Pregenerated sensors for TLX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068327Ensembl transcript IDs: ENSMUST00000089641.6, ENSMUST00000174674.3
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCAGCGGTGGCCGCAGCGGCCGGGGCAGCGCGTCTTGCTGCAGGTaGAGCAGCAGGCGACCAGCGCGGTGCCGCTCGGCCTCGCGCTCC | + |
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Preference number: 1 (lower is better) Translates to: GSGGRSGRGSASCCR*SSRRPARCRSASRS Trigger: GGAGCGCGAGGCCGAGCGGCACCGCGCTGGTCGCCTGCTGCTGCACCTGCAGCAAGACGCGCTGCCCCGGCCGCTGCGGCCACCGCTGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR GCA 90 bp | GGGTCCGGTGGCAGCGGTGGCCGCAGCGGCCGGGGCAGCGCGTCTTaGTGCAGGTGCAGCAGCAGGCGACCAGCGCGGTGCCGCTCGGCC | + |
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Preference number: 1 (lower is better) Translates to: GSGGSGGRSGRGSAS*CRCSSRRPARCRSA Trigger: GGCCGAGCGGCACCGCGCTGGTCGCCTGCTGCTGCACCTGCAGCAAGACGCGCTGCCCCGGCCGCTGCGGCCACCGCTGCCACCGGACCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR CCA 90 bp | CTTCTGCTCCTCACTCTTCGCTGGCGGTACGGCACCCGGCCACGTTaGCGCTCGTCGGGCAGGTGTCGGTCACACCACCGAGGCGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: LLLLTLRWRYGTRPR*RSSGRCRSHHRGEP Trigger: GGGCTCGCCTCGGTGGTGTGACCGACACCTGCCCGACGAGCGCCAACGTGGCCGGGTGCCGTACCGCCAGCGAAGAGTGAGGAGCAGAAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR TCA 90 bp | CCTTTACACCAGCTCTGTGGTCCCTTCCCAGCAGGACCTGAGCTCTaGGCCCACTCAGGGCAAAGTCGCAGCCTTGCAGGGTCCCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: PLHQLCGPFPAGPEL*AHSGQSRSLAGSLL Trigger: AAGCAGGGACCCTGCAAGGCTGCGACTTTGCCCTGAGTGGGCTCAGAGCTCAGGTCCTGCTGGGAAGGGACCACAGAGCTGGTGTAAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR TCA 90 bp | ATATCTGCCTTTACACCAGCTCTGTGGTCCCTTCCCAGCAGGACCTaGGCTCTGAGCCCACTCAGGGCAAAGTCGCAGCCTTGCAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: ISAFTPALWSLPSRT*ALSPLRAKSQPCRV Trigger: GACCCTGCAAGGCTGCGACTTTGCCCTGAGTGGGCTCAGAGCTCAGGTCCTGCTGGGAAGGGACCACAGAGCTGGTGTAAAGGCAGATAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR-3UTR CCA 90 bp | CCCGGCCACGTTGGCGCTCGTCGGGCAGGTGTCGGTCACACCACCGAGGCGAGCGCAAAGCGGGTCCGGTaGCAGCGGTGGCCGCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: PGHVGARRAGVGHTTEASAKRVR*QRWPQR Trigger: CCGCTGCGGCCACCGCTGCCACCGGACCCGCTTTGC...GCTCGCCTCGGTGGTGTGACCGACACCTGCCCGACGAGCGCCAACGTGGCCGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTCGCTGGCGCTCCTCCGCGGTCTaGCGCCTGGGCGAGCGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SLRGRPRAAGLLLLTLRWRSSAV*RLGERR Trigger: TCTCCGCTCGCCCAGGCGCCAGACCGCGGAGGAGCG...CCAGCGAAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGGCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR-3UTR GCA 90 bp | GCCACGTTGGCGCTCGTCGGGCAGGTGTCGGTCACACCACCGAGGCGAGCCCGGGCGTCTTGCTGCAGGTaGAGCAGCAGGCGACCAGCG | + |
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Preference number: 2 (lower is better) Translates to: ATLALVGQVSVTPPRRARASCCR*SSRRPA Trigger: CGCTGGTCGCCTGCTGCTGCACCTGCAGCAAGACGC...CCGGGCTCGCCTCGGTGGTGTGACCGACACCTGCCCGACGAGCGCCAACGTGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR CAA 90 bp | CCTTCTGCTCCTCACTCTTCGCTGGCGGTACGGCACCCGGCCACGTaGGCGCTCGTCGGGCAGGTGTCGGTCACACCACCGAGGCGAGCC | + |
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Preference number: 2 (lower is better) Translates to: PSAPHSSLAVRHPAT*ALVGQVSVTPPRRA Trigger: GGCTCGCCTCGGTGGTGTGACCGACACCTGCCCGACGAGCGCCAACGTGGCCGGGTGCCGTACCGCCAGCGAAGAGTGAGGAGCAGAAGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR GCA 72 bp | AGCGGTGGCCGCAGCGGCCGGGGCAGCGCGTCTTGCTaGAGGTGCAGCAGCAGGCGACCAGCGCGGTGCCGC | + |
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Preference number: 3 (lower is better) Translates to: SGGRSGRGSASC*RCSSRRPARCR Trigger: GCGGCACCGCGCTGGTCGCCTGCTGCTGCACCTGCAGCAAGACGCGCTGCCCCGGCCGCTGCGGCCACCGCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR GCA 72 bp | GGCAGCGGTGGCCGCAGCGGCCGGGGCAGCGCGTCTTaGTGCAGGTGCAGCAGCAGGCGACCAGCGCGGTGC | + |
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Preference number: 3 (lower is better) Translates to: GSGGRSGRGSAS*CRCSSRRPARC Trigger: GCACCGCGCTGGTCGCCTGCTGCTGCACCTGCAGCAAGACGCGCTGCCCCGGCCGCTGCGGCCACCGCTGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR CCA 72 bp | CCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTCGCTaGCGGTACGGCACCCGGCCACGTTGGCGCTCGTCG | + |
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Preference number: 3 (lower is better) Translates to: PRAAGLLLLTLR*RYGTRPRWRSS Trigger: CGACGAGCGCCAACGTGGCCGGGTGCCGTACCGCCAGCGAAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| 3UTR-3UTR CAA 90 bp | AGCCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTCGCTGGCCGGGGCAGCGCGTCTaGCTGCAGGTGCAGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SLRGRPRAAGLLLLTLRWPGQRV*LQVQQQ Trigger: CTGCTGCTGCACCTGCAGCAAGACGCGCTGCCCCGG...CCAGCGAAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR-3UTR CAA 90 bp | GCCACGTTGGCGCTCGTCGGGCAGGTGTCGGTCACACCACCGAGGCGAGCCCGGACCGAAGCCACCTTGTaGTCTTCCGCCCAGGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: ATLALVGQVSVTPPRRARTEATL*SSAQGC Trigger: GCAGCCCTGGGCGGAAGACAACAAGGTGGCTTCGGT...CCGGGCTCGCCTCGGTGGTGTGACCGACACCTGCCCGACGAGCGCCAACGTGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR GCA 72 bp | GACGAGGTCCCTGTCACAGTAGGCCACATTCTCTACTaGCAGCGCCTCTTCCATTACCCCTCCCCCGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: DEVPVTVGHILY*QRLFHYPSPAV Trigger: GACAGCGGGGGAGGGGTAATGGAAGAGGCGCTGGCAGTAGAGAATGTGGCCTACTGTGACAGGGACCTCGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR TCA 72 bp | TTTACACCAGCTCTGTGGTCCCTTCCCAGCAGGACCTaGGCTCTGAGCCCACTCAGGGCAAAGTCGCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: FTPALWSLPSRT*ALSPLRAKSQP Trigger: AGGCTGCGACTTTGCCCTGAGTGGGCTCAGAGCTCAGGTCCTGCTGGGAAGGGACCACAGAGCTGGTGTAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR GCA 72 bp | CGCAGCCTTGCAGGGTCCCTGCTTCATCCACAATCCTaGAGGTTGCTCTTGCAACCCACATCTCAGCGGGGT | + |
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Preference number: 3 (lower is better) Translates to: RSLAGSLLHPQS*RLLLQPTSQRG Trigger: ACCCCGCTGAGATGTGGGTTGCAAGAGCAACCTGCAGGATTGTGGATGAAGCAGGGACCCTGCAAGGCTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| 3UTR-3UTR CAA 90 bp | CCAAAGAGCCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTAAACAAAACAAAACCTaGAAGGGCGGAGTCAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: PKSLRGRPRAAGLLLLTLKQNKT*KGGVRV Trigger: CACTCTGACTCCGCCCTTCAAGGTTTTGTTTTGTTT...AAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGGCTCTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR CCA 90 bp | CCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTCGCTGGCGGCAAAGCGGGTCCGGTaGCAGCGGTGGCCGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: PQRTAAGRGPSAPHSSLAAKRVR*QRWPQR Trigger: CCGCTGCGGCCACCGCTGCCACCGGACCCGCTTTGC...CGCCAGCGAAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089641.6 |
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| CDS-3UTR TCA 90 bp | GGCCAGGGGCCACTGATGACCAAAGAGCCTCAGAGGACGGCCGCGGGCCGCGGGCCATCCAGGGGAAGGTaGGTCCCGCTAGGCCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: GQGPLMTKEPQRTAAGRGPSRGR*VPLGPR Trigger: CCGGGGGCCTAGCGGGACTCACCTTCCCCTGGATGG...CCCGCGGCCCGCGGCCGTCCTCTGAGGCTCTTTGGTCATCAGTGGCCCCTGGCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR CCA 90 bp | CAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTCGCTGGCGGTATCATGCGCAGGGCCTTaGCCAGCGCCGCCCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QRTAAGRGPSAPHSSLAVSCAGP*PAPPSL Trigger: CAGAGAGGGCGGCGCTGGCCAAGGCCCTGCGCATGA...TACCGCCAGCGAAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR GCA 90 bp | CCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTCGCTGGCGCTGATGGGTTCGTGGTaGGGAAGGTGGTGCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PQRTAAGRGPSAPHSSLALMGSW*GRWCAA Trigger: GGCTGCGCACCACCTTCCGCACCACGAACCCATCAG...CGCCAGCGAAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR GCA 90 bp | GGGCCAGGGGCCACTGATGACCAAAGAGCCTCAGAGGACGGCCGCGGGCCGCGGCGTGAGCCTGTCCTTTaGAAAGCGGCGGCCGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: GPGATDDQRASEDGRGPRREPVL*KAAAAV Trigger: GACAGCGGCCGCCGCTTTGCAAAGGACAGGCTCACG...CCGCGGCCCGCGGCCGTCCTCTGAGGCTCTTTGGTCATCAGTGGCCCCTGGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR GCA 90 bp | CCCGGCCACGTTGGCGCTCGTCGGGCAGGTGTCGGTCACACCACCGAGGCGAGCTCCAGCTCCAGCACCTaGGAGCGGGAAAAGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: PGHVGARRAGVGHTTEASSSSST*EREKEV Trigger: CACCTCCTTTTCCCGCTCGCAGGTGCTGGAGCTGGA...GCTCGCCTCGGTGGTGTGACCGACACCTGCCCGACGAGCGCCAACGTGGCCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| CDS-3UTR GCA 90 bp | GCCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTCGCTGGCAACCAGGTCTTGACCTaGGCGTCCGTCATGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ASEDGRGPRAFCSSLFAGNQVLT*ASVMRR Trigger: CCTGCGCATGACGGACGCGCAGGTCAAGACCTGGTT...GCCAGCGAAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR GCA 90 bp | AGAGCCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTCGCTGCGTCTTGCTGCAGGTaGAGCAGCAGGCGACCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RASEDGRGPRAFCSSLFAASCCR*SSRRPA Trigger: CGCTGGTCGCCTGCTGCTGCACCTGCAGCAAGACGC...AGCGAAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGGCTCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089641.6 |
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| CDS-3UTR CCA 90 bp | CGGTCACACCACCGAGGCGAGCCCGGACACCGAAGCCACCTTGTTGTCTTCCGCGGCCAGCGAGCCGGCTaGAGCATAGCCCGAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RSHHRGEPGHRSHLVVFRGQRAG*SIARGS Trigger: GGAGCCTCGGGCTATGCTCCAGCCGGCTCGCTGGCC...GCGGAAGACAACAAGGTGGCTTCGGTGTCCGGGCTCGCCTCGGTGGTGTGACCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGAGCCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTCATGCGCAGGGCCTTaGCCAGCGCCGCCCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: TKEPQRTAAGRGPSAPHSSCAGP*PAPPSL Trigger: CAGAGAGGGCGGCGCTGGCCAAGGCCCTGCGCATGA...AGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGGCTCTTTGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR GCA 90 bp | GCCACTGATGACCAAAGAGCCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCCGTGAGCCTGTCCTTTaGAAAGCGGCGGCCGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: ATDDQRASEDGRGPRAFCREPVL*KAAAAV Trigger: GACAGCGGCCGCCGCTTTGCAAAGGACAGGCTCACG...GCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGGCTCTTTGGTCATCAGTGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR GCA 90 bp | AGCCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTCGCTGGAGCGGGAAAAGGAGGTaGGCGGCTTCTTGCGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: SLRGRPRAAGLLLLTLRWSGKRR*AASCAS Trigger: CGAAGCGCAAGAAGCCGCGCACCTCCTTTTCCCGCT...CCAGCGAAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR TCA 90 bp | AGGGCGGAGTCAGAGTGTGGGCCAGGGGCCACTGATGACCAAAGAGCCTCAGAGCCATCCAGGGGAAGGTaGGTCCCGCTAGGCCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: RAESECGPGATDDQRASEPSRGR*VPLGPR Trigger: CCGGGGGCCTAGCGGGACTCACCTTCCCCTGGATGG...CTCTGAGGCTCTTTGGTCATCAGTGGCCCCTGGCCCACACTCTGACTCCGCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR TCA 90 bp | AAAGAGCCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTCGGCGAGAGCGCAGCCGTaGGCCTGTCCTTTGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: KEPQRTAAGRGPSAPHSSARAQP*ACPLQS Trigger: GCTTTGCAAAGGACAGGCTCACGGCTGCGCTCTCGC...CGAAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGGCTCTTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR GCA 90 bp | TGTGGGCCAGGGGCCACTGATGACCAAAGAGCCTCAGAGGACGGCCGCGGGCCGAGCGGGAAAAGGAGGTaGGCGGCTTCTTGCGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: CGPGATDDQRASEDGRGPSGKRR*AASCAS Trigger: CGAAGCGCAAGAAGCCGCGCACCTCCTTTTCCCGCT...CGGCCCGCGGCCGTCCTCTGAGGCTCTTTGGTCATCAGTGGCCCCTGGCCCACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR GCA 90 bp | AGAGCCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTCGCTTCCAGCTCCAGCACCTaGGAGCGGGAAAAGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: RASEDGRGPRAFCSSLFASSSST*EREKEV Trigger: CACCTCCTTTTCCCGCTCGCAGGTGCTGGAGCTGGA...AGCGAAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGGCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR GCA 90 bp | AAGAGCCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTCGCAACCAGGTCTTGACCTaGGCGTCCGTCATGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KSLRGRPRAAGLLLLTLRNQVLT*ASVMRR Trigger: CCTGCGCATGACGGACGCGCAGGTCAAGACCTGGTT...GCGAAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGGCTCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR CCA 90 bp | GAAGGGCGGAGTCAGAGTGTGGGCCAGGGGCCACTGATGACCAAAGAGCCTCAGGGCCAGCGAGCCGGCTaGAGCATAGCCCGAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: EGRSQSVGQGPLMTKEPQGQRAG*SIARGS Trigger: GGAGCCTCGGGCTATGCTCCAGCCGGCTCGCTGGCC...CTGAGGCTCTTTGGTCATCAGTGGCCCCTGGCCCACACTCTGACTCCGCCCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR CCA 90 bp | AGGGCGGAGTCAGAGTGTGGGCCAGGGGCCACTGATGACCAAAGAGCCTCAGAGCGCTCCTCCGCGGTCTaGCGCCGCCACTTGGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: RAESECGPGATDDQRASERSSAV*RRHLVR Trigger: ACGCACCAAGTGGCGGCGCCAGACCGCGGAGGAGCG...CTCTGAGGCTCTTTGGTCATCAGTGGCCCCTGGCCCACACTCTGACTCCGCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089641.6 |
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| CDS-3UTR GCA 90 bp | AGAGCCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTCGCTGGTAGGGATGGCCTATaGGACGTGTCCCAGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: RASEDGRGPRAFCSSLFAGRDGL*DVSQRR Trigger: CCTTCTCTGGGACACGTCGCATAGGCCATCCCTACC...AGCGAAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGGCTCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR GCA 90 bp | GAGTCAGAGTGTGGGCCAGGGGCCACTGATGACCAAAGAGCCTCAGAGGACGGCCGGGGCAGCGCGTCTTaGTGCAGGTGCAGCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ESECGPGATDDQRASEDGRGSAS*CRCSSR Trigger: CCTGCTGCTGCACCTGCAGCAAGACGCGCTGCCCCG...GCCGTCCTCTGAGGCTCTTTGGTCATCAGTGGCCCCTGGCCCACACTCTGACTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089641.6 |
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| CDS-3UTR TCA 90 bp | GGGCGGAGTCAGAGTGTGGGCCAGGGGCCACTGATGACCAAAGAGCCTCAGAGGGCGAGAGCGCAGCCGTaGGCCTGTCCTTTGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: GRSQSVGQGPLMTKEPQRARAQP*ACPLQS Trigger: GCTTTGCAAAGGACAGGCTCACGGCTGCGCTCTCGC...CCTCTGAGGCTCTTTGGTCATCAGTGGCCCCTGGCCCACACTCTGACTCCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR GCA 90 bp | TTTGATATCTGCCTTTACACCAGCTCTGTGGTCCCTTCCCAGCAGGACCTGAGCCTGATGGGTTCGTGGTaGGGAAGGTGGTGCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: FDICLYTSSVVPSQQDLSLMGSW*GRWCAA Trigger: GGCTGCGCACCACCTTCCGCACCACGAACCCATCAG...GCTCAGGTCCTGCTGGGAAGGGACCACAGAGCTGGTGTAAAGGCAGATATCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174674.3 |
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| CDS-3UTR CAA 90 bp | AGAGCCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTCGCTGTCATGCGCAGGGCCTaGGCCAGCGCCGCCCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: RASEDGRGPRAFCSSLFAVMRRA*ASAALS Trigger: AGAGAGGGCGGCGCTGGCCAAGGCCCTGCGCATGAC...AGCGAAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGGCTCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAGAGCCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTGTCATGCGCAGGGCCTaGGCCAGCGCCGCCCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: TKEPQRTAAGRGPSAPHSVMRRA*ASAALS Trigger: AGAGAGGGCGGCGCTGGCCAAGGCCCTGCGCATGAC...AGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGGCTCTTTGGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS CCA 90 bp | GGGGCCCACTCCCGAGCCTCTAGGCAAGGAGGCCAGCGAGCCGGCTaGAGCATAGCCCGAGGCTCCGTGGAATCCACTGGAAAACGCCGC | + |
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Preference number: 5 (lower is better) Translates to: GAHSRASRQGGQRAG*SIARGSVESTGKRR Trigger: GCGGCGTTTTCCAGTGGATTCCACGGAGCCTCGGGCTATGCTCCAGCCGGCTCGCTGGCCTCCTTGCCTAGAGGCTCGGGAGTGGGCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS CCA 90 bp | CCAGCGAGCCGGCTGGAGCATAGCCCGAGGCTCCGTGGAATCCACTaGAAAACGCCGCACTTTCTCCGTGGCTCTGGCCCGACTGACCGG | + |
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Preference number: 5 (lower is better) Translates to: PASRLEHSPRLRGIH*KTPHFLRGSGPTDR Trigger: CCGGTCAGTCGGGCCAGAGCCACGGAGAAAGTGCGGCGTTTTCCAGTGGATTCCACGGAGCCTCGGGCTATGCTCCAGCCGGCTCGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS-3UTR CAA 90 bp | GAGTCAGAGTGTGGGCCAGGGGCCACTGATGACCAAAGAGCCTCAGAGGACGGCCCGGGGCAGCGCGTCTaGCTGCAGGTGCAGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: ESECGPGATDDQRASEDGPGQRV*LQVQQQ Trigger: CTGCTGCTGCACCTGCAGCAAGACGCGCTGCCCCGG...GCCGTCCTCTGAGGCTCTTTGGTCATCAGTGGCCCCTGGCCCACACTCTGACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089641.6 |
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| CDS-3UTR CAA 90 bp | CCAAAGAGCCTCAGAGGACGGCCGCGGGCCGCGGGCCTTCTGCTCCTCACTCTTACCGAAGCCACCTTGTaGTCTTCCGCCCAGGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PKSLRGRPRAAGLLLLTLTEATL*SSAQGC Trigger: GCAGCCCTGGGCGGAAGACAACAAGGTGGCTTCGGT...AAGAGTGAGGAGCAGAAGGCCCGCGGCCCGCGGCCGTCCTCTGAGGCTCTTTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089641.6 |
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| CDS CCA 72 bp | TCCCGAGCCTCTAGGCAAGGAGGCCAGCGAGCCGGCTaGAGCATAGCCCGAGGCTCCGTGGAATCCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: SRASRQGGQRAG*SIARGSVESTG Trigger: TCCAGTGGATTCCACGGAGCCTCGGGCTATGCTCCAGCCGGCTCGCTGGCCTCCTTGCCTAGAGGCTCGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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| CDS CCA 72 bp | CGGCTGGAGCATAGCCCGAGGCTCCGTGGAATCCACTaGAAAACGCCGCACTTTCTCCGTGGCTCTGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: RLEHSPRLRGIH*KTPHFLRGSGP Trigger: CGGGCCAGAGCCACGGAGAAAGTGCGGCGTTTTCCAGTGGATTCCACGGAGCCTCGGGCTATGCTCCAGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089641.6 ENSMUST00000174674.3 |
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