Pregenerated sensors for TM2D3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078681Ensembl transcript IDs: ENSMUST00000032726.14, ENSMUST00000065574.9, ENSMUST00000107495.5, ENSMUST00000129166.3, ENSMUST00000206361.2, ENSMUST00000206517.2, ENSMUST00000206628.2, ENSMUST00000206837.2, ENSMUST00000206934.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGTCCGGTTGCCCAGGCAGTGAATGTGGTCACGCACGGTGCAGTTaGCGAAATAGCGCTGCCGAGGGCAAGCCACGGTCATGCAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: KSGCPGSECGHARCS*RNSAAEGKPRSCRW Trigger: CCACCTGCATGACCGTGGCTTGCCCTCGGCAGCGCTATTTCGCCAACTGCACCGTGCGTGACCACATTCACTGCCTGGGCAACCGGACTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206934.2 |
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| 3UTR TCA 90 bp | TCAGCAAGACATCGATTAGGGTCCATATTCCCAGGCCGCCAAAGCTaGAGAGCTTGCCGAGGCCTTCTCGCCACTGGCCCAGGTAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: SARHRLGSIFPGRQS*RACRGLLATGPGRS Trigger: GCTTCTACCTGGGCCAGTGGCGAGAAGGCCTCGGCAAGCTCTTCAGCTTTGGCGGCCTGGGAATATGGACCCTAATCGATGTCTTGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206934.2 |
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| 3UTR GCA 90 bp | TCCCCCTCTCACACCGCATCCATCTCCACACACAGGACTCTACACTaGTCTCTGAAGCACATAACCTCGGCTAAATGTACAAAGAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: SPSHTASISTHRTLH*SLKHITSAKCTKSH Trigger: ATGGCTCTTTGTACATTTAGCCGAGGTTATGTGCTTCAGAGAGCAGTGTAGAGTCCTGTGTGTGGAGATGGATGCGGTGTGAGAGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206934.2 |
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| 3UTR-3UTR GCA 90 bp | GATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACATTAGGCAAGCCACGGTCATaGAGGTGGTGGAATTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: DFFILPSSRQAKYRCCTLGKPRS*RWWNLN Trigger: GTTCAAATTCCACCACCTGCATGACCGTGGCTTGCC...TAATGTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206934.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGCGGTCATGCAGGTGGTaGAATTTGAACACTCGTAGT | + |
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Preference number: 2 (lower is better) Translates to: SVRFLYFTFIKASQVQMLRSCRW*NLNTRS Trigger: ACTACGAGTGTTCAAATTCCACCACCTGCATGACCG...CAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206934.2 |
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| 3UTR GCA 72 bp | TCCGGTTGCCCAGGCAGTGAATGTGGTCACGCACGGTaGAGTTGGCGAAATAGCGCTGCCGAGGGCAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: SGCPGSECGHAR*SWRNSAAEGKP Trigger: TGGCTTGCCCTCGGCAGCGCTATTTCGCCAACTGCACCGTGCGTGACCACATTCACTGCCTGGGCAACCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206934.2 |
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| 3UTR CCA 72 bp | TGCCCAGGCAGTGAATGTGGTCACGCACGGTGCAGTTaGCGAAATAGCGCTGCCGAGGGCAAGCCACGGTCA | + |
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Preference number: 3 (lower is better) Translates to: CPGSECGHARCS*RNSAAEGKPRS Trigger: TGACCGTGGCTTGCCCTCGGCAGCGCTATTTCGCCAACTGCACCGTGCGTGACCACATTCACTGCCTGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206934.2 |
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| 3UTR TCA 72 bp | CATCGATTAGGGTCCATATTCCCAGGCCGCCAAAGCTaGAGAGCTTGCCGAGGCCTTCTCGCCACTGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: HRLGSIFPGRQS*RACRGLLATGP Trigger: TGGGCCAGTGGCGAGAAGGCCTCGGCAAGCTCTTCAGCTTTGGCGGCCTGGGAATATGGACCCTAATCGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206934.2 |
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| CDS-3UTR GCA 90 bp | CCCTCTCACACCGCATCCATCTCCACACACAGGACTCTACACTGCTCTCTGAAGCAGGCTTCCCGTAAGTaGAGGAGACATTGGTCGCAC | + |
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Preference number: 4 (lower is better) Translates to: PSHTASISTHRTLHCSLKQASRK*RRHWSH Trigger: GTGCGACCAATGTCTCCTGCACTTACGGGAAGCCTG...CTTCAGAGAGCAGTGTAGAGTCCTGTGTGTGGAGATGGATGCGGTGTGAGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR TCA 90 bp | ATGCTGTACATTAAAAACATAAATCCCCCTCTCACACCGCATCCATCTCCACACCCAGGCCGCCAAAGCTaGAGAGCTTGCCGAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: MLYIKNINPPLTPHPSPHPGRQS*RACRGL Trigger: AAGGCCTCGGCAAGCTCTTCAGCTTTGGCGGCCTGG...GTGTGGAGATGGATGCGGTGTGAGAGGGGGATTTATGTTTTTAATGTACAGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | CTCTCACACCGCATCCATCTCCACACACAGGACTCTACACTGCTCTCTGAAGCAGCCAGCGGCTGCGAATaGTCTAAATTTAAGGATCCA | + |
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Preference number: 4 (lower is better) Translates to: LSHRIHLHTQDSTLLSEAASGCE*SKFKDP Trigger: TGGATCCTTAAATTTAGAGCATTCGCAGCCGCTGGC...TGCTTCAGAGAGCAGTGTAGAGTCCTGTGTGTGGAGATGGATGCGGTGTGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR CCA 90 bp | ATGCTGTACATTAAAAACATAAATCCCCCTCTCACACCGCATCCATCTCCACACCACGCACGGTGCAGTTaGCGAAATAGCGCTGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: MLYIKNINPPLTPHPSPHHARCS*RNSAAE Trigger: CTCGGCAGCGCTATTTCGCCAACTGCACCGTGCGTG...GTGTGGAGATGGATGCGGTGTGAGAGGGGGATTTATGTTTTTAATGTACAGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR TCA 90 bp | CTGTACATTAAAAACATAAATCCCCCTCTCACACCGCATCCATCTCCACACACAGGATCCTTTATTGCCTaGGCCAGCGGCTGCGAATGC | + |
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Preference number: 4 (lower is better) Translates to: LYIKNINPPLTPHPSPHTGSFIA*ASGCEC Trigger: GCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCC...TGTGTGTGGAGATGGATGCGGTGTGAGAGGGGGATTTATGTTTTTAATGTACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR TCA 90 bp | CTCTCACACCGCATCCATCTCCACACACAGGACTCTACACTGCTCTCTGAAGCATTTCAGTACTTTCTGTaGGGTGAGAGAACAGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LSHRIHLHTQDSTLLSEAFQYFL*GERTAD Trigger: ATCAGCTGTTCTCTCACCTCACAGAAAGTACTGAAA...TGCTTCAGAGAGCAGTGTAGAGTCCTGTGTGTGGAGATGGATGCGGTGTGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 |
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| CDS-3UTR GCA 90 bp | CTCTCACACCGCATCCATCTCCACACACAGGACTCTACACTGCTCTCTGAAGCATGCTACACAAACCATTaGTTGGACACTTCGTCATGT | + |
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Preference number: 4 (lower is better) Translates to: LSHRIHLHTQDSTLLSEACYTNH*LDTSSC Trigger: ACATGACGAAGTGTCCAAGCAATGGTTTGTGTAGCA...TGCTTCAGAGAGCAGTGTAGAGTCCTGTGTGTGGAGATGGATGCGGTGTGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR TCA 90 bp | CGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACATTCCAGGCCGCCAAAGCTaGAGAGCTTGCCGAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: RFLYFTFIKASQVQMLYIPGRQS*RACRGL Trigger: AAGGCCTCGGCAAGCTCTTCAGCTTTGGCGGCCTGG...AATGTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | GTGGTTCAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGCCCGGATCCTTTATTaGCTGAGCCAGCGGCTGCGA | + |
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Preference number: 4 (lower is better) Translates to: VVQCSISLFYLHQGKPSTARILY*LSQRLR Trigger: TCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGC...TGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTGAACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 |
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| CDS-3UTR GCA 90 bp | CAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGCCCGGATCCTTTATTaGCTGAGCCAGCGGCTGCGA | + |
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Preference number: 4 (lower is better) Translates to: QCSISLFYLHQGKPSTDAARILY*LSQRLR Trigger: TCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGC...AGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR CCA 90 bp | CAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTCACGCACGGTGCAGTTaGCGAAATAGCGCTGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: QCSISLFYLHQGKPSTDAHARCS*RNSAAE Trigger: CTCGGCAGCGCTATTTCGCCAACTGCACCGTGCGTG...AGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR CCA 90 bp | TTGTCGTGGTTCAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAACACGCACGGTGCAGTTaGCGAAATAGCGCTGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: LSWFSVRFLYFTFIKASQHARCS*RNSAAE Trigger: CTCGGCAGCGCTATTTCGCCAACTGCACCGTGCGTG...TTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTGAACCACGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 |
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| CDS-3UTR TCA 90 bp | TCAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCGGATCCTTTATTGCCTaGGCCAGCGGCTGCGAATGC | + |
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Preference number: 4 (lower is better) Translates to: SVFDFFILPSSRQAKYRCGSFIA*ASGCEC Trigger: GCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCC...GCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | TTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACAGCCCGGATCCTTTATTaGCTGAGCCAGCGGCTGCGA | + |
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Preference number: 4 (lower is better) Translates to: FDFFILPSSRQAKYRCCTARILY*LSQRLR Trigger: TCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGC...TGTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | CTGTACATTAAAAACATAAATCCCCCTCTCACACCGCATCCATCTCCACACACAGAACAGCTGATTCTCTaGTGCCCTGGGAACTACAGA | + |
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Preference number: 4 (lower is better) Translates to: LYIKNINPPLTPHPSPHTEQLIL*CPGNYR Trigger: TCTGTAGTTCCCAGGGCAGCAGAGAATCAGCTGTTC...TGTGTGTGGAGATGGATGCGGTGTGAGAGGGGGATTTATGTTTTTAATGTACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 |
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| CDS-3UTR TCA 90 bp | CGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACATTGGATCCTTTATTGCCTaGGCCAGCGGCTGCGAATGC | + |
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Preference number: 4 (lower is better) Translates to: RFLYFTFIKASQVQMLYIGSFIA*ASGCEC Trigger: GCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCC...AATGTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | GTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACCAGGCTTCCCGTAAGTaGAGGAGACATTGGTCGCAC | + |
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Preference number: 4 (lower is better) Translates to: VRFLYFTFIKASQVQMLYQASRK*RRHWSH Trigger: GTGCGACCAATGTCTCCTGCACTTACGGGAAGCCTG...GTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | AGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGCAGGCTTCCCGTAAGTaGAGGAGACATTGGTCGCAC | + |
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Preference number: 4 (lower is better) Translates to: SVRFLYFTFIKASQVQMLQASRK*RRHWSH Trigger: GTGCGACCAATGTCTCCTGCACTTACGGGAAGCCTG...CAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | CTGTACATTAAAAACATAAATCCCCCTCTCACACCGCATCCATCTCCACACACATCTGTTTCAGGAAGCTaGCAGCAAAACCTGCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LYIKNINPPLTPHPSPHTSVSGS*QQNLQV Trigger: GACTTGCAGGTTTTGCTGGCAGCTTCCTGAAACAGA...TGTGTGTGGAGATGGATGCGGTGTGAGAGGGGGATTTATGTTTTTAATGTACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | AGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGGGCAAGCCACGGTCATaGAGGTGGTGGAATTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SVRFLYFTFIKASQVQMLGKPRS*RWWNLN Trigger: GTTCAAATTCCACCACCTGCATGACCGTGGCTTGCC...CAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | TCAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCGGCAAGCCACGGTCATaGAGGTGGTGGAATTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SVFDFFILPSSRQAKYRCGKPRS*RWWNLN Trigger: GTTCAAATTCCACCACCTGCATGACCGTGGCTTGCC...GCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | ATGCTGTACATTAAAAACATAAATCCCCCTCTCACACCGCATCCATCTCCACACGATTTCAGTACTTTCTaGTGCCCTGGGAACTACAGA | + |
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Preference number: 4 (lower is better) Translates to: MLYIKNINPPLTPHPSPHDFSTF*CPGNYR Trigger: TCTGTAGTTCCCAGGGCAGCAGAAAGTACTGAAATC...GTGTGGAGATGGATGCGGTGTGAGAGGGGGATTTATGTTTTTAATGTACAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | TTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACAGGCAAGCCACGGTCATaGAGGTGGTGGAATTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: FDFFILPSSRQAKYRCCTGKPRS*RWWNLN Trigger: GTTCAAATTCCACCACCTGCATGACCGTGGCTTGCC...TGTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | GTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACTCTGTTTCAGGAAGCTaGCAGCAAAACCTGCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: VRFLYFTFIKASQVQMLYSVSGS*QQNLQV Trigger: GACTTGCAGGTTTTGCTGGCAGCTTCCTGAAACAGA...GTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | GGTTCAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGAGCCAGCGGCTGCGAATaGTCTAAATTTAAGGATCCA | + |
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Preference number: 4 (lower is better) Translates to: GSVFDFFILPSSRQAKYRASGCE*SKFKDP Trigger: TGGATCCTTAAATTTAGAGCATTCGCAGCCGCTGGC...TCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 |
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| CDS-3UTR CCA 90 bp | TCAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCAGAGAATGTACGTGTTaGGCCCGGATCCTTTATTGC | + |
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Preference number: 4 (lower is better) Translates to: SVFDFFILPSSRQAKYRCRECTC*ARILYC Trigger: GCAATAAAGGATCCGGGCCCAACACGTACATTCTCT...GCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR CCA 90 bp | AGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGAGAGAATGTACGTGTTaGGCCCGGATCCTTTATTGC | + |
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Preference number: 4 (lower is better) Translates to: SVRFLYFTFIKASQVQMLRECTC*ARILYC Trigger: GCAATAAAGGATCCGGGCCCAACACGTACATTCTCT...CAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | CGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACATTTCTGTTTCAGGAAGCTaGCAGCAAAACCTGCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: RFLYFTFIKASQVQMLYISVSGS*QQNLQV Trigger: GACTTGCAGGTTTTGCTGGCAGCTTCCTGAAACAGA...AATGTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | TTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACAGCCAGCGGCTGCGAATaGTCTAAATTTAAGGATCCA | + |
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Preference number: 4 (lower is better) Translates to: FDFFILPSSRQAKYRCCTASGCE*SKFKDP Trigger: TGGATCCTTAAATTTAGAGCATTCGCAGCCGCTGGC...TGTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR GCA 90 bp | GATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACATTAGAACAGCTGATTCTCTaGTGCCCTGGGAACTACAGA | + |
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Preference number: 4 (lower is better) Translates to: DFFILPSSRQAKYRCCTLEQLIL*CPGNYR Trigger: TCTGTAGTTCCCAGGGCAGCAGAGAATCAGCTGTTC...TAATGTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 |
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| CDS-3UTR CCA 90 bp | CGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACATTAGAGAATGTACGTGTTaGGCCCGGATCCTTTATTGC | + |
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Preference number: 4 (lower is better) Translates to: RFLYFTFIKASQVQMLYIRECTC*ARILYC Trigger: GCAATAAAGGATCCGGGCCCAACACGTACATTCTCT...AATGTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR TCA 90 bp | AGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTTTCAGTACTTTCTGTaGGGTGAGAGAACAGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: SVRFLYFTFIKASQVQMLFQYFL*GERTAD Trigger: ATCAGCTGTTCTCTCACCTCACAGAAAGTACTGAAA...CAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 |
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| CDS-3UTR GCA 90 bp | CAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTTGCTACACAAACCATTaGTTGGACACTTCGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: QCSISLFYLHQGKPSTDACYTNH*LDTSSC Trigger: ACATGACGAAGTGTCCAAGCAATGGTTTGTGTAGCA...AGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGCTACACAAACCATTaGTTGGACACTTCGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SVFDFFILPSSRQAKYRCCYTNH*LDTSSC Trigger: ACATGACGAAGTGTCCAAGCAATGGTTTGTGTAGCA...GCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR CCA 90 bp | TTGTCGTGGTTCAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAACACAAACCATTGCTTaGACACTTCGTCATGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSWFSVRFLYFTFIKASQTQTIA*TLRHVR Trigger: CCTTACATGACGAAGTGTCCAAGCAATGGTTTGTGT...TTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTGAACCACGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 |
||
| CDS-3UTR CCA 90 bp | GTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACACACAAACCATTGCTTaGACACTTCGTCATGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRFLYFTFIKASQVQMLYTQTIA*TLRHVR Trigger: CCTTACATGACGAAGTGTCCAAGCAATGGTTTGTGT...GTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGACATTCTATACAGTCTaGAGGAAGTCTGCTACACAA | + |
|
Preference number: 4 (lower is better) Translates to: SVRFLYFTFIKASQVQMLTFYTV*RKSATQ Trigger: TTGTGTAGCAGACTTCCTGCAGACTGTATAGAATGT...CAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
||
| CDS-3UTR CCA 90 bp | TTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACAACACAAACCATTGCTTaGACACTTCGTCATGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FDFFILPSSRQAKYRCCTTQTIA*TLRHVR Trigger: CCTTACATGACGAAGTGTCCAAGCAATGGTTTGTGT...TGTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
||
| CDS-3UTR CCA 90 bp | GTTCAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATACACAAACCATTGCTTaGACACTTCGTCATGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQCSISLFYLHQGKPSTDTQTIA*TLRHVR Trigger: CCTTACATGACGAAGTGTCCAAGCAATGGTTTGTGT...ATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 |
||
| CDS-3UTR TCA 90 bp | GATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACATTATTTCAGTACTTTCTGTaGGGTGAGAGAACAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DFFILPSSRQAKYRCCTLFQYFL*GERTAD Trigger: ATCAGCTGTTCTCTCACCTCACAGAAAGTACTGAAA...TAATGTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 |
||
| CDS-3UTR GCA 90 bp | GTTCAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATACATTCTATACAGTCTaGAGGAAGTCTGCTACACAA | + |
|
Preference number: 4 (lower is better) Translates to: VQCSISLFYLHQGKPSTDTFYTV*RKSATQ Trigger: TTGTGTAGCAGACTTCCTGCAGACTGTATAGAATGT...ATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 |
||
| CDS-3UTR CAA 90 bp | CTCTCACACCGCATCCATCTCCACACACAGGACTCTACACTGCTCTCTGAAGCAGGCCCGGATCCTTTATaGCCTGAGCCAGCGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSHRIHLHTQDSTLLSEAGPDPL*PEPAAA Trigger: CGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCC...TGCTTCAGAGAGCAGTGTAGAGTCCTGTGTGTGGAGATGGATGCGGTGTGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
||
| CDS CCA 90 bp | CAGCTGATTCTCTGCTGCCCTGGGAACTACAGAGAATGTACGTGTTaGGCCCGGATCCTTTATTGCCTGAGCCAGCGGCTGCGAATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QLILCCPGNYRECTC*ARILYCLSQRLRML Trigger: GAGCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGTAGTTCCCAGGGCAGCAGAGAATCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206837.2 |
||
| CDS GCA 90 bp | CGGTGCAGTTGGCGAAATAGCGCTGCCGAGGGCAAGCCACGGTCATaGAGGTGGTGGAATTTGAACACTCGTAGTCTGTTTCAGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RCSWRNSAAEGKPRS*RWWNLNTRSLFQEA Trigger: AGCTTCCTGAAACAGACTACGAGTGTTCAAATTCCACCACCTGCATGACCGTGGCTTGCCCTCGGCAGCGCTATTTCGCCAACTGCACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206361.2 ENSMUST00000206517.2 ENSMUST00000206628.2 |
||
| CDS CCA 90 bp | AGTTGGCGAAATAGCGCTGCCGAGGGCAAGCCACGGTCATGCAGGTaGTGGAATTTGAACACTCGTAGTCTGTTTCAGGAAGCTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SWRNSAAEGKPRSCR*WNLNTRSLFQEAAS Trigger: GCTGGCAGCTTCCTGAAACAGACTACGAGTGTTCAAATTCCACCACCTGCATGACCGTGGCTTGCCCTCGGCAGCGCTATTTCGCCAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206361.2 ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS TCA 90 bp | ATAGCGCTGCCGAGGGCAAGCCACGGTCATGCAGGTGGTGGAATTTaGACACTCGTAGTCTGTTTCAGGAAGCTGCCAGCAAAACCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IALPRASHGHAGGGI*TLVVCFRKLPAKPA Trigger: TGCAGGTTTTGCTGGCAGCTTCCTGAAACAGACTACGAGTGTTCAAATTCCACCACCTGCATGACCGTGGCTTGCCCTCGGCAGCGCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206361.2 ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS GCA 90 bp | CCTGGGAACTACAGAGAATGTACGTGTTGGGCCCGGATCCTTTATTaGCTGAGCCAGCGGCTGCGAATGCTCATCTCCCGACAGAATGTA | + |
|
Preference number: 5 (lower is better) Translates to: PGNYRECTCWARILY*LSQRLRMLISRQNV Trigger: TACATTCTGTCGGGAGATGAGCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGTAGTTCCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206628.2 ENSMUST00000206837.2 |
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| CDS CCA 90 bp | TGGCGAAATAGCGCTGCCGAGGGCAAGCCACGGTCATGCAGGTGGTaGAATTTGAACACTCGTAGTCTGTTTCAGGAAGCTGCCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: WRNSAAEGKPRSCRW*NLNTRSLFQEAASK Trigger: TTTGCTGGCAGCTTCCTGAAACAGACTACGAGTGTTCAAATTCCACCACCTGCATGACCGTGGCTTGCCCTCGGCAGCGCTATTTCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206361.2 ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS CCA 90 bp | TTCAGTACTTTCTGCTGCCCTGGGAACTACAGAGAATGTACGTGTTaGGCCCGGATCCTTTATTGCCTGAGCCAGCGGCTGCGAATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSTFCCPGNYRECTC*ARILYCLSQRLRML Trigger: GAGCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGTAGTTCCCAGGGCAGCAGAAAGTACTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS-3UTR CAA 90 bp | CCAGTTGCAGTACAGCAGCTTAGGGAAAGTCCGGTTGCCCAGGCAGTGAATGTGAACCTGCAAGTCATGTaGATGACGAAGTTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PVAVQQLRESPVAQAVNVNLQVM*MTKFLW Trigger: CCAGAGGAACTTCGTCATCAACATGACTTGCAGGTT...CACATTCACTGCCTGGGCAACCGGACTTTCCCTAAGCTGCTGTACTGCAACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206934.2 |
||
| CDS TCA 90 bp | GGAACTACAGAGAATGTACGTGTTGGGCCCGGATCCTTTATTGCCTaGGCCAGCGGCTGCGAATGCTCTAAATTTAAGGATCCATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GTTENVRVGPGSFIA*ASGCECSKFKDPSP Trigger: GGGAGATGGATCCTTAAATTTAGAGCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGTAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206517.2 |
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| CDS-3UTR CAA 90 bp | CCCTCTCACACCGCATCCATCTCCACACACAGGACTCTACACTGCTCTCTGAAGTACACAAACCATTGCTaGGACACTTCGTCATGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSHTASISTHRTLHCSLKYTNHC*DTSSCK Trigger: CTTACATGACGAAGTGTCCAAGCAATGGTTTGTGTA...CTTCAGAGAGCAGTGTAGAGTCCTGTGTGTGGAGATGGATGCGGTGTGAGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR CAA 90 bp | CTCTCACACCGCATCCATCTCCACACACAGGACTCTACACTGCTCTCTGAAGCATGCAGGTGGTGGAATTaGAACACTCGTAGTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSHRIHLHTQDSTLLSEACRWWN*NTRSLF Trigger: AAACAGACTACGAGTGTTCAAATTCCACCACCTGCA...TGCTTCAGAGAGCAGTGTAGAGTCCTGTGTGTGGAGATGGATGCGGTGTGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR CAA 90 bp | GTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACGGCCCGGATCCTTTATaGCCTGAGCCAGCGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VRFLYFTFIKASQVQMLYGPDPL*PEPAAA Trigger: CGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCC...GTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR CAA 90 bp | GATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACATTAGGCCCGGATCCTTTATaGCCTGAGCCAGCGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: DFFILPSSRQAKYRCCTLGPDPL*PEPAAA Trigger: CGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCC...TAATGTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR CAA 90 bp | ATGCTGTACATTAAAAACATAAATCCCCCTCTCACACCGCATCCATCTCCACACAACCTGCAAGTCATGTaGATGACGAAGTTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MLYIKNINPPLTPHPSPHNLQVM*MTKFLW Trigger: CCAGAGGAACTTCGTCATCAACATGACTTGCAGGTT...GTGTGGAGATGGATGCGGTGTGAGAGGGGGATTTATGTTTTTAATGTACAGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 ENSMUST00000206934.2 |
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| CDS-3UTR CAA 90 bp | ATGCTGTACATTAAAAACATAAATCCCCCTCTCACACCGCATCCATCTCCACACTGCAGGTGGTGGAATTaGAACACTCGTAGTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: MLYIKNINPPLTPHPSPHCRWWN*NTRSLF Trigger: AAACAGACTACGAGTGTTCAAATTCCACCACCTGCA...GTGTGGAGATGGATGCGGTGTGAGAGGGGGATTTATGTTTTTAATGTACAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR CAA 90 bp | CAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTCAGAGAATGTACGTGTaGGGCCCGGATCCTTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: QCSISLFYLHQGKPSTDAQRMYV*GPDPLL Trigger: CAATAAAGGATCCGGGCCCAACACGTACATTCTCTG...AGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR CAA 90 bp | AGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGCTGCTACACAAACCATaGCTTGGACACTTCGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SVRFLYFTFIKASQVQMLLLHKP*LGHFVM Trigger: CATGACGAAGTGTCCAAGCAATGGTTTGTGTAGCAG...CAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR CAA 90 bp | GTGGTTCAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACACTGCTACACAAACCATaGCTTGGACACTTCGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: VVQCSISLFYLHQGKPSTLLHKP*LGHFVM Trigger: CATGACGAAGTGTCCAAGCAATGGTTTGTGTAGCAG...TGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTGAACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 |
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| CDS-3UTR CAA 90 bp | TCAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCAACCTGCAAGTCATGTaGATGACGAAGTTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SVFDFFILPSSRQAKYRCNLQVM*MTKFLW Trigger: CCAGAGGAACTTCGTCATCAACATGACTTGCAGGTT...GCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR CAA 90 bp | GGTTCAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGAAACCTGCAAGTCATGTaGATGACGAAGTTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSVFDFFILPSSRQAKYRNLQVM*MTKFLW Trigger: CCAGAGGAACTTCGTCATCAACATGACTTGCAGGTT...TCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 |
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| CDS-3UTR CAA 90 bp | GTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACAACCTGCAAGTCATGTaGATGACGAAGTTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VRFLYFTFIKASQVQMLYNLQVM*MTKFLW Trigger: CCAGAGGAACTTCGTCATCAACATGACTTGCAGGTT...GTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 ENSMUST00000206934.2 |
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| CDS-3UTR CAA 90 bp | CGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACATTCAGAGAATGTACGTGTaGGGCCCGGATCCTTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: RFLYFTFIKASQVQMLYIQRMYV*GPDPLL Trigger: CAATAAAGGATCCGGGCCCAACACGTACATTCTCTG...AATGTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
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| CDS-3UTR CAA 90 bp | GTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACTGCAGGTGGTGGAATTaGAACACTCGTAGTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VRFLYFTFIKASQVQMLYCRWWN*NTRSLF Trigger: AAACAGACTACGAGTGTTCAAATTCCACCACCTGCA...GTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
||
| CDS-3UTR CAA 90 bp | TTGTCGTGGTTCAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAATGCAGGTGGTGGAATTaGAACACTCGTAGTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSWFSVRFLYFTFIKASQCRWWN*NTRSLF Trigger: AAACAGACTACGAGTGTTCAAATTCCACCACCTGCA...TTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTGAACCACGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 |
||
| CDS-3UTR CAA 90 bp | GATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACATTACAGAGAATGTACGTGTaGGGCCCGGATCCTTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: DFFILPSSRQAKYRCCTLQRMYV*GPDPLL Trigger: CAATAAAGGATCCGGGCCCAACACGTACATTCTCTG...TAATGTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
||
| CDS-3UTR CAA 90 bp | GTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACAGATGCTGTACTACACAAACCATTGCTaGGACACTTCGTCATGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VRFLYFTFIKASQVQMLYYTNHC*DTSSCK Trigger: CTTACATGACGAAGTGTCCAAGCAATGGTTTGTGTA...GTACAGCATCTGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000206517.2 |
||
| CDS-3UTR CAA 90 bp | GTGGTTCAGTGTTCGATTTCTTTATTTTACCTTCATCAAGGCAAGCCAAGTACATACACAAACCATTGCTaGGACACTTCGTCATGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VVQCSISLFYLHQGKPSTYTNHC*DTSSCK Trigger: CTTACATGACGAAGTGTCCAAGCAATGGTTTGTGTA...TGTACTTGGCTTGCCTTGATGAAGGTAAAATAAAGAAATCGAACACTGAACCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 |
||
| CDS CCA 72 bp | TACCCAGGCAGTGAATGTGGTCACGCACGGTGCAGTTaGCGAAATAGCGCTGCCGAGGGCAAGCCACGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: YPGSECGHARCS*RNSAAEGKPRS Trigger: TGACCGTGGCTTGCCCTCGGCAGCGCTATTTCGCCAACTGCACCGTGCGTGACCACATTCACTGCCTGGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129166.3 ENSMUST00000206628.2 |
||
| CDS GCA 72 bp | GTTCCTTACCCAGGCAGTGAATGTGGTCACGCACGGTaGAGTTGGCGAAATAGCGCTGCCGAGGGCAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VPYPGSECGHAR*SWRNSAAEGKP Trigger: TGGCTTGCCCTCGGCAGCGCTATTTCGCCAACTGCACCGTGCGTGACCACATTCACTGCCTGGGTAAGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129166.3 |
||
| CDS CCA 72 bp | CTCTGCTGCCCTGGGAACTACAGAGAATGTACGTGTTaGGCCCGGATCCTTTATTGCCTGAGCCAGCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LCCPGNYRECTC*ARILYCLSQRL Trigger: CAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGTAGTTCCCAGGGCAGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206837.2 |
||
| CDS TCA 72 bp | GAGAATGTACGTGTTGGGCCCGGATCCTTTATTGCCTaGGCCAGCGGCTGCGAATGCTCATCTCCCGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: ENVRVGPGSFIA*ASGCECSSPDR Trigger: TCTGTCGGGAGATGAGCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206628.2 ENSMUST00000206837.2 |
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| CDS CCA 72 bp | TTCTGCTGCCCTGGGAACTACAGAGAATGTACGTGTTaGGCCCGGATCCTTTATTGCCTGAGCCAGCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: FCCPGNYRECTC*ARILYCLSQRL Trigger: CAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGTAGTTCCCAGGGCAGCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS CAA 72 bp | GCCGAGGGCAAGCCACGGTCATGCAGGTGGTGGAATTaGAACACTCGTAGTCTGTTTCAGGAAGCTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: AEGKPRSCRWWN*NTRSLFQEAAS Trigger: GCTGGCAGCTTCCTGAAACAGACTACGAGTGTTCAAATTCCACCACCTGCATGACCGTGGCTTGCCCTCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206361.2 ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS CAA 72 bp | TCTCTGCTGCCCTGGGAACTACAGAGAATGTACGTGTaGGGCCCGGATCCTTTATTGCCTGAGCCAGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: SLLPWELQRMYV*GPDPLLPEPAA Trigger: AGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGTAGTTCCCAGGGCAGCAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206837.2 |
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| CDS CAA 72 bp | CTACAGAGAATGTACGTGTTGGGCCCGGATCCTTTATaGCCTGAGCCAGCGGCTGCGAATGCTCATCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: LQRMYVLGPDPL*PEPAAANAHLP Trigger: CGGGAGATGAGCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206628.2 ENSMUST00000206837.2 |
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| CDS CAA 90 bp | ACAGCTGATTCTCTGCTGCCCTGGGAACTACAGAGAATGTACGTGTaGGGCCCGGATCCTTTATTGCCTGAGCCAGCGGCTGCGAATGCT | + |
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Preference number: 6 (lower is better) Translates to: TADSLLPWELQRMYV*GPDPLLPEPAAANA Trigger: AGCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGTAGTTCCCAGGGCAGCAGAGAATCAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206837.2 |
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| CDS CAA 90 bp | CCCTGGGAACTACAGAGAATGTACGTGTTGGGCCCGGATCCTTTATaGCCTGAGCCAGCGGCTGCGAATGCTCATCTCCCGACAGAATGT | + |
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Preference number: 6 (lower is better) Translates to: PWELQRMYVLGPDPL*PEPAAANAHLPTEC Trigger: ACATTCTGTCGGGAGATGAGCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGTAGTTCCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206628.2 ENSMUST00000206837.2 |
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| CDS TCA 72 bp | CCGAGGGCAAGCCACGGTCATGCAGGTGGTGGAATTTaGACACTCGTAGTCTGTTTCAGGAAGCTGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PRASHGHAGGGI*TLVVCFRKLPA Trigger: TGCTGGCAGCTTCCTGAAACAGACTACGAGTGTTCAAATTCCACCACCTGCATGACCGTGGCTTGCCCTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206361.2 ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS GCA 72 bp | TACAGAGAATGTACGTGTTGGGCCCGGATCCTTTATTaGCTGAGCCAGCGGCTGCGAATGCTCATCTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: YRECTCWARILY*LSQRLRMLISR Trigger: TCGGGAGATGAGCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206628.2 ENSMUST00000206837.2 |
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| CDS CCA 72 bp | AGCGCTGCCGAGGGCAAGCCACGGTCATGCAGGTGGTaGAATTTGAACACTCGTAGTCTGTTTCAGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SAAEGKPRSCRW*NLNTRSLFQEA Trigger: AGCTTCCTGAAACAGACTACGAGTGTTCAAATTCCACCACCTGCATGACCGTGGCTTGCCCTCGGCAGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206361.2 ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS CAA 72 bp | TTTCTGCTGCCCTGGGAACTACAGAGAATGTACGTGTaGGGCCCGGATCCTTTATTGCCTGAGCCAGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: FLLPWELQRMYV*GPDPLLPEPAA Trigger: AGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGTAGTTCCCAGGGCAGCAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS CAA 90 bp | AATAGCGCTGCCGAGGGCAAGCCACGGTCATGCAGGTGGTGGAATTaGAACACTCGTAGTCTGTTTCAGGAAGCTGCCAGCAAAACCTGC | + |
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Preference number: 6 (lower is better) Translates to: NSAAEGKPRSCRWWN*NTRSLFQEAASKTC Trigger: GCAGGTTTTGCTGGCAGCTTCCTGAAACAGACTACGAGTGTTCAAATTCCACCACCTGCATGACCGTGGCTTGCCCTCGGCAGCGCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206361.2 ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS GCA 72 bp | TGGCGAAATAGCGCTGCCGAGGGCAAGCCACGGTCATaGAGGTGGTGGAATTTGAACACTCGTAGTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: WRNSAAEGKPRS*RWWNLNTRSLF Trigger: AAACAGACTACGAGTGTTCAAATTCCACCACCTGCATGACCGTGGCTTGCCCTCGGCAGCGCTATTTCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206361.2 ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS CAA 90 bp | TTTCAGTACTTTCTGCTGCCCTGGGAACTACAGAGAATGTACGTGTaGGGCCCGGATCCTTTATTGCCTGAGCCAGCGGCTGCGAATGCT | + |
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Preference number: 6 (lower is better) Translates to: FQYFLLPWELQRMYV*GPDPLLPEPAAANA Trigger: AGCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGTAGTTCCCAGGGCAGCAGAAAGTACTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS CCA 72 bp | AATAGCGCTGCCGAGGGCAAGCCACGGTCATGCAGGTaGTGGAATTTGAACACTCGTAGTCTGTTTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: NSAAEGKPRSCR*WNLNTRSLFQE Trigger: TTCCTGAAACAGACTACGAGTGTTCAAATTCCACCACCTGCATGACCGTGGCTTGCCCTCGGCAGCGCTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206361.2 ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS CAA 90 bp | CCCTGGGAACTACAGAGAATGTACGTGTTGGGCCCGGATCCTTTATaGCCTGAGCCAGCGGCTGCGAATGCTCTAAATTTAAGGATCCAT | + |
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Preference number: 6 (lower is better) Translates to: PWELQRMYVLGPDPL*PEPAAANALNLRIH Trigger: ATGGATCCTTAAATTTAGAGCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGTAGTTCCCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206517.2 |
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| CDS GCA 72 bp | ACTTTCTGTGAGGTGAGAGAACAGCTGATTCTCTGCTaGCCTGGGAACTACAGAGAATGTACGTGTTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: TFCEVREQLILC*PGNYRECTCWA Trigger: GGCCCAACACGTACATTCTCTGTAGTTCCCAGGGCAGCAGAGAATCAGCTGTTCTCTCACCTCACAGAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206837.2 |
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| CDS TCA 72 bp | ATGTTGATGACGAAGTTCCTCTGGGGTTTGAGGTCTTaGTCGACACAGGTAACAGAGGGCTTCACTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: MLMTKFLWGLRS*STQVTEGFTVQ Trigger: CTGCACAGTGAAGCCCTCTGTTACCTGTGTCGATCAAGACCTCAAACCCCAGAGGAACTTCGTCATCAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206361.2 ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS TCA 72 bp | GAGAATGTACGTGTTGGGCCCGGATCCTTTATTGCCTaGGCCAGCGGCTGCGAATGCTCTAAATTTAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: ENVRVGPGSFIA*ASGCECSKFKD Trigger: ATCCTTAAATTTAGAGCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206517.2 |
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| CDS TCA 72 bp | ATGTTGATGACGAAGTTCCTCTGGGGTTTGAGGTCTTaGTCCATCTCCCGACAGAATGTAGCACTGGGACAG | + |
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Preference number: 6 (lower is better) Translates to: MLMTKFLWGLRS*SISRQNVALGQ Trigger: CTGTCCCAGTGCTACATTCTGTCGGGAGATGGATCAAGACCTCAAACCCCAGAGGAACTTCGTCATCAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206934.2 |
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| CDS CCA 72 bp | TCATGTAAGGAGGGATTTCAGTACTTTCTGCTGCCCTaGGAACTACAGAGAATGTACGTGTTGGGCCCGGAT | + |
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Preference number: 6 (lower is better) Translates to: SCKEGFQYFLLP*ELQRMYVLGPD Trigger: ATCCGGGCCCAACACGTACATTCTCTGTAGTTCCCAGGGCAGCAGAAAGTACTGAAATCCCTCCTTACATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS CAA 72 bp | CATGTTGATGACGAAGTTCCTCTGGGGTTTGAGGTCTaGATCGACACAGGTAACAGAGGGCTTCACTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: HVDDEVPLGFEV*IDTGNRGLHCA Trigger: TGCACAGTGAAGCCCTCTGTTACCTGTGTCGATCAAGACCTCAAACCCCAGAGGAACTTCGTCATCAACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000032726.14 ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206361.2 ENSMUST00000206517.2 ENSMUST00000206628.2 |
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| CDS CAA 72 bp | CTACAGAGAATGTACGTGTTGGGCCCGGATCCTTTATaGCCTGAGCCAGCGGCTGCGAATGCTCTAAATTTA | + |
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Preference number: 6 (lower is better) Translates to: LQRMYVLGPDPL*PEPAAANALNL Trigger: TAAATTTAGAGCATTCGCAGCCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206517.2 |
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| CDS CAA 72 bp | CATGTTGATGACGAAGTTCCTCTGGGGTTTGAGGTCTaGATCCATCTCCCGACAGAATGTAGCACTGGGACA | + |
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Preference number: 6 (lower is better) Translates to: HVDDEVPLGFEV*IHLPTECSTGT Trigger: TGTCCCAGTGCTACATTCTGTCGGGAGATGGATCAAGACCTCAAACCCCAGAGGAACTTCGTCATCAACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206934.2 |
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| CDS GCA 72 bp | AGTACTTTCTGTGAGGTGAGAGAACAGCTGATTCTCTaGTGCCCTGGGAACTACAGAGAATGTACGTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: STFCEVREQLIL*CPGNYRECTCW Trigger: CCAACACGTACATTCTCTGTAGTTCCCAGGGCAGCAGAGAATCAGCTGTTCTCTCACCTCACAGAAAGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065574.9 ENSMUST00000107495.5 ENSMUST00000129166.3 ENSMUST00000206837.2 |
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