Pregenerated sensors for TM6SF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036151Ensembl transcript IDs: ENSMUST00000049197.6, ENSMUST00000110160.9
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GGGGGCATTAGAGTCTGGGTGACTTTTGAGGTACAGTaGCGCAGCAAGAACACCTATGCTCCTTTCTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: GGIRVWVTFEVQ*RSKNTYAPFWP Trigger: AGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTACCTCAAAAGTCACCCAGACTCTAATGCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| 3UTR CCA 72 bp | GTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTaGATTGCAGTTTCTCCGAATGTCCGTGTGGCTAAC | + |
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Preference number: 3 (lower is better) Translates to: VTQQEHLCSFLA*IAVSPNVRVAN Trigger: GTTAGCCACACGGACATTCGGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR TCA 90 bp | AATGTATGGGAAGAGGTGATGGCTAGATTCCAGGAGGGGGCATTAGAGTCTGGGCTGGCACGCGGTAGGTaGAGGGTGTGCGCATGTGCA | + |
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Preference number: 4 (lower is better) Translates to: NVWEEVMARFQEGALESGLARGR*RVCACA Trigger: TGCACATGCGCACACCCTTCACCTACCGCGTGCCAG...CCCAGACTCTAATGCCCCCTCCTGGAATCTAGCCATCACCTCTTCCCATACATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR TCA 90 bp | AGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCCTGGCACGCGGTAGGTaGAGGGTGTGCGCATGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SDAARTPMLLSGLDCSFSLARGR*RVCACA Trigger: TGCACATGCGCACACCCTTCACCTACCGCGTGCCAG...GGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR CCA 90 bp | AGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCAGCCCAGGTGTCCTCTaGCACGCGGTAGGTGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDAARTPMLLSGLDCSFSSPGVL*HAVGEG Trigger: CCCTTCACCTACCGCGTGCCAGAGGACACCTGGGCT...GGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR CCA 90 bp | GCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCGAATGTAGCCCAGGTGTCCTCTaGCACGCGGTAGGTGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: AARTPMLLSGLDCSFSECSPGVL*HAVGEG Trigger: CCCTTCACCTACCGCGTGCCAGAGGACACCTGGGCT...ACATTCGGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR GCA 90 bp | AGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCCGAAGATGGCAGCGCTaGATGCAAGAAGAAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDAARTPMLLSGLDCSFSRRWQR*MQEEGG Trigger: CCCGCCTTCTTCTTGCATGCAGCGCTGCCATCTTCG...GGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR GCA 90 bp | TTGAGGTACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCCGAAGATGGCAGCGCTaGATGCAAGAAGAAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRYSDAARTPMLLSGLDCRRWQR*MQEEGG Trigger: CCCGCCTTCTTCTTGCATGCAGCGCTGCCATCTTCG...GCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTACCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR CCA 90 bp | AATGTATGGGAAGAGGTGATGGCTAGATTCCAGGAGGGGGCATTAGAGTCTGGGGTTGGTGCCCGGGACTaGTTGAAGATCCTCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: NVWEEVMARFQEGALESGVGARD*LKILTP Trigger: CGGTGTGAGGATCTTCAACCAGTCCCGGGCACCAAC...CCCAGACTCTAATGCCCCCTCCTGGAATCTAGCCATCACCTCTTCCCATACATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR CCA 90 bp | TTGAGGTACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCGTTGGTGCCCGGGACTaGTTGAAGATCCTCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: LRYSDAARTPMLLSGLDCVGARD*LKILTP Trigger: CGGTGTGAGGATCTTCAACCAGTCCCGGGCACCAAC...GCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTACCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| 3UTR CAA 72 bp | CGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATaGCAGTTTCTCCGAATGTCCGTGTGGCTAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSKNTYAPFWPG*QFLRMSVWLTH Trigger: GTGGGTTAGCCACACGGACATTCGGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR GCA 90 bp | GCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCGAATGTCCCATGTGTGAGAACTaGGCCTGGCCAATGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AARTPMLLSGLDCSFSECPMCEN*AWPMAP Trigger: TGGAGCCATTGGCCAGGCGCAGTTCTCACACATGGG...ACATTCGGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR GCA 90 bp | AGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCAAGGGTGTGCGCATGTaGATGGAGGCACCCATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SDAARTPMLLSGLDCSFSKGVRM*MEAPMC Trigger: ACACATGGGTGCCTCCATGCACATGCGCACACCCTT...GGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR CCA 90 bp | AATGTATGGGAAGAGGTGATGGCTAGATTCCAGGAGGGGGCATTAGAGTCTGGGACACCAGGATGCTCATaGCGAAGGATCCCAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: NVWEEVMARFQEGALESGTPGCS*RRIPAS Trigger: ACTGGCTGGGATCCTTCGCCATGAGCATCCTGGTGT...CCCAGACTCTAATGCCCCCTCCTGGAATCTAGCCATCACCTCTTCCCATACATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR CCA 90 bp | AGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCACACCAGGATGCTCATaGCGAAGGATCCCAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SDAARTPMLLSGLDCSFSTPGCS*RRIPAS Trigger: ACTGGCTGGGATCCTTCGCCATGAGCATCCTGGTGT...GGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR CCA 90 bp | TACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCCAGCATCTGCAACTTTaGGTAGGCCACAGGGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: YSDAARTPMLLSGLDCSFQHLQL*VGHRVP Trigger: CGGGACCCTGTGGCCTACCCAAAGTTGCAGATGCTG...GAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR CCA 90 bp | AGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCACTGCGCCTGGCCAATaGCTCCAGCAAATACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDAARTPMLLSGLDCSFSTAPGQ*LQQIPR Trigger: CCTTGGTATTTGCTGGAGCCATTGGCCAGGCGCAGT...GGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR TCA 90 bp | GCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCGAATGTAGAGAGGGTCGTAGGTaGTCTCCCCATGAGATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AARTPMLLSGLDCSFSECREGRR*SPHEIG Trigger: GCCTATCTCATGGGGAGATCACCTACGACCCTCTCT...ACATTCGGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR TCA 90 bp | TACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCAGAGAGGGTCGTAGGTaGTCTCCCCATGAGATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YSDAARTPMLLSGLDCSFREGRR*SPHEIG Trigger: GCCTATCTCATGGGGAGATCACCTACGACCCTCTCT...GAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR TCA 90 bp | TTGAGGTACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCGGTCCACCACCGAGGTaGAGGAGAAGATCACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRYSDAARTPMLLSGLDCGPPPR*RRRSQR Trigger: TCTTTGTGATCTTCTCCTTCACCTCGGTGGTGGACC...GCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTACCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR TCA 90 bp | TTGAGGTACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCCATCCCAGTAGCAGATaGAGATGCCATGTGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRYSDAARTPMLLSGLDCHPSSR*RCHVLC Trigger: GCACAGCACATGGCATCTTCATCTGCTACTGGGATG...GCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTACCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR GCA 90 bp | CTTTTGAGGTACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATAGATGCCATGTGCTGTaGGTAGGTAGGGCTCACCCT | + |
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Preference number: 4 (lower is better) Translates to: LLRYSDAARTPMLLSGLDRCHVL*VGRAHP Trigger: AGGGTGAGCCCTACCTACGCACAGCACATGGCATCT...ATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTACCTCAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR GCA 90 bp | GCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCGAATGTAGATGCCATGTGCTGTaGGTAGGTAGGGCTCACCCT | + |
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Preference number: 4 (lower is better) Translates to: AARTPMLLSGLDCSFSECRCHVL*VGRAHP Trigger: AGGGTGAGCCCTACCTACGCACAGCACATGGCATCT...ACATTCGGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR GCA 90 bp | AATGTATGGGAAGAGGTGATGGCTAGATTCCAGGAGGGGGCATTAGAGTCTGGGGGAGAAACACCAGGATaGTCATGGCGAAGGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: NVWEEVMARFQEGALESGGETPG*SWRRIP Trigger: TGGGATCCTTCGCCATGAGCATCCTGGTGTTTCTCC...CCCAGACTCTAATGCCCCCTCCTGGAATCTAGCCATCACCTCTTCCCATACATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR GCA 90 bp | AATGTATGGGAAGAGGTGATGGCTAGATTCCAGGAGGGGGCATTAGAGTCTGGGGGTATAGGAGGTTGGTaGCCGGGACTGGTTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: NVWEEVMARFQEGALESGGIGGW*PGLVED Trigger: ATCTTCAACCAGTCCCGGGCACCAACCTCCTATACC...CCCAGACTCTAATGCCCCCTCCTGGAATCTAGCCATCACCTCTTCCCATACATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR GCA 90 bp | GCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCGAATGTAAGGGTGTGCGCATGTaGATGGAGGCACCCATGTGT | + |
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Preference number: 4 (lower is better) Translates to: AARTPMLLSGLDCSFSECKGVRM*MEAPMC Trigger: ACACATGGGTGCCTCCATGCACATGCGCACACCCTT...ACATTCGGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR CCA 90 bp | CTTTTGAGGTACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATACTGCGCCTGGCCAATaGCTCCAGCAAATACCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LLRYSDAARTPMLLSGLDTAPGQ*LQQIPR Trigger: CCTTGGTATTTGCTGGAGCCATTGGCCAGGCGCAGT...ATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTACCTCAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR CCA 90 bp | TACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCGTCCTGTGGCGAAGATaGCAGCGCTGCATGCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: YSDAARTPMLLSGLDCSFVLWRR*QRCMQE Trigger: TTCTTGCATGCAGCGCTGCCATCTTCGCCACAGGAC...GAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR CCA 90 bp | AGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCTGCTGCTTCTTGTCTTaGTCCTGTGGCGAAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: SDAARTPMLLSGLDCSFSCCFLS*SCGEDG Trigger: GCCATCTTCGCCACAGGACCAAGACAAGAAGCAGCA...GGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR TCA 90 bp | GCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCGAATGTGGTCCACCACCGAGGTaGAGGAGAAGATCACAAAGA | + |
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Preference number: 4 (lower is better) Translates to: AARTPMLLSGLDCSFSECGPPPR*RRRSQR Trigger: TCTTTGTGATCTTCTCCTTCACCTCGGTGGTGGACC...ACATTCGGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR TCA 90 bp | TACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCCATCCCAGTAGCAGATaGAGATGCCATGTGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: YSDAARTPMLLSGLDCSFHPSSR*RCHVLC Trigger: GCACAGCACATGGCATCTTCATCTGCTACTGGGATG...GAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR GCA 90 bp | AGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCGCCATCTTCTTGGAGTaGAATGACAAGGTCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: SDAARTPMLLSGLDCSFSAIFLE*NDKVHH Trigger: GTGGTGGACCTTGTCATTGCACTCCAAGAAGATGGC...GGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR GCA 90 bp | TTGAGGTACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCGCCATCTTCTTGGAGTaGAATGACAAGGTCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: LRYSDAARTPMLLSGLDCAIFLE*NDKVHH Trigger: GTGGTGGACCTTGTCATTGCACTCCAAGAAGATGGC...GCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTACCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR GCA 90 bp | CTTTTGAGGTACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATGGAGAAACACCAGGATaGTCATGGCGAAGGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: LLRYSDAARTPMLLSGLDGETPG*SWRRIP Trigger: TGGGATCCTTCGCCATGAGCATCCTGGTGTTTCTCC...ATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTACCTCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR CCA 90 bp | TACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTGCTGCTTCTTGTCTTaGTCCTGTGGCGAAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: YSDAARTPMLLSGLDCSFCCFLS*SCGEDG Trigger: GCCATCTTCGCCACAGGACCAAGACAAGAAGCAGCA...GAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR GCA 90 bp | TACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCGGTACCTTTTCCTTTTaGGGATGGCACCAGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: YSDAARTPMLLSGLDCSFGTFSF*GWHQPL Trigger: CAATGGCTGGTGCCATCCGCAAAAGGAAAAGGTACC...GAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR TCA 90 bp | AGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCTGGTGTAGAAATCCATaGAGCCCATCATGTAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SDAARTPMLLSGLDCSFSWCRNP*SPSCSH Trigger: ATGGCTACATGATGGGCTTCATGGATTTCTACACCA...GGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR TCA 90 bp | AGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCATTGGTAAATATAGATaGAGCAGGCATCTGTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SDAARTPMLLSGLDCSFSIGKYR*SRHLWG Trigger: GCCCCACAGATGCCTGCTTCATCTATATTTACCAAT...GGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR TCA 90 bp | TACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCATTGGTAAATATAGATaGAGCAGGCATCTGTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: YSDAARTPMLLSGLDCSFIGKYR*SRHLWG Trigger: GCCCCACAGATGCCTGCTTCATCTATATTTACCAAT...GAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS-3UTR GCA 90 bp | AATGTATGGGAAGAGGTGATGGCTAGATTCCAGGAGGGGGCATTAGAGTCTGGGGACAGTGAAGAGCGCTaGAAAGATGAGGTATACTAT | + |
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Preference number: 4 (lower is better) Translates to: NVWEEVMARFQEGALESGDSEER*KDEVYY Trigger: ATAGTATACCTCATCTTTGCAGCGCTCTTCACTGTC...CCCAGACTCTAATGCCCCCTCCTGGAATCTAGCCATCACCTCTTCCCATACATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS GCA 90 bp | TGCTGCTTCTTGTCTTGGTCCTGTGGCGAAGATGGCAGCGCTGCATaGAAGAAGAAGGCGGGCCGCCACAGGCAGCGGAAAGCCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: CCFLSWSCGEDGSAA*KKKAGRHRQRKASR Trigger: CCTGCTGGCTTTCCGCTGCCTGTGGCGGCCCGCCTTCTTCTTGCATGCAGCGCTGCCATCTTCGCCACAGGACCAAGACAAGAAGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS CCA 90 bp | GGTTGGTGCCCGGGACTGGTTGAAGATCCTCACACCGGCCCAGCATaGGACCAGCATGTACAGGATGGCGAGGAAGAAGGTAGGCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GWCPGLVEDPHTGPA*DQHVQDGEEEGRPH Trigger: ATGAGGCCTACCTTCTTCCTCGCCATCCTGTACATGCTGGTCCCATGCTGGGCCGGTGTGAGGATCTTCAACCAGTCCCGGGCACCAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS TCA 90 bp | CCTGTACCATGTCAGGGGTATAGGAGGTTGGTGCCCGGGACTGGTTaGAGATCCTCACACCGGCCCAGCATGGGACCAGCATGTACAGGA | + |
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Preference number: 5 (lower is better) Translates to: PVPCQGYRRLVPGTG*RSSHRPSMGPACTG Trigger: TCCTGTACATGCTGGTCCCATGCTGGGCCGGTGTGAGGATCTTCAACCAGTCCCGGGCACCAACCTCCTATACCCCTGACATGGTACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110160.9 |
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| CDS TCA 90 bp | GTTCTTCCATGTCAGGGGTATAGGAGGTTGGTGCCCGGGACTGGTTaGAGATCCTCACACCGGCCCAGCATGGGACCAGCATGTACAGGA | + |
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Preference number: 5 (lower is better) Translates to: VLPCQGYRRLVPGTG*RSSHRPSMGPACTG Trigger: TCCTGTACATGCTGGTCCCATGCTGGGCCGGTGTGAGGATCTTCAACCAGTCCCGGGCACCAACCTCCTATACCCCTGACATGGAAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049197.6 |
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| CDS GCA 90 bp | GGGGCAGTCAAGTACCACCAGACCCCGGAAGACAGTGAAGAGCGCTaGAAAGATGAGGTATACTATGAGTGCCAGGTCAGCCGGACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GAVKYHQTPEDSEER*KDEVYYECQVSRTL Trigger: CAGCGTCCGGCTGACCTGGCACTCATAGTATACCTCATCTTTGCAGCGCTCTTCACTGTCTTCCGGGGTCTGGTGGTACTTGACTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS GCA 90 bp | GAGACTTTTCTTCTGTTCTTCCATGTCAGGGGTATAGGAGGTTGGTaGCCGGGACTGGTTGAAGATCCTCACACCGGCCCAGCATGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ETFLLFFHVRGIGGW*PGLVEDPHTGPAWD Trigger: GTCCCATGCTGGGCCGGTGTGAGGATCTTCAACCAGTCCCGGGCACCAACCTCCTATACCCCTGACATGGAAGAACAGAAGAAAAGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049197.6 |
||
| CDS GCA 90 bp | TTTCTTCTGTTCTTCCTGTACCATGTCAGGGGTATAGGAGGTTGGTaGCCGGGACTGGTTGAAGATCCTCACACCGGCCCAGCATGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FLLFFLYHVRGIGGW*PGLVEDPHTGPAWD Trigger: GTCCCATGCTGGGCCGGTGTGAGGATCTTCAACCAGTCCCGGGCACCAACCTCCTATACCCCTGACATGGTACAGGAAGAACAGAAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110160.9 |
||
| CDS-3UTR CAA 90 bp | AGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCGGGCGCAGAATGACATaGCCACAGTCCTGCCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SDAARTPMLLSGLDCSFSGRRMT*PQSCRL Trigger: TAGCCGGCAGGACTGTGGCAATGTCATTCTGCGCCC...GGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS GCA 90 bp | AGGATCCCAGCCAGTAGAGCCCAAGGTTCCGGTACCTTTTCCTTTTaGGGATGGCACCAGCCATTGTCAGATAGAGCAGGTAGTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RIPASRAQGSGTFSF*GWHQPLSDRAGSAQ Trigger: CTGTGCACTACCTGCTCTATCTGACAATGGCTGGTGCCATCCGCAAAAGGAAAAGGTACCGGAACCTTGGGCTCTACTGGCTGGGATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS CCA 90 bp | GAAGAGACTTTTCTTCTGTTCTTCCATGTCAGGGGTATAGGAGGTTaGTGCCCGGGACTGGTTGAAGATCCTCACACCGGCCCAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: EETFLLFFHVRGIGG*CPGLVEDPHTGPAW Trigger: CCATGCTGGGCCGGTGTGAGGATCTTCAACCAGTCCCGGGCACCAACCTCCTATACCCCTGACATGGAAGAACAGAAGAAAAGTCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049197.6 |
||
| CDS CCA 90 bp | ACTTTTCTTCTGTTCTTCCTGTACCATGTCAGGGGTATAGGAGGTTaGTGCCCGGGACTGGTTGAAGATCCTCACACCGGCCCAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: TFLLFFLYHVRGIGG*CPGLVEDPHTGPAW Trigger: CCATGCTGGGCCGGTGTGAGGATCTTCAACCAGTCCCGGGCACCAACCTCCTATACCCCTGACATGGTACAGGAAGAACAGAAGAAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110160.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTGAGGTACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATGGGCGCAGAATGACATaGCCACAGTCCTGCCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LLRYSDAARTPMLLSGLDGRRMT*PQSCRL Trigger: TAGCCGGCAGGACTGTGGCAATGTCATTCTGCGCCC...ATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTACCTCAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS-3UTR CAA 90 bp | AGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCTCAGCATCTGCAACTTaGGGTAGGCCACAGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SDAARTPMLLSGLDCSFSSASAT*GRPQGP Trigger: GGGACCCTGTGGCCTACCCAAAGTTGCAGATGCTGA...GGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS TCA 90 bp | AGGCCACAGGGTCCCGAAGGTATGGCTCATATTGGTAAATATAGATaGAGCAGGCATCTGTGGGGCAGTCAAGTACCACCAGACCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPQGPEGMAHIGKYR*SRHLWGSQVPPDPG Trigger: TCCGGGGTCTGGTGGTACTTGACTGCCCCACAGATGCCTGCTTCATCTATATTTACCAATATGAGCCATACCTTCGGGACCCTGTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS GCA 90 bp | CTGAACTGTATTTACCAAGGATGTTTCCCGGGAGAAACACCAGGATaGTCATGGCGAAGGATCCCAGCCAGTAGAGCCCAAGGTTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LNCIYQGCFPGETPG*SWRRIPASRAQGSG Trigger: ACCGGAACCTTGGGCTCTACTGGCTGGGATCCTTCGCCATGAGCATCCTGGTGTTTCTCCCGGGAAACATCCTTGGTAAATACAGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS CCA 90 bp | CCAGCCAGTAGAGCCCAAGGTTCCGGTACCTTTTCCTTTTGCGGATaGCACCAGCCATTGTCAGATAGAGCAGGTAGTGCACAGTACCAT | + |
|
Preference number: 5 (lower is better) Translates to: PASRAQGSGTFSFCG*HQPLSDRAGSAQYH Trigger: ATGGTACTGTGCACTACCTGCTCTATCTGACAATGGCTGGTGCCATCCGCAAAAGGAAAAGGTACCGGAACCTTGGGCTCTACTGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS-3UTR CAA 90 bp | TACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCAGCATCTGCAACTTaGGGTAGGCCACAGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: YSDAARTPMLLSGLDCSFSASAT*GRPQGP Trigger: GGGACCCTGTGGCCTACCCAAAGTTGCAGATGCTGA...GAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS-3UTR CAA 90 bp | AGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCCTGCTGCTTCTTGTCTaGGTCCTGTGGCGAAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: SDAARTPMLLSGLDCSFSLLLLV*VLWRRW Trigger: CCATCTTCGCCACAGGACCAAGACAAGAAGCAGCAG...GGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS CCA 90 bp | TGTATTTACCAAGGATGTTTCCCGGGAGAAACACCAGGATGCTCATaGCGAAGGATCCCAGCCAGTAGAGCCCAAGGTTCCGGTACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CIYQGCFPGETPGCS*RRIPASRAQGSGTF Trigger: AAAGGTACCGGAACCTTGGGCTCTACTGGCTGGGATCCTTCGCCATGAGCATCCTGGTGTTTCTCCCGGGAAACATCCTTGGTAAATACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS-3UTR CAA 90 bp | AGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCCGGTACCTTTTCCTTTaGCGGATGGCACCAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SDAARTPMLLSGLDCSFSRYLFL*RMAPAI Trigger: AATGGCTGGTGCCATCCGCAAAAGGAAAAGGTACCG...GGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCGAATGTCTGCTGCTTCTTGTCTaGGTCCTGTGGCGAAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: AARTPMLLSGLDCSFSECLLLLV*VLWRRW Trigger: CCATCTTCGCCACAGGACCAAGACAAGAAGCAGCAG...ACATTCGGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS GCA 90 bp | CCGGAAGACAGTGAAGAGCGCTGCAAAGATGAGGTATACTATGAGTaGCAGGTCAGCCGGACGCTGGAAGAGACTTTTCTTCTGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PEDSEERCKDEVYYE*QVSRTLEETFLLFF Trigger: GAAGAACAGAAGAAAAGTCTCTTCCAGCGTCCGGCTGACCTGGCACTCATAGTATACCTCATCTTTGCAGCGCTCTTCACTGTCTTCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS-3UTR CAA 90 bp | AATGTATGGGAAGAGGTGATGGCTAGATTCCAGGAGGGGGCATTAGAGTCTGGGAGTGCCAATAGCAGGTaGCTCAGAAAGAAGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NVWEEVMARFQEGALESGSANSR*LRKKVA Trigger: GGCTACCTTCTTTCTGAGCAACCTGCTATTGGCACT...CCCAGACTCTAATGCCCCCTCCTGGAATCTAGCCATCACCTCTTCCCATACATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS CCA 90 bp | GCTGCAAAGATGAGGTATACTATGAGTGCCAGGTCAGCCGGACGCTaGAAGAGACTTTTCTTCTGTTCTTCCTGTACCATGTCAGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AAKMRYTMSARSAGR*KRLFFCSSCTMSGV Trigger: TACCCCTGACATGGTACAGGAAGAACAGAAGAAAAGTCTCTTCCAGCGTCCGGCTGACCTGGCACTCATAGTATACCTCATCTTTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110160.9 |
||
| CDS-3UTR CAA 90 bp | AGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCCATGTAGCCATCTTCTaGGAGTGCAATGACAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SDAARTPMLLSGLDCSFSHVAIF*ECNDKV Trigger: GACCTTGTCATTGCACTCCAAGAAGATGGCTACATG...GGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS-3UTR CAA 90 bp | TACAGTGACGCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCAGTGCCAATAGCAGGTaGCTCAGAAAGAAGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: YSDAARTPMLLSGLDCSFSANSR*LRKKVA Trigger: GGCTACCTTCTTTCTGAGCAACCTGCTATTGGCACT...GAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGCGTCACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCAAGAACACCTATGCTCCTTTCTGGCCTGGATTGCAGTTTCTCCGAATGTCATGTAGCCATCTTCTaGGAGTGCAATGACAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AARTPMLLSGLDCSFSECHVAIF*ECNDKV Trigger: GACCTTGTCATTGCACTCCAAGAAGATGGCTACATG...ACATTCGGAGAAACTGCAATCCAGGCCAGAAAGGAGCATAGGTGTTCTTGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS GCA 90 bp | GGTGTAGAAATCCATGAAGCCCATCATGTAGCCATCTTCTTGGAGTaGAATGACAAGGTCCACCACCGAGGTGAAGGAGAAGATCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: GVEIHEAHHVAIFLE*NDKVHHRGEGEDHK Trigger: TTTGTGATCTTCTCCTTCACCTCGGTGGTGGACCTTGTCATTGCACTCCAAGAAGATGGCTACATGATGGGCTTCATGGATTTCTACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS CCA 72 bp | AAGGCGGGCCGCCACAGGCAGCGGAAAGCCAGCAGGTaGGGACCCAGTGCCAATAGCAGGTTGCTCAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: KAGRHRQRKASR*GPSANSRLLRK Trigger: CTTTCTGAGCAACCTGCTATTGGCACTGGGTCCCCACCTGCTGGCTTTCCGCTGCCTGTGGCGGCCCGCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS CCA 72 bp | TGGAGGCACCCATGTGTGAGAACTGCGCCTGGCCAATaGCTCCAGCAAATACCAAGGCCCAGTCCGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: WRHPCVRTAPGQ*LQQIPRPSPAA Trigger: GGCTGCCGGACTGGGCCTTGGTATTTGCTGGAGCCATTGGCCAGGCGCAGTTCTCACACATGGGTGCCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS TCA 72 bp | TGTCAGGGGTATAGGAGGTTGGTGCCCGGGACTGGTTaGAGATCCTCACACCGGCCCAGCATGGGACCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CQGYRRLVPGTG*RSSHRPSMGPA Trigger: TGCTGGTCCCATGCTGGGCCGGTGTGAGGATCTTCAACCAGTCCCGGGCACCAACCTCCTATACCCCTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS GCA 72 bp | TTGTCTTGGTCCTGTGGCGAAGATGGCAGCGCTGCATaGAAGAAGAAGGCGGGCCGCCACAGGCAGCGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSWSCGEDGSAA*KKKAGRHRQRK Trigger: TTTCCGCTGCCTGTGGCGGCCCGCCTTCTTCTTGCATGCAGCGCTGCCATCTTCGCCACAGGACCAAGACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS GCA 72 bp | GTGCGCATGTGCATGGAGGCACCCATGTGTGAGAACTaGGCCTGGCCAATGGCTCCAGCAAATACCAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRMCMEAPMCEN*AWPMAPANTKA Trigger: GGCCTTGGTATTTGCTGGAGCCATTGGCCAGGCGCAGTTCTCACACATGGGTGCCTCCATGCACATGCGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS CCA 72 bp | CCGGGACTGGTTGAAGATCCTCACACCGGCCCAGCATaGGACCAGCATGTACAGGATGGCGAGGAAGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGLVEDPHTGPA*DQHVQDGEEEG Trigger: ACCTTCTTCCTCGCCATCCTGTACATGCTGGTCCCATGCTGGGCCGGTGTGAGGATCTTCAACCAGTCCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS CCA 72 bp | TCACTGCTGCTTCTTGTCTTGGTCCTGTGGCGAAGATaGCAGCGCTGCATGCAAGAAGAAGGCGGGCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLLLLVLVLWRR*QRCMQEEGGPP Trigger: TGGCGGCCCGCCTTCTTCTTGCATGCAGCGCTGCCATCTTCGCCACAGGACCAAGACAAGAAGCAGCAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS CCA 72 bp | ATGTGCATGGAGGCACCCATGTGTGAGAACTGCGCCTaGCCAATGGCTCCAGCAAATACCAAGGCCCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: MCMEAPMCENCA*PMAPANTKAQS Trigger: GGACTGGGCCTTGGTATTTGCTGGAGCCATTGGCCAGGCGCAGTTCTCACACATGGGTGCCTCCATGCACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS CCA 72 bp | CAGGTTGCTCAGAAAGAAGGTAGCCCAGGTGTCCTCTaGCACGCGGTAGGTGAAGGGTGTGCGCATGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: QVAQKEGSPGVL*HAVGEGCAHVH Trigger: ATGCACATGCGCACACCCTTCACCTACCGCGTGCCAGAGGACACCTGGGCTACCTTCTTTCTGAGCAACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS CAA 72 bp | AAAGCCAGCAGGTGGGGACCCAGTGCCAATAGCAGGTaGCTCAGAAAGAAGGTAGCCCAGGTGTCCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KASRWGPSANSR*LRKKVAQVSSG Trigger: GCCAGAGGACACCTGGGCTACCTTCTTTCTGAGCAACCTGCTATTGGCACTGGGTCCCCACCTGCTGGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS GCA 72 bp | CTTCTGTTCTTCCATGTCAGGGGTATAGGAGGTTGGTaGCCGGGACTGGTTGAAGATCCTCACACCGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLFFHVRGIGGW*PGLVEDPHTGP Trigger: TGGGCCGGTGTGAGGATCTTCAACCAGTCCCGGGCACCAACCTCCTATACCCCTGACATGGAAGAACAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049197.6 |
||
| CDS GCA 72 bp | TTCTTCCTGTACCATGTCAGGGGTATAGGAGGTTGGTaGCCGGGACTGGTTGAAGATCCTCACACCGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: FFLYHVRGIGGW*PGLVEDPHTGP Trigger: TGGGCCGGTGTGAGGATCTTCAACCAGTCCCGGGCACCAACCTCCTATACCCCTGACATGGTACAGGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110160.9 |
||
| CDS CCA 72 bp | CAAGGATGTTTCCCGGGAGAAACACCAGGATGCTCATaGCGAAGGATCCCAGCCAGTAGAGCCCAAGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QGCFPGETPGCS*RRIPASRAQGS Trigger: GGAACCTTGGGCTCTACTGGCTGGGATCCTTCGCCATGAGCATCCTGGTGTTTCTCCCGGGAAACATCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS TCA 72 bp | AGAGCAGGTAGTGCACAGTACCATCCCAGTAGCAGATaGAGATGCCATGTGCTGTGCGTAGGTAGGGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RAGSAQYHPSSR*RCHVLCVGRAH Trigger: GTGAGCCCTACCTACGCACAGCACATGGCATCTTCATCTGCTACTGGGATGGTACTGTGCACTACCTGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS GCA 72 bp | GCCAGTAGAGCCCAAGGTTCCGGTACCTTTTCCTTTTaGGGATGGCACCAGCCATTGTCAGATAGAGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ASRAQGSGTFSF*GWHQPLSDRAG Trigger: ACCTGCTCTATCTGACAATGGCTGGTGCCATCCGCAAAAGGAAAAGGTACCGGAACCTTGGGCTCTACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS CAA 90 bp | GCCCAAGGTTCCGGTACCTTTTCCTTTTGCGGATGGCACCAGCCATaGTCAGATAGAGCAGGTAGTGCACAGTACCATCCCAGTAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AQGSGTFSFCGWHQP*SDRAGSAQYHPSSR Trigger: TCTGCTACTGGGATGGTACTGTGCACTACCTGCTCTATCTGACAATGGCTGGTGCCATCCGCAAAAGGAAAAGGTACCGGAACCTTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS GCA 72 bp | ATTTACCAAGGATGTTTCCCGGGAGAAACACCAGGATaGTCATGGCGAAGGATCCCAGCCAGTAGAGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: IYQGCFPGETPG*SWRRIPASRAQ Trigger: TTGGGCTCTACTGGCTGGGATCCTTCGCCATGAGCATCCTGGTGTTTCTCCCGGGAAACATCCTTGGTAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS GCA 72 bp | AAGTACCACCAGACCCCGGAAGACAGTGAAGAGCGCTaGAAAGATGAGGTATACTATGAGTGCCAGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KYHQTPEDSEER*KDEVYYECQVS Trigger: GCTGACCTGGCACTCATAGTATACCTCATCTTTGCAGCGCTCTTCACTGTCTTCCGGGGTCTGGTGGTACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS CAA 72 bp | TCCGGTACCTTTTCCTTTTGCGGATGGCACCAGCCATaGTCAGATAGAGCAGGTAGTGCACAGTACCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: SGTFSFCGWHQP*SDRAGSAQYHP Trigger: GGGATGGTACTGTGCACTACCTGCTCTATCTGACAATGGCTGGTGCCATCCGCAAAAGGAAAAGGTACCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS GCA 72 bp | ATCCATGAAGCCCATCATGTAGCCATCTTCTTGGAGTaGAATGACAAGGTCCACCACCGAGGTGAAGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: IHEAHHVAIFLE*NDKVHHRGEGE Trigger: TTCTCCTTCACCTCGGTGGTGGACCTTGTCATTGCACTCCAAGAAGATGGCTACATGATGGGCTTCATGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS GCA 72 bp | AGTGAAGAGCGCTGCAAAGATGAGGTATACTATGAGTaGCAGGTCAGCCGGACGCTGGAAGAGACTTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SEERCKDEVYYE*QVSRTLEETFL Trigger: AAGAAAAGTCTCTTCCAGCGTCCGGCTGACCTGGCACTCATAGTATACCTCATCTTTGCAGCGCTCTTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS CAA 90 bp | CTCCTTGGTGTAGAAATCCATGAAGCCCATCATGTAGCCATCTTCTaGGAGTGCAATGACAAGGTCCACCACCGAGGTGAAGGAGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLGVEIHEAHHVAIF*ECNDKVHHRGEGED Trigger: ATCTTCTCCTTCACCTCGGTGGTGGACCTTGTCATTGCACTCCAAGAAGATGGCTACATGATGGGCTTCATGGATTTCTACACCAAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
||
| CDS TCA 72 bp | AGAAGATCACAAAGACAGCATAGAGAGGGTCGTAGGTaGTCTCCCCATGAGATAGGCTATAGACTGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: RRSQRQHREGRR*SPHEIGYRLPG Trigger: TCCTGGCAGTCTATAGCCTATCTCATGGGGAGATCACCTACGACCCTCTCTATGCTGTCTTTGTGATCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS TCA 72 bp | GGTCCCGAAGGTATGGCTCATATTGGTAAATATAGATaGAGCAGGCATCTGTGGGGCAGTCAAGTACCACCA | + |
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Preference number: 6 (lower is better) Translates to: GPEGMAHIGKYR*SRHLWGSQVPP Trigger: TGGTGGTACTTGACTGCCCCACAGATGCCTGCTTCATCTATATTTACCAATATGAGCCATACCTTCGGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS CCA 72 bp | CTGCAACTTTGGGTAGGCCACAGGGTCCCGAAGGTATaGCTCATATTGGTAAATATAGATGAAGCAGGCATC | + |
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Preference number: 6 (lower is better) Translates to: LQLWVGHRVPKV*LILVNIDEAGI Trigger: GATGCCTGCTTCATCTATATTTACCAATATGAGCCATACCTTCGGGACCCTGTGGCCTACCCAAAGTTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS CAA 72 bp | GTAGAAATCCATGAAGCCCATCATGTAGCCATCTTCTaGGAGTGCAATGACAAGGTCCACCACCGAGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: VEIHEAHHVAIF*ECNDKVHHRGE Trigger: TTCACCTCGGTGGTGGACCTTGTCATTGCACTCCAAGAAGATGGCTACATGATGGGCTTCATGGATTTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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| CDS CAA 72 bp | GTAGAGCATAGAACAAATACATCAGCATCTGCAACTTaGGGTAGGCCACAGGGTCCCGAAGGTATGGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: VEHRTNTSASAT*GRPQGPEGMAH Trigger: ATGAGCCATACCTTCGGGACCCTGTGGCCTACCCAAAGTTGCAGATGCTGATGTATTTGTTCTATGCTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049197.6 ENSMUST00000110160.9 |
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