Pregenerated sensors for TM2D2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031556Ensembl transcript IDs: ENSMUST00000033961.7, ENSMUST00000210536.2, ENSMUST00000210758.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAGTCCTCCAAGTGTTAGCAGCTTCCCAACTGCTGTTCCAGTGTaGCCCAGGCAGAAGCGGTCGACTCCGAAGCATCCCAGGAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: PSPPSVSSFPTAVPV*PRQKRSTPKHPRKK Trigger: CTTCTTCCTGGGATGCTTCGGAGTCGACCGCTTCTGCCTGGGCCACACTGGAACAGCAGTTGGGAAGCTGCTAACACTTGGAGGACTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210536.2 ENSMUST00000210758.2 |
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| 3UTR GCA 90 bp | CCTGGGGCTGGCACACTCAATTCCCTCCAGGGCTCTGCACTGGACTaGAGTGTGTTGCACATCACTGTACGCCTGACCCCCAAATTTAAG | + |
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Preference number: 1 (lower is better) Translates to: PGAGTLNSLQGSALD*SVLHITVRLTPKFK Trigger: CTTAAATTTGGGGGTCAGGCGTACAGTGATGTGCAACACACTGCAGTCCAGTGCAGAGCCCTGGAGGGAATTGAGTGTGCCAGCCCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| 3UTR TCA 90 bp | ACACTCACTTGGTTTATCCTGGTGGGTCCCCCTGCCTCCAACGGCTaGAGAGCCAGCCACACAGAAACGTCACTGACGATGATCTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: TLTWFILVGPPASNG*RASHTETSLTMISG Trigger: TCCAGAGATCATCGTCAGTGACGTTTCTGTGTGGCTGGCTCTTCAGCCGTTGGAGGCAGGGGGACCCACCAGGATAAACCAAGTGAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR GCA 90 bp | TGTGAGTGGATAAACACTCACTTGGTTTATCCTGGTGGGTCCCCCTaGCTCCAACGGCTGAAGAGCCAGCCACACAGAAACGTCACTGAC | + |
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Preference number: 1 (lower is better) Translates to: CEWINTHLVYPGGSP*LQRLKSQPHRNVTD Trigger: GTCAGTGACGTTTCTGTGTGGCTGGCTCTTCAGCCGTTGGAGGCAGGGGGACCCACCAGGATAAACCAAGTGAGTGTTTATCCACTCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR CCA 90 bp | TGTACTTTATACAAGGCTTATTTTCTCGTAGGAAGGTCCTGGGGCTaGCACACTCAATTCCCTCCAGGGCTCTGCACTGGACTGCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: CTLYKAYFLVGRSWG*HTQFPPGLCTGLQC Trigger: ACACTGCAGTCCAGTGCAGAGCCCTGGAGGGAATTGAGTGTGCCAGCCCCAGGACCTTCCTACGAGAAAATAAGCCTTGTATAAAGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| 3UTR TCA 90 bp | AGGGCTCTGCACTGGACTGCAGTGTGTTGCACATCACTGTACGCCTaGCCCCCAAATTTAAGGCTATACTACTGGCTTCTCTGGAATGTT | + |
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Preference number: 1 (lower is better) Translates to: RALHWTAVCCTSLYA*PPNLRLYYWLLWNV Trigger: AACATTCCAGAGAAGCCAGTAGTATAGCCTTAAATTTGGGGGTCAGGCGTACAGTGATGTGCAACACACTGCAGTCCAGTGCAGAGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| 3UTR TCA 90 bp | GTCACTGACGATGATCTCTGGAGAGAAGTCACCAGCTTTGCTCTTTaGGATTGTGTATGTGAGGAAGGGTACGACGGGACTCCACAATAC | + |
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Preference number: 1 (lower is better) Translates to: VTDDDLWREVTSFAL*DCVCEEGYDGTPQY Trigger: GTATTGTGGAGTCCCGTCGTACCCTTCCTCACATACACAATCTCAAAGAGCAAAGCTGGTGACTTCTCTCCAGAGATCATCGTCAGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR CCA 90 bp | ACATCGCCTGAAGACTTCTCATTGGTGCAGCTTCTGACCTGTGCATaGAAATGTAGGGTCACGAAAGGCTGTGAGTGGATAAACACTCAC | + |
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Preference number: 1 (lower is better) Translates to: TSPEDFSLVQLLTCA*KCRVTKGCEWINTH Trigger: GTGAGTGTTTATCCACTCACAGCCTTTCGTGACCCTACATTTCCATGCACAGGTCAGAAGCTGCACCAATGAGAAGTCTTCAGGCGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR TCA 90 bp | TCTCTGGAGAGAAGTCACCAGCTTTGCTCTTTGAGATTGTGTATGTaGGGAAGGGTACGACGGGACTCCACAATACTGCTTGTCACTCTA | + |
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Preference number: 1 (lower is better) Translates to: SLERSHQLCSLRLCM*GRVRRDSTILLVTL Trigger: TAGAGTGACAAGCAGTATTGTGGAGTCCCGTCGTACCCTTCCTCACATACACAATCTCAAAGAGCAAAGCTGGTGACTTCTCTCCAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGTAGTAATTATCTTGGCAGGCAAGCACTGGCTTTCCTTGCTGGCGCAGGACCCTGGTGGGTCCCCCTaGCTCCAACGGCTGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LVVIILAGKHWLSLLAQDPGGSP*LQRLKS Trigger: GCTCTTCAGCCGTTGGAGGCAGGGGGACCCACCAGG...GTCCTGCGCCAGCAAGGAAAGCCAGTGCTTGCCTGCCAAGATAATTACTACAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTTCCCAACTGCTGTTCCAGTGTGGCCCAGGCAGAAGCGGTCGACTCCGATCCAAGAGAAGATGGTaGTGCTCAGAGGAGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: AASQLLFQCGPGRSGRLRSKRRW*CSEESS Trigger: TGAACTCTCCTCTGAGCATCACCATCTTCTCTTGGA...TCGGAGTCGACCGCTTCTGCCTGGGCCACACTGGAACAGCAGTTGGGAAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210536.2 ENSMUST00000210758.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTTAGCAGCTTCCCAACTGCTGTTCCAGTGTGGCCCAGGCAGAAGCGGTCGAGGCTCTGCACTGGACTaGAGTGTGTTGCACATCACT | + |
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Preference number: 2 (lower is better) Translates to: VLAASQLLFQCGPGRSGRGSALD*SVLHIT Trigger: AGTGATGTGCAACACACTGCAGTCCAGTGCAGAGCC...TCGACCGCTTCTGCCTGGGCCACACTGGAACAGCAGTTGGGAAGCTGCTAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGTCGGTCCTTCCTCCAAGAGAAGATGGTGATGCTCAGAGGAGAGTTCAGCCTGCCTCCAACGGCTaGAGAGCCAGCCACACAGAA | + |
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Preference number: 2 (lower is better) Translates to: TWSVLPPREDGDAQRRVQPASNG*RASHTE Trigger: TTCTGTGTGGCTGGCTCTTCAGCCGTTGGAGGCAGG...CTGAACTCTCCTCTGAGCATCACCATCTTCTCTTGGAGGAAGGACCGACCAAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR-3UTR CCA 90 bp | ACGAACCACCAGATCCCCAGTCCTCCAAGTGTTAGCAGCTTCCCAACTGCTGTTTTGGCAGGCAAGCACTaGCTTTCCTTGCTGGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: TNHQIPSPPSVSSFPTAVLAGKH*LSLLAQ Trigger: CTGCGCCAGCAAGGAAAGCCAGTGCTTGCCTGCCAA...AACAGCAGTTGGGAAGCTGCTAACACTTGGAGGACTGGGGATCTGGTGGTTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210536.2 ENSMUST00000210758.2 |
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| 3UTR-3UTR CCA 90 bp | AACCACCAGATCCCCAGTCCTCCAAGTGTTAGCAGCTTCCCAACTGCTGTTCCATTGGCAGGCAAGCACTaGCTTTCCTTGCTGGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: NHQIPSPPSVSSFPTAVPLAGKH*LSLLAQ Trigger: CTGCGCCAGCAAGGAAAGCCAGTGCTTGCCTGCCAA...TGGAACAGCAGTTGGGAAGCTGCTAACACTTGGAGGACTGGGGATCTGGTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210536.2 ENSMUST00000210758.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTCGGTCCTTCCTCCAAGAGAAGATGGTGATGCTCAGAGGAGAGTTCAGAGCTTCCCTCCAGGGCTCTaGACTGGACTGCAGTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: WSVLPPREDGDAQRRVQSFPPGL*TGLQCV Trigger: AACACACTGCAGTCCAGTGCAGAGCCCTGGAGGGAA...GCTCTGAACTCTCCTCTGAGCATCACCATCTTCTCTTGGAGGAAGGACCGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| 3UTR CAA 90 bp | GGCACACTCAATTCCCTCCAGGGCTCTGCACTGGACTGCAGTGTGTaGCACATCACTGTACGCCTGACCCCCAAATTTAAGGCTATACTA | + |
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Preference number: 2 (lower is better) Translates to: GTLNSLQGSALDCSV*HITVRLTPKFKAIL Trigger: TAGTATAGCCTTAAATTTGGGGGTCAGGCGTACAGTGATGTGCAACACACTGCAGTCCAGTGCAGAGCCCTGGAGGGAATTGAGTGTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTCGGTCCTTCCTCCAAGAGAAGATGGTGATGCTCAGAGGAGAGTTCAGAGCTTGAGATTGTGTATGTaGGGAAGGGTACGACGGGAC | + |
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Preference number: 2 (lower is better) Translates to: WSVLPPREDGDAQRRVQSLRLCM*GRVRRD Trigger: GTCCCGTCGTACCCTTCCTCACATACACAATCTCAA...GCTCTGAACTCTCCTCTGAGCATCACCATCTTCTCTTGGAGGAAGGACCGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGAGTTCAGAGCTTGTAGTAATTATCTTGGCAGGCAAGCACTGGCTTTCCTTGGCAGGCAAGCACTaGCTTTCCTTGCTGGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: EESSELVVIILAGKHWLSLAGKH*LSLLAQ Trigger: CTGCGCCAGCAAGGAAAGCCAGTGCTTGCCTGCCAA...GGAAAGCCAGTGCTTGCCTGCCAAGATAATTACTACAAGCTCTGAACTCTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033961.7 ENSMUST00000210536.2 ENSMUST00000210758.2 |
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| 3UTR-3UTR CCA 90 bp | AACACTCACTTGGTTTATCCTGGTGGGTCCCCCTGCCTCCAACGGCTGAAGAGCACTGACGATGATCTCTaGAGAGAAGTCACCAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: NTHLVYPGGSPCLQRLKSTDDDL*REVTSF Trigger: AAAGCTGGTGACTTCTCTCCAGAGATCATCGTCAGT...GCTCTTCAGCCGTTGGAGGCAGGGGGACCCACCAGGATAAACCAAGTGAGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGTCGGTCCTTCCTCCAAGAGAAGATGGTGATGCTCAGAGGAGAGTTCAGTCCAAGAGAAGATGGTaGTGCTCAGAGGAGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: TWSVLPPREDGDAQRRVQSKRRW*CSEESS Trigger: TGAACTCTCCTCTGAGCATCACCATCTTCTCTTGGA...CTGAACTCTCCTCTGAGCATCACCATCTTCTCTTGGAGGAAGGACCGACCAAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR-3UTR TCA 90 bp | GAAACGTCACTGACGATGATCTCTGGAGAGAAGTCACCAGCTTTGCTCTTTGAGTCCAAGAGAAGATGGTaGTGCTCAGAGGAGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: ETSLTMISGEKSPALLFESKRRW*CSEESS Trigger: TGAACTCTCCTCTGAGCATCACCATCTTCTCTTGGA...CTCAAAGAGCAAAGCTGGTGACTTCTCTCCAGAGATCATCGTCAGTGACGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR CAA 90 bp | GTATTAGAATCCACAGTCATTTCTACATCGCCTGAAGACTTCTCATaGGTGCAGCTTCTGACCTGTGCATGGAAATGTAGGGTCACGAAA | + |
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Preference number: 2 (lower is better) Translates to: VLESTVISTSPEDFS*VQLLTCAWKCRVTK Trigger: TTTCGTGACCCTACATTTCCATGCACAGGTCAGAAGCTGCACCAATGAGAAGTCTTCAGGCGATGTAGAAATGACTGTGGATTCTAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR-3UTR GCA 90 bp | GTGATGCTCAGAGGAGAGTTCAGAGCTTGTAGTAATTATCTTGGCAGGCAAGCAAGAAGTCACCAGCTTTaGTCTTTGAGATTGTGTATG | + |
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Preference number: 2 (lower is better) Translates to: VMLRGEFRACSNYLGRQARSHQL*SLRLCM Trigger: CATACACAATCTCAAAGAGCAAAGCTGGTGACTTCT...TGCTTGCCTGCCAAGATAATTACTACAAGCTCTGAACTCTCCTCTGAGCATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCAGTGTACTTTATACAAGGCTTATTTTCTCGTAGGAAGGTCCTGGGGCTGTACTACTGGCTTCTCTaGAATGTTTTATCCTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: CPVYFIQGLFSRRKVLGLYYWLL*NVLSSN Trigger: ATTTGAGGATAAAACATTCCAGAGAAGCCAGTAGTA...CAGCCCCAGGACCTTCCTACGAGAAAATAAGCCTTGTATAAAGTACACTGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| 3UTR GCA 72 bp | GGCACACTCAATTCCCTCCAGGGCTCTGCACTGGACTaGAGTGTGTTGCACATCACTGTACGCCTGACCCCC | + |
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Preference number: 3 (lower is better) Translates to: GTLNSLQGSALD*SVLHITVRLTP Trigger: GGGGGTCAGGCGTACAGTGATGTGCAACACACTGCAGTCCAGTGCAGAGCCCTGGAGGGAATTGAGTGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| 3UTR GCA 72 bp | TCCTGGGGCTGGCACACTCAATTCCCTCCAGGGCTCTaGACTGGACTGCAGTGTGTTGCACATCACTGTACG | + |
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Preference number: 3 (lower is better) Translates to: SWGWHTQFPPGL*TGLQCVAHHCT Trigger: CGTACAGTGATGTGCAACACACTGCAGTCCAGTGCAGAGCCCTGGAGGGAATTGAGTGTGCCAGCCCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCTTGCTGGCGCAGGACAGCAGCAGGGCTTAGTAGACAGTGCACCAGTTGCTTTTGGGGTGAAAAACTaGGTCGGTCCTTCCTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: FLAGAGQQQGLVDSAPVAFGVKN*VGPSSK Trigger: CTTGGAGGAAGGACCGACCAAGTTTTTCACCCCAAA...AGCAACTGGTGCACTGTCTACTAAGCCCTGCTGCTGTCCTGCGCCAGCAAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| 3UTR GCA 72 bp | ATAAACACTCACTTGGTTTATCCTGGTGGGTCCCCCTaGCTCCAACGGCTGAAGAGCCAGCCACACAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: INTHLVYPGGSP*LQRLKSQPHRN Trigger: GTTTCTGTGTGGCTGGCTCTTCAGCCGTTGGAGGCAGGGGGACCCACCAGGATAAACCAAGTGAGTGTTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR CCA 72 bp | TCAGAGCTTGTAGTAATTATCTTGGCAGGCAAGCACTaGCTTTCCTTGCTGGCGCAGGACAGCAGCAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: SELVVIILAGKH*LSLLAQDSSRA Trigger: AGCCCTGCTGCTGTCCTGCGCCAGCAAGGAAAGCCAGTGCTTGCCTGCCAAGATAATTACTACAAGCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210536.2 ENSMUST00000210758.2 |
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| 3UTR-3UTR CAA 90 bp | GCTTTCCTTGCTGGCGCAGGACAGCAGCAGGGCTTAGTAGACAGTGCACCAGTTCTTGTAGTAATTATCTaGGCAGGCAAGCACTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: AFLAGAGQQQGLVDSAPVLVVII*AGKHWL Trigger: AAGCCAGTGCTTGCCTGCCAAGATAATTACTACAAG...AACTGGTGCACTGTCTACTAAGCCCTGCTGCTGTCCTGCGCCAGCAAGGAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210536.2 ENSMUST00000210758.2 |
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| 3UTR TCA 72 bp | GATGATCTCTGGAGAGAAGTCACCAGCTTTGCTCTTTaGGATTGTGTATGTGAGGAAGGGTACGACGGGACT | + |
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Preference number: 3 (lower is better) Translates to: DDLWREVTSFAL*DCVCEEGYDGT Trigger: AGTCCCGTCGTACCCTTCCTCACATACACAATCTCAAAGAGCAAAGCTGGTGACTTCTCTCCAGAGATCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR CCA 72 bp | GAAGACTTCTCATTGGTGCAGCTTCTGACCTGTGCATaGAAATGTAGGGTCACGAAAGGCTGTGAGTGGATA | + |
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Preference number: 3 (lower is better) Translates to: EDFSLVQLLTCA*KCRVTKGCEWI Trigger: TATCCACTCACAGCCTTTCGTGACCCTACATTTCCATGCACAGGTCAGAAGCTGCACCAATGAGAAGTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR-3UTR CAA 90 bp | CTTGTAGTAATTATCTTGGCAGGCAAGCACTGGCTTTCCTTGCTGGCGCAGGACGAGAAGTCACCAGCTTaGCTCTTTGAGATTGTGTAT | + |
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Preference number: 3 (lower is better) Translates to: LVVIILAGKHWLSLLAQDEKSPA*LFEIVY Trigger: ATACACAATCTCAAAGAGCAAAGCTGGTGACTTCTC...GTCCTGCGCCAGCAAGGAAAGCCAGTGCTTGCCTGCCAAGATAATTACTACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR-3UTR CAA 90 bp | AGAATAAGATCAACGAACCACCAGATCCCCAGTCCTCCAAGTGTTAGCAGCTTCCTTGTAGTAATTATCTaGGCAGGCAAGCACTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: RIRSTNHQIPSPPSVSSFLVVII*AGKHWL Trigger: AAGCCAGTGCTTGCCTGCCAAGATAATTACTACAAG...GAAGCTGCTAACACTTGGAGGACTGGGGATCTGGTGGTTCGTTGATCTTATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210536.2 ENSMUST00000210758.2 |
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| 3UTR TCA 72 bp | AGAAGTCACCAGCTTTGCTCTTTGAGATTGTGTATGTaGGGAAGGGTACGACGGGACTCCACAATACTGCTT | + |
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Preference number: 3 (lower is better) Translates to: RSHQLCSLRLCM*GRVRRDSTILL Trigger: AAGCAGTATTGTGGAGTCCCGTCGTACCCTTCCTCACATACACAATCTCAAAGAGCAAAGCTGGTGACTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR-3UTR CAA 90 bp | ACGTCACTGACGATGATCTCTGGAGAGAAGTCACCAGCTTTGCTCTTTGAGATTCTTGTAGTAATTATCTaGGCAGGCAAGCACTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: TSLTMISGEKSPALLFEILVVII*AGKHWL Trigger: AAGCCAGTGCTTGCCTGCCAAGATAATTACTACAAG...AATCTCAAAGAGCAAAGCTGGTGACTTCTCTCCAGAGATCATCGTCAGTGACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR TCA 72 bp | GTGTGTATTAGAATCCACAGTCATTTCTACATCGCCTaGAGACTTCTCATTGGTGCAGCTTCTGACCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: VCIRIHSHFYIA*RLLIGAASDLC Trigger: GCACAGGTCAGAAGCTGCACCAATGAGAAGTCTTCAGGCGATGTAGAAATGACTGTGGATTCTAATACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| 3UTR TCA 72 bp | AGCATCCCAGGAAGAAGGAGTAGAGAAGCGTGGTTATaGAGTAGTGTCCAGTGTACTTTATACAAGGCTTAT | + |
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Preference number: 3 (lower is better) Translates to: SIPGRRSREAWL*SSVQCTLYKAY Trigger: ATAAGCCTTGTATAAAGTACACTGGACACTACTTCATAACCACGCTTCTCTACTCCTTCTTCCTGGGATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| CDS-3UTR GCA 90 bp | CCCAACTGCTGTTCCAGTGTGGCCCAGGCAGAAGCGGTCGACTCCGAAGCATCCCTCCGAGAAACACAGTaGAGCAGCAGCAGGTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: PNCCSSVAQAEAVDSEASLRETQ*SSSRFP Trigger: GGGGAACCTGCTGCTGCTGCACTGTGTTTCTCGGAG...GGATGCTTCGGAGTCGACCGCTTCTGCCTGGGCCACACTGGAACAGCAGTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210536.2 ENSMUST00000210758.2 |
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| CDS-3UTR GCA 90 bp | GTTCCAGTGTGGCCCAGGCAGAAGCGGTCGACTCCGAAGCATCCCAGGAAGAAGCTCCGAGAAACACAGTaGAGCAGCAGCAGGTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: VPVWPRQKRSTPKHPRKKLRETQ*SSSRFP Trigger: GGGGAACCTGCTGCTGCTGCACTGTGTTTCTCGGAG...CTTCTTCCTGGGATGCTTCGGAGTCGACCGCTTCTGCCTGGGCCACACTGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210536.2 ENSMUST00000210758.2 |
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| CDS-3UTR TCA 90 bp | GCTTTCCTTGCTGGCGCAGGACAGCAGCAGGGCTTAGTAGACAGTGCACCAGTTGTTGCATTTCCAACGTaGTCCACTGGGGCATCACAG | + |
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Preference number: 4 (lower is better) Translates to: AFLAGAGQQQGLVDSAPVVAFPT*STGASQ Trigger: CTGTGATGCCCCAGTGGATCACGTTGGAAATGCAAC...AACTGGTGCACTGTCTACTAAGCCCTGCTGCTGTCCTGCGCCAGCAAGGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| CDS-3UTR GCA 90 bp | TTCCTTGCTGGCGCAGGACAGCAGCAGGGCTTAGTAGACAGTGCACCAGTTGCTCTCCTGGGAGGCAGTTaGATTTCCAACGTGATCCAC | + |
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Preference number: 4 (lower is better) Translates to: FLAGAGQQQGLVDSAPVALLGGS*ISNVIH Trigger: GTGGATCACGTTGGAAATGCAACTGCCTCCCAGGAG...AGCAACTGGTGCACTGTCTACTAAGCCCTGCTGCTGTCCTGCGCCAGCAAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| CDS-3UTR GCA 90 bp | AGAAGCGGTCGACTCCGAAGCATCCCAGGAAGAAGGAGTAGAGAAGCGTGGTTATTCCCTCCAGGGCTCTaGACTGGACTGCAGTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: RSGRLRSIPGRRSREAWLFPPGL*TGLQCV Trigger: AACACACTGCAGTCCAGTGCAGAGCCCTGGAGGGAA...TAACCACGCTTCTCTACTCCTTCTTCCTGGGATGCTTCGGAGTCGACCGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210536.2 |
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| CDS-3UTR GCA 90 bp | ATTATCTTGGCAGGCAAGCACTGGCTTTCCTTGCTGGCGCAGGACAGCAGCAGGATACAGGTTGGTCTTTaGACTTGGGTGGCTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: IILAGKHWLSLLAQDSSRIQVGL*TWVAWA Trigger: TGCCCAAGCCACCCAAGTGCAAAGACCAACCTGTAT...CCTGCTGCTGTCCTGCGCCAGCAAGGAAAGCCAGTGCTTGCCTGCCAAGATAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| CDS-3UTR CCA 90 bp | GGTCGGTCCTTCCTCCAAGAGAAGATGGTGATGCTCAGAGGAGAGTTCAGAGCTGTTGGTCTTTGCACTTaGGTGGCTTGGGCACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRSFLQEKMVMLRGEFRAVGLCT*VAWAQA Trigger: TGCCTGTGCCCAAGCCACCCAAGTGCAAAGACCAAC...AGCTCTGAACTCTCCTCTGAGCATCACCATCTTCTCTTGGAGGAAGGACCGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| 3UTR CAA 72 bp | AATTCCCTCCAGGGCTCTGCACTGGACTGCAGTGTGTaGCACATCACTGTACGCCTGACCCCCAAATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSLQGSALDCSV*HITVRLTPKFK Trigger: CTTAAATTTGGGGGTCAGGCGTACAGTGATGTGCAACACACTGCAGTCCAGTGCAGAGCCCTGGAGGGAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTTGTAGTAATTATCTTGGCAGGCAAGCACTGGCTTTCCTTGCTGGCGCACTCGTAGGAAGGTCCTaGGGCTGGCACACTCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: RACSNYLGRQALAFLAGALVGRS*GWHTQF Trigger: GAATTGAGTGTGCCAGCCCCAGGACCTTCCTACGAG...TGCGCCAGCAAGGAAAGCCAGTGCTTGCCTGCCAAGATAATTACTACAAGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210536.2 |
||
| CDS-3UTR GCA 90 bp | ACGTCACTGACGATGATCTCTGGAGAGAAGTCACCAGCTTTGCTCTTTGAGATTCTCCGAGAAACACAGTaGAGCAGCAGCAGGTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLTMISGEKSPALLFEILRETQ*SSSRFP Trigger: GGGGAACCTGCTGCTGCTGCACTGTGTTTCTCGGAG...AATCTCAAAGAGCAAAGCTGGTGACTTCTCTCCAGAGATCATCGTCAGTGACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCTTGTAGTAATTATCTTGGCAGGCAAGCACTGGCTTTCCTTGCTGGCGCACTCCTGGGAGGCAGTTaGATTTCCAACGTGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RACSNYLGRQALAFLAGALLGGS*ISNVIH Trigger: GTGGATCACGTTGGAAATGCAACTGCCTCCCAGGAG...TGCGCCAGCAAGGAAAGCCAGTGCTTGCCTGCCAAGATAATTACTACAAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
||
| CDS-3UTR GCA 90 bp | TCCGAAGCATCCCAGGAAGAAGGAGTAGAGAAGCGTGGTTATGAAGTAGTGTCCGGCTCTGCACTGGACTaGAGTGTGTTGCACATCACT | + |
|
Preference number: 4 (lower is better) Translates to: SEASQEEGVEKRGYEVVSGSALD*SVLHIT Trigger: AGTGATGTGCAACACACTGCAGTCCAGTGCAGAGCC...GGACACTACTTCATAACCACGCTTCTCTACTCCTTCTTCCTGGGATGCTTCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210536.2 |
||
| 3UTR CAA 72 bp | TGCTCAGAGGAGAGTTCAGAGCTTGTAGTAATTATCTaGGCAGGCAAGCACTGGCTTTCCTTGCTGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSEESSELVVII*AGKHWLSLLAQ Trigger: CTGCGCCAGCAAGGAAAGCCAGTGCTTGCCTGCCAAGATAATTACTACAAGCTCTGAACTCTCCTCTGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033961.7 ENSMUST00000210536.2 ENSMUST00000210758.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTGCTCTTTGAGATTGTGTATGTGAGGAAGGGTACGACGGGACTCCACAATGTTGCATTTCCAACGTaGTCCACTGGGGCATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLFEIVYVRKGTTGLHNVAFPT*STGASQ Trigger: CTGTGATGCCCCAGTGGATCACGTTGGAAATGCAAC...ATTGTGGAGTCCCGTCGTACCCTTCCTCACATACACAATCTCAAAGAGCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
||
| CDS-3UTR GCA 90 bp | GAAACGTCACTGACGATGATCTCTGGAGAGAAGTCACCAGCTTTGCTCTTTGAGGGCTCTGCACTGGACTaGAGTGTGTTGCACATCACT | + |
|
Preference number: 4 (lower is better) Translates to: ETSLTMISGEKSPALLFEGSALD*SVLHIT Trigger: AGTGATGTGCAACACACTGCAGTCCAGTGCAGAGCC...CTCAAAGAGCAAAGCTGGTGACTTCTCTCCAGAGATCATCGTCAGTGACGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033961.7 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGAGCTTGTAGTAATTATCTTGGCAGGCAAGCACTGGCTTTCCTTGCTGTTCCCTCCAGGGCTCTaGACTGGACTGCAGTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSELVVIILAGKHWLSLLFPPGL*TGLQCV Trigger: AACACACTGCAGTCCAGTGCAGAGCCCTGGAGGGAA...CAGCAAGGAAAGCCAGTGCTTGCCTGCCAAGATAATTACTACAAGCTCTGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210536.2 |
||
| CDS-3UTR GCA 90 bp | ACCACCAGATCCCCAGTCCTCCAAGTGTTAGCAGCTTCCCAACTGCTGTTCCAGTGGCTTTGCTGTTGTTaGTGCTGCTCTGTTAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TTRSPVLQVLAASQLLFQWLCCC*CCSVKK Trigger: TTTCTTAACAGAGCAGCAGCAACAACAGCAAAGCCA...CTGGAACAGCAGTTGGGAAGCTGCTAACACTTGGAGGACTGGGGATCTGGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS-3UTR CCA 90 bp | TCCGAAGCATCCCAGGAAGAAGGAGTAGAGAAGCGTGGTTATGAAGTAGTGTCCGGGCACAGGCATGGTTaGTTCCTGAGGAAAGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SEASQEEGVEKRGYEVVSGHRHG*FLRKAN Trigger: ATTTGCTTTCCTCAGGAACCAACCATGCCTGTGCCC...GGACACTACTTCATAACCACGCTTCTCTACTCCTTCTTCCTGGGATGCTTCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS-3UTR GCA 90 bp | AACCACCAGATCCCCAGTCCTCCAAGTGTTAGCAGCTTCCCAACTGCTGTTCCATGCTTCCCACGAAGGTaGCTGTACAAAGAACAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NHQIPSPPSVSSFPTAVPCFPRR*LYKEQN Trigger: ATTTTGTTCTTTGTACAGGCACCTTCGTGGGAAGCA...TGGAACAGCAGTTGGGAAGCTGCTAACACTTGGAGGACTGGGGATCTGGTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGCGGTCGACTCCGAAGCATCCCAGGAAGAAGGAGTAGAGAAGCGTGGTTATGCTGTTGTTGCTGCTaGTCTGTTAAGAAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSGRLRSIPGRRSREAWLCCCCC*SVKKSL Trigger: AAGGCTTTTCTTAACAGAGCAGCAGCAACAACAGCA...TAACCACGCTTCTCTACTCCTTCTTCCTGGGATGCTTCGGAGTCGACCGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS-3UTR CCA 90 bp | ATGATCTCTGGAGAGAAGTCACCAGCTTTGCTCTTTGAGATTGTGTATGTGAGGCTCGTAGGAAGGTCCTaGGGCTGGCACACTCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: MISGEKSPALLFEIVYVRLVGRS*GWHTQF Trigger: GAATTGAGTGTGCCAGCCCCAGGACCTTCCTACGAG...CCTCACATACACAATCTCAAAGAGCAAAGCTGGTGACTTCTCTCCAGAGATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033961.7 |
||
| CDS-3UTR CCA 90 bp | ATGATCTCTGGAGAGAAGTCACCAGCTTTGCTCTTTGAGATTGTGTATGTGAGGTGCACTTGGGTGGCTTaGGCACAGGCATGGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MISGEKSPALLFEIVYVRCTWVA*AQAWLV Trigger: AACCAACCATGCCTGTGCCCAAGCCACCCAAGTGCA...CCTCACATACACAATCTCAAAGAGCAAAGCTGGTGACTTCTCTCCAGAGATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS-3UTR TCA 90 bp | TCCGAAGCATCCCAGGAAGAAGGAGTAGAGAAGCGTGGTTATGAAGTAGTGTCCACAAAATCCTCACCTTaGGACAACCATAACCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEASQEEGVEKRGYEVVSTKSSP*DNHNQA Trigger: AGCTTGGTTATGGTTGTCTCAAGGTGAGGATTTTGT...GGACACTACTTCATAACCACGCTTCTCTACTCCTTCTTCCTGGGATGCTTCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS-3UTR TCA 90 bp | ACTCTAGTTTGCAAGCTTAAGATTTGGGGTGAAAAACTTGGTCGGTCCTTCCTCGGCATGGTTGGTTCCTaGGGAAAGCAAATGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLVCKLKIWGEKLGRSFLGMVGS*GKQMCS Trigger: AGAGCACATTTGCTTTCCTCAGGAACCAACCATGCC...GAGGAAGGACCGACCAAGTTTTTCACCCCAAATCTTAAGCTTGCAAACTAGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAGATGGTGATGCTCAGAGGAGAGTTCAGAGCTTGTAGTAATTATCTTGGCAGAAAAGCCTTGCTTTaGAAGTACAGTCGATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EKMVMLRGEFRACSNYLGRKALL*KYSRCL Trigger: AAGACATCGACTGTACTTTCAAAGCAAGGCTTTTCT...GCCAAGATAATTACTACAAGCTCTGAACTCTCCTCTGAGCATCACCATCTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS TCA 90 bp | AGAGCAAAGGATGACTGGCGAGTTGGGGTCGCTGTATTCCCAGCTTaGGGCCGCGGGACCCTCGAGGTGAGCGGCGCCCGAGGGTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RAKDDWRVGVAVFPA*GRGTLEVSGARGCE Trigger: CTCACACCCTCGGGCGCCGCTCACCTCGAGGGTCCCGCGGCCTCAAGCTGGGAATACAGCGACCCCAACTCGCCAGTCATCCTTTGCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033961.7 ENSMUST00000210536.2 ENSMUST00000210758.2 |
||
| CDS TCA 90 bp | TTGGGGTCGCTGTATTCCCAGCTTGAGGCCGCGGGACCCTCGAGGTaGGCGGCGCCCGAGGGTGTGAGATCCAGTTCGGCCGTAGCATTA | + |
|
Preference number: 5 (lower is better) Translates to: LGSLYSQLEAAGPSR*AAPEGVRSSSAVAL Trigger: TAATGCTACGGCCGAACTGGATCTCACACCCTCGGGCGCCGCTCACCTCGAGGGTCCCGCGGCCTCAAGCTGGGAATACAGCGACCCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033961.7 ENSMUST00000210536.2 ENSMUST00000210758.2 |
||
| CDS GCA 90 bp | TCCAGTTCGGCCGTAGCATTAAACGAGTGGCTCCGAGAAACACAGTaGAGCAGCAGCAGGTTCCCCAATAGCAGGGCCGCCTGGCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSSAVALNEWLRETQ*SSSRFPNSRAAWPH Trigger: GTGCGGCCAGGCGGCCCTGCTATTGGGGAACCTGCTGCTGCTGCACTGTGTTTCTCGGAGCCACTCGTTTAATGCTACGGCCGAACTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033961.7 ENSMUST00000210536.2 ENSMUST00000210758.2 |
||
| CDS-3UTR CAA 90 bp | TCACTTGGTTTATCCTGGTGGGTCCCCCTGCCTCCAACGGCTGAAGAGCCAGCCAGGATGACTGGCGAGTaGGGGTCGCTGTATTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLGLSWWVPLPPTAEEPARMTGE*GSLYSQ Trigger: CTGGGAATACAGCGACCCCAACTCGCCAGTCATCCT...GGCTGGCTCTTCAGCCGTTGGAGGCAGGGGGACCCACCAGGATAAACCAAGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGTGTGGCCCAGGCAGAAGCGGTCGACTCCGAAGCATCCCAGGAAGAAGAGGATGACTGGCGAGTaGGGGTCGCTGTATTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VPVWPRQKRSTPKHPRKKRMTGE*GSLYSQ Trigger: CTGGGAATACAGCGACCCCAACTCGCCAGTCATCCT...CTTCTTCCTGGGATGCTTCGGAGTCGACCGCTTCTGCCTGGGCCACACTGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210536.2 ENSMUST00000210758.2 |
||
| CDS TCA 90 bp | GGGCATCACAGTCTACGAACTCGTCGGGTAGGTAAGAGCAAAGGATaGCTGGCGAGTTGGGGTCGCTGTATTCCCAGCTTGAGGCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GHHSLRTRRVGKSKG*LASWGRCIPSLRPR Trigger: CCGCGGCCTCAAGCTGGGAATACAGCGACCCCAACTCGCCAGTCATCCTTTGCTCTTACCTACCCGACGAGTTCGTAGACTGTGATGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
||
| CDS GCA 90 bp | CCTGGGGCTGGCACACTCAATTCCCTCCAGGGCTCTGCACTGGACTaGAGTGTGTTGCACATCACTGTACGCCTGACCCCCAAACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGAGTLNSLQGSALD*SVLHITVRLTPKLE Trigger: CTCAAGTTTGGGGGTCAGGCGTACAGTGATGTGCAACACACTGCAGTCCAGTGCAGAGCCCTGGAGGGAATTGAGTGTGCCAGCCCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033961.7 |
||
| CDS CCA 90 bp | GCGCCCGAGGGTGTGAGATCCAGTTCGGCCGTAGCATTAAACGAGTaGCTCCGAGAAACACAGTGCAGCAGCAGCAGGTTCCCCAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: APEGVRSSSAVALNE*LRETQCSSSRFPNS Trigger: GCTATTGGGGAACCTGCTGCTGCTGCACTGTGTTTCTCGGAGCCACTCGTTTAATGCTACGGCCGAACTGGATCTCACACCCTCGGGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033961.7 ENSMUST00000210536.2 ENSMUST00000210758.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGCACACTCAATTCCCTCCAGGGCTCTGCACTGGACTGCAGTGTGTTGCACTTGCACTTGGGTGGCTaGGGCACAGGCATGGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AGTLNSLQGSALDCSVLHLHLGG*GTGMVG Trigger: ACCAACCATGCCTGTGCCCAAGCCACCCAAGTGCAA...GTGCAACACACTGCAGTCCAGTGCAGAGCCCTGGAGGGAATTGAGTGTGCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGGTCGGTCCTTCCTCCAAGAGAAGATGGTGATGCTCAGAGGAGAGTTCAGAGGATGACTGGCGAGTaGGGGTCGCTGTATTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TWSVLPPREDGDAQRRVQRMTGE*GSLYSQ Trigger: CTGGGAATACAGCGACCCCAACTCGCCAGTCATCCT...CTGAACTCTCCTCTGAGCATCACCATCTTCTCTTGGAGGAAGGACCGACCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
||
| CDS TCA 90 bp | GGACTGCAGTGTGTTGCACATCACTGTACGCCTGACCCCCAAACTTaGGACAACCATAACCAAGCTCCTGGGAGGCAGTTGCATTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GLQCVAHHCTPDPQT*DNHNQAPGRQLHFQ Trigger: TTGGAAATGCAACTGCCTCCCAGGAGCTTGGTTATGGTTGTCTCAAGTTTGGGGGTCAGGCGTACAGTGATGTGCAACACACTGCAGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033961.7 |
||
| CDS GCA 90 bp | ACCCCCAAACTTGAGACAACCATAACCAAGCTCCTGGGAGGCAGTTaGATTTCCAACGTGATCCACTGGGGCATCACAGTCTACGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: TPKLETTITKLLGGS*ISNVIHWGITVYEL Trigger: GAGTTCGTAGACTGTGATGCCCCAGTGGATCACGTTGGAAATGCAACTGCCTCCCAGGAGCTTGGTTATGGTTGTCTCAAGTTTGGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033961.7 |
||
| CDS-3UTR CAA 90 bp | GAGTTCAGAGCTTGTAGTAATTATCTTGGCAGGCAAGCACTGGCTTTCCTTGCTGGTTGGTCTTTGCACTaGGGTGGCTTGGGCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EFRACSNYLGRQALAFLAGWSLH*GGLGTG Trigger: GCCTGTGCCCAAGCCACCCAAGTGCAAAGACCAACC...AGCAAGGAAAGCCAGTGCTTGCCTGCCAAGATAATTACTACAAGCTCTGAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS GCA 90 bp | AATCCTCACCTTGAGACAACCATAACCAAGCTCCTGGGAGGCAGTTaGATTTCCAACGTGATCCACTGGGGCATCACAGTCTACGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: NPHLETTITKLLGGS*ISNVIHWGITVYEL Trigger: GAGTTCGTAGACTGTGATGCCCCAGTGGATCACGTTGGAAATGCAACTGCCTCCCAGGAGCTTGGTTATGGTTGTCTCAAGGTGAGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS TCA 90 bp | TGGTCTTTGCACTTGGGTGGCTTGGGCACAGGCATGGTTGGTTCCTaGGGAAAGCAAATGTGCTCTTCAGCCGTTAAAACCTTTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: WSLHLGGLGTGMVGS*GKQMCSSAVKTFVM Trigger: CATGACAAAGGTTTTAACGGCTGAAGAGCACATTTGCTTTCCTCAGGAACCAACCATGCCTGTGCCCAAGCCACCCAAGTGCAAAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS CCA 90 bp | GCAATACAGGTTGGTCTTTGCACTTGGGTGGCTTGGGCACAGGCATaGTTGGTTCCTGAGGAAAGCAAATGTGCTCTTCAGCCGTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AIQVGLCTWVAWAQA*LVPEESKCALQPLK Trigger: TTTTAACGGCTGAAGAGCACATTTGCTTTCCTCAGGAACCAACCATGCCTGTGCCCAAGCCACCCAAGTGCAAAGACCAACCTGTATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS CCA 90 bp | CAGTCAAAGGAAGCAATACAGGTTGGTCTTTGCACTTGGGTGGCTTaGGCACAGGCATGGTTGGTTCCTGAGGAAAGCAAATGTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QSKEAIQVGLCTWVA*AQAWLVPEESKCAL Trigger: AAGAGCACATTTGCTTTCCTCAGGAACCAACCATGCCTGTGCCCAAGCCACCCAAGTGCAAAGACCAACCTGTATTGCTTCCTTTGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAGAGTTCAGAGCTTGTAGTAATTATCTTGGCAGGCAAGCACTGGCTTTCCAATACAGGTTGGTCTTaGCACTTGGGTGGCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EESSELVVIILAGKHWLSNTGWS*HLGGLG Trigger: GCCCAAGCCACCCAAGTGCAAAGACCAACCTGTATT...GGAAAGCCAGTGCTTGCCTGCCAAGATAATTACTACAAGCTCTGAACTCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS CCA 90 bp | TTCAACAGTCAAAGGAAGCAATACAGGTTGGTCTTTGCACTTGGGTaGCTTGGGCACAGGCATGGTTGGTTCCTGAGGAAAGCAAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: FNSQRKQYRLVFALG*LGHRHGWFLRKANV Trigger: CACATTTGCTTTCCTCAGGAACCAACCATGCCTGTGCCCAAGCCACCCAAGTGCAAAGACCAACCTGTATTGCTTCCTTTGACTGTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS-3UTR CAA 90 bp | GAAACGTCACTGACGATGATCTCTGGAGAGAAGTCACCAGCTTTGCTCTTTGAGACAAAGTGCATGGCTTaGCTGTTGTTGCTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ETSLTMISGEKSPALLFETKCMA*LLLLLL Trigger: GAGCAGCAGCAACAACAGCAAAGCCATGCACTTTGT...CTCAAAGAGCAAAGCTGGTGACTTCTCTCCAGAGATCATCGTCAGTGACGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS TCA 90 bp | ATGCTTCCCACGAAGGTGCCTGTACAAAGAACAAAATCCTCACCTTaGGACAACCATAACCAAGCTCCTGGGAGGCAGTTGCATTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: MLPTKVPVQRTKSSP*DNHNQAPGRQLHFQ Trigger: TTGGAAATGCAACTGCCTCCCAGGAGCTTGGTTATGGTTGTCTCAAGGTGAGGATTTTGTTCTTTGTACAGGCACCTTCGTGGGAAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCAGTGTACTTTATACAAGGCTTATTTTCTCGTAGGAAGGTCCTGGGGCTGAGGAAGCAATACAGGTaGGTCTTTGCACTTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CPVYFIQGLFSRRKVLGLRKQYR*VFALGW Trigger: CCACCCAAGTGCAAAGACCAACCTGTATTGCTTCCT...CAGCCCCAGGACCTTCCTACGAGAAAATAAGCCTTGTATAAAGTACACTGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS CCA 90 bp | GGCTTTAATTTGTTAGTTTCAACAGTCAAAGGAAGCAATACAGGTTaGTCTTTGCACTTGGGTGGCTTGGGCACAGGCATGGTTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GFNLLVSTVKGSNTG*SLHLGGLGTGMVGS Trigger: GGAACCAACCATGCCTGTGCCCAAGCCACCCAAGTGCAAAGACCAACCTGTATTGCTTCCTTTGACTGTTGAAACTAACAAATTAAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS-3UTR CAA 90 bp | ATGATCTCTGGAGAGAAGTCACCAGCTTTGCTCTTTGAGATTGTGTATGTGAGGCAGCCGTTAAAACCTTaGTCATGTTTCCAGCGACAG | + |
|
Preference number: 5 (lower is better) Translates to: MISGEKSPALLFEIVYVRQPLKP*SCFQRQ Trigger: CTGTCGCTGGAAACATGACAAAGGTTTTAACGGCTG...CCTCACATACACAATCTCAAAGAGCAAAGCTGGTGACTTCTCTCCAGAGATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTCAGAGCTTGTAGTAATTATCTTGGCAGGCAAGCACTGGCTTTCCTTGCTAAGAAAAGCCTTGCTTaGAAAGTACAGTCGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EFRACSNYLGRQALAFLAKKSLA*KVQSMS Trigger: AGACATCGACTGTACTTTCAAAGCAAGGCTTTTCTT...AGCAAGGAAAGCCAGTGCTTGCCTGCCAAGATAATTACTACAAGCTCTGAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
||
| CDS TCA 90 bp | GGCTTTGCTGTTGTTGCTGCTGCTCTGTTAAGAAAAGCCTTGCTTTaGAAGTACAGTCGATGTCTTGGCTTTAATTTGTTAGTTTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: GFAVVAAALLRKALL*KYSRCLGFNLLVST Trigger: TGTTGAAACTAACAAATTAAAGCCAAGACATCGACTGTACTTTCAAAGCAAGGCTTTTCTTAACAGAGCAGCAGCAACAACAGCAAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| CDS TCA 72 bp | GATGACTGGCGAGTTGGGGTCGCTGTATTCCCAGCTTaGGGCCGCGGGACCCTCGAGGTGAGCGGCGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: DDWRVGVAVFPA*GRGTLEVSGAR Trigger: TCGGGCGCCGCTCACCTCGAGGGTCCCGCGGCCTCAAGCTGGGAATACAGCGACCCCAACTCGCCAGTCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033961.7 ENSMUST00000210536.2 ENSMUST00000210758.2 |
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| CDS GCA 72 bp | GCCGTAGCATTAAACGAGTGGCTCCGAGAAACACAGTaGAGCAGCAGCAGGTTCCCCAATAGCAGGGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: AVALNEWLRETQ*SSSRFPNSRAA Trigger: GGCGGCCCTGCTATTGGGGAACCTGCTGCTGCTGCACTGTGTTTCTCGGAGCCACTCGTTTAATGCTACGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033961.7 ENSMUST00000210536.2 ENSMUST00000210758.2 |
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| CDS CCA 72 bp | GGTGTGAGATCCAGTTCGGCCGTAGCATTAAACGAGTaGCTCCGAGAAACACAGTGCAGCAGCAGCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: GVRSSSAVALNE*LRETQCSSSRF Trigger: GAACCTGCTGCTGCTGCACTGTGTTTCTCGGAGCCACTCGTTTAATGCTACGGCCGAACTGGATCTCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033961.7 ENSMUST00000210536.2 ENSMUST00000210758.2 |
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| CDS CAA 72 bp | AATTCCCTCCAGGGCTCTGCACTGGACTGCAGTGTGTaGCACATCACTGTACGCCTGACCCCCAAACTTGAG | + |
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Preference number: 6 (lower is better) Translates to: NSLQGSALDCSV*HITVRLTPKLE Trigger: CTCAAGTTTGGGGGTCAGGCGTACAGTGATGTGCAACACACTGCAGTCCAGTGCAGAGCCCTGGAGGGAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033961.7 |
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| CDS CAA 90 bp | GGCACACTCAATTCCCTCCAGGGCTCTGCACTGGACTGCAGTGTGTaGCACATCACTGTACGCCTGACCCCCAAACTTGAGACAACCATA | + |
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Preference number: 6 (lower is better) Translates to: GTLNSLQGSALDCSV*HITVRLTPKLETTI Trigger: TATGGTTGTCTCAAGTTTGGGGGTCAGGCGTACAGTGATGTGCAACACACTGCAGTCCAGTGCAGAGCCCTGGAGGGAATTGAGTGTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033961.7 |
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| CDS CCA 72 bp | GTCTTTGCACTTGGGTGGCTTGGGCACAGGCATGGTTaGTTCCTGAGGAAAGCAAATGTGCTCTTCAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: VFALGWLGHRHG*FLRKANVLFSR Trigger: ACGGCTGAAGAGCACATTTGCTTTCCTCAGGAACCAACCATGCCTGTGCCCAAGCCACCCAAGTGCAAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| CDS TCA 72 bp | TGTGTTGCACATCACTGTACGCCTGACCCCCAAACTTaGGACAACCATAACCAAGCTCCTGGGAGGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: CVAHHCTPDPQT*DNHNQAPGRQL Trigger: CAACTGCCTCCCAGGAGCTTGGTTATGGTTGTCTCAAGTTTGGGGGTCAGGCGTACAGTGATGTGCAACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033961.7 |
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| CDS TCA 72 bp | CACTTGGGTGGCTTGGGCACAGGCATGGTTGGTTCCTaGGGAAAGCAAATGTGCTCTTCAGCCGTTAAAACC | + |
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Preference number: 6 (lower is better) Translates to: HLGGLGTGMVGS*GKQMCSSAVKT Trigger: GGTTTTAACGGCTGAAGAGCACATTTGCTTTCCTCAGGAACCAACCATGCCTGTGCCCAAGCCACCCAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| CDS GCA 72 bp | CTTGAGACAACCATAACCAAGCTCCTGGGAGGCAGTTaGATTTCCAACGTGATCCACTGGGGCATCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: LETTITKLLGGS*ISNVIHWGITV Trigger: GACTGTGATGCCCCAGTGGATCACGTTGGAAATGCAACTGCCTCCCAGGAGCTTGGTTATGGTTGTCTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033961.7 ENSMUST00000210758.2 |
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| CDS CCA 72 bp | CAAAGGAAGCAATACAGGTTGGTCTTTGCACTTGGGTaGCTTGGGCACAGGCATGGTTGGTTCCTGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: QRKQYRLVFALG*LGHRHGWFLRK Trigger: TTTCCTCAGGAACCAACCATGCCTGTGCCCAAGCCACCCAAGTGCAAAGACCAACCTGTATTGCTTCCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| CDS CAA 90 bp | ATACAGGTTGGTCTTTGCACTTGGGTGGCTTGGGCACAGGCATGGTaGGTTCCTGAGGAAAGCAAATGTGCTCTTCAGCCGTTAAAACCT | + |
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Preference number: 6 (lower is better) Translates to: IQVGLCTWVAWAQAW*VPEESKCALQPLKP Trigger: AGGTTTTAACGGCTGAAGAGCACATTTGCTTTCCTCAGGAACCAACCATGCCTGTGCCCAAGCCACCCAAGTGCAAAGACCAACCTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| CDS CAA 72 bp | GTTTCAACAGTCAAAGGAAGCAATACAGGTTGGTCTTaGCACTTGGGTGGCTTGGGCACAGGCATGGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: VSTVKGSNTGWS*HLGGLGTGMVG Trigger: ACCAACCATGCCTGTGCCCAAGCCACCCAAGTGCAAAGACCAACCTGTATTGCTTCCTTTGACTGTTGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| CDS GCA 72 bp | TTCTTTAACAGCACCCGGCCATGCTTCCCACGAAGGTaGCTGTACAAAGAACAAAATCCTCACCTTGAGACA | + |
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Preference number: 6 (lower is better) Translates to: FFNSTRPCFPRR*LYKEQNPHLET Trigger: TGTCTCAAGGTGAGGATTTTGTTCTTTGTACAGGCACCTTCGTGGGAAGCATGGCCGGGTGCTGTTAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| CDS CCA 72 bp | TTGTTAGTTTCAACAGTCAAAGGAAGCAATACAGGTTaGTCTTTGCACTTGGGTGGCTTGGGCACAGGCATG | + |
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Preference number: 6 (lower is better) Translates to: LLVSTVKGSNTG*SLHLGGLGTGM Trigger: CATGCCTGTGCCCAAGCCACCCAAGTGCAAAGACCAACCTGTATTGCTTCCTTTGACTGTTGAAACTAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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| CDS CAA 72 bp | TTTGTTAGTTTCAACAGTCAAAGGAAGCAATACAGGTaGGTCTTTGCACTTGGGTGGCTTGGGCACAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: FVSFNSQRKQYR*VFALGWLGHRH Trigger: ATGCCTGTGCCCAAGCCACCCAAGTGCAAAGACCAACCTGTATTGCTTCCTTTGACTGTTGAAACTAACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210758.2 |
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