAGAGACACTTT...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAACCATCTGGTTATATCTaGCAATATCTTTATGTAGCG | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQPSGYI*QYLYVA Trigger: CGCTACATAAAGATATTGCCAGATATAACCAGATGG...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAATCTGGTTTATCTATGTaGGTATGCTTGAAGCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQSGLSM*VCLKLF Trigger: AAAAAGCTTCAAGCATACCCACATAGATAAACCAGA...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CCA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAAAGAAGAAGTAGTGTATaGCGTATATCAGGAAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQRRSSV*RISGSK Trigger: TTTACTTCCTGATATACGCCATACACTACTTCTTCT...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS TCA 90 bp | CTATATCAGCCTTGCACTCGTTGCTCTTCTCTTCGGCGCAGAAGTTaGCCGGCGCCAGGCCGGGCAGGTAGAAGGCGCTTCCCGGGCGCG | + |
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Preference number: 5 (lower is better) Translates to: LYQPCTRCSSLRRRS*PAPGRAGRRRFPGA Trigger: CGCGCCCGGGAAGCGCCTTCTACCTGCCCGGCCTGGCGCCGGTCAACTTCTGCGCCGAAGAGAAGAGCAACGAGTGCAAGGCTGATATAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026624.11 ENSMUST00000171318.2 |
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| CDS-3UTR CAA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAATCTTCGGCGCAGAAGTaGACCGGCGCCAGGCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQSSAQK*TGARPG Trigger: GCCCGGCCTGGCGCCGGTCAACTTCTGCGCCGAAGA...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CAA 90 bp | TCCTTCTTATTAAACGTAAACTTATACGGTGAGGGTTCAATTCTTTCCCCGAATTCTTCGGCGCAGAAGTaGACCGGCGCCAGGCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: SFLLNVNLYGEGSILSPNSSAQK*TGARPG Trigger: GCCCGGCCTGGCGCCGGTCAACTTCTGCGCCGAAGA...ATTCGGGGAAAGAATTGAACCCTCACCGTATAAGTTTACGTTTAATAAGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170007.2 |
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| CDS-3UTR CAA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAATCAGCCTTGCACTCGTaGCTCTTCTCTTCGGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQSALHS*LFSSAQ Trigger: CTGCGCCGAAGAGAAGAGCAACGAGTGCAAGGCTGA...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CAA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTATCAGGGCTCCTCGATaGGCAGGGGACAAGAATCCC | + |
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Preference number: 5 (lower is better) Translates to: QSPTVSLKWKQKVCIHSIIRAPR*AGDKNP Trigger: GGGATTCTTGTCCCCTGCCAATCGAGGAGCCCTGAT...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CAA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAAGCAGCATCCCCTTTCTaGGAGGACGGAATATATCCC | + |
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Preference number: 5 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQAASPF*EDGIYP Trigger: GGGATATATTCCGTCCTCCAAGAAAGGGGATGCTGC...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CAA 90 bp | AGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTCAATGCCAGGCAAAGGCTTaGTGTAGAACGACTGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: SPTVSLKWKQKVCIHSIQCQAKA*CRTTAQ Trigger: CTGAGCAGTCGTTCTACACAAAGCCTTTGCCTGGCA...TTGAATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS-3UTR CAA 90 bp | TTATTAAACGTAAACTTATACGGTGAGGGTTCAATTCTTTCCCCGAATAATACCCAAACCTTGCACTCGTaGCTCTTCTCTTCGGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: LLNVNLYGEGSILSPNNTQTLHS*LFSSAQ Trigger: CTGCGCCGAAGAGAAGAGCAACGAGTGCAAGGTTTG...GGTATTATTCGGGGAAAGAATTGAACCCTCACCGTATAAGTTTACGTTTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170007.2 |
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| CDS GCA 90 bp | GATCAAAACCATTATCATAGTATAACCGAAGTACAGGATTGTACTTaGTGTCCCCGTGATCTGCAGTTTGGAGAAGAAGTAGTGTATGGC | + |
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Preference number: 5 (lower is better) Translates to: DQNHYHSITEVQDCT*CPRDLQFGEEVVYG Trigger: GCCATACACTACTTCTTCTCCAAACTGCAGATCACGGGGACAGCAAGTACAATCCTGTACTTCGGTTATACTATGATAATGGTTTTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026624.11 ENSMUST00000171318.2 |
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| CDS-3UTR CAA 90 bp | CAAAGCCCGACAGTTTCACTTAAGTGGAAACAGAAAGTGTGTATCCACAGTATTATCTCTCCTGAAGCCTaGTTGCTTATATCCATGGCA | + |
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Preference number: 5 (lower is better) Translates to: QSPTVSLKWKQKVCIHSIISPEA*LLISMA Trigger: TGCCATGGATATAAGCAACAAGGCTTCAGGAGAGAT...AATACTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS TCA 90 bp | TTCCTCAAAACTAATAGAATAAGTATAGGCAATTTTGATCTCTCCTaGAGCCTTGTTGCTTATATCCATGGCAGGTCCAGAGCAGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: FLKTNRISIGNFDLS*SLVAYIHGRSRAVW Trigger: CCAGACTGCTCTGGACCTGCCATGGATATAAGCAACAAGGCTTCAGGAGAGATCAAAATTGCCTATACTTATTCTATTAGTTTTGAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS TCA 72 bp | CCTTGCACTCGTTGCTCTTCTCTTCGGCGCAGAAGTTaGCCGGCGCCAGGCCGGGCAGGTAGAAGGCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PCTRCSSLRRRS*PAPGRAGRRRF Trigger: GAAGCGCCTTCTACCTGCCCGGCCTGGCGCCGGTCAACTTCTGCGCCGAAGAGAAGAGCAACGAGTGCAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026624.11 ENSMUST00000170007.2 ENSMUST00000171318.2 |
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| CDS CAA 90 bp | GAATCAAGCCGGTTAACAAACAATTCTATATCAGCCTTGCACTCGTaGCTCTTCTCTTCGGCGCAGAAGTTGACCGGCGCCAGGCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: ESSRLTNNSISALHS*LFSSAQKLTGARPG Trigger: GCCCGGCCTGGCGCCGGTCAACTTCTGCGCCGAAGAGAAGAGCAACGAGTGCAAGGCTGATATAGAATTGTTTGTTAACCGGCTTGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026624.11 ENSMUST00000171318.2 |
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| CDS GCA 72 bp | ATATGCAGAACCAGAGGGCCAAGATGGCAACCAGAGTaGCAAAAGGAATGGCTGCTGAAGAGCCTTCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: ICRTRGPRWQPE*QKEWLLKSLLP Trigger: GGGGAGAAGGCTCTTCAGCAGCCATTCCTTTTGGCACTCTGGTTGCCATCTTGGCCCTCTGGTTCTGCATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026624.11 ENSMUST00000171318.2 |
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| CDS CAA 90 bp | GATTCCACCGAATCAAGCCGGTTAACAAACAATTCTATATCAGCCTaGCACTCGTTGCTCTTCTCTTCGGCGCAGAAGTTGACCGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: DSTESSRLTNNSISA*HSLLFSSAQKLTGA Trigger: GGCGCCGGTCAACTTCTGCGCCGAAGAGAAGAGCAACGAGTGCAAGGCTGATATAGAATTGTTTGTTAACCGGCTTGATTCGGTGGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026624.11 ENSMUST00000171318.2 |
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| CDS CCA 72 bp | TCAAAGGCACAGATATGCAGAACCAGAGGGCCAAGATaGCAACCAGAGTGCCAAAAGGAATGGCTGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SKAQICRTRGPR*QPECQKEWLLK Trigger: CTTCAGCAGCCATTCCTTTTGGCACTCTGGTTGCCATCTTGGCCCTCTGGTTCTGCATATCTGTGCCTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026624.11 ENSMUST00000171318.2 |
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| CDS CAA 72 bp | CGGTTAACAAACAATTCTATATCAGCCTTGCACTCGTaGCTCTTCTCTTCGGCGCAGAAGTTGACCGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: RLTNNSISALHS*LFSSAQKLTGA Trigger: GGCGCCGGTCAACTTCTGCGCCGAAGAGAAGAGCAACGAGTGCAAGGCTGATATAGAATTGTTTGTTAACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026624.11 ENSMUST00000171318.2 |
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| CDS TCA 72 bp | AGCATCCCCTTTCTTGGAGGACGGAATATATCCCCATaGACTAGTTTCCAGCCAAATTCTTCCTGGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: SIPFLGGRNISP*TSFQPNSSWAS Trigger: AGATGCCCAGGAAGAATTTGGCTGGAAACTAGTTCATGGGGATATATTCCGTCCTCCAAGAAAGGGGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026624.11 ENSMUST00000171318.2 |
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| CDS CCA 72 bp | TTTTCCACTTTTCACCACCAAAGGATTTGTAGAATCTaGCAGCAACATAGCCAGCAGGTGTGCCCAGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: FSTFHHQRICRI*QQHSQQVCPVA Trigger: TGCTACTGGGCACACCTGCTGGCTATGTTGCTGCCAGATTCTACAAATCCTTTGGTGGTGAAAAGTGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026624.11 ENSMUST00000171318.2 |
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| CDS TCA 72 bp | TATAACCGAAGTACAGGATTGTACTTGCTGTCCCCGTaGTCTGCAGTTTGGAGAAGAAGTAGTGTATGGCGT | + |
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Preference number: 6 (lower is better) Translates to: YNRSTGLYLLSP*SAVWRRSSVWR Trigger: ACGCCATACACTACTTCTTCTCCAAACTGCAGATCACGGGGACAGCAAGTACAATCCTGTACTTCGGTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026624.11 ENSMUST00000171318.2 |
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| CDS CAA 72 bp | GAATCAAGCCGGTTAACAAACAATTCTATATCAGCCTaGCACTCGTTGCTCTTCTCTTCGGCGCAGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: ESSRLTNNSISA*HSLLFSSAQKL Trigger: CAACTTCTGCGCCGAAGAGAAGAGCAACGAGTGCAAGGCTGATATAGAATTGTTTGTTAACCGGCTTGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026624.11 ENSMUST00000171318.2 |
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| CDS CCA 72 bp | TCCATGGCAGGTCCAGAGCAGTCTGGTTTATCTATGTaGGTATGCTTGAAGCTTTTTGGTTCAAGTTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: SMAGPEQSGLSM*VCLKLFGSSLA Trigger: TGCTAAACTTGAACCAAAAAGCTTCAAGCATACCCACATAGATAAACCAGACTGCTCTGGACCTGCCATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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| CDS CCA 72 bp | CTCAGGAATCTGACGAGGGATCTGATTGGTTCGAACTaGGTGTTCAATGGCATTCTTCTTAAAGCCAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: LRNLTRDLIGSN*VFNGILLKAKV Trigger: TACTTTGGCTTTAAGAAGAATGCCATTGAACACCCAGTTCGAACCAATCAGATCCCTCGTCAGATTCCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026624.11 ENSMUST00000171318.2 |
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| CDS GCA 72 bp | CATTATCATAGTATAACCGAAGTACAGGATTGTACTTaGTGTCCCCGTGATCTGCAGTTTGGAGAAGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: HYHSITEVQDCT*CPRDLQFGEEV Trigger: TACTTCTTCTCCAAACTGCAGATCACGGGGACAGCAAGTACAATCCTGTACTTCGGTTATACTATGATAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026624.11 ENSMUST00000171318.2 |
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| CDS GCA 72 bp | TGGGTGTTCAATGGCATTCTTCTTAAAGCCAAAGTATaGACCAATAAACGTCAAAGGCACAGATATGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: WVFNGILLKAKV*TNKRQRHRYAE Trigger: TTCTGCATATCTGTGCCTTTGACGTTTATTGGTGCATACTTTGGCTTTAAGAAGAATGCCATTGAACACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026624.11 ENSMUST00000171318.2 |
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| CDS TCA 72 bp | ACTAATAGAATAAGTATAGGCAATTTTGATCTCTCCTaGAGCCTTGTTGCTTATATCCATGGCAGGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: TNRISIGNFDLS*SLVAYIHGRSR Trigger: TCTGGACCTGCCATGGATATAAGCAACAAGGCTTCAGGAGAGATCAAAATTGCCTATACTTATTCTATTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026624.11 |
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