Pregenerated sensors for TM7SF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040234Ensembl transcript IDs: ENSMUST00000037709.16, ENSMUST00000127529.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTACATCCACGGGGGCGTCACCCTGTCACCCACCCTGGCTGGCCCTaGATGGACCTGGGACAACTGGGCAGTCTAGACGAGAACTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: VHPRGRHPVTHPGWP*MDLGQLGSLDENSR Trigger: CCTGGAGTTCTCGTCTAGACTGCCCAGTTGTCCCAGGTCCATGCAGGGCCAGCCAGGGTGGGTGACAGGGTGACGCCCCCGTGGATGTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR CCA 90 bp | ACTGCTGTACATCCACGGGGGCGTCACCCTGTCACCCACCCTGGCTaGCCCTGCATGGACCTGGGACAACTGGGCAGTCTAGACGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: TAVHPRGRHPVTHPG*PCMDLGQLGSLDEN Trigger: GTTCTCGTCTAGACTGCCCAGTTGTCCCAGGTCCATGCAGGGCCAGCCAGGGTGGGTGACAGGGTGACGCCCCCGTGGATGTACAGCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR GCA 90 bp | AGCGCACTGTGGGCCACACACGTCAGGGAAGCCAGTTCTCAGCCCTaGCGTTCAGAGGAGTCAAGAGCATGTCCCTCCTTACAGAACCCA | + |
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Preference number: 1 (lower is better) Translates to: SALWATHVREASSQP*RSEESRACPSLQNP Trigger: TGGGTTCTGTAAGGAGGGACATGCTCTTGACTCCTCTGAACGGCAGGGCTGAGAACTGGCTTCCCTGACGTGTGTGGCCCACAGTGCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR TCA 90 bp | CACTTTCGTAGATACTCTTCCAGGAAAAGCACAGTTACCATCCACTaGCTCAAAGCTGCAGGCGTATGTGTGCACGGGCACATAAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: HFRRYSSRKSTVTIH*LKAAGVCVHGHISS Trigger: GCTGCTTATGTGCCCGTGCACACATACGCCTGCAGCTTTGAGTCAGTGGATGGTAACTGTGCTTTTCCTGGAAGAGTATCTACGAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127529.2 |
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| 3UTR GCA 90 bp | ACTGAAGACTCCACCCACTCCCTGAAATGTCAAGGCTATAGTCATTaGTGTGAAGAGACTAAGAAGCACACCACTGACAAACCAGCGCAC | + |
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Preference number: 1 (lower is better) Translates to: TEDSTHSLKCQGYSH*CEETKKHTTDKPAH Trigger: GTGCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTTCACAGCAATGACTATAGCCTTGACATTTCAGGGAGTGGGTGGAGTCTTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR TCA 90 bp | ACAAAGCGAATAAATACCCACTGCCTGCCTCCCCTCCACAGGTTCTaGCTGAGTCATAACTGTCCAAGAAGCTACAAGAACAAAACACTA | + |
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Preference number: 1 (lower is better) Translates to: TKRINTHCLPPLHRF*LSHNCPRSYKNKTL Trigger: TAGTGTTTTGTTCTTGTAGCTTCTTGGACAGTTATGACTCAGTCAGAACCTGTGGAGGGGAGGCAGGCAGTGGGTATTTATTCGCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR-3UTR TCA 90 bp | GCAGGCGTATGTGTGCACGGGCACATAAGCAGCAGAAGTATTGAGGGACGGATCTTAGGGTGGCCACCTTaGTGGCACTGGCCTTCACCT | + |
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Preference number: 2 (lower is better) Translates to: AGVCVHGHISSRSIEGRILGWPP*WHWPSP Trigger: AGGTGAAGGCCAGTGCCATCAAGGTGGCCACCCTAA...GATCCGTCCCTCAATACTTCTGCTGCTTATGTGCCCGTGCACACATACGCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127529.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCCTAAACTTCTACACACAAAGCGAATAAATACCCACTGCCTGCCTCCCCTCCACCCTGGCTGGCCCTaGATGGACCTGGGACAACTG | + |
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Preference number: 2 (lower is better) Translates to: IPKLLHTKRINTHCLPPLHPGWP*MDLGQL Trigger: CAGTTGTCCCAGGTCCATGCAGGGCCAGCCAGGGTG...GAGGGGAGGCAGGCAGTGGGTATTTATTCGCTTTGTGTGTAGAAGTTTAGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR-3UTR GCA 90 bp | AAGAGACTAAGAAGCACACCACTGACAAACCAGCGCACTGTGGGCCACACACGTGCCAGTTCTCAGCCCTaGCGTTCAGAGGAGTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: KRLRSTPLTNQRTVGHTRASSQP*RSEESR Trigger: TCTTGACTCCTCTGAACGGCAGGGCTGAGAACTGGC...ACGTGTGTGGCCCACAGTGCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR-3UTR CCA 90 bp | GCTATAGTCATTGCTGTGAAGAGACTAAGAAGCACACCACTGACAAACCAGCGCCTGGCTGGCCCTGCATaGACCTGGGACAACTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: AIVIAVKRLRSTPLTNQRLAGPA*TWDNWA Trigger: TGCCCAGTTGTCCCAGGTCCATGCAGGGCCAGCCAG...GCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTTCACAGCAATGACTATAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR CAA 90 bp | AGTATTGAGGGACGGATCCCAAACGATGACATTATAGATGACTCCTaGTCCCGGGAGGGAAGAGAAGGACACGGCTGTTTTATCGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SIEGRIPNDDIIDDS*SREGREGHGCFIVS Trigger: GCTGACGATAAAACAGCCGTGTCCTTCTCTTCCCTCCCGGGACAAGGAGTCATCTATAATGTCATCGTTTGGGATCCGTCCCTCAATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127529.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAGACTAAGAAGCACACCACTGACAAACCAGCGCACTGTGGGCCACACACGTCAAGACTGTGGAAAATaGGGAAAAACATCTACGGCC | + |
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Preference number: 2 (lower is better) Translates to: KRLRSTPLTNQRTVGHTRQDCGK*GKTSTA Trigger: GGCCGTAGATGTTTTTCCTCATTTTCCACAGTCTTG...ACGTGTGTGGCCCACAGTGCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR-3UTR CCA 90 bp | AAGAGACTAAGAAGCACACCACTGACAAACCAGCGCACTGTGGGCCACACACGTAACTTCTCAAGACTGTaGAAAATGAGGAAAAACATC | + |
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Preference number: 2 (lower is better) Translates to: KRLRSTPLTNQRTVGHTRNFSRL*KMRKNI Trigger: GATGTTTTTCCTCATTTTCCACAGTCTTGAGAAGTT...ACGTGTGTGGCCCACAGTGCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR-3UTR CCA 90 bp | TGTCCAAGAAGCTACAAGAACAAAACACTAGGGCTTCAAGGAGACATTTTTATTCTACGGCCAACTTTTTaGAGACTTTTCTCACCATAT | + |
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Preference number: 2 (lower is better) Translates to: CPRSYKNKTLGLQGDIFILRPTF*RLFSPY Trigger: ATATGGTGAGAAAAGTCTCCAAAAAGTTGGCCGTAG...AATAAAAATGTCTCCTTGAAGCCCTAGTGTTTTGTTCTTGTAGCTTCTTGGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR GCA 72 bp | TGGGCCACACACGTCAGGGAAGCCAGTTCTCAGCCCTaGCGTTCAGAGGAGTCAAGAGCATGTCCCTCCTTA | + |
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Preference number: 3 (lower is better) Translates to: WATHVREASSQP*RSEESRACPSL Trigger: TAAGGAGGGACATGCTCTTGACTCCTCTGAACGGCAGGGCTGAGAACTGGCTTCCCTGACGTGTGTGGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR TCA 72 bp | ATGTCCCTCCTTACAGAACCCATGGTGGTGGCTAAGTaGTCAATCCCTCTGAGCTTCAGAGCACAGGGGCTT | + |
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Preference number: 3 (lower is better) Translates to: MSLLTEPMVVAK*SIPLSFRAQGL Trigger: AAGCCCCTGTGCTCTGAAGCTCAGAGGGATTGATCACTTAGCCACCACCATGGGTTCTGTAAGGAGGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR TCA 72 bp | AGATACTCTTCCAGGAAAAGCACAGTTACCATCCACTaGCTCAAAGCTGCAGGCGTATGTGTGCACGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: RYSSRKSTVTIH*LKAAGVCVHGH Trigger: GTGCCCGTGCACACATACGCCTGCAGCTTTGAGTCAGTGGATGGTAACTGTGCTTTTCCTGGAAGAGTATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127529.2 |
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| 3UTR-3UTR CAA 90 bp | AAGAGACTAAGAAGCACACCACTGACAAACCAGCGCACTGTGGGCCACACACGTTCTACGGCCAACTTTTaGGAGACTTTTCTCACCATA | + |
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Preference number: 3 (lower is better) Translates to: KRLRSTPLTNQRTVGHTRSTANF*ETFLTI Trigger: TATGGTGAGAAAAGTCTCCAAAAAGTTGGCCGTAGA...ACGTGTGTGGCCCACAGTGCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR-3UTR CAA 90 bp | CTGTGTCCAAAGAAACAAACGAAGAGCCCAAGCAGGGCAACCAAAGTGGAGAACATTATAGATGACTCCTaGTCCCGGGAGGGAAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: LCPKKQTKSPSRATKVENIIDDS*SREGRE Trigger: TTCTCTTCCCTCCCGGGACAAGGAGTCATCTATAAT...GTTCTCCACTTTGGTTGCCCTGCTTGGGCTCTTCGTTTGTTTCTTTGGACACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127529.2 |
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| 3UTR TCA 72 bp | ATAAATACCCACTGCCTGCCTCCCCTCCACAGGTTCTaGCTGAGTCATAACTGTCCAAGAAGCTACAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: INTHCLPPLHRF*LSHNCPRSYKN Trigger: GTTCTTGTAGCTTCTTGGACAGTTATGACTCAGTCAGAACCTGTGGAGGGGAGGCAGGCAGTGGGTATTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR TCA 72 bp | TTCACAGGTGCTAGGAAGGTCTCATTGATGTCTCTCTaGCAAAATACGGTCCAGTCACCGTCTAATGCAACC | + |
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Preference number: 3 (lower is better) Translates to: FTGARKVSLMSL*QNTVQSPSNAT Trigger: GGTTGCATTAGACGGTGACTGGACCGTATTTTGTCAGAGAGACATCAATGAGACCTTCCTAGCACCTGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR TCA 72 bp | ATTAGCACAACTTCACAGGTGCTAGGAAGGTCTCATTaGTGTCTCTCTGACAAAATACGGTCCAGTCACCGT | + |
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Preference number: 3 (lower is better) Translates to: ISTTSQVLGRSH*CLSDKIRSSHR Trigger: ACGGTGACTGGACCGTATTTTGTCAGAGAGACATCAATGAGACCTTCCTAGCACCTGTGAAGTTGTGCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| 3UTR GCA 72 bp | CAAAGAATAGTTCTCCAACAATCTGTACAACTAAAATaGAAGCATGTGACAAGCCAGAAACCCTATAGCAAT | + |
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Preference number: 3 (lower is better) Translates to: QRIVLQQSVQLK*KHVTSQKPYSN Trigger: ATTGCTATAGGGTTTCTGGCTTGTCACATGCTTGCATTTTAGTTGTACAGATTGTTGGAGAACTATTCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR TCA 90 bp | AAGAGACTAAGAAGCACACCACTGACAAACCAGCGCACTGTGGGCCACACACGTTTAGGGTGGCCACCTTaGTGGCACTGGCCTTCACCT | + |
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Preference number: 4 (lower is better) Translates to: KRLRSTPLTNQRTVGHTRLGWPP*WHWPSP Trigger: AGGTGAAGGCCAGTGCCATCAAGGTGGCCACCCTAA...ACGTGTGTGGCCCACAGTGCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR GCA 90 bp | ATCCCTAAACTTCTACACACAAAGCGAATAAATACCCACTGCCTGCCTCCCCTCTGGACTCTCGGCTGGTaGTCACATCACACGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: IPKLLHTKRINTHCLPPLWTLGW*SHHTVG Trigger: CCCCACCGTGTGATGTGAGCACCAGCCGAGAGTCCA...GAGGGGAGGCAGGCAGTGGGTATTTATTCGCTTTGTGTGTAGAAGTTTAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR CCA 90 bp | AAGAGACTAAGAAGCACACCACTGACAAACCAGCGCACTGTGGGCCACACACGTGCCGGCTGTTCCTTCTaGAAGAGCTCTTTGATCCGA | + |
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Preference number: 4 (lower is better) Translates to: KRLRSTPLTNQRTVGHTRAGCSF*KSSLIR Trigger: TCGGATCAAAGAGCTCTTCCAGAAGGAACAGCCGGC...ACGTGTGTGGCCCACAGTGCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR TCA 90 bp | AAGAGACTAAGAAGCACACCACTGACAAACCAGCGCACTGTGGGCCACACACGTAAAGGTCACATTGCTTaGAATATGGCGCAGGACGGC | + |
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Preference number: 4 (lower is better) Translates to: KRLRSTPLTNQRTVGHTRKGHIA*NMAQDG Trigger: GCCGTCCTGCGCCATATTTCAAGCAATGTGACCTTT...ACGTGTGTGGCCCACAGTGCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR TCA 90 bp | CACAGTTACCATCCACTGACTCAAAGCTGCAGGCGTATGTGTGCACGGGCACATAAAGGTCACATTGCTTaGAATATGGCGCAGGACGGC | + |
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Preference number: 4 (lower is better) Translates to: HSYHPLTQSCRRMCARAHKGHIA*NMAQDG Trigger: GCCGTCCTGCGCCATATTTCAAGCAATGTGACCTTT...ATGTGCCCGTGCACACATACGCCTGCAGCTTTGAGTCAGTGGATGGTAACTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127529.2 |
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| CDS-3UTR TCA 90 bp | AAGAGACTAAGAAGCACACCACTGACAAACCAGCGCACTGTGGGCCACACACGTGGGGTGTCAGTCTGGTaGTCAGGATGTAGAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: KRLRSTPLTNQRTVGHTRGVSVW*SGCRRR Trigger: TCTTCTTCTACATCCTGATCACCAGACTGACACCCC...ACGTGTGTGGCCCACAGTGCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR TCA 90 bp | CTCGGGCAGGAAGTACTGGTACACGTCATAGCGCAGCCTCCACCTGGACTCTCGGGTATTCTGATACTGTaGGTGTATTTGGAAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LGQEVLVHVIAQPPPGLSGILIL*VYLEKK Trigger: CTTCTTTTCCAAATACACTCACAGTATCAGAATACC...CGAGAGTCCAGGTGGAGGCTGCGCTATGACGTGTACCAGTACTTCCTGCCCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127529.2 |
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| CDS-3UTR CCA 90 bp | ATCCCTAAACTTCTACACACAAAGCGAATAAATACCCACTGCCTGCCTCCCCTCGAGGGATGTGATGGCTaGGGTCCAGGATGTTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: IPKLLHTKRINTHCLPPLEGCDG*GPGCWS Trigger: TGACCAACATCCTGGACCCCAGCCATCACATCCCTC...GAGGGGAGGCAGGCAGTGGGTATTTATTCGCTTTGTGTGTAGAAGTTTAGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR TCA 90 bp | ATCCCTAAACTTCTACACACAAAGCGAATAAATACCCACTGCCTGCCTCCCCTCGGTTTCCCAGAGGCGTaGAGAAAGTCCCAGAAGACA | + |
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Preference number: 4 (lower is better) Translates to: IPKLLHTKRINTHCLPPLGFPEA*RKSQKT Trigger: TGTCTTCTGGGACTTTCTTCACGCCTCTGGGAAACC...GAGGGGAGGCAGGCAGTGGGTATTTATTCGCTTTGTGTGTAGAAGTTTAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR GCA 90 bp | GCAGGCGTATGTGTGCACGGGCACATAAGCAGCAGAAGTATTGAGGGACGGATCGAAGAAAGGTCACATTaGTTGAAATATGGCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: AGVCVHGHISSRSIEGRIEERSH*LKYGAG Trigger: TCCTGCGCCATATTTCAAGCAATGTGACCTTTCTTC...GATCCGTCCCTCAATACTTCTGCTGCTTATGTGCCCGTGCACACATACGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127529.2 |
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| CDS-3UTR GCA 90 bp | AGCCAGTTCTCAGCCCTGCCGTTCAGAGGAGTCAAGAGCATGTCCCTCCTTACAAATCAAACTCCAAATTaGAGCCTCCAGGAATGGGAT | + |
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Preference number: 4 (lower is better) Translates to: SQFSALPFRGVKSMSLLTNQTPN*SLQEWD Trigger: ATCCCATTCCTGGAGGCTGCAATTTGGAGTTTGATT...TGTAAGGAGGGACATGCTCTTGACTCCTCTGAACGGCAGGGCTGAGAACTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR TCA 90 bp | GCTATAGTCATTGCTGTGAAGAGACTAAGAAGCACACCACTGACAAACCAGCGCAATGGGATCTCTTTCTaGGTAGGAGAGCGTAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: AIVIAVKRLRSTPLTNQRNGISF*VGERKG Trigger: GCCCTTACGCTCTCCTACTCAGAAAGAGATCCCATT...GCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTTCACAGCAATGACTATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR GCA 90 bp | ATCCCTAAACTTCTACACACAAAGCGAATAAATACCCACTGCCTGCCTCCCCTCGGATGTTGGTCACTCTaGGTTCTCTCTCTTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: IPKLLHTKRINTHCLPPLGCWSL*VLSLAS Trigger: GGAAGCAAGAGAGAGAACGCAGAGTGACCAACATCC...GAGGGGAGGCAGGCAGTGGGTATTTATTCGCTTTGTGTGTAGAAGTTTAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR CCA 90 bp | ATCCCTAAACTTCTACACACAAAGCGAATAAATACCCACTGCCTGCCTCCCCTCGCCCATGAAGATGACTaGAACAAGCAGCGCTATGCA | + |
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Preference number: 4 (lower is better) Translates to: IPKLLHTKRINTHCLPPLAHEDD*NKQRYA Trigger: TGCATAGCGCTGCTTGTTCCAGTCATCTTCATGGGC...GAGGGGAGGCAGGCAGTGGGTATTTATTCGCTTTGTGTGTAGAAGTTTAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR TCA 90 bp | GAGACTAAGAAGCACACCACTGACAAACCAGCGCACTGTGGGCCACACACGTCAGGTATTCTGATACTGTaGGTGTATTTGGAAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ETKKHTTDKPAHCGPHTSGILIL*VYLEKK Trigger: CTTCTTTTCCAAATACACTCACAGTATCAGAATACC...TGACGTGTGTGGCCCACAGTGCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR CCA 90 bp | AAGAGACTAAGAAGCACACCACTGACAAACCAGCGCACTGTGGGCCACACACGTATAGCCTATGTTTGCTaGTGCGAACTTGATAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: KRLRSTPLTNQRTVGHTRIAYVC*CELDSC Trigger: ACAACTATCAAGTTCGCACCAGCAAACATAGGCTAT...ACGTGTGTGGCCCACAGTGCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR TCA 90 bp | AAGAGACTAAGAAGCACACCACTGACAAACCAGCGCACTGTGGGCCACACACGTGAGAGTCTTAGTAAATaGAACCGTGGTATTCTGATA | + |
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Preference number: 4 (lower is better) Translates to: KRLRSTPLTNQRTVGHTRESLSK*NRGILI Trigger: TATCAGAATACCACGGTTTCATTTACTAAGACTCTC...ACGTGTGTGGCCCACAGTGCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR TCA 90 bp | TGTCCAAGAAGCTACAAGAACAAAACACTAGGGCTTCAAGGAGACATTTTTATTCCCACACGGCCAGGATaGTGTAGTCGTTGGTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: CPRSYKNKTLGLQGDIFIPTRPG*CSRWSG Trigger: TCCAGACCAACGACTACATCATCCTGGCCGTGTGGG...AATAAAAATGTCTCCTTGAAGCCCTAGTGTTTTGTTCTTGTAGCTTCTTGGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR GCA 90 bp | ATCCCTAAACTTCTACACACAAAGCGAATAAATACCCACTGCCTGCCTCCCCTCGAAGAAAGGTCACATTaGTTGAAATATGGCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: IPKLLHTKRINTHCLPPLEERSH*LKYGAG Trigger: TCCTGCGCCATATTTCAAGCAATGTGACCTTTCTTC...GAGGGGAGGCAGGCAGTGGGTATTTATTCGCTTTGTGTGTAGAAGTTTAGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR GCA 90 bp | ATCCCTAAACTTCTACACACAAAGCGAATAAATACCCACTGCCTGCCTCCCCTCTGCATAGCCTATGTTTaGTGGTGCGAACTTGATAGT | + |
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Preference number: 4 (lower is better) Translates to: IPKLLHTKRINTHCLPPLCIAYV*WCELDS Trigger: ACTATCAAGTTCGCACCAGCAAACATAGGCTATGCA...GAGGGGAGGCAGGCAGTGGGTATTTATTCGCTTTGTGTGTAGAAGTTTAGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR CCA 90 bp | AAGAGACTAAGAAGCACACCACTGACAAACCAGCGCACTGTGGGCCACACACGTAGTCCAAATAGAGGTTaGGGTCAATATCTAAATCAA | + |
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Preference number: 4 (lower is better) Translates to: KRLRSTPLTNQRTVGHTRSPNRG*GQYLNQ Trigger: TTGATTTAGATATTGACCCCAACCTCTATTTGGACT...ACGTGTGTGGCCCACAGTGCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR TCA 90 bp | GCTATAGTCATTGCTGTGAAGAGACTAAGAAGCACACCACTGACAAACCAGCGCCTTTCTCTTCGAATCTaGAGTGTAATTCCACTGACA | + |
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Preference number: 4 (lower is better) Translates to: AIVIAVKRLRSTPLTNQRLSLRI*SVIPLT Trigger: TGTCAGTGGAATTACACTTCAGATTCGAAGAGAAAG...GCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTTCACAGCAATGACTATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR TCA 90 bp | CCAAAGAAACAAACGAAGAGCCCAAGCAGGGCAACCAAAGTGGAGAACACTTTCGTAGCCCTTAGTAAATaGAACCGTGGTATTCTGATA | + |
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Preference number: 4 (lower is better) Translates to: PKKQTKSPSRATKVENTFVALSK*NRGILI Trigger: TATCAGAATACCACGGTTTCATTTACTAAGGGCTAC...GAAAGTGTTCTCCACTTTGGTTGCCCTGCTTGGGCTCTTCGTTTGTTTCTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127529.2 |
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| CDS-3UTR CCA 90 bp | TGTCCAAGAAGCTACAAGAACAAAACACTAGGGCTTCAAGGAGACATTTTTATTTGCAGCCTCCAGGAATaGGATCTCTTTCTGAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: CPRSYKNKTLGLQGDIFICSLQE*DLFLSR Trigger: CCTACTCAGAAAGAGATCCCATTCCTGGAGGCTGCA...AATAAAAATGTCTCCTTGAAGCCCTAGTGTTTTGTTCTTGTAGCTTCTTGGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR TCA 90 bp | TGTCCAAGAAGCTACAAGAACAAAACACTAGGGCTTCAAGGAGACATTTTTATTGAAACCGTGGTATTCTaGTACTGTGAGTGTATTTGG | + |
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Preference number: 4 (lower is better) Translates to: CPRSYKNKTLGLQGDIFIETVVF*YCECIW Trigger: CCAAATACACTCACAGTATCAGAATACCACGGTTTC...AATAAAAATGTCTCCTTGAAGCCCTAGTGTTTTGTTCTTGTAGCTTCTTGGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS TCA 90 bp | ACACGAGGAAGCCCAGCACGAGTCCCACACACAGCATGCAGAGTGTaGGGATCCCGAATCGCCACCATGAAGCCACCAGGAGGAGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: TRGSPARVPHTACRV*GSRIATMKPPGGGH Trigger: GTGGCCTCCTCCTGGTGGCTTCATGGTGGCGATTCGGGATCCTCACACTCTGCATGCTGTGTGTGGGACTCGTGCTGGGCTTCCTCGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS TCA 90 bp | AGGGTGTCCTCTCTCCAGCCGGCTGTTCCTTCTGGAAGAGCTCTTTaGTCCGAGCAACCCGACCATAAAGCCTCTCTCTCAGGGGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: RVSSLQPAVPSGRAL*SEQPDHKASLSGEG Trigger: TCCCTCCCCTGAGAGAGAGGCTTTATGGTCGGGTTGCTCGGATCAAAGAGCTCTTCCAGAAGGAACAGCCGGCTGGAGAGAGGACACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS CCA 90 bp | CAACCCGACCATAAAGCCTCTCTCTCAGGGGAGGGATGTGATGGCTaGGGTCCAGGATGTTGGTCACTCTGCGTTCTCTCTCTTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: QPDHKASLSGEGCDG*GPGCWSLCVLSLAS Trigger: GGAAGCAAGAGAGAGAACGCAGAGTGACCAACATCCTGGACCCCAGCCATCACATCCCTCCCCTGAGAGAGAGGCTTTATGGTCGGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR CAA 90 bp | AAGAGACTAAGAAGCACACCACTGACAAACCAGCGCACTGTGGGCCACACACGTGAAAGGTCACATTGCTaGAAATATGGCGCAGGACGG | + |
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Preference number: 5 (lower is better) Translates to: KRLRSTPLTNQRTVGHTRERSHC*KYGAGR Trigger: CCGTCCTGCGCCATATTTCAAGCAATGTGACCTTTC...ACGTGTGTGGCCCACAGTGCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR CAA 90 bp | ATCCCTAAACTTCTACACACAAAGCGAATAAATACCCACTGCCTGCCTCCCCTCACGCTTTGGACAGGCTaGGTGTCTCCCGTCTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: IPKLLHTKRINTHCLPPLTLWTG*VSPVSK Trigger: CTTGGAGACGGGAGACACCAAGCCTGTCCAAAGCGT...GAGGGGAGGCAGGCAGTGGGTATTTATTCGCTTTGTGTGTAGAAGTTTAGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR CAA 90 bp | GCTATAGTCATTGCTGTGAAGAGACTAAGAAGCACACCACTGACAAACCAGCGCCCTCGGAAATCTGTGTaGAGAGCTCTCCTGAGGACG | + |
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Preference number: 5 (lower is better) Translates to: AIVIAVKRLRSTPLTNQRPRKSV*RALLRT Trigger: CGTCCTCAGGAGAGCTCTCAACACAGATTTCCGAGG...GCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTTCACAGCAATGACTATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS TCA 90 bp | AGAACACTCCATCATCATGAAAAACATTTAGGTTTCCCAGAGGCGTaGAGAAAGTCCCAGAAGACACGAGGAAGCCCAGCACGAGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: RTLHHHEKHLGFPEA*RKSQKTRGSPARVP Trigger: TGGGACTCGTGCTGGGCTTCCTCGTGTCTTCTGGGACTTTCTTCACGCCTCTGGGAAACCTAAATGTTTTTCATGATGATGGAGTGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR CAA 90 bp | GCTATAGTCATTGCTGTGAAGAGACTAAGAAGCACACCACTGACAAACCAGCGCTCCTGCGGAGAGGACTaGCTGAGCACAAAGTATGTA | + |
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Preference number: 5 (lower is better) Translates to: AIVIAVKRLRSTPLTNQRSCGED*LSTKYV Trigger: TACATACTTTGTGCTCAGCAAGTCCTCTCCGCAGGA...GCGCTGGTTTGTCAGTGGTGTGCTTCTTAGTCTCTTCACAGCAATGACTATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR CAA 90 bp | AATCTGTGTCCAAAGAAACAAACGAAGAGCCCAAGCAGGGCAACCAAAGTGGAGTCCTGCGGAGAGGACTaGCTGAGCACAAAGTATGTA | + |
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Preference number: 5 (lower is better) Translates to: NLCPKKQTKSPSRATKVESCGED*LSTKYV Trigger: TACATACTTTGTGCTCAGCAAGTCCTCTCCGCAGGA...CTCCACTTTGGTTGCCCTGCTTGGGCTCTTCGTTTGTTTCTTTGGACACAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127529.2 |
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| CDS-3UTR CAA 90 bp | GGGCACATAAGCAGCAGAAGTATTGAGGGACGGATCCCAAACGATGACATTATAGAAAGGTCACATTGCTaGAAATATGGCGCAGGACGG | + |
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Preference number: 5 (lower is better) Translates to: GHISSRSIEGRIPNDDIIERSHC*KYGAGR Trigger: CCGTCCTGCGCCATATTTCAAGCAATGTGACCTTTC...TATAATGTCATCGTTTGGGATCCGTCCCTCAATACTTCTGCTGCTTATGTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127529.2 |
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| CDS GCA 90 bp | TATTCTGATACTGTGAGTGTATTTGGAAAAGAAGAAAGGTCACATTaGTTGAAATATGGCGCAGGACGGCCTCCTGCGGAGAGGACTTGC | + |
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Preference number: 5 (lower is better) Translates to: YSDTVSVFGKEERSH*LKYGAGRPPAERTC Trigger: GCAAGTCCTCTCCGCAGGAGGCCGTCCTGCGCCATATTTCAAGCAATGTGACCTTTCTTCTTTTCCAAATACACTCACAGTATCAGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037709.16 ENSMUST00000127529.2 |
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| CDS TCA 90 bp | GACGTGCTGGGAAGGAGAGTCTTAGTAAATGAAACCGTGGTATTCTaGTACTGTGAGTGTATTTGGAAAAGAAGAAAGGTCACATTGCTT | + |
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Preference number: 5 (lower is better) Translates to: DVLGRRVLVNETVVF*YCECIWKRRKVTLL Trigger: AAGCAATGTGACCTTTCTTCTTTTCCAAATACACTCACAGTATCAGAATACCACGGTTTCATTTACTAAGACTCTCCTTCCCAGCACGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR CAA 90 bp | TGTCCAAGAAGCTACAAGAACAAAACACTAGGGCTTCAAGGAGACATTTTTATTATTATAGATGACTCCTaGTCCCGGGAGGGAAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: CPRSYKNKTLGLQGDIFIIIDDS*SREGRE Trigger: TTCTCTTCCCTCCCGGGACAAGGAGTCATCTATAAT...AATAAAAATGTCTCCTTGAAGCCCTAGTGTTTTGTTCTTGTAGCTTCTTGGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR CAA 90 bp | TGTCCAAGAAGCTACAAGAACAAAACACTAGGGCTTCAAGGAGACATTTTTATTAGAAGAAAGGTCACATaGCTTGAAATATGGCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: CPRSYKNKTLGLQGDIFIRRKVT*LEIWRR Trigger: CCTGCGCCATATTTCAAGCAATGTGACCTTTCTTCT...AATAAAAATGTCTCCTTGAAGCCCTAGTGTTTTGTTCTTGTAGCTTCTTGGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS-3UTR CAA 90 bp | TGTCCAAGAAGCTACAAGAACAAAACACTAGGGCTTCAAGGAGACATTTTTATTAAATCAAACTCCAAATaGCAGCCTCCAGGAATGGGA | + |
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Preference number: 5 (lower is better) Translates to: CPRSYKNKTLGLQGDIFIKSNSK*QPPGMG Trigger: TCCCATTCCTGGAGGCTGCAATTTGGAGTTTGATTT...AATAAAAATGTCTCCTTGAAGCCCTAGTGTTTTGTTCTTGTAGCTTCTTGGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS TCA 72 bp | AGCCCAGCACGAGTCCCACACACAGCATGCAGAGTGTaGGGATCCCGAATCGCCACCATGAAGCCACCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SPARVPHTACRV*GSRIATMKPPG Trigger: TCCTGGTGGCTTCATGGTGGCGATTCGGGATCCTCACACTCTGCATGCTGTGTGTGGGACTCGTGCTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS CCA 72 bp | CATAAAGCCTCTCTCTCAGGGGAGGGATGTGATGGCTaGGGTCCAGGATGTTGGTCACTCTGCGTTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: HKASLSGEGCDG*GPGCWSLCVLS Trigger: AGAGAGAACGCAGAGTGACCAACATCCTGGACCCCAGCCATCACATCCCTCCCCTGAGAGAGAGGCTTTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS TCA 72 bp | CTCCAAATTGCAGCCTCCAGGAATGGGATCTCTTTCTaGGTAGGAGAGCGTAAGGGCCACGCTTTGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: LQIAASRNGISF*VGERKGHALDR Trigger: CCTGTCCAAAGCGTGGCCCTTACGCTCTCCTACTCAGAAAGAGATCCCATTCCTGGAGGCTGCAATTTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS TCA 72 bp | TCTCTCCAGCCGGCTGTTCCTTCTGGAAGAGCTCTTTaGTCCGAGCAACCCGACCATAAAGCCTCTCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SLQPAVPSGRAL*SEQPDHKASLS Trigger: TGAGAGAGAGGCTTTATGGTCGGGTTGCTCGGATCAAAGAGCTCTTCCAGAAGGAACAGCCGGCTGGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS GCA 72 bp | CTTGGTGTCTCCCGTCTCCAAGTACCAAGTACACACTaGCTGCTCCGGTCTAAGAATGAAGACCAGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LGVSRLQVPSTH*LLRSKNEDQPS Trigger: AGAGGGCTGGTCTTCATTCTTAGACCGGAGCAGGCAGTGTGTACTTGGTACTTGGAGACGGGAGACACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS GCA 72 bp | GGTGCTCACATCACACGGTGGGGGCTCTGTAGCCCTTaGATAGCCTATGTTTGCTGGTGCGAACTTGATAGT | + |
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Preference number: 6 (lower is better) Translates to: GAHITRWGLCSP*IAYVCWCELDS Trigger: ACTATCAAGTTCGCACCAGCAAACATAGGCTATGCAAGGGCTACAGAGCCCCCACCGTGTGATGTGAGCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS GCA 72 bp | GGATGTGATGGCTGGGGTCCAGGATGTTGGTCACTCTaGGTTCTCTCTCTTGCTTCCATAGCTTGTAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: GCDGWGPGCWSL*VLSLASIACRG Trigger: ACCCCTACAAGCTATGGAAGCAAGAGAGAGAACGCAGAGTGACCAACATCCTGGACCCCAGCCATCACATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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| CDS CAA 72 bp | GAAATATGGCGCAGGACGGCCTCCTGCGGAGAGGACTaGCTGAGCACAAAGTATGTAAATTTTCCCACAGAA | + |
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Preference number: 6 (lower is better) Translates to: EIWRRTASCGED*LSTKYVNFPTE Trigger: TTCTGTGGGAAAATTTACATACTTTGTGCTCAGCAAGTCCTCTCCGCAGGAGGCCGTCCTGCGCCATATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037709.16 ENSMUST00000127529.2 |
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| CDS GCA 72 bp | AGAGGTTGGGGTCAATATCTAAATCAAACTCCAAATTaGAGCCTCCAGGAATGGGATCTCTTTCTGAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: RGWGQYLNQTPN*SLQEWDLFLSR Trigger: CCTACTCAGAAAGAGATCCCATTCCTGGAGGCTGCAATTTGGAGTTTGATTTAGATATTGACCCCAACCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037709.16 |
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