Pregenerated sensors for TM7SF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024799Ensembl transcript IDs: ENSMUST00000113543.9, ENSMUST00000160417.8, ENSMUST00000161090.8, ENSMUST00000161528.2, ENSMUST00000162575.8
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCTTGCAGTACTCCTGCCAGGCACGGCCATACTTTTGGAGGCACTaGTGCTCATCTCTGGCCTCGCGGTGCACCAGCAGTGCAGTGAAG | + |
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Preference number: 1 (lower is better) Translates to: RLQYSCQARPYFWRH*CSSLASRCTSSAVK Trigger: CTTCACTGCACTGCTGGTGCACCGCGAGGCCAGAGATGAGCAGCAGTGCCTCCAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCAAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR GCA 90 bp | ACCAGCCACATAGCCAGGGAAGGACTCCCCCGAAGCTCTGCCTCCTaGATCAGCAGGGCCAGGTTAATGAAAACCCAGCCAATGAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: TSHIAREGLPRSSAS*ISRARLMKTQPMRP Trigger: TGGCCTCATTGGCTGGGTTTTCATTAACCTGGCCCTGCTGATGCAGGAGGCAGAGCTTCGGGGGAGTCCTTCCCTGGCTATGTGGCTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR GCA 90 bp | GCCATTGACCAGCCACATAGCCAGGGAAGGACTCCCCCGAAGCTCTaGCTCCTGCATCAGCAGGGCCAGGTTAATGAAAACCCAGCCAAT | + |
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Preference number: 1 (lower is better) Translates to: AIDQPHSQGRTPPKL*LLHQQGQVNENPAN Trigger: ATTGGCTGGGTTTTCATTAACCTGGCCCTGCTGATGCAGGAGGCAGAGCTTCGGGGGAGTCCTTCCCTGGCTATGTGGCTGGTCAATGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR CCA 90 bp | CTTAAGGAGGCAGATGAGCAAGGCCATGGGCAACCCCAGAGGCTGTaGATGGTACAACAGGAACTGGGCCTGCAGGCTGTAGGTGAATGG | + |
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Preference number: 1 (lower is better) Translates to: LKEADEQGHGQPQRL*MVQQELGLQAVGEW Trigger: CCATTCACCTACAGCCTGCAGGCCCAGTTCCTGTTGTACCATCCACAGCCTCTGGGGTTGCCCATGGCCTTGCTCATCTGCCTCCTTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR CCA 90 bp | AGGACAGACTCCTCATACCAGAGGGCATCACCCACATACAGCAACTaGAAGCCATTGACCAGCCACATAGCCAGGGAAGGACTCCCCCGA | + |
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Preference number: 1 (lower is better) Translates to: RTDSSYQRASPTYSN*KPLTSHIAREGLPR Trigger: TCGGGGGAGTCCTTCCCTGGCTATGTGGCTGGTCAATGGCTTCCAGTTGCTGTATGTGGGTGATGCCCTCTGGTATGAGGAGTCTGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR TCA 90 bp | TGCTTTCAACCTCTTAGGTGGACCTGCTTCAGTAGACATAGGGTATaGTTCGGTAAGGCACACGCTTGCAGTACTCCTGCCAGGCACGGC | + |
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Preference number: 1 (lower is better) Translates to: CFQPLRWTCFSRHRV*FGKAHACSTPARHG Trigger: GCCGTGCCTGGCAGGAGTACTGCAAGCGTGTGCCTTACCGAATCATACCCTATGTCTACTGAAGCAGGTCCACCTAAGAGGTTGAAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| 3UTR GCA 90 bp | TCAACAGGGAAAAATACTTTCCTTCTGGAAGCAGTGGCTTCCTCTTaGTTTCAACCTCTTAGGTGGACCTGCTTCAGTAGACATAGGGTA | + |
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Preference number: 1 (lower is better) Translates to: STGKNTFLLEAVASS*FQPLRWTCFSRHRV Trigger: TACCCTATGTCTACTGAAGCAGGTCCACCTAAGAGGTTGAAAGCAAGAGGAAGCCACTGCTTCCAGAAGGAAAGTATTTTTCCCTGTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| 3UTR-3UTR GCA 90 bp | GAGATCTCCCAGGTAGTTGGGGTGTCGAACCATACCCCACCACCCAGACACCAGCGAAGCTCTGCCTCCTaGATCAGCAGGGCCAGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: EISQVVGVSNHTPPPRHQRSSAS*ISRARL Trigger: TAACCTGGCCCTGCTGATGCAGGAGGCAGAGCTTCG...CTGGTGTCTGGGTGGTGGGGTATGGTTCGACACCCCAACTACCTGGGAGATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR CAA 90 bp | TCCTCATACCAGAGGGCATCACCCACATACAGCAACTGGAAGCCATaGACCAGCCACATAGCCAGGGAAGGACTCCCCCGAAGCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: SSYQRASPTYSNWKP*TSHIAREGLPRSSA Trigger: GGCAGAGCTTCGGGGGAGTCCTTCCCTGGCTATGTGGCTGGTCAATGGCTTCCAGTTGCTGTATGTGGGTGATGCCCTCTGGTATGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR-3UTR TCA 90 bp | GAGATCTCCCAGGTAGTTGGGGTGTCGAACCATACCCCACCACCCAGACACCAGTTATGTCCATGGTGGTaGGGACAGACTCCTCATACC | + |
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Preference number: 2 (lower is better) Translates to: EISQVVGVSNHTPPPRHQLCPWW*GQTPHT Trigger: GGTATGAGGAGTCTGTCCTCACCACCATGGACATAA...CTGGTGTCTGGGTGGTGGGGTATGGTTCGACACCCCAACTACCTGGGAGATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR-3UTR GCA 90 bp | GCTAGCCCACTCTGCTCTTCTCCTGGCCCAAGTCCAGCAGAATTAAGTCCAGCAAATGCTAGCCCACTCTaGTCTTCTCCTGGCCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: ASPLCSSPGPSPAELSPANASPL*SSPGPS Trigger: ACTTGGGCCAGGAGAAGAGCAGAGTGGGCTAGCATT...TGCTGGACTTAATTCTGCTGGACTTGGGCCAGGAGAAGAGCAGAGTGGGCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160417.8 ENSMUST00000161528.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCGGGATGGTCTCAAGACCAGCCACGCTGGGGTCAGAAGGATTCTTCCTGAACAACCCCAGAGGCTGTaGATGGTACAACAGGAACTG | + |
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Preference number: 2 (lower is better) Translates to: SRDGLKTSHAGVRRILPEQPQRL*MVQQEL Trigger: CAGTTCCTGTTGTACCATCCACAGCCTCTGGGGTTG...TTCAGGAAGAATCCTTCTGACCCCAGCGTGGCTGGTCTTGAGACCATCCCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR CAA 90 bp | CAGCATACCCAGCCAATGAGGCCAGGTCTCAGCTCACAGAAATATTaGAAGTCAAAGGAACCGAGGCGAGGGTTCAGCTCCCGTCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: QHTQPMRPGLSSQKY*KSKEPRRGFSSRPR Trigger: TCTTGGACGGGAGCTGAACCCTCGCCTCGGTTCCTTTGACTTCAAATATTTCTGTGAGCTGAGACCTGGCCTCATTGGCTGGGTATGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161528.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAATGATTGCTGCCCACCCAGCAATGCTAGCCCACTCTGCTCTTCTCCTGGCACTCTGCTCTTCTCCTaGCCCAAGTCCAGCAGAATT | + |
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Preference number: 2 (lower is better) Translates to: MNDCCPPSNASPLCSSPGTLLFS*PKSSRI Trigger: AATTCTGCTGGACTTGGGCCAGGAGAAGAGCAGAGT...GCCAGGAGAAGAGCAGAGTGGGCTAGCATTGCTGGGTGGGCAGCAATCATTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160417.8 ENSMUST00000161528.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTACTCCTGCCAGGCACGGCCATACTTTTGGAGGCACTGCTGCTCATCTCCTCCAAAGACCAGCATaGAGCCAAAACCATCATGTA | + |
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Preference number: 2 (lower is better) Translates to: CSTPARHGHTFGGTAAHLLQRPA*SQNHHV Trigger: TACATGATGGTTTTGGCTTCATGCTGGTCTTTGGAG...GAGATGAGCAGCAGTGCCTCCAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR CAA 90 bp | ATGAAAACCCAGCCAATGAGGCCAGGTCTCAGCTCACAGAAATATTaGAAGTCAAAGGAACCGAGGCGAGGGTTCAGCTCCCGTCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: MKTQPMRPGLSSQKY*KSKEPRRGFSSRPR Trigger: TCTTGGACGGGAGCTGAACCCTCGCCTCGGTTCCTTTGACTTCAAATATTTCTGTGAGCTGAGACCTGGCCTCATTGGCTGGGTTTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTCCTCTTGCTTTCAACCTCTTAGGTGGACCTGCTTCAGTAGACATAGGGGCAGTGGCTTCCTCTTaGTTTCAACCTCTTAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: WLPLAFNLLGGPASVDIGAVASS*FQPLRW Trigger: CCACCTAAGAGGTTGAAAGCAAGAGGAAGCCACTGC...CCCTATGTCTACTGAAGCAGGTCCACCTAAGAGGTTGAAAGCAAGAGGAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| 3UTR-3UTR TCA 90 bp | ATATTTGAAGTCAAAGGAACCGAGGCGAGGGTTCAGCTCCCGTCCAAGAAAGAAATACATGGAATTTCCTaGGTTTCCCCCAGGAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: IFEVKGTEARVQLPSKKEIHGIS*VSPRSQ Trigger: CTGGCTCCTGGGGGAAACTCAGGAAATTCCATGTAT...TTCTTTCTTGGACGGGAGCTGAACCCTCGCCTCGGTTCCTTTGACTTCAAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161090.8 ENSMUST00000161528.2 |
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| 3UTR GCA 72 bp | TCCTGCCAGGCACGGCCATACTTTTGGAGGCACTGCTaGTCATCTCTGGCCTCGCGGTGCACCAGCAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: SCQARPYFWRHC*SSLASRCTSSA Trigger: TGCACTGCTGGTGCACCGCGAGGCCAGAGATGAGCAGCAGTGCCTCCAAAAGTATGGCCGTGCCTGGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR CCA 72 bp | CGCTTGCAGTACTCCTGCCAGGCACGGCCATACTTTTaGAGGCACTGCTGCTCATCTCTGGCCTCGCGGTGC | + |
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Preference number: 3 (lower is better) Translates to: RLQYSCQARPYF*RHCCSSLASRC Trigger: GCACCGCGAGGCCAGAGATGAGCAGCAGTGCCTCCAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCAAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR GCA 72 bp | TACTCCTGCCAGGCACGGCCATACTTTTGGAGGCACTaGTGCTCATCTCTGGCCTCGCGGTGCACCAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: YSCQARPYFWRH*CSSLASRCTSS Trigger: ACTGCTGGTGCACCGCGAGGCCAGAGATGAGCAGCAGTGCCTCCAAAAGTATGGCCGTGCCTGGCAGGAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR GCA 72 bp | ATAGCCAGGGAAGGACTCCCCCGAAGCTCTGCCTCCTaGATCAGCAGGGCCAGGTTAATGAAAACCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: IAREGLPRSSAS*ISRARLMKTQP Trigger: TGGCTGGGTTTTCATTAACCTGGCCCTGCTGATGCAGGAGGCAGAGCTTCGGGGGAGTCCTTCCCTGGCTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR GCA 72 bp | CAGCCACATAGCCAGGGAAGGACTCCCCCGAAGCTCTaGCTCCTGCATCAGCAGGGCCAGGTTAATGAAAAC | + |
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Preference number: 3 (lower is better) Translates to: QPHSQGRTPPKL*LLHQQGQVNEN Trigger: GTTTTCATTAACCTGGCCCTGCTGATGCAGGAGGCAGAGCTTCGGGGGAGTCCTTCCCTGGCTATGTGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR CCA 72 bp | GAGGGTTCAGCTCCCGTCCAAGAAAGAAGTCATACATaGAATTTCCTGAGTTTCCCCCAGGAGCCAGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: EGSAPVQERSHT*NFLSFPQEPGL Trigger: CAGCCCTGGCTCCTGGGGGAAACTCAGGAAATTCCATGTATGACTTCTTTCTTGGACGGGAGCTGAACCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161090.8 ENSMUST00000161528.2 |
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| 3UTR TCA 72 bp | CCTCTTAGGTGGACCTGCTTCAGTAGACATAGGGTATaGTTCGGTAAGGCACACGCTTGCAGTACTCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: PLRWTCFSRHRV*FGKAHACSTPA Trigger: GGCAGGAGTACTGCAAGCGTGTGCCTTACCGAATCATACCCTATGTCTACTGAAGCAGGTCCACCTAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| 3UTR TCA 72 bp | GATGGTACAACAGGAACTGGGCCTGCAGGCTGTAGGTaGATGGTACCCAAGCTAGATCTCCAAAGACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: DGTTGTGPAGCR*MVPKLDLQRPA Trigger: TGCTGGTCTTTGGAGATCTAGCTTGGGTACCATTCACCTACAGCCTGCAGGCCCAGTTCCTGTTGTACCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| 3UTR GCA 72 bp | AATGATTGCTGCCCACCCAGCAATGCTAGCCCACTCTaGTCTTCTCCTGGCCCAAGTCCAGCAGAATTAAGT | + |
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Preference number: 3 (lower is better) Translates to: NDCCPPSNASPL*SSPGPSPAELS Trigger: ACTTAATTCTGCTGGACTTGGGCCAGGAGAAGAGCAGAGTGGGCTAGCATTGCTGGGTGGGCAGCAATCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160417.8 ENSMUST00000161528.2 |
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| CDS-3UTR TCA 90 bp | CACCCAGCAATGCTAGCCCACTCTGCTCTTCTCCTGGCCCAAGTCCAGCAGAATCCCAGGAGCCAGGGCTaGGGCAGGAGCTACCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: HPAMLAHSALLLAQVQQNPRSQG*GRSYQS Trigger: GCTTTGGTAGCTCCTGCCTCAGCCCTGGCTCCTGGG...ATTCTGCTGGACTTGGGCCAGGAGAAGAGCAGAGTGGGCTAGCATTGCTGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160417.8 |
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| CDS-3UTR TCA 90 bp | GGTAAGGCACACGCTTGCAGTACTCCTGCCAGGCACGGCCATACTTTTGGAGGCGCAGGCCGAGCCAGATaGACAATAGCAGCAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GKAHACSTPARHGHTFGGAGRAR*TIAAEP Trigger: GGGCTCTGCTGCTATTGTTCATCTGGCTCGGCCTGC...GCCTCCAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCAAGCGTGTGCCTTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113543.9 ENSMUST00000161090.8 |
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| CDS-3UTR CCA 90 bp | CCCAGCAATGCTAGCCCACTCTGCTCTTCTCCTGGCCCAAGTCCAGCAGAATTAGCCGCCAGGAGCAGGTaGAACATGGTGGCAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PSNASPLCSSPGPSPAELAARSR*NMVAGS Trigger: GCTGCCTGCCACCATGTTCCACCTGCTCCTGGCGGC...TAATTCTGCTGGACTTGGGCCAGGAGAAGAGCAGAGTGGGCTAGCATTGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161528.2 |
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| CDS-3UTR CCA 90 bp | GGCACACGCTTGCAGTACTCCTGCCAGGCACGGCCATACTTTTGGAGGCACTGCCCCAGAGGCTGTGGATaGTACAACAGGAACTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GTRLQYSCQARPYFWRHCPRGCG*YNRNWA Trigger: GGCCCAGTTCCTGTTGTACCATCCACAGCCTCTGGG...GCAGTGCCTCCAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCAAGCGTGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR GCA 90 bp | CCACCCAGCAATGCTAGCCCACTCTGCTCTTCTCCTGGCCCAAGTCCAGCAGAATTCGGCCACCTTGCGTaGAGGCAGCAAATAGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: PPSNASPLCSSPGPSPAEFGHLA*RQQIER Trigger: GCGCTCTATTTGCTGCCTGCACGCAAGGTGGCCGAA...TTCTGCTGGACTTGGGCCAGGAGAAGAGCAGAGTGGGCTAGCATTGCTGGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161528.2 |
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| CDS-3UTR GCA 90 bp | GGCACACGCTTGCAGTACTCCTGCCAGGCACGGCCATACTTTTGGAGGCACTGCGCGGTGCACCAGCAGTaGAGTGAAGTAGAGGACGTA | + |
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Preference number: 4 (lower is better) Translates to: GTRLQYSCQARPYFWRHCAVHQQ*SEVEDV Trigger: TACGTCCTCTACTTCACTGCACTGCTGGTGCACCGC...GCAGTGCCTCCAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCAAGCGTGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR CCA 90 bp | GGTAAGGCACACGCTTGCAGTACTCCTGCCAGGCACGGCCATACTTTTGGAGGCAATTCCAGTGGGGCCTaGGAGGCCTCACGAGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: GKAHACSTPARHGHTFGGNSSGA*EASREV Trigger: GACTTCTCGTGAGGCCTCCCAGGCCCCACTGGAATT...GCCTCCAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCAAGCGTGTGCCTTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113543.9 ENSMUST00000161090.8 |
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| CDS-3UTR TCA 90 bp | ATGATTGCTGCCCACCCAGCAATGCTAGCCCACTCTGCTCTTCTCCTGGCCCAAAGCATACCCAGCCAATaGGGCCAGGTCTCAGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: MIAAHPAMLAHSALLLAQSIPSQ*GQVSAH Trigger: GTGAGCTGAGACCTGGCCTCATTGGCTGGGTATGCT...TTGGGCCAGGAGAAGAGCAGAGTGGGCTAGCATTGCTGGGTGGGCAGCAATCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160417.8 |
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| CDS-3UTR GCA 90 bp | GAAGCCATTGACCAGCCACATAGCCAGGGAAGGACTCCCCCGAAGCTCTGCCTCAGAGCCTGGAAGCCTTaGGTGCAGGCAGCAAATAGA | + |
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Preference number: 4 (lower is better) Translates to: EAIDQPHSQGRTPPKLCLRAWKP*VQAANR Trigger: TCTATTTGCTGCCTGCACGCAAGGCTTCCAGGCTCT...GAGGCAGAGCTTCGGGGGAGTCCTTCCCTGGCTATGTGGCTGGTCAATGGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| CDS-3UTR CCA 90 bp | GGTAAGGCACACGCTTGCAGTACTCCTGCCAGGCACGGCCATACTTTTGGAGGCGCAGGTGGAACATGGTaGCAGGCAGCAGGATCAGTA | + |
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Preference number: 4 (lower is better) Translates to: GKAHACSTPARHGHTFGGAGGTW*QAAGSV Trigger: TACTGATCCTGCTGCCTGCCACCATGTTCCACCTGC...GCCTCCAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCAAGCGTGTGCCTTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113543.9 ENSMUST00000161090.8 |
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| CDS-3UTR CCA 90 bp | AGGCCAGGTCTCAGCTCACAGAAATATTTGAAGTCAAAGGAACCGAGGCGAGGGGCCGCCAGGAGCAGGTaGAACATGGTGGCAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RPGLSSQKYLKSKEPRRGAARSR*NMVAGS Trigger: GCTGCCTGCCACCATGTTCCACCTGCTCCTGGCGGC...CCCTCGCCTCGGTTCCTTTGACTTCAAATATTTCTGTGAGCTGAGACCTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161090.8 ENSMUST00000161528.2 |
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| CDS-3UTR CCA 90 bp | CACACGCTTGCAGTACTCCTGCCAGGCACGGCCATACTTTTGGAGGCACTGCTGCAACCCCAGAGGCTGTaGATGGTACAACAGGAACTG | + |
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Preference number: 4 (lower is better) Translates to: HTLAVLLPGTAILLEALLQPQRL*MVQQEL Trigger: CAGTTCCTGTTGTACCATCCACAGCCTCTGGGGTTG...CAGCAGTGCCTCCAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCAAGCGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR TCA 90 bp | GTAAGGCACACGCTTGCAGTACTCCTGCCAGGCACGGCCATACTTTTGGAGGCACCTGCAGGCTGTAGGTaGATGGTACCCAAGCTAGAT | + |
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Preference number: 4 (lower is better) Translates to: VRHTLAVLLPGTAILLEAPAGCR*MVPKLD Trigger: ATCTAGCTTGGGTACCATTCACCTACAGCCTGCAGG...TGCCTCCAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCAAGCGTGTGCCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR GCA 90 bp | GCAGTGGCTTCCTCTTGCTTTCAACCTCTTAGGTGGACCTGCTTCAGTAGACATACTCCCCCGAAGCTCTaGCTCCTGCATCAGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: AVASSCFQPLRWTCFSRHTPPKL*LLHQQG Trigger: GCCCTGCTGATGCAGGAGGCAGAGCTTCGGGGGAGT...ATGTCTACTGAAGCAGGTCCACCTAAGAGGTTGAAAGCAAGAGGAAGCCACTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR CCA 90 bp | GGTAAGGCACACGCTTGCAGTACTCCTGCCAGGCACGGCCATACTTTTGGAGGCCTGAATGTGTTTTTCTaGGAGTTGGCCCCTCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GKAHACSTPARHGHTFGGLNVFF*ELAPRK Trigger: CTTCCGAGGGGCCAACTCCCAGAAAAACACATTCAG...GCCTCCAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCAAGCGTGTGCCTTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR CCA 90 bp | GATTCGGTAAGGCACACGCTTGCAGTACTCCTGCCAGGCACGGCCATACTTTTGCAAGACCAGCCACGCTaGGGTCAGAAGGATTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: DSVRHTLAVLLPGTAILLQDQPR*GQKDSS Trigger: GGAAGAATCCTTCTGACCCCAGCGTGGCTGGTCTTG...CAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCAAGCGTGTGCCTTACCGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR CCA 90 bp | GATTCGGTAAGGCACACGCTTGCAGTACTCCTGCCAGGCACGGCCATACTTTTGGATCTCCCAGGTAGTTaGGGTGTCGAACCATACCCC | + |
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Preference number: 4 (lower is better) Translates to: DSVRHTLAVLLPGTAILLDLPGS*GVEPYP Trigger: GGGGTATGGTTCGACACCCCAACTACCTGGGAGATC...CAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCAAGCGTGTGCCTTACCGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR TCA 90 bp | TCACAGAAATATTTGAAGTCAAAGGAACCGAGGCGAGGGTTCAGCTCCCGTCCAGCAGGCCGAGCCAGATaGACAATAGCAGCAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SQKYLKSKEPRRGFSSRPAGRAR*TIAAEP Trigger: GGGCTCTGCTGCTATTGTTCATCTGGCTCGGCCTGC...TGGACGGGAGCTGAACCCTCGCCTCGGTTCCTTTGACTTCAAATATTTCTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161090.8 ENSMUST00000161528.2 |
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| CDS-3UTR TCA 90 bp | GCTTTCAACCTCTTAGGTGGACCTGCTTCAGTAGACATAGGGTATGATTCGGTACCCAGGAGCCAGGGCTaGGGCAGGAGCTACCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: AFNLLGGPASVDIGYDSVPRSQG*GRSYQS Trigger: GCTTTGGTAGCTCCTGCCTCAGCCCTGGCTCCTGGG...TACCGAATCATACCCTATGTCTACTGAAGCAGGTCCACCTAAGAGGTTGAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR GCA 90 bp | CTTCTGGAAGCAGTGGCTTCCTCTTGCTTTCAACCTCTTAGGTGGACCTGCTTCTTCGGCCACCTTGCGTaGAGGCAGCAAATAGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: LLEAVASSCFQPLRWTCFFGHLA*RQQIER Trigger: GCGCTCTATTTGCTGCCTGCACGCAAGGTGGCCGAA...GAAGCAGGTCCACCTAAGAGGTTGAAAGCAAGAGGAAGCCACTGCTTCCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR GCA 90 bp | CTGGAAGCAGTGGCTTCCTCTTGCTTTCAACCTCTTAGGTGGACCTGCTTCAGTGGCCTTCGGCCACCTTaGGTGCAGGCAGCAAATAGA | + |
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Preference number: 4 (lower is better) Translates to: LEAVASSCFQPLRWTCFSGLRPP*VQAANR Trigger: TCTATTTGCTGCCTGCACGCAAGGTGGCCGAAGGCC...ACTGAAGCAGGTCCACCTAAGAGGTTGAAAGCAAGAGGAAGCCACTGCTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR GCA 90 bp | CTCACAGAAATATTTGAAGTCAAAGGAACCGAGGCGAGGGTTCAGCTCCCGTCCGGCCTTCGGCCACCTTaGGTGCAGGCAGCAAATAGA | + |
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Preference number: 4 (lower is better) Translates to: LTEIFEVKGTEARVQLPSGLRPP*VQAANR Trigger: TCTATTTGCTGCCTGCACGCAAGGTGGCCGAAGGCC...GGACGGGAGCTGAACCCTCGCCTCGGTTCCTTTGACTTCAAATATTTCTGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161528.2 |
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| CDS-3UTR CCA 90 bp | GCTTTCAACCTCTTAGGTGGACCTGCTTCAGTAGACATAGGGTATGATTCGGTAGCCGCCAGGAGCAGGTaGAACATGGTGGCAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: AFNLLGGPASVDIGYDSVAARSR*NMVAGS Trigger: GCTGCCTGCCACCATGTTCCACCTGCTCCTGGCGGC...TACCGAATCATACCCTATGTCTACTGAAGCAGGTCCACCTAAGAGGTTGAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR TCA 90 bp | GATTCGGTAAGGCACACGCTTGCAGTACTCCTGCCAGGCACGGCCATACTTTTGATACATGGAATTTCCTaGGTTTCCCCCAGGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: DSVRHTLAVLLPGTAILLIHGIS*VSPRSQ Trigger: CTGGCTCCTGGGGGAAACTCAGGAAATTCCATGTAT...CAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCAAGCGTGTGCCTTACCGAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR GCA 90 bp | CTCTTAGGTGGACCTGCTTCAGTAGACATAGGGTATGATTCGGTAAGGCACACGCGAAGCTCTGCCTCCTaGATCAGCAGGGCCAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: LLGGPASVDIGYDSVRHTRSSAS*ISRARL Trigger: TAACCTGGCCCTGCTGATGCAGGAGGCAGAGCTTCG...CGTGTGCCTTACCGAATCATACCCTATGTCTACTGAAGCAGGTCCACCTAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR CCA 90 bp | TATTTGAAGTCAAAGGAACCGAGGCGAGGGTTCAGCTCCCGTCCAAGAAAGAAGAATTCCAGTGGGGCCTaGGAGGCCTCACGAGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: YLKSKEPRRGFSSRPRKKNSSGA*EASREV Trigger: GACTTCTCGTGAGGCCTCCCAGGCCCCACTGGAATT...CTTCTTTCTTGGACGGGAGCTGAACCCTCGCCTCGGTTCCTTTGACTTCAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161090.8 ENSMUST00000161528.2 |
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| CDS-3UTR CCA 90 bp | CTCTTAGGTGGACCTGCTTCAGTAGACATAGGGTATGATTCGGTAAGGCACACGGAGGGAAGGGACCCATaGGATAGCCCACAGGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: LLGGPASVDIGYDSVRHTEGRDP*DSPQGK Trigger: TTTGCCCTGTGGGCTATCCCATGGGTCCCTTCCCTC...CGTGTGCCTTACCGAATCATACCCTATGTCTACTGAAGCAGGTCCACCTAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| 3UTR CAA 72 bp | CAGCCAATGAGGCCAGGTCTCAGCTCACAGAAATATTaGAAGTCAAAGGAACCGAGGCGAGGGTTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QPMRPGLSSQKY*KSKEPRRGFSS Trigger: GGAGCTGAACCCTCGCCTCGGTTCCTTTGACTTCAAATATTTCTGTGAGCTGAGACCTGGCCTCATTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161090.8 ENSMUST00000161528.2 |
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| CDS-3UTR TCA 90 bp | GGTAAGGCACACGCTTGCAGTACTCCTGCCAGGCACGGCCATACTTTTGGAGGCCAGAAGGATTCTTCCTaGATGTGTTTTTCTGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: GKAHACSTPARHGHTFGGQKDSS*MCFSGS Trigger: ACTCCCAGAAAAACACATTCAGGAAGAATCCTTCTG...GCCTCCAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCAAGCGTGTGCCTTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR GCA 90 bp | AATGAGGCCAGGTCTCAGCTCACAGAAATATTTGAAGTCAAAGGAACCGAGGCGCCTGGAAGCCTTGCGTaGAGGCAGCAAATAGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: NEARSQLTEIFEVKGTEAPGSLA*RQQIER Trigger: GCGCTCTATTTGCTGCCTGCACGCAAGGCTTCCAGG...CGCCTCGGTTCCTTTGACTTCAAATATTTCTGTGAGCTGAGACCTGGCCTCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161090.8 |
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| CDS-3UTR CCA 90 bp | AGGTCTCAGCTCACAGAAATATTTGAAGTCAAAGGAACCGAGGCGAGGGTTCAGAATTCCAGTGGGGCCTaGGAGGCCTCACGAGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: RSQLTEIFEVKGTEARVQNSSGA*EASREV Trigger: GACTTCTCGTGAGGCCTCCCAGGCCCCACTGGAATT...CTGAACCCTCGCCTCGGTTCCTTTGACTTCAAATATTTCTGTGAGCTGAGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161090.8 ENSMUST00000161528.2 |
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| CDS-3UTR CCA 90 bp | TGGCTTCCTCTTGCTTTCAACCTCTTAGGTGGACCTGCTTCAGTAGACATAGGGGCAGGTGGAACATGGTaGCAGGCAGCAGGATCAGTA | + |
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Preference number: 4 (lower is better) Translates to: WLPLAFNLLGGPASVDIGAGGTW*QAAGSV Trigger: TACTGATCCTGCTGCCTGCCACCATGTTCCACCTGC...CCCTATGTCTACTGAAGCAGGTCCACCTAAGAGGTTGAAAGCAAGAGGAAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR CCA 90 bp | TGCTGCCCACCCAGCAATGCTAGCCCACTCTGCTCTTCTCCTGGCCCAAGTCCAGAAAGAAGTCATACATaGAATTTCCTGAGTTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: CCPPSNASPLCSSPGPSPERSHT*NFLSFP Trigger: GGGGAAACTCAGGAAATTCCATGTATGACTTCTTTC...TGGACTTGGGCCAGGAGAAGAGCAGAGTGGGCTAGCATTGCTGGGTGGGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160417.8 |
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| CDS-3UTR TCA 90 bp | ATGAATGATTGCTGCCCACCCAGCAATGCTAGCCCACTCTGCTCTTCTCCTGGCGCTCACAGAAATATTTaGAGTCAAAGGAACCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: MNDCCPPSNASPLCSSPGAHRNI*SQRNRG Trigger: GCCTCGGTTCCTTTGACTTCAAATATTTCTGTGAGC...GCCAGGAGAAGAGCAGAGTGGGCTAGCATTGCTGGGTGGGCAGCAATCATTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160417.8 |
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| CDS-3UTR GCA 90 bp | AACCTCTTAGGTGGACCTGCTTCAGTAGACATAGGGTATGATTCGGTAAGGCACACAGGGCAAAGACCATaGCAGAGCCATGATGAGATC | + |
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Preference number: 4 (lower is better) Translates to: NLLGGPASVDIGYDSVRHTGQRP*QSHDEI Trigger: GATCTCATCATGGCTCTGGCATGGTCTTTGCCCTGT...GTGCCTTACCGAATCATACCCTATGTCTACTGAAGCAGGTCCACCTAAGAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR TCA 90 bp | GCAGTGGCTTCCTCTTGCTTTCAACCTCTTAGGTGGACCTGCTTCAGTAGACATGCTCACAGAAATATTTaGAGTCAAAGGAACCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: AVASSCFQPLRWTCFSRHAHRNI*SQRNRG Trigger: GCCTCGGTTCCTTTGACTTCAAATATTTCTGTGAGC...ATGTCTACTGAAGCAGGTCCACCTAAGAGGTTGAAAGCAAGAGGAAGCCACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR TCA 90 bp | GCTTTCAACCTCTTAGGTGGACCTGCTTCAGTAGACATAGGGTATGATTCGGTATTATGTCCATGGTGGTaGGGACAGACTCCTCATACC | + |
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Preference number: 4 (lower is better) Translates to: AFNLLGGPASVDIGYDSVLCPWW*GQTPHT Trigger: GGTATGAGGAGTCTGTCCTCACCACCATGGACATAA...TACCGAATCATACCCTATGTCTACTGAAGCAGGTCCACCTAAGAGGTTGAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR TCA 90 bp | CTCTTAGGTGGACCTGCTTCAGTAGACATAGGGTATGATTCGGTAAGGCACACGCTCCAAAGACCAGCATaGAGCCAAAACCATCATGTA | + |
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Preference number: 4 (lower is better) Translates to: LLGGPASVDIGYDSVRHTLQRPA*SQNHHV Trigger: TACATGATGGTTTTGGCTTCATGCTGGTCTTTGGAG...CGTGTGCCTTACCGAATCATACCCTATGTCTACTGAAGCAGGTCCACCTAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR CCA 90 bp | GCTTTCAACCTCTTAGGTGGACCTGCTTCAGTAGACATAGGGTATGATTCGGTAGAAAGAAGTCATACATaGAATTTCCTGAGTTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: AFNLLGGPASVDIGYDSVERSHT*NFLSFP Trigger: GGGGAAACTCAGGAAATTCCATGTATGACTTCTTTC...TACCGAATCATACCCTATGTCTACTGAAGCAGGTCCACCTAAGAGGTTGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR CAA 90 bp | GATTCGGTAAGGCACACGCTTGCAGTACTCCTGCCAGGCACGGCCATACTTTTGAGCAACTGGAAGCCATaGACCAGCCACATAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: DSVRHTLAVLLPGTAILLSNWKP*TSHIAR Trigger: CCTGGCTATGTGGCTGGTCAATGGCTTCCAGTTGCT...CAAAAGTATGGCCGTGCCTGGCAGGAGTACTGCAAGCGTGTGCCTTACCGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS-3UTR CAA 90 bp | ATGAATGATTGCTGCCCACCCAGCAATGCTAGCCCACTCTGCTCTTCTCCTGGCAGCTCACAGAAATATTaGAAGTCAAAGGAACCGAGG | + |
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Preference number: 5 (lower is better) Translates to: MNDCCPPSNASPLCSSPGSSQKY*KSKEPR Trigger: CCTCGGTTCCTTTGACTTCAAATATTTCTGTGAGCT...GCCAGGAGAAGAGCAGAGTGGGCTAGCATTGCTGGGTGGGCAGCAATCATTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160417.8 |
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| CDS-3UTR CAA 90 bp | CTTCTGGAAGCAGTGGCTTCCTCTTGCTTTCAACCTCTTAGGTGGACCTGCTTCAGCTCACAGAAATATTaGAAGTCAAAGGAACCGAGG | + |
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Preference number: 5 (lower is better) Translates to: LLEAVASSCFQPLRWTCFSSQKY*KSKEPR Trigger: CCTCGGTTCCTTTGACTTCAAATATTTCTGTGAGCT...GAAGCAGGTCCACCTAAGAGGTTGAAAGCAAGAGGAAGCCACTGCTTCCAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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| CDS GCA 72 bp | CAGGAGCCAGGGCTGAGGCAGGAGCTACCAAAGCCTTaGGTGCAGGCAGCAAATAGAGCGCCACCTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: QEPGLRQELPKP*VQAANRAPPAG Trigger: GCCTGCAGGTGGCGCTCTATTTGCTGCCTGCACGCAAGGCTTTGGTAGCTCCTGCCTCAGCCCTGGCTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162575.8 |
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| CDS CCA 72 bp | GCAGCAGATGGGATAGCCCTGGAGGGAAGGGACCCATaGGATAGCCCACAGGGCAAAGACCATGCCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: AADGIALEGRDP*DSPQGKDHARA Trigger: GGCTCTGGCATGGTCTTTGCCCTGTGGGCTATCCCATGGGTCCCTTCCCTCCAGGGCTATCCCATCTGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113543.9 |
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