Pregenerated sensors for TLR9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045322Ensembl transcript IDs: ENSMUST00000062241.11
Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | TGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTaGAAGATGCATGGGAAGAAAACTACCCTTTACAGC | + |
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Preference number: 3 (lower is better) Translates to: CSVWVWCLSSLS*KMHGKKTTLYS Trigger: GCTGTAAAGGGTAGTTTTCTTCCCATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | AGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTCGGGAACCAGACATGCTACGGCCCTGCAGCTaGCCGGGGCTGCCACACTTC | + |
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Preference number: 4 (lower is better) Translates to: SGVVRQSKAGRATREPDMLRPCS*PGLPHF Trigger: GAAGTGTGGCAGCCCCGGCCAGCTGCAGGGCCGTAG...CATGTCTGGTTCCCGAGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | GTGGAGGGGCAGAGAATGAACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATGCCCAGGAGGGCGCCTaGGGTCACCTTCACCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VEGQRMNSSPVLCGFGVYAQEGA*GHLHRS Trigger: GGAGCGGTGAAGGTGACCCCAGGCGCCCTCCTGGGC...ATAGACACCAAACCCACACAGAACAGGACTGGAGTTCATTCTCTGCCCCTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | GCGCACTTGCCAAATAGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTCAGTCCACCAGGCCATaGGGCTTCAGCTCACAGGGT | + |
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Preference number: 4 (lower is better) Translates to: AHLPNSGVVRQSKAGRATQSTRP*GFSSQG Trigger: ACCCTGTGAGCTGAAGCCTCATGGCCTGGTGGACTG...AGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCTATTTGGCAAGTGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | GGTGGAGGGGCAGAGAATGAACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTACCAGCACCGAGAGGTTaGCCAGACCTTGGAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: GGGAENELQSCSVWVWCLPAPRG*PDLGTR Trigger: CCTGGTTCCAAGGTCTGGTCAACCTCTCGGTGCTGG...TAGACACCAAACCCACACAGAACAGGACTGGAGTTCATTCTCTGCCCCTCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | CTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGGGAATGCGCAGGAGGCCACTaGCGCGGTCCGTGTGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LFCVGLVSIFTLLKDAWECAGGH*RGPCGP Trigger: TGGCCCACACGGACCGCGTCAGTGGCCTCCTGCGCA...TTCCCATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | ATTGCGCACTTGCCAAATAGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCATCCAACAGGCGCTGCTaGGCCAGCAGGAAGCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: IAHLPNSGVVRQSKAGRASNRRC*ASRKLV Trigger: CACCAGCTTCCTGCTGGCTCAGCAGCGCCTGTTGGA...TGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCTATTTGGCAAGTGCGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | GCGCACTTGCCAAATAGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTTCAAGGAGAGGCGGGTaGTGTTGGAGCAGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: AHLPNSGVVRQSKAGRATSRRGG*CWSRML Trigger: CAGCATCCTGCTCCAACATCACCCGCCTCTCCTTGA...AGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCTATTTGGCAAGTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | GCGCACTTGCCAAATAGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTTCCAGATGGCTCAGGTaGTGGAAGGTCTCAGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: AHLPNSGVVRQSKAGRATSRWLR*WKVSGC Trigger: GCACCCTGAGACCTTCCATCACCTGAGCCATCTGGA...AGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCTATTTGGCAAGTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | GGTGGAGGGGCAGAGAATGAACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTAGTCAGCGGCAGGAACTaGGAGCCATTGACAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: GGGAENELQSCSVWVWCLVSGRN*EPLTAC Trigger: ACAGGCTGTCAATGGCTCTCAGTTCCTGCCGCTGAC...TAGACACCAAACCCACACAGAACAGGACTGGAGTTCATTCTCTGCCCCTCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | GCGCACTTGCCAAATAGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTGACAGGTCCAGCACCTaGAGATTAGTCAGCGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AHLPNSGVVRQSKAGRATDRSST*RLVSGR Trigger: CCTGCCGCTGACTAATCTGCAGGTGCTGGACCTGTC...AGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCTATTTGGCAAGTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | CTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGGGAAGGAGGTACTCCAGGCTaGGGGGCAGTTGGCGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LFCVGLVSIFTLLKDAWEGGTPG*GAVGGA Trigger: TGCCCCGCCAACTGCCCCCCAGCCTGGAGTACCTCC...TTCCCATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | GCGCACTTGCCAAATAGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTCCAGGCCAGGCACCTTaGTCTGCACCTCCAACAGTA | + |
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Preference number: 4 (lower is better) Translates to: AHLPNSGVVRQSKAGRATPGQAP*SAPPTV Trigger: TACTGTTGGAGGTGCAGACCAAGGTGCCTGGCCTGG...AGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCTATTTGGCAAGTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | GGTGGAGGGGCAGAGAATGAACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTACTGACGCGGTCCGTGTaGGCCAGCACAAATAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: GGGAENELQSCSVWVWCLLTRSV*ASTNRV Trigger: GACTCTATTTGTGCTGGCCCACACGGACCGCGTCAG...TAGACACCAAACCCACACAGAACAGGACTGGAGTTCATTCTCTGCCCCTCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | ATTGCGCACTTGCCAAATAGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCAAGGAGGGACAAGGGGTaGAGAGTCCTTCGACGGAGA | + |
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Preference number: 4 (lower is better) Translates to: IAHLPNSGVVRQSKAGRARRDKG*RVLRRR Trigger: TCTCCGTCGAAGGACTCTGCACCCCTTGTCCCTCCT...TGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCTATTTGGCAAGTGCGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | AGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCGTGGGCCTGAGTCTCAGCCAGCACTaGAGCCTGTACCAGGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RCMGRKLPFTANLCSVGLSLSQH*SLYQEG Trigger: TCCCTCCTGGTACAGGCTGCAGTGCTGGCTGAGACT...CAGGCCCACGGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | GGTGGAGGGGCAGAGAATGAACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTACTGCTCTGCATCATCTaGCTCTTCAGGGGTGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GGGAENELQSCSVWVWCLLLCII*LFRGGF Trigger: GAAGCCACCCCTGAAGAGGCAGATGATGCAGAGCAG...TAGACACCAAACCCACACAGAACAGGACTGGAGTTCATTCTCTGCCCCTCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | TGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTCGGGAACCAGACATGAAGATGCCCCACAGGCACAGTaGAGAGGGTTGCTTCTCACG | + |
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Preference number: 4 (lower is better) Translates to: CSKTEQGRQSNSGTRHEDAPQAQ*RGLLLT Trigger: CGTGAGAAGCAACCCTCTGCACTGTGCCTGTGGGGC...ATCTTCATGTCTGGTTCCCGAGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | AGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGCCCTGCCCGTTGGGCTaGTGGGGCCAGAAGAGCACA | + |
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Preference number: 4 (lower is better) Translates to: SPVLCGFGVYLHSPERCMPCPLG*WGQKST Trigger: TGTGCTCTTCTGGCCCCAGCAGCCCAACGGGCAGGG...CATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | TCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCGATTCACCAGGGAGCTaGGCAGTCGGGGCACAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SSPVLCGFGVYLHSPERCDSPGS*AVGAQW Trigger: CCACTGTGCCCCGACTGCCCAGCTCCCTGGTGAATC...GCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | AGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCGTGGGCCTGTCCCAGCCGCAGAGATaGTGCAGTATAGGCACCACC | + |
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Preference number: 4 (lower is better) Translates to: RCMGRKLPFTANLCSVGLSQPQR*CSIGTT Trigger: GGTGGTGCCTATACTGCACCATCTCTGCGGCTGGGA...CAGGCCCACGGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGAGCAACTCGGGAACCAGACATGAAGATGCAGCTGTTTCCAGCTGTTTGCGGCTCCCATAGATaGAAGCCCAGAGGTTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: AGRATREPDMKMQLFPAVCGSHR*KPRGSR Trigger: TCGAGAACCTCTGGGCTTCCATCTATGGGAGCCGCA...AACAGCTGGAAACAGCTGCATCTTCATGTCTGGTTCCCGAGTTGCTCTGCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | AGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCGTGGGCCTGTCAGAGACAGATGGGTaGGATTGCTCAGGCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RCMGRKLPFTANLCSVGLSETDG*DCSGPG Trigger: TCCTGGGCCTGAGCAATCTCACCCATCTGTCTCTGA...CAGGCCCACGGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | GTGGAGGGGCAGAGAATGAACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATAGGCGGGTTAGGTTCTaGAAGGCATTGGTGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: VEGQRMNSSPVLCGFGVYRRVRF*KALVWV Trigger: CACCCACACCAATGCCTTTCAGAACCTAACCCGCCT...ATAGACACCAAACCCACACAGAACAGGACTGGAGTTCATTCTCTGCCCCTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | TGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTCGGGAACCAGACATGAAGATGTTGGAGCAGGATGCTaGCGCAGAGAAACGGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: CSKTEQGRQSNSGTRHEDVGAGC*RRETGY Trigger: GTACCCCGTTTCTCTGCGGCAGCATCCTGCTCCAAC...ATCTTCATGTCTGGTTCCCGAGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | GCGCACTTGCCAAATAGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTCTAGGACTTCCAGGTTaGGTAGGAAGGACAGACTGG | + |
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Preference number: 4 (lower is better) Translates to: AHLPNSGVVRQSKAGRATLGLPG*VGRTDW Trigger: CCAGTCTGTCCTTCCTACCCAACCTGGAAGTCCTAG...AGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCTATTTGGCAAGTGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | GCGCACTTGCCAAATAGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTCTGACATCGAGTTTCTaGAGGAGGGTGCCATTAGGC | + |
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Preference number: 4 (lower is better) Translates to: AHLPNSGVVRQSKAGRATLTSSF*RRVPLG Trigger: GCCTAATGGCACCCTCCTCCAGAAACTCGATGTCAG...AGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCTATTTGGCAAGTGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| 3UTR CAA 72 bp | CGTGGGCCTGGTGGCTTGGTAGCATATATTGCGCACTaGCCAAATAGCGGTGTAGTAAGACAGAGCAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: RGPGGLVAYIAH*PNSGVVRQSKA Trigger: TGCCTTGCTCTGTCTTACTACACCGCTATTTGGCAAGTGCGCAATATATGCTACCAAGCCACCAGGCCCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| 3UTR CAA 72 bp | CTTTACAGCCAACCTTTGCTCCGTGGGCCTGGTGGCTaGGTAGCATATATTGCGCACTTGCCAAATAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: LYSQPLLRGPGG*VAYIAHLPNSG Trigger: ACCGCTATTTGGCAAGTGCGCAATATATGCTACCAAGCCACCAGGCCCACGGAGCAAAGGTTGGCTGTAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | GCAGGCAGAGCAACTCGGGAACCAGACATGAAGATGCAGCTGTTTCCAGCTGTTACGAAGTCAGAGTTGTaGAGGTGGTGGATACGGTTG | + |
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Preference number: 4 (lower is better) Translates to: AGRATREPDMKMQLFPAVTKSEL*RWWIRL Trigger: CAACCGTATCCACCACCTGCACAACTCTGACTTCGT...AACAGCTGGAAACAGCTGCATCTTCATGTCTGGTTCCCGAGTTGCTCTGCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | AGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCGTGGGCCTGGACAACAGCTCCTCCTaGTCTGCATCATCTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: RCMGRKLPFTANLCSVGLDNSSS*SASSAS Trigger: AGAGGCAGATGATGCAGAGCAGGAGGAGCTGTTGTC...CAGGCCCACGGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | GGTGGAGGGGCAGAGAATGAACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATACTTCAGAGACAGATaGGTGAGATTGCTCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GGGAENELQSCSVWVWCLYFRDR*VRLLRP Trigger: GGGCCTGAGCAATCTCACCCATCTGTCTCTGAAGTA...TAGACACCAAACCCACACAGAACAGGACTGGAGTTCATTCTCTGCCCCTCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | ACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGTGGACAGTTCCACTTaGGGTTCAGCTGCCGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TPVLFCVGLVSIFTLLKDVDSST*GSAAAG Trigger: ACCTGCGGCAGCTGAACCTCAAGTGGAACTGTCCAC...ATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACTGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | TGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTCGGGAACCAGACATGAAGATCATGCCAGGCACAGATaGAAACAGTACCAGACGTCC | + |
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Preference number: 4 (lower is better) Translates to: CSKTEQGRQSNSGTRHEDHARHR*KQYQTS Trigger: GGACGTCTGGTACTGTTTTCATCTGTGCCTGGCATG...ATCTTCATGTCTGGTTCCCGAGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | CTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGGGAACACTTGAGGTTCAGCTaGCGCAGGTTGGACAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LFCVGLVSIFTLLKDAWEHLRFS*RRLDRW Trigger: CCACCTGTCCAACCTGCGGCAGCTGAACCTCAAGTG...TTCCCATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | TCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCCAGCCGCAGAGATGGTaGAGTATAGGCACCACCATG | + |
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Preference number: 4 (lower is better) Translates to: SSPVLCGFGVYLHSPERCQPQRW*SIGTTM Trigger: CATGGTGGTGCCTATACTGCACCATCTCTGCGGCTG...GCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | GTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGGGAAGAGGTGGTGGATACGGTTaGAGATCAAGGAGAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: VLCGFGVYLHSPERCMGRGGGYG*RSRRGG Trigger: CCCGCCTCTCCTTGATCTCCAACCGTATCCACCACC...TCTTCCCATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | TGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTCGGGAACCAGACATGAAGATACCAGGATGTTGGTGTaGCTCAGGCTCAGATTCACC | + |
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Preference number: 4 (lower is better) Translates to: CSKTEQGRQSNSGTRHEDTRMLV*LRLRFT Trigger: GGTGAATCTGAGCCTGAGCCACACCAACATCCTGGT...ATCTTCATGTCTGGTTCCCGAGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | GTGGAGGGGCAGAGAATGAACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTAGAACCAGGATGTTaGTGTGGCTCAGGCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: VEGQRMNSSPVLCGFGVYLEPGC*CGSGSD Trigger: ATCTGAGCCTGAGCCACACCAACATCCTGGTTCTAG...ATAGACACCAAACCCACACAGAACAGGACTGGAGTTCATTCTCTGCCCCTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | TCTCCTGAAAGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCGAAGGGAGGTCAGATTaGCCAGGTCTTCAGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SPERCMGRKLPFTANLCSEGRSD*PGLQAP Trigger: TGGGGCCTGAAGACCTGGCCAATCTGACCTCCCTTC...GGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCTTTCAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGAGCAACTCGGGAACCAGACATGAAGATGCAGCTGTTTCCAGCTGTTGAAGAGTTCAGTGTATaGAGAGAGCTGTCCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: AGRATREPDMKMQLFPAVEEFSV*RELSFS Trigger: GCTGAAGGACAGCTCTCTCCATACACTGAACTCTTC...AACAGCTGGAAACAGCTGCATCTTCATGTCTGGTTCCCGAGTTGCTCTGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGAGCAACTCGGGAACCAGACATGAAGATGCAGCTGTTTCCAGCTGTTAGGTTGACCAGACCTTaGAACCAGGAAGAGTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: AGRATREPDMKMQLFPAVRLTRP*NQEEFS Trigger: ACTGAACTCTTCCTGGTTCCAAGGTCTGGTCAACCT...AACAGCTGGAAACAGCTGCATCTTCATGTCTGGTTCCCGAGTTGCTCTGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | TCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCAAGGAACTTGCCAGGTaGAGGCGGGCAAAGGATACC | + |
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Preference number: 4 (lower is better) Translates to: SSPVLCGFGVYLHSPERCKELAR*RRAKDT Trigger: GGTATCCTTTGCCCGCCTCCACCTGGCAAGTTCCTT...GCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | AGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCGTGGGCCTGAAGTCCAGTTTGTTATaGGACAGGTCCAGCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: RCMGRKLPFTANLCSVGLKSSLL*DRSSTC Trigger: GCAGGTGCTGGACCTGTCCCATAACAAACTGGACTT...CAGGCCCACGGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | TCTCCTGAAAGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCGTCAGGGCCTTTAGCTaGTTGCCTGCCAGGTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: SPERCMGRKLPFTANLCSVRAFS*LPARSR Trigger: CCTAGACCTGGCAGGCAACCAGCTAAAGGCCCTGAC...GGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCTTTCAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | AGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCGTGGGCCTGACTGATGCGATTGTCTaGCAAGTCCACAAAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RCMGRKLPFTANLCSVGLTDAIV*QVHKAK Trigger: CTTCGCTTTGTGGACTTGTCAGACAATCGCATCAGT...CAGGCCCACGGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | TCTCCTGAAAGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCTGGAAGGTCTCAGGGTaGAGGTGGAGGGACTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPERCMGRKLPFTANLCSWKVSG*RWRDFW Trigger: CCAAAAGTCCCTCCACCTGCACCCTGAGACCTTCCA...GGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCTTTCAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | AGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGCAGCTCCTCCTGCTCTaGATCATCTGCCTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPVLCGFGVYLHSPERCMQLLLL*IICLFR Trigger: CCTGAAGAGGCAGATGATGCAGAGCAGGAGGAGCTG...CATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | ACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGGGCCTTTAGCTGGTTaGCTGCCAGGTCTAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: TPVLFCVGLVSIFTLLKDGPLAG*LPGLGL Trigger: AAGTCCTAGACCTGGCAGGCAACCAGCTAAAGGCCC...ATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACTGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | AGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGGGCTCAATGGTCATGTaGCAAGAGAAGTGCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPVLCGFGVYLHSPERCMGSMVM*QEKCRG Trigger: CCCCCTGCACTTCTCTTGCCACATGACCATTGAGCC...CATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | TCTCCTGAAAGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCGTCTCAGGGTGCAGGTaGAGGGACTTTTGGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SPERCMGRKLPFTANLCSVSGCR*RDFWPH Trigger: ATGTGGCCAAAAGTCCCTCCACCTGCACCCTGAGAC...GGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCTTTCAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | TCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCCAGAGCGAAGAAGGCTaGGACCACAGAGACGATACT | + |
|
Preference number: 4 (lower is better) Translates to: SSPVLCGFGVYLHSPERCQSEEG*DHRDDT Trigger: AGTATCGTCTCTGTGGTCCCAGCCTTCTTCGCTCTG...GCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | TCTCCTGAAAGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCGGAACTGAGAGCCATTaGCAGCCTGTGCAATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPERCMGRKLPFTANLCSGTESH*QPVQWS Trigger: ACTCCATTGCACAGGCTGTCAATGGCTCTCAGTTCC...GGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCTTTCAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | TCTCCTGAAAGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCTCAGGAACAGCCAATTaGAGTCCACCAGGCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPERCMGRKLPFTANLCSSGTAN*SPPGHE Trigger: CTCATGGCCTGGTGGACTGCAATTGGCTGTTCCTGA...GGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCTTTCAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | GTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGGGAAGACCAGGCACCTTGGTCTaGACCTCCAACAGTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLCGFGVYLHSPERCMGRPGTLV*TSNSKS Trigger: AGACTTACTGTTGGAGGTGCAGACCAAGGTGCCTGG...TCTTCCCATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | TCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCTGTGCAATGGAGTTGTaGCTCAGGCTAAGACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPVLCGFGVYLHSPERCCAMEL*LRLRHW Trigger: CCAGTGTCTTAGCCTGAGCCACAACTCCATTGCACA...GCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | AGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTCGGGAACCAGACATGCTGAACGATTTCCAGTaGTACAAGTCCAGTTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SGVVRQSKAGRATREPDMLNDFQ*YKSSLL Trigger: TAACAAACTGGACTTGTACCACTGGAAATCGTTCAG...CATGTCTGGTTCCCGAGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | GTGGAGGGGCAGAGAATGAACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATGTCTTGAGAATGTTGTaGCTGAGGTTGACCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VEGQRMNSSPVLCGFGVYVLRML*LRLTSF Trigger: GAAAGAGGTCAACCTCAGCCACAACATTCTCAAGAC...ATAGACACCAAACCCACACAGAACAGGACTGGAGTTCATTCTCTGCCCCTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| 3UTR CAA 72 bp | ATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTaGCTCCGTGGGCCTGGTGGCTTGGTAGCATATATT | + |
|
Preference number: 4 (lower is better) Translates to: MHGKKTTLYSQP*LRGPGGLVAYI Trigger: AATATATGCTACCAAGCCACCAGGCCCACGGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | TGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTCGGGAACCAGACATGAAGATAGGCATTGGTGTGGGTaGTGCTTTCATAGAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSKTEQGRQSNSGTRHEDRHWCG*CFHRES Trigger: ACTTTCTCTATGAAAGCATCACCCACACCAATGCCT...ATCTTCATGTCTGGTTCCCGAGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | GTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGGGAAGAGTTCAGCTCCTGCAGTaGCACCAGGTTCTTAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLCGFGVYLHSPERCMGRVQLLQ*HQVLKG Trigger: TCCTTTAAGAACCTGGTGTCACTGCAGGAGCTGAAC...TCTTCCCATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | GGTGGAGGGGCAGAGAATGAACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATTGATGAAGTTCATTTaGAGATGCAGAGTGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGGAENELQSCSVWVWCLLMKFI*RCRVWS Trigger: ACTCCACACTCTGCATCTTCAAATGAACTTCATCAA...TAGACACCAAACCCACACAGAACAGGACTGGAGTTCATTCTCTGCCCCTCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | CTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGGGAAGTTCTTAAAGGAACTTaGCAGGTGGAGGCGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFCVGLVSIFTLLKDAWEVLKGT*QVEAGK Trigger: TTTGCCCGCCTCCACCTGGCAAGTTCCTTTAAGAAC...TTCCCATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | TCTCCTGAAAGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCGCAAGCGGAAGAAGATaGCGTTCATGTTCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPERCMGRKLPFTANLCSASGRR*RSCSAP Trigger: AGGAGCTGAACATGAACGGCATCTTCTTCCGCTTGC...GGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCTTTCAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | TCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCAGGTTCTGGGCTCAATaGTCATGTGGCAAGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPVLCGFGVYLHSPERCRFWAQ*SCGKRS Trigger: ACTTCTCTTGCCACATGACCATTGAGCCCAGAACCT...GCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR TCA 90 bp | ACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGATGGGTCACAAAACTaGAATTGTGGCCTATACCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPVLFCVGLVSIFTLLKDDGSQN*NCGLYP Trigger: AGGGTATAGGCCACAATTTCAGTTTTGTGACCCATC...ATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACTGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR GCA 90 bp | AGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGTTCATGTTCAGCTCCTaGAGTGACACCAGGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SPVLCGFGVYLHSPERCMFMFSS*SDTRFL Trigger: TAAGAACCTGGTGTCACTGCAGGAGCTGAACATGAA...CATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CCA 90 bp | ACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATATTGACAAACATCTCTaGCTTGATAGTCACCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPVLFCVGLVSIFTLLKDIDKHL*LDSHQV Trigger: AACCTGGTGACTATCAAGCCAGAGATGTTTGTCAAT...ATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACTGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 90 bp | AGGCACAGCCGCAGGTCCTGCGCGAAGATGCTACGGCCCTGCAGCTaGCCGGGGCTGCCACACTTCACACCATTAGCCAGGCCAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RHSRRSCAKMLRPCS*PGLPHFTPLARPGT Trigger: GGTGCCTGGCCTGGCTAATGGTGTGAAGTGTGGCAGCCCCGGCCAGCTGCAGGGCCGTAGCATCTTCGCGCAGGACCTGCGGCTGTGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 90 bp | AAGCAGTCCCAAGAGAGGACCTCATCCAGGCACAGCCGCAGGTCCTaGGCGAAGATGCTACGGCCCTGCAGCTGGCCGGGGCTGCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: KQSQERTSSRHSRRS*AKMLRPCSWPGLPH Trigger: GTGTGGCAGCCCCGGCCAGCTGCAGGGCCGTAGCATCTTCGCGCAGGACCTGCGGCTGTGCCTGGATGAGGTCCTCTCTTGGGACTGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 90 bp | ACAGGCGCTGCTGAGCCAGCAGGAAGCTGGTGCGCAGGAGGCCACTaGCGCGGTCCGTGTGGGCCAGCACAAATAGAGTCTTGCGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TGAAEPAGSWCAGGH*RGPCGPAQIESCGS Trigger: GGAGCCGCAAGACTCTATTTGTGCTGGCCCACACGGACCGCGTCAGTGGCCTCCTGCGCACCAGCTTCCTGCTGGCTCAGCAGCGCCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 90 bp | TCATCCAGGCACAGCCGCAGGTCCTGCGCGAAGATGCTACGGCCCTaGAGCTGGCCGGGGCTGCCACACTTCACACCATTAGCCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSRHSRRSCAKMLRP*SWPGLPHFTPLARP Trigger: TGGCCTGGCTAATGGTGTGAAGTGTGGCAGCCCCGGCCAGCTGCAGGGCCGTAGCATCTTCGCGCAGGACCTGCGGCTGTGCCTGGATGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 90 bp | ATCACCAACACCACCACGTCCTTGCGGTCTTCCAACAGGCGCTGCTaGGCCAGCAGGAAGCTGGTGCGCAGGAGGCCACTGACGCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ITNTTTSLRSSNRRC*ASRKLVRRRPLTRS Trigger: GGACCGCGTCAGTGGCCTCCTGCGCACCAGCTTCCTGCTGGCTCAGCAGCGCCTGTTGGAAGACCGCAAGGACGTGGTGGTGTTGGTGAT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 90 bp | AGCGGTGGGCATCCGGACGCAGGATCACCAACACCACCACGTCCTTaGGGTCTTCCAACAGGCGCTGCTGAGCCAGCAGGAAGCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGGHPDAGSPTPPRP*GLPTGAAEPAGSWC Trigger: GCACCAGCTTCCTGCTGGCTCAGCAGCGCCTGTTGGAAGACCGCAAGGACGTGGTGGTGTTGGTGATCCTGCGTCCGGATGCCCACCGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 90 bp | AGGGGGCTAAGGCCAGTGGGTGGACAGTTCCACTTGAGGTTCAGCTaGCGCAGGTTGGACAGGTGGACGAAGTCAGAGTTGTGCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RGLRPVGGQFHLRFS*RRLDRWTKSELCRW Trigger: CCACCTGCACAACTCTGACTTCGTCCACCTGTCCAACCTGCGGCAGCTGAACCTCAAGTGGAACTGTCCACCCACTGGCCTTAGCCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 90 bp | GGGCTGCCACACTTCACACCATTAGCCAGGCCAGGCACCTTGGTCTaGACCTCCAACAGTAAGTCTACGAAGGCTGCCCCACAGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GLPHFTPLARPGTLV*TSNSKSTKAAPQAQ Trigger: CTGTGCCTGTGGGGCAGCCTTCGTAGACTTACTGTTGGAGGTGCAGACCAAGGTGCCTGGCCTGGCTAATGGTGTGAAGTGTGGCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 90 bp | CTTCAGAGACAGATGGGTGAGATTGCTCAGGCCCAGGAGGGCGCCTaGGGTCACCTTCACCGCTCCTGTGCAGGGGTTCTTGTAGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LQRQMGEIAQAQEGA*GHLHRSCAGVLVVA Trigger: TGCTACTACAAGAACCCCTGCACAGGAGCGGTGAAGGTGACCCCAGGCGCCCTCCTGGGCCTGAGCAATCTCACCCATCTGTCTCTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 90 bp | CTCCTCCAGCCGCACCCGCAGCTCGTTATACACCCAGTCGGCAACTaGGCTCTGTGCCTTATCGAACACCACGAAGGCATCATAAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLQPHPQLVIHPVGN*ALCLIEHHEGIIRE Trigger: CTCCCTTATGATGCCTTCGTGGTGTTCGATAAGGCACAGAGCGCAGTTGCCGACTGGGTGTATAACGAGCTGCGGGTGCGGCTGGAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 90 bp | AGGAGGGTGCCATTAGGCAGGGTGCCATTGGTCAGGGCCTTTAGCTaGTTGCCTGCCAGGTCTAGGACTTCCAGGTTGGGTAGGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RRVPLGRVPLVRAFS*LPARSRTSRLGRKD Trigger: GTCCTTCCTACCCAACCTGGAAGTCCTAGACCTGGCAGGCAACCAGCTAAAGGCCCTGACCAATGGCACCCTGCCTAATGGCACCCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 90 bp | GGTCCGTGTGGGCCAGCACAAATAGAGTCTTGCGGCTCCCATAGATaGAAGCCCAGAGGTTCTCGAAGAGCGTCTGGCCAGGCAGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GPCGPAQIESCGSHR*KPRGSRRASGQAAN Trigger: ATTGGCTGCCTGGCCAGACGCTCTTCGAGAACCTCTGGGCTTCCATCTATGGGAGCCGCAAGACTCTATTTGTGCTGGCCCACACGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | AGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTCGGGAACCAGACATGCGAAGGGAGGTCAGATaGGCCAGGTCTTCAGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGVVRQSKAGRATREPDMRREVR*ARSSGP Trigger: GGGGCCTGAAGACCTGGCCAATCTGACCTCCCTTCG...CATGTCTGGTTCCCGAGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 90 bp | TGGAGAGAGCTGTCCTTCAGCACCAGGCCTTCCAGATGGCTCAGGTaGTGGAAGGTCTCAGGGTGCAGGTGGAGGGACTTTTGGCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: WRELSFSTRPSRWLR*WKVSGCRWRDFWPH Trigger: ATGTGGCCAAAAGTCCCTCCACCTGCACCCTGAGACCTTCCATCACCTGAGCCATCTGGAAGGCCTGGTGCTGAAGGACAGCTCTCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 90 bp | ATGGTGCAGTATAGGCACCACCATGCCCACGGCCACAGCCAAGAGTaGAAGGCCAAAGCAGTCCCAAGAGAGGACCTCATCCAGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: MVQYRHHHAHGHSQE*KAKAVPREDLIQAQ Trigger: CTGTGCCTGGATGAGGTCCTCTCTTGGGACTGCTTTGGCCTTTCACTCTTGGCTGTGGCCGTGGGCATGGTGGTGCCTATACTGCACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 90 bp | CTGCGTCGGCTGCGGGCTAGCAAAGGTAGCCATGCCAGGCACAGATaGAAACAGTACCAGACGTCCCAGCCGCAGAGATGGTGCAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: LRRLRASKGSHARHR*KQYQTSQPQRWCSI Trigger: TATACTGCACCATCTCTGCGGCTGGGACGTCTGGTACTGTTTTCATCTGTGCCTGGCATGGCTACCTTTGCTAGCCCGCAGCCGACGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 90 bp | AGGTTCAGCTGCCGCAGGTTGGACAGGTGGACGAAGTCAGAGTTGTaGAGGTGGTGGATACGGTTGGAGATCAAGGAGAGGCGGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RFSCRRLDRWTKSEL*RWWIRLEIKERRVM Trigger: CATCACCCGCCTCTCCTTGATCTCCAACCGTATCCACCACCTGCACAACTCTGACTTCGTCCACCTGTCCAACCTGCGGCAGCTGAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 90 bp | CCGCACCCGCAGCTCGTTATACACCCAGTCGGCAACTGCGCTCTGTaGCTTATCGAACACCACGAAGGCATCATAAGGGAGAGTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PHPQLVIHPVGNCAL*LIEHHEGIIRESLG Trigger: GCCCAAACTCTCCCTTATGATGCCTTCGTGGTGTTCGATAAGGCACAGAGCGCAGTTGCCGACTGGGTGTATAACGAGCTGCGGGTGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | GGTGGAGGGGCAGAGAATGAACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTAGCCAGGCCAGGCACCTaGGTCTGCACCTCCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: GGGAENELQSCSVWVWCLARPGT*VCTSNS Trigger: ACTGTTGGAGGTGCAGACCAAGGTGCCTGGCCTGGC...TAGACACCAAACCCACACAGAACAGGACTGGAGTTCATTCTCTGCCCCTCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS TCA 90 bp | AGTTGTGCAGGTGGTGGATACGGTTGGAGATCAAGGAGAGGCGGGTaGTGTTGGAGCAGGATGCTGCCGCAGAGAAACGGGGTACAGACT | + |
|
Preference number: 5 (lower is better) Translates to: SCAGGGYGWRSRRGG*CWSRMLPQRNGVQT Trigger: AGTCTGTACCCCGTTTCTCTGCGGCAGCATCCTGCTCCAACATCACCCGCCTCTCCTTGATCTCCAACCGTATCCACCACCTGCACAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS GCA 90 bp | ATGCTGCCGCAGAGAAACGGGGTACAGACTTCAGGAACAGCCAATTaGAGTCCACCAGGCCATGAGGCTTCAGCTCACAGGGTAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: MLPQRNGVQTSGTAN*SPPGHEASAHRVGR Trigger: CCTTCCTACCCTGTGAGCTGAAGCCTCATGGCCTGGTGGACTGCAATTGGCTGTTCCTGAAGTCTGTACCCCGTTTCTCTGCGGCAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CCA 90 bp | GGTGGACAGTTCCACTTGAGGTTCAGCTGCCGCAGGTTGGACAGGTaGACGAAGTCAGAGTTGTGCAGGTGGTGGATACGGTTGGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: GGQFHLRFSCRRLDR*TKSELCRWWIRLEI Trigger: GATCTCCAACCGTATCCACCACCTGCACAACTCTGACTTCGTCCACCTGTCCAACCTGCGGCAGCTGAACCTCAAGTGGAACTGTCCACC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CCA 90 bp | TCCAGTGTACGCATAGCCAGGAAGGTTCTGGGCTCAATGGTCATGTaGCAAGAGAAGTGCAGGGGGCTAAGGCCAGTGGGTGGACAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSVRIARKVLGSMVM*QEKCRGLRPVGGQF Trigger: GAACTGTCCACCCACTGGCCTTAGCCCCCTGCACTTCTCTTGCCACATGACCATTGAGCCCAGAACCTTCCTGGCTATGCGTACACTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 90 bp | ACACCTGTCCATGAAGTTCTTAGAAGCAGGGGTGCTCAGCGGAGCTaGGTGAGGATCCGCAGACAACAGCTCCTCCTGCTCTGCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: TPVHEVLRSRGAQRS*VRIRRQQLLLLCII Trigger: GATGATGCAGAGCAGGAGGAGCTGTTGTCTGCGGATCCTCACCCAGCTCCGCTGAGCACCCCTGCTTCTAAGAACTTCATGGACAGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 90 bp | ACGGTTGGAGATCAAGGAGAGGCGGGTGATGTTGGAGCAGGATGCTaGCGCAGAGAAACGGGGTACAGACTTCAGGAACAGCCAATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVGDQGEAGDVGAGC*RRETGYRLQEQPIA Trigger: TGCAATTGGCTGTTCCTGAAGTCTGTACCCCGTTTCTCTGCGGCAGCATCCTGCTCCAACATCACCCGCCTCTCCTTGATCTCCAACCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 90 bp | ATAGCCAGGAAGGTTCTGGGCTCAATGGTCATGTGGCAAGAGAAGTaGAGGGGGCTAAGGCCAGTGGGTGGACAGTTCCACTTGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IARKVLGSMVMWQEK*RGLRPVGGQFHLRF Trigger: GAACCTCAAGTGGAACTGTCCACCCACTGGCCTTAGCCCCCTGCACTTCTCTTGCCACATGACCATTGAGCCCAGAACCTTCCTGGCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 90 bp | CAGGGTGCAGGTGGAGGGACTTTTGGCCACATTCTATACAGGGATTaGGGGCATGGTCACAGCGACGGCAATTCCCACCCACATCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: QGAGGGTFGHILYRD*GHGHSDGNSHPHQV Trigger: TACTTGATGTGGGTGGGAATTGCCGTCGCTGTGACCATGCCCCCAATCCCTGTATAGAATGTGGCCAAAAGTCCCTCCACCTGCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 90 bp | GCTGGGACCACAGAGACGATACTGTTGCTACTGACATCGAGTTTCTaGAGGAGGGTGCCATTAGGCAGGGTGCCATTGGTCAGGGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGTTETILLLLTSSF*RRVPLGRVPLVRAF Trigger: AAAGGCCCTGACCAATGGCACCCTGCCTAATGGCACCCTCCTCCAGAAACTCGATGTCAGTAGCAACAGTATCGTCTCTGTGGTCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 90 bp | ACAATGGGCCCAAACCAGGAGCGATCCACCGTCTTGAGAATGTTGTaGCTGAGGTTGACCTCTTTCAGCTCGACCGCCAGAGCGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TMGPNQERSTVLRML*LRLTSFSSTARAKK Trigger: CTTCTTCGCTCTGGCGGTCGAGCTGAAAGAGGTCAACCTCAGCCACAACATTCTCAAGACGGTGGATCGCTCCTGGTTTGGGCCCATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | GCGCACTTGCCAAATAGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTAGGTGGTGGATACGGTaGGAGATCAAGGAGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AHLPNSGVVRQSKAGRATRWWIR*EIKERR Trigger: CCGCCTCTCCTTGATCTCCAACCGTATCCACCACCT...AGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCTATTTGGCAAGTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | AGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTCGGGAACCAGACATGAGCAGCTTCAGGCTCTaGGGGAGGTTGTCAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGVVRQSKAGRATREPDMSSFRL*GRLSRF Trigger: GAACCTTGACAACCTCCCCAAGAGCCTGAAGCTGCT...CATGTCTGGTTCCCGAGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 90 bp | TTATGGGACAGGTCCAGCACCTGCAGATTAGTCAGCGGCAGGAACTaGGAGCCATTGACAGCCTGTGCAATGGAGTTGTGGCTCAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LWDRSSTCRLVSGRN*EPLTACAMELWLRL Trigger: TAGCCTGAGCCACAACTCCATTGCACAGGCTGTCAATGGCTCTCAGTTCCTGCCGCTGACTAATCTGCAGGTGCTGGACCTGTCCCATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 90 bp | GATACGGTTGGAGATCAAGGAGAGGCGGGTGATGTTGGAGCAGGATaGTGCCGCAGAGAAACGGGGTACAGACTTCAGGAACAGCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: DTVGDQGEAGDVGAG*CRRETGYRLQEQPI Trigger: AATTGGCTGTTCCTGAAGTCTGTACCCCGTTTCTCTGCGGCAGCATCCTGCTCCAACATCACCCGCCTCTCCTTGATCTCCAACCGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | GCGCACTTGCCAAATAGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTTGGACGAAGTCAGAGTaGTGCAGGTGGTGGATACGG | + |
|
Preference number: 5 (lower is better) Translates to: AHLPNSGVVRQSKAGRATWTKSE*CRWWIR Trigger: CCGTATCCACCACCTGCACAACTCTGACTTCGTCCA...AGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCTATTTGGCAAGTGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | TCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCGACAGATGGGTGAGATaGCTCAGGCCCAGGAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSPVLCGFGVYLHSPERCDRWVR*LRPRRA Trigger: CGCCCTCCTGGGCCTGAGCAATCTCACCCATCTGTC...GCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | AGCGGTGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTCGGGAACCAGACATGGCACAGTGCAGAGGGTaGCTTCTCACGTCTAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SGVVRQSKAGRATREPDMAQCRG*LLTSRT Trigger: AGTTCTAGACGTGAGAAGCAACCCTCTGCACTGTGC...CATGTCTGGTTCCCGAGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACACCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 90 bp | GTTGAGCAAGCGGAAGAAGATGCCGTTCATGTTCAGCTCCTGCAGTaGCACCAGGTTCTTAAAGGAACTTGCCAGGTGGAGGCGGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VEQAEEDAVHVQLLQ*HQVLKGTCQVEAGK Trigger: TTTGCCCGCCTCCACCTGGCAAGTTCCTTTAAGAACCTGGTGTCACTGCAGGAGCTGAACATGAACGGCATCTTCTTCCGCTTGCTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 90 bp | ACAGTAAGTCTACGAAGGCTGCCCCACAGGCACAGTGCAGAGGGTTaGTTCTCACGTCTAGAACTGTCAGGTTCATCACAATGGGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TVSLRRLPHRHSAEG*FSRLELSGSSQWAQ Trigger: TTGGGCCCATTGTGATGAACCTGACAGTTCTAGACGTGAGAAGCAACCCTCTGCACTGTGCCTGTGGGGCAGCCTTCGTAGACTTACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 90 bp | TGCACCTCCAACAGTAAGTCTACGAAGGCTGCCCCACAGGCACAGTaGAGAGGGTTGCTTCTCACGTCTAGAACTGTCAGGTTCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: CTSNSKSTKAAPQAQ*RGLLLTSRTVRFIT Trigger: TGTGATGAACCTGACAGTTCTAGACGTGAGAAGCAACCCTCTGCACTGTGCCTGTGGGGCAGCCTTCGTAGACTTACTGTTGGAGGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 90 bp | AGGTCCAGGGCCTGCAACTGTGGTAGCTCACTGAACGATTTCCAGTaGTACAAGTCCAGTTTGTTATGGGACAGGTCCAGCACCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSRACNCGSSLNDFQ*YKSSLLWDRSSTCR Trigger: TCTGCAGGTGCTGGACCTGTCCCATAACAAACTGGACTTGTACCACTGGAAATCGTTCAGTGAGCTACCACAGTTGCAGGCCCTGGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | ACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATAGGCTCTTGGGGAGGTaGTCAAGGTTCTGGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TPVLFCVGLVSIFTLLKDRLLGR*SRFWGR Trigger: CCGGCCCCAGAACCTTGACAACCTCCCCAAGAGCCT...ATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACTGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 90 bp | GGCTGTTGTAGCTCAGGTCCAGGGCCTGCAACTGTGGTAGCTCACTaGACGATTTCCAGTGGTACAAGTCCAGTTTGTTATGGGACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GCCSSGPGPATVVAH*TISSGTSPVCYGTG Trigger: ACCTGTCCCATAACAAACTGGACTTGTACCACTGGAAATCGTTCAGTGAGCTACCACAGTTGCAGGCCCTGGACCTGAGCTACAACAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 90 bp | AGAAAGTTCTCGCTTAGGTCCAGCACCGAGAGGTTGACCAGACCTTaGAACCAGGAAGAGTTCAGTGTATGGAGAGAGCTGTCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RKFSLRSSTERLTRP*NQEEFSVWRELSFS Trigger: GCTGAAGGACAGCTCTCTCCATACACTGAACTCTTCCTGGTTCCAAGGTCTGGTCAACCTCTCGGTGCTGGACCTAAGCGAGAACTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | ACTCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGGTGGACAGTTCCACTaGAGGTTCAGCTGCCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TPVLFCVGLVSIFTLLKDGGQFH*RFSCRR Trigger: CCTGCGGCAGCTGAACCTCAAGTGGAACTGTCCACC...ATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACTGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 90 bp | CCATTGACAGCCTGTGCAATGGAGTTGTGGCTCAGGCTAAGACACTaGAGGCGTGAGAGATTGACAAACATCTCTGGCTTGATAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: PLTACAMELWLRLRH*RRERLTNISGLIVT Trigger: GGTGACTATCAAGCCAGAGATGTTTGTCAATCTCTCACGCCTCCAGTGTCTTAGCCTGAGCCACAACTCCATTGCACAGGCTGTCAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | AGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGAAGGACAGGTTGAGCTaGCGCAGGCGGGTTAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPVLCGFGVYLHSPERCMKDRLS*RRRVRF Trigger: GAACCTAACCCGCCTGCGCAAGCTCAACCTGTCCTT...CATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | GTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGGGAAGATGCAGAGTGTGGAGTTaGGGCAGATCGGCCAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLCGFGVYLHSPERCMGRCRVWS*GRSASH Trigger: ATGGCTGGCCGATCTGCCCAAACTCCACACTCTGCA...TCTTCCCATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | GCAGGCAGAGCAACTCGGGAACCAGACATGAAGATGCAGCTGTTTCCAGCTGTTAGAAACCTCACTGAGTaGCTGTTGAGATGTGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AGRATREPDMKMQLFPAVRNLTE*LLRCED Trigger: GTCCTCACATCTCAACAGCAACTCAGTGAGGTTTCT...AACAGCTGGAAACAGCTGCATCTTCATGTCTGGTTCCCGAGTTGCTCTGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | TCTCCTGAAAGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCAGGGCCTTTAGCTGGTaGCCTGCCAGGTCTAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SPERCMGRKLPFTANLCSRAFSW*PARSRT Trigger: AGTCCTAGACCTGGCAGGCAACCAGCTAAAGGCCCT...GGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCTTTCAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | AGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGTTAGGCAGGGTGCCATaGGTCAGGGCCTTTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SPVLCGFGVYLHSPERCMLGRVP*VRAFSW Trigger: CCAGCTAAAGGCCCTGACCAATGGCACCCTGCCTAA...CATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 90 bp | TGCTTTCATAGAGAAAGTTCTCGCTTAGGTCCAGCACCGAGAGGTTaGCCAGACCTTGGAACCAGGAAGAGTTCAGTGTATGGAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CFHRESSRLGPAPRG*PDLGTRKSSVYGES Trigger: GCTCTCTCCATACACTGAACTCTTCCTGGTTCCAAGGTCTGGTCAACCTCTCGGTGCTGGACCTAAGCGAGAACTTTCTCTATGAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 90 bp | AAGGTACCAAAGATGCTGAGCTGTGCCTGGTTGATGAAGTTCATTTaGAGATGCAGAGTGTGGAGTTTGGGCAGATCGGCCAGCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: KVPKMLSCAWLMKFI*RCRVWSLGRSASHL Trigger: CAGATGGCTGGCCGATCTGCCCAAACTCCACACTCTGCATCTTCAAATGAACTTCATCAACCAGGCACAGCTCAGCATCTTTGGTACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 90 bp | AGCCTGTGCAATGGAGTTGTGGCTCAGGCTAAGACACTGGAGGCGTaGGAGATTGACAAACATCTCTGGCTTGATAGTCACCAGGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLCNGVVAQAKTLEA*EIDKHLWLDSHQVV Trigger: AACAACCTGGTGACTATCAAGCCAGAGATGTTTGTCAATCTCTCACGCCTCCAGTGTCTTAGCCTGAGCCACAACTCCATTGCACAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | TCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCGAGGTTGACCAGACCTaGGAACCAGGAAGAGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSPVLCGFGVYLHSPERCEVDQT*EPGRVQ Trigger: CTGAACTCTTCCTGGTTCCAAGGTCTGGTCAACCTC...GCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | GCAGGCAGAGCAACTCGGGAACCAGACATGAAGATGCAGCTGTTTCCAGCTGTTGATATGCAGGTTATTTaGAGACAGGTCCAGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGRATREPDMKMQLFPAVDMQVI*RQVQLQ Trigger: CTGAAGCTGGACCTGTCTCAAAATAACCTGCATATC...AACAGCTGGAAACAGCTGCATCTTCATGTCTGGTTCCCGAGTTGCTCTGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 90 bp | GTCCACAAAGCGAAGGGCTCGGAAGGTACCAAAGATGCTGAGCTGTaGCTGGTTGATGAAGTTCATTTGAAGATGCAGAGTGTGGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VHKAKGSEGTKDAEL*LVDEVHLKMQSVEF Trigger: AAACTCCACACTCTGCATCTTCAAATGAACTTCATCAACCAGGCACAGCTCAGCATCTTTGGTACCTTCCGAGCCCTTCGCTTTGTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | TCTCCTGAAAGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCTCTAGAACCAGGATGTaGGTGTGGCTCAGGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPERCMGRKLPFTANLCSSRTRM*VWLRLR Trigger: TCTGAGCCTGAGCCACACCAACATCCTGGTTCTAGA...GGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCTTTCAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | AGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGCTCACTGAGTTGCTGTaGAGATGTGAGGACACACGG | + |
|
Preference number: 5 (lower is better) Translates to: SPVLCGFGVYLHSPERCMLTELL*RCEDTR Trigger: CCGTGTGTCCTCACATCTCAACAGCAACTCAGTGAG...CATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | TCCAGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCCAGGCCACTCAGGCCTaGGAAGAAATGGAGATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSPVLCGFGVYLHSPERCQATQA*EEMEIK Trigger: CTTTATCTCCATTTCTTCCAAGGCCTGAGTGGCCTG...GCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | TGTAGTAAGACAGAGCAAGGCAGGCAGAGCAACTCGGGAACCAGACATGAAGATGGCACCTTTGTGAGGTaGTTATACTTCAGAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: CSKTEQGRQSNSGTRHEDGTFVR*LYFRDR Trigger: TCTGTCTCTGAAGTATAACAACCTCACAAAGGTGCC...ATCTTCATGTCTGGTTCCCGAGTTGCTCTGCCTGCCTTGCTCTGTCTTACTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | GTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGGGAAGACATCTGAGCGTGTACTaGTTGAGCAAGCGGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLCGFGVYLHSPERCMGRHLSVY*LSKRKK Trigger: CTTCTTCCGCTTGCTCAACAAGTACACGCTCAGATG...TCTTCCCATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | TCTCCTGAAAGATGCATGGGAAGAAAACTACCCTTTACAGCCAACCTTTGCTCCACCGTCTTGAGAATGTaGTGGCTGAGGTTGACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPERCMGRKLPFTANLCSTVLRM*WLRLTS Trigger: AGAGGTCAACCTCAGCCACAACATTCTCAAGACGGT...GGAGCAAAGGTTGGCTGTAAAGGGTAGTTTTCTTCCCATGCATCTTTCAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS-3UTR CAA 90 bp | AGTCCTGTTCTGTGTGGGTTTGGTGTCTATCTTCACTCTCCTGAAAGATGCATGGTTGATGAAGTTCATTaGAAGATGCAGAGTGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPVLCGFGVYLHSPERCMVDEVH*KMQSVE Trigger: CTCCACACTCTGCATCTTCAAATGAACTTCATCAAC...CATGCATCTTTCAGGAGAGTGAAGATAGACACCAAACCCACACAGAACAGGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 72 bp | CAAGAGAGGACCTCATCCAGGCACAGCCGCAGGTCCTaGGCGAAGATGCTACGGCCCTGCAGCTGGCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QERTSSRHSRRS*AKMLRPCSWPG Trigger: CCCCGGCCAGCTGCAGGGCCGTAGCATCTTCGCGCAGGACCTGCGGCTGTGCCTGGATGAGGTCCTCTCTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 72 bp | CGCAGGTCCTGCGCGAAGATGCTACGGCCCTGCAGCTaGCCGGGGCTGCCACACTTCACACCATTAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRSCAKMLRPCS*PGLPHFTPLAR Trigger: CCTGGCTAATGGTGTGAAGTGTGGCAGCCCCGGCCAGCTGCAGGGCCGTAGCATCTTCGCGCAGGACCTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 72 bp | ACCACCACGTCCTTGCGGTCTTCCAACAGGCGCTGCTaGGCCAGCAGGAAGCTGGTGCGCAGGAGGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: TTTSLRSSNRRC*ASRKLVRRRPL Trigger: CAGTGGCCTCCTGCGCACCAGCTTCCTGCTGGCTCAGCAGCGCCTGTTGGAAGACCGCAAGGACGTGGTGGT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS GCA 72 bp | CACAGCCGCAGGTCCTGCGCGAAGATGCTACGGCCCTaGAGCTGGCCGGGGCTGCCACACTTCACACCATTA | + |
|
Preference number: 6 (lower is better) Translates to: HSRRSCAKMLRP*SWPGLPHFTPL Trigger: TAATGGTGTGAAGTGTGGCAGCCCCGGCCAGCTGCAGGGCCGTAGCATCTTCGCGCAGGACCTGCGGCTGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 72 bp | CAGATGGGTGAGATTGCTCAGGCCCAGGAGGGCGCCTaGGGTCACCTTCACCGCTCCTGTGCAGGGGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QMGEIAQAQEGA*GHLHRSCAGVL Trigger: AAGAACCCCTGCACAGGAGCGGTGAAGGTGACCCCAGGCGCCCTCCTGGGCCTGAGCAATCTCACCCATCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS GCA 72 bp | CATCCGGACGCAGGATCACCAACACCACCACGTCCTTaGGGTCTTCCAACAGGCGCTGCTGAGCCAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HPDAGSPTPPRP*GLPTGAAEPAG Trigger: TCCTGCTGGCTCAGCAGCGCCTGTTGGAAGACCGCAAGGACGTGGTGGTGTTGGTGATCCTGCGTCCGGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 72 bp | CTGTGCAGGGGTTCTTGTAGTAGCAGTTCCCGTCCATaGAGAGAACGCGCAGGCTGTATAGGCCGGCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LCRGSCSSSSRP*RERAGCIGRRG Trigger: GCCTCGCCGGCCTATACAGCCTGCGCGTTCTCTTCATGGACGGGAACTGCTACTACAAGAACCCCTGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 72 bp | CCGCACCCGCAGCTCGTTATACACCCAGTCGGCAACTaGGCTCTGTGCCTTATCGAACACCACGAAGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PHPQLVIHPVGN*ALCLIEHHEGI Trigger: GATGCCTTCGTGGTGTTCGATAAGGCACAGAGCGCAGTTGCCGACTGGGTGTATAACGAGCTGCGGGTGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CCA 72 bp | GTGGCAAGAGAAGTGCAGGGGGCTAAGGCCAGTGGGTaGACAGTTCCACTTGAGGTTCAGCTGCCGCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VAREVQGAKASG*TVPLEVQLPQV Trigger: AACCTGCGGCAGCTGAACCTCAAGTGGAACTGTCCACCCACTGGCCTTAGCCCCCTGCACTTCTCTTGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 90 bp | AGGCTGTATAGGCCGGCGAGGCTGTTAGCATCTAGAACCAGGATGTaGGTGTGGCTCAGGCTCAGATTCACCAGGGAGCTGGGCAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RLYRPARLLASRTRM*VWLRLRFTRELGSR Trigger: CCGACTGCCCAGCTCCCTGGTGAATCTGAGCCTGAGCCACACCAACATCCTGGTTCTAGATGCTAACAGCCTCGCCGGCCTATACAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 90 bp | TGCAGGTGGTGGATACGGTTGGAGATCAAGGAGAGGCGGGTGATGTaGGAGCAGGATGCTGCCGCAGAGAAACGGGGTACAGACTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CRWWIRLEIKERRVM*EQDAAAEKRGTDFR Trigger: CCTGAAGTCTGTACCCCGTTTCTCTGCGGCAGCATCCTGCTCCAACATCACCCGCCTCTCCTTGATCTCCAACCGTATCCACCACCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 90 bp | TTGAGGTTCAGCTGCCGCAGGTTGGACAGGTGGACGAAGTCAGAGTaGTGCAGGTGGTGGATACGGTTGGAGATCAAGGAGAGGCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LRFSCRRLDRWTKSE*CRWWIRLEIKERRV Trigger: CACCCGCCTCTCCTTGATCTCCAACCGTATCCACCACCTGCACAACTCTGACTTCGTCCACCTGTCCAACCTGCGGCAGCTGAACCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 90 bp | AGGGTGCCATTAGGCAGGGTGCCATTGGTCAGGGCCTTTAGCTGGTaGCCTGCCAGGTCTAGGACTTCCAGGTTGGGTAGGAAGGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: RVPLGRVPLVRAFSW*PARSRTSRLGRKDR Trigger: TCTGTCCTTCCTACCCAACCTGGAAGTCCTAGACCTGGCAGGCAACCAGCTAAAGGCCCTGACCAATGGCACCCTGCCTAATGGCACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 90 bp | CTGACATCGAGTTTCTGGAGGAGGGTGCCATTAGGCAGGGTGCCATaGGTCAGGGCCTTTAGCTGGTTGCCTGCCAGGTCTAGGACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LTSSFWRRVPLGRVP*VRAFSWLPARSRTS Trigger: GGAAGTCCTAGACCTGGCAGGCAACCAGCTAAAGGCCCTGACCAATGGCACCCTGCCTAATGGCACCCTCCTCCAGAAACTCGATGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 90 bp | CCAAACCAGGAGCGATCCACCGTCTTGAGAATGTTGTGGCTGAGGTaGACCTCTTTCAGCTCGACCGCCAGAGCGAAGAAGGCTGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: PNQERSTVLRMLWLR*TSFSSTARAKKAGT Trigger: GGTCCCAGCCTTCTTCGCTCTGGCGGTCGAGCTGAAAGAGGTCAACCTCAGCCACAACATTCTCAAGACGGTGGATCGCTCCTGGTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS TCA 72 bp | AAGTTCTTAGAAGCAGGGGTGCTCAGCGGAGCTGGGTaGGGATCCGCAGACAACAGCTCCTCCTGCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: KFLEAGVLSGAG*GSADNSSSCSA Trigger: TGCAGAGCAGGAGGAGCTGTTGTCTGCGGATCCTCACCCAGCTCCGCTGAGCACCCCTGCTTCTAAGAACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS TCA 72 bp | CTGCGGGCTAGCAAAGGTAGCCATGCCAGGCACAGATaGAAACAGTACCAGACGTCCCAGCCGCAGAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: LRASKGSHARHR*KQYQTSQPQRW Trigger: CCATCTCTGCGGCTGGGACGTCTGGTACTGTTTTCATCTGTGCCTGGCATGGCTACCTTTGCTAGCCCGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS GCA 72 bp | AGGCCAGTGGGTGGACAGTTCCACTTGAGGTTCAGCTaGCGCAGGTTGGACAGGTGGACGAAGTCAGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RPVGGQFHLRFS*RRLDRWTKSEL Trigger: CAACTCTGACTTCGTCCACCTGTCCAACCTGCGGCAGCTGAACCTCAAGTGGAACTGTCCACCCACTGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CCA 72 bp | CGCATAGCCAGGAAGGTTCTGGGCTCAATGGTCATGTaGCAAGAGAAGTGCAGGGGGCTAAGGCCAGTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RIARKVLGSMVM*QEKCRGLRPVG Trigger: ACCCACTGGCCTTAGCCCCCTGCACTTCTCTTGCCACATGACCATTGAGCCCAGAACCTTCCTGGCTATGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CCA 72 bp | GGTAGTTGTCTCGGAGGCTCAGCAGCTTCAGGCTCTTaGGGAGGTTGTCAAGGTTCTGGGGCCGGAGGATAT | + |
|
Preference number: 6 (lower is better) Translates to: GSCLGGSAASGS*GGCQGSGAGGY Trigger: ATATCCTCCGGCCCCAGAACCTTGACAACCTCCCCAAGAGCCTGAAGCTGCTGAGCCTCCGAGACAACTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CCA 72 bp | CCATTAGGCAGGGTGCCATTGGTCAGGGCCTTTAGCTaGTTGCCTGCCAGGTCTAGGACTTCCAGGTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PLGRVPLVRAFS*LPARSRTSRLG Trigger: ACCCAACCTGGAAGTCCTAGACCTGGCAGGCAACCAGCTAAAGGCCCTGACCAATGGCACCCTGCCTAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CCA 72 bp | GGGCCAGCACAAATAGAGTCTTGCGGCTCCCATAGATaGAAGCCCAGAGGTTCTCGAAGAGCGTCTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPAQIESCGSHR*KPRGSRRASGQ Trigger: CTGGCCAGACGCTCTTCGAGAACCTCTGGGCTTCCATCTATGGGAGCCGCAAGACTCTATTTGTGCTGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 72 bp | GGTGGACAGTTCCACTTGAGGTTCAGCTGCCGCAGGTaGGACAGGTGGACGAAGTCAGAGTTGTGCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGQFHLRFSCRR*DRWTKSELCRW Trigger: CCACCTGCACAACTCTGACTTCGTCCACCTGTCCAACCTGCGGCAGCTGAACCTCAAGTGGAACTGTCCACC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 72 bp | AGGCCGGCGAGGCTGTTAGCATCTAGAACCAGGATGTaGGTGTGGCTCAGGCTCAGATTCACCAGGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RPARLLASRTRM*VWLRLRFTREL Trigger: CAGCTCCCTGGTGAATCTGAGCCTGAGCCACACCAACATCCTGGTTCTAGATGCTAACAGCCTCGCCGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 72 bp | TCTCGGAGGCTCAGCAGCTTCAGGCTCTTGGGGAGGTaGTCAAGGTTCTGGGGCCGGAGGATATGCAGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SRRLSSFRLLGR*SRFWGRRICRL Trigger: TAACCTGCATATCCTCCGGCCCCAGAACCTTGACAACCTCCCCAAGAGCCTGAAGCTGCTGAGCCTCCGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 72 bp | AGTTTCTGGAGGAGGGTGCCATTAGGCAGGGTGCCATaGGTCAGGGCCTTTAGCTGGTTGCCTGCCAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SFWRRVPLGRVP*VRAFSWLPARS Trigger: AGACCTGGCAGGCAACCAGCTAAAGGCCCTGACCAATGGCACCCTGCCTAATGGCACCCTCCTCCAGAAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 90 bp | ATGGCTCAGGTGATGGAAGGTCTCAGGGTGCAGGTGGAGGGACTTTaGGCCACATTCTATACAGGGATTGGGGGCATGGTCACAGCGACG | + |
|
Preference number: 6 (lower is better) Translates to: MAQVMEGLRVQVEGL*ATFYTGIGGMVTAT Trigger: CGTCGCTGTGACCATGCCCCCAATCCCTGTATAGAATGTGGCCAAAAGTCCCTCCACCTGCACCCTGAGACCTTCCATCACCTGAGCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS TCA 72 bp | TATAGGCACCACCATGCCCACGGCCACAGCCAAGAGTaGAAGGCCAAAGCAGTCCCAAGAGAGGACCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: YRHHHAHGHSQE*KAKAVPREDLI Trigger: GATGAGGTCCTCTCTTGGGACTGCTTTGGCCTTTCACTCTTGGCTGTGGCCGTGGGCATGGTGGTGCCTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS GCA 72 bp | GATCAAGGAGAGGCGGGTGATGTTGGAGCAGGATGCTaGCGCAGAGAAACGGGGTACAGACTTCAGGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: DQGEAGDVGAGC*RRETGYRLQEQ Trigger: CTGTTCCTGAAGTCTGTACCCCGTTTCTCTGCGGCAGCATCCTGCTCCAACATCACCCGCCTCTCCTTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS GCA 72 bp | GGAGATCAAGGAGAGGCGGGTGATGTTGGAGCAGGATaGTGCCGCAGAGAAACGGGGTACAGACTTCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GDQGEAGDVGAG*CRRETGYRLQE Trigger: TTCCTGAAGTCTGTACCCCGTTTCTCTGCGGCAGCATCCTGCTCCAACATCACCCGCCTCTCCTTGATCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS GCA 72 bp | TGCCGCAGGTTGGACAGGTGGACGAAGTCAGAGTTGTaGAGGTGGTGGATACGGTTGGAGATCAAGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CRRLDRWTKSEL*RWWIRLEIKER Trigger: CCTCTCCTTGATCTCCAACCGTATCCACCACCTGCACAACTCTGACTTCGTCCACCTGTCCAACCTGCGGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS GCA 72 bp | AAGGTTCTGGGCTCAATGGTCATGTGGCAAGAGAAGTaGAGGGGGCTAAGGCCAGTGGGTGGACAGTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: KVLGSMVMWQEK*RGLRPVGGQFH Trigger: GTGGAACTGTCCACCCACTGGCCTTAGCCCCCTGCACTTCTCTTGCCACATGACCATTGAGCCCAGAACCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CCA 72 bp | AGGTTGGACAGGTGGACGAAGTCAGAGTTGTGCAGGTaGTGGATACGGTTGGAGATCAAGGAGAGGCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLDRWTKSELCR*WIRLEIKERRV Trigger: CACCCGCCTCTCCTTGATCTCCAACCGTATCCACCACCTGCACAACTCTGACTTCGTCCACCTGTCCAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CCA 72 bp | GCGAGGCTGTTAGCATCTAGAACCAGGATGTTGGTGTaGCTCAGGCTCAGATTCACCAGGGAGCTGGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ARLLASRTRMLV*LRLRFTRELGS Trigger: ACTGCCCAGCTCCCTGGTGAATCTGAGCCTGAGCCACACCAACATCCTGGTTCTAGATGCTAACAGCCTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CCA 72 bp | GGTGGAGGGACTTTTGGCCACATTCTATACAGGGATTaGGGGCATGGTCACAGCGACGGCAATTCCCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: GGGTFGHILYRD*GHGHSDGNSHP Trigger: TGGGTGGGAATTGCCGTCGCTGTGACCATGCCCCCAATCCCTGTATAGAATGTGGCCAAAAGTCCCTCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CAA 72 bp | TGGATACGGTTGGAGATCAAGGAGAGGCGGGTGATGTaGGAGCAGGATGCTGCCGCAGAGAAACGGGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: WIRLEIKERRVM*EQDAAAEKRGT Trigger: TGTACCCCGTTTCTCTGCGGCAGCATCCTGCTCCAACATCACCCGCCTCTCCTTGATCTCCAACCGTATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 72 bp | AGCTGCCGCAGGTTGGACAGGTGGACGAAGTCAGAGTaGTGCAGGTGGTGGATACGGTTGGAGATCAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SCRRLDRWTKSE*CRWWIRLEIKE Trigger: CTCCTTGATCTCCAACCGTATCCACCACCTGCACAACTCTGACTTCGTCCACCTGTCCAACCTGCGGCAGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CAA 72 bp | GTCAAGGTTCTGGGGCCGGAGGATATGCAGGTTATTTaGAGACAGGTCCAGCTTCAGCAGGCCACTCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VKVLGPEDMQVI*RQVQLQQATQA Trigger: GGCCTGAGTGGCCTGCTGAAGCTGGACCTGTCTCAAAATAACCTGCATATCCTCCGGCCCCAGAACCTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 90 bp | TCAGGGTGCAGGTGGAGGGACTTTTGGCCACATTCTATACAGGGATaGGGGGCATGGTCACAGCGACGGCAATTCCCACCCACATCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SGCRWRDFWPHSIQG*GAWSQRRQFPPTSS Trigger: ACTTGATGTGGGTGGGAATTGCCGTCGCTGTGACCATGCCCCCAATCCCTGTATAGAATGTGGCCAAAAGTCCCTCCACCTGCACCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 90 bp | ATCACAATGGGCCCAAACCAGGAGCGATCCACCGTCTTGAGAATGTaGTGGCTGAGGTTGACCTCTTTCAGCTCGACCGCCAGAGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ITMGPNQERSTVLRM*WLRLTSFSSTARAK Trigger: CTTCGCTCTGGCGGTCGAGCTGAAAGAGGTCAACCTCAGCCACAACATTCTCAAGACGGTGGATCGCTCCTGGTTTGGGCCCATTGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 90 bp | GTCAGGTTCATCACAATGGGCCCAAACCAGGAGCGATCCACCGTCTaGAGAATGTTGTGGCTGAGGTTGACCTCTTTCAGCTCGACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRFITMGPNQERSTV*RMLWLRLTSFSSTA Trigger: GGCGGTCGAGCTGAAAGAGGTCAACCTCAGCCACAACATTCTCAAGACGGTGGATCGCTCCTGGTTTGGGCCCATTGTGATGAACCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS TCA 72 bp | AGGTCCAGCACCTGCAGATTAGTCAGCGGCAGGAACTaGGAGCCATTGACAGCCTGTGCAATGGAGTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSSTCRLVSGRN*EPLTACAMELW Trigger: CCACAACTCCATTGCACAGGCTGTCAATGGCTCTCAGTTCCTGCCGCTGACTAATCTGCAGGTGCTGGACCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS TCA 72 bp | TCAAGGTTCTGGGGCCGGAGGATATGCAGGTTATTTTaGGACAGGTCCAGCTTCAGCAGGCCACTCAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRFWGRRICRLF*DRSSFSRPLRP Trigger: AGGCCTGAGTGGCCTGCTGAAGCTGGACCTGTCTCAAAATAACCTGCATATCCTCCGGCCCCAGAACCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS GCA 72 bp | CAGAGAAACGGGGTACAGACTTCAGGAACAGCCAATTaGAGTCCACCAGGCCATGAGGCTTCAGCTCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: QRNGVQTSGTAN*SPPGHEASAHR Trigger: CCTGTGAGCTGAAGCCTCATGGCCTGGTGGACTGCAATTGGCTGTTCCTGAAGTCTGTACCCCGTTTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CCA 72 bp | TTGGACAGGTGGACGAAGTCAGAGTTGTGCAGGTGGTaGATACGGTTGGAGATCAAGGAGAGGCGGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LDRWTKSELCRW*IRLEIKERRVM Trigger: CATCACCCGCCTCTCCTTGATCTCCAACCGTATCCACCACCTGCACAACTCTGACTTCGTCCACCTGTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CCA 72 bp | CCAAACCAGGAGCGATCCACCGTCTTGAGAATGTTGTaGCTGAGGTTGACCTCTTTCAGCTCGACCGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PNQERSTVLRML*LRLTSFSSTAR Trigger: TCTGGCGGTCGAGCTGAAAGAGGTCAACCTCAGCCACAACATTCTCAAGACGGTGGATCGCTCCTGGTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 72 bp | GTGATGGAAGGTCTCAGGGTGCAGGTGGAGGGACTTTaGGCCACATTCTATACAGGGATTGGGGGCATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VMEGLRVQVEGL*ATFYTGIGGMV Trigger: GACCATGCCCCCAATCCCTGTATAGAATGTGGCCAAAAGTCCCTCCACCTGCACCCTGAGACCTTCCATCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 72 bp | GAGCGATCCACCGTCTTGAGAATGTTGTGGCTGAGGTaGACCTCTTTCAGCTCGACCGCCAGAGCGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ERSTVLRMLWLR*TSFSSTARAKK Trigger: CTTCTTCGCTCTGGCGGTCGAGCTGAAAGAGGTCAACCTCAGCCACAACATTCTCAAGACGGTGGATCGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 90 bp | GTGTGGAGTTTGGGCAGATCGGCCAGCCATCTGAGCGTGTACTTGTaGAGCAAGCGGAAGAAGATGCCGTTCATGTTCAGCTCCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VWSLGRSASHLSVYL*SKRKKMPFMFSSCS Trigger: ACTGCAGGAGCTGAACATGAACGGCATCTTCTTCCGCTTGCTCAACAAGTACACGCTCAGATGGCTGGCCGATCTGCCCAAACTCCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 90 bp | AGAGTGTGGAGTTTGGGCAGATCGGCCAGCCATCTGAGCGTGTACTaGTTGAGCAAGCGGAAGAAGATGCCGTTCATGTTCAGCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RVWSLGRSASHLSVY*LSKRKKMPFMFSSC Trigger: GCAGGAGCTGAACATGAACGGCATCTTCTTCCGCTTGCTCAACAAGTACACGCTCAGATGGCTGGCCGATCTGCCCAAACTCCACACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS GCA 72 bp | CTACGAAGGCTGCCCCACAGGCACAGTGCAGAGGGTTaGTTCTCACGTCTAGAACTGTCAGGTTCATCACAA | + |
|
Preference number: 6 (lower is better) Translates to: LRRLPHRHSAEG*FSRLELSGSSQ Trigger: TTGTGATGAACCTGACAGTTCTAGACGTGAGAAGCAACCCTCTGCACTGTGCCTGTGGGGCAGCCTTCGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS GCA 72 bp | AACAGTAAGTCTACGAAGGCTGCCCCACAGGCACAGTaGAGAGGGTTGCTTCTCACGTCTAGAACTGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: NSKSTKAAPQAQ*RGLLLTSRTVR Trigger: CCTGACAGTTCTAGACGTGAGAAGCAACCCTCTGCACTGTGCCTGTGGGGCAGCCTTCGTAGACTTACTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS GCA 72 bp | CAGCTCGTTATACACCCAGTCGGCAACTGCGCTCTGTaGCTTATCGAACACCACGAAGGCATCATAAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QLVIHPVGNCAL*LIEHHEGIIRE Trigger: CTCCCTTATGATGCCTTCGTGGTGTTCGATAAGGCACAGAGCGCAGTTGCCGACTGGGTGTATAACGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 72 bp | TTGGGCAGATCGGCCAGCCATCTGAGCGTGTACTTGTaGAGCAAGCGGAAGAAGATGCCGTTCATGTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LGRSASHLSVYL*SKRKKMPFMFS Trigger: GCTGAACATGAACGGCATCTTCTTCCGCTTGCTCAACAAGTACACGCTCAGATGGCTGGCCGATCTGCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 72 bp | TCTACGAAGGCTGCCCCACAGGCACAGTGCAGAGGGTaGCTTCTCACGTCTAGAACTGTCAGGTTCATCACA | + |
|
Preference number: 6 (lower is better) Translates to: STKAAPQAQCRG*LLTSRTVRFIT Trigger: TGTGATGAACCTGACAGTTCTAGACGTGAGAAGCAACCCTCTGCACTGTGCCTGTGGGGCAGCCTTCGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CAA 90 bp | AACAGTAAGTCTACGAAGGCTGCCCCACAGGCACAGTGCAGAGGGTaGCTTCTCACGTCTAGAACTGTCAGGTTCATCACAATGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: NSKSTKAAPQAQCRG*LLTSRTVRFITMGP Trigger: TGGGCCCATTGTGATGAACCTGACAGTTCTAGACGTGAGAAGCAACCCTCTGCACTGTGCCTGTGGGGCAGCCTTCGTAGACTTACTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS TCA 72 bp | GCGGAAGAAGATGCCGTTCATGTTCAGCTCCTGCAGTaGCACCAGGTTCTTAAAGGAACTTGCCAGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AEEDAVHVQLLQ*HQVLKGTCQVE Trigger: CTCCACCTGGCAAGTTCCTTTAAGAACCTGGTGTCACTGCAGGAGCTGAACATGAACGGCATCTTCTTCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
||
| CDS CCA 72 bp | GACTTTTGGCCACATTCTATACAGGGATTGGGGGCATaGTCACAGCGACGGCAATTCCCACCCACATCAAGT | + |
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Preference number: 6 (lower is better) Translates to: DFWPHSIQGLGA*SQRRQFPPTSS Trigger: ACTTGATGTGGGTGGGAATTGCCGTCGCTGTGACCATGCCCCCAATCCCTGTATAGAATGTGGCCAAAAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 72 bp | GCCTGTGCAATGGAGTTGTGGCTCAGGCTAAGACACTaGAGGCGTGAGAGATTGACAAACATCTCTGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: ACAMELWLRLRH*RRERLTNISGL Trigger: CAAGCCAGAGATGTTTGTCAATCTCTCACGCCTCCAGTGTCTTAGCCTGAGCCACAACTCCATTGCACAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 72 bp | ACAGAGACGATACTGTTGCTACTGACATCGAGTTTCTaGAGGAGGGTGCCATTAGGCAGGGTGCCATTGGTC | + |
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Preference number: 6 (lower is better) Translates to: TETILLLLTSSF*RRVPLGRVPLV Trigger: GACCAATGGCACCCTGCCTAATGGCACCCTCCTCCAGAAACTCGATGTCAGTAGCAACAGTATCGTCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CAA 72 bp | AGTTTGGGCAGATCGGCCAGCCATCTGAGCGTGTACTaGTTGAGCAAGCGGAAGAAGATGCCGTTCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: SLGRSASHLSVY*LSKRKKMPFMF Trigger: GAACATGAACGGCATCTTCTTCCGCTTGCTCAACAAGTACACGCTCAGATGGCTGGCCGATCTGCCCAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CAA 72 bp | ATCACAATGGGCCCAAACCAGGAGCGATCCACCGTCTaGAGAATGTTGTGGCTGAGGTTGACCTCTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: ITMGPNQERSTV*RMLWLRLTSFS Trigger: GCTGAAAGAGGTCAACCTCAGCCACAACATTCTCAAGACGGTGGATCGCTCCTGGTTTGGGCCCATTGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CAA 90 bp | GCAATGGAGTTGTGGCTCAGGCTAAGACACTGGAGGCGTGAGAGATaGACAAACATCTCTGGCTTGATAGTCACCAGGTTGTTCCGAGAC | + |
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Preference number: 6 (lower is better) Translates to: AMELWLRLRHWRRER*TNISGLIVTRLFRD Trigger: GTCTCGGAACAACCTGGTGACTATCAAGCCAGAGATGTTTGTCAATCTCTCACGCCTCCAGTGTCTTAGCCTGAGCCACAACTCCATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CAA 90 bp | AACTGTGGTAGCTCACTGAACGATTTCCAGTGGTACAAGTCCAGTTaGTTATGGGACAGGTCCAGCACCTGCAGATTAGTCAGCGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: NCGSSLNDFQWYKSS*LWDRSSTCRLVSGR Trigger: CCTGCCGCTGACTAATCTGCAGGTGCTGGACCTGTCCCATAACAAACTGGACTTGTACCACTGGAAATCGTTCAGTGAGCTACCACAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 72 bp | CTGAACGATTTCCAGTGGTACAAGTCCAGTTTGTTATaGGACAGGTCCAGCACCTGCAGATTAGTCAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: LNDFQWYKSSLL*DRSSTCRLVSG Trigger: GCCGCTGACTAATCTGCAGGTGCTGGACCTGTCCCATAACAAACTGGACTTGTACCACTGGAAATCGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 72 bp | GCCTGCAACTGTGGTAGCTCACTGAACGATTTCCAGTaGTACAAGTCCAGTTTGTTATGGGACAGGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ACNCGSSLNDFQ*YKSSLLWDRSS Trigger: GCTGGACCTGTCCCATAACAAACTGGACTTGTACCACTGGAAATCGTTCAGTGAGCTACCACAGTTGCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CAA 72 bp | CACTGGAGGCGTGAGAGATTGACAAACATCTCTGGCTaGATAGTCACCAGGTTGTTCCGAGACAGGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: HWRRERLTNISG*IVTRLFRDRSM Trigger: CATGGACCTGTCTCGGAACAACCTGGTGACTATCAAGCCAGAGATGTTTGTCAATCTCTCACGCCTCCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CAA 90 bp | GAAGGTACCAAAGATGCTGAGCTGTGCCTGGTTGATGAAGTTCATTaGAAGATGCAGAGTGTGGAGTTTGGGCAGATCGGCCAGCCATCT | + |
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Preference number: 6 (lower is better) Translates to: EGTKDAELCLVDEVH*KMQSVEFGQIGQPS Trigger: AGATGGCTGGCCGATCTGCCCAAACTCCACACTCTGCATCTTCAAATGAACTTCATCAACCAGGCACAGCTCAGCATCTTTGGTACCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CAA 90 bp | AGGCTAAGACACTGGAGGCGTGAGAGATTGACAAACATCTCTGGCTaGATAGTCACCAGGTTGTTCCGAGACAGGTCCATGGTGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: RLRHWRRERLTNISG*IVTRLFRDRSMVNL Trigger: CAAGTTCACCATGGACCTGTCTCGGAACAACCTGGTGACTATCAAGCCAGAGATGTTTGTCAATCTCTCACGCCTCCAGTGTCTTAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 72 bp | AGAGAAAGTTCTCGCTTAGGTCCAGCACCGAGAGGTTaGCCAGACCTTGGAACCAGGAAGAGTTCAGTGTAT | + |
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Preference number: 6 (lower is better) Translates to: RESSRLGPAPRG*PDLGTRKSSVY Trigger: ATACACTGAACTCTTCCTGGTTCCAAGGTCTGGTCAACCTCTCGGTGCTGGACCTAAGCGAGAACTTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 72 bp | AGCTCAGGTCCAGGGCCTGCAACTGTGGTAGCTCACTaGACGATTTCCAGTGGTACAAGTCCAGTTTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: SSGPGPATVVAH*TISSGTSPVCY Trigger: ATAACAAACTGGACTTGTACCACTGGAAATCGTTCAGTGAGCTACCACAGTTGCAGGCCCTGGACCTGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS GCA 72 bp | GCGAAGGGCTCGGAAGGTACCAAAGATGCTGAGCTGTaGCTGGTTGATGAAGTTCATTTGAAGATGCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: AKGSEGTKDAEL*LVDEVHLKMQS Trigger: ACTCTGCATCTTCAAATGAACTTCATCAACCAGGCACAGCTCAGCATCTTTGGTACCTTCCGAGCCCTTCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CAA 72 bp | TTGTGGCTCAGGCTAAGACACTGGAGGCGTGAGAGATaGACAAACATCTCTGGCTTGATAGTCACCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LWLRLRHWRRER*TNISGLIVTRL Trigger: CAACCTGGTGACTATCAAGCCAGAGATGTTTGTCAATCTCTCACGCCTCCAGTGTCTTAGCCTGAGCCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CAA 90 bp | GGCTTGATAGTCACCAGGTTGTTCCGAGACAGGTCCATGGTGAACTaGAAGTTCTTACACCTGTCCATGAAGTTCTTAGAAGCAGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: GLIVTRLFRDRSMVN*KFLHLSMKFLEAGV Trigger: CACCCCTGCTTCTAAGAACTTCATGGACAGGTGTAAGAACTTCAAGTTCACCATGGACCTGTCTCGGAACAACCTGGTGACTATCAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS TCA 72 bp | AATGGAGTTGTGGCTCAGGCTAAGACACTGGAGGCGTaGGAGATTGACAAACATCTCTGGCTTGATAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: NGVVAQAKTLEA*EIDKHLWLDSH Trigger: GTGACTATCAAGCCAGAGATGTTTGTCAATCTCTCACGCCTCCAGTGTCTTAGCCTGAGCCACAACTCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CAA 72 bp | AAAGATGCTGAGCTGTGCCTGGTTGATGAAGTTCATTaGAAGATGCAGAGTGTGGAGTTTGGGCAGATCGGC | + |
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Preference number: 6 (lower is better) Translates to: KDAELCLVDEVH*KMQSVEFGQIG Trigger: GCCGATCTGCCCAAACTCCACACTCTGCATCTTCAAATGAACTTCATCAACCAGGCACAGCTCAGCATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CAA 72 bp | AGCTCACTGAACGATTTCCAGTGGTACAAGTCCAGTTaGTTATGGGACAGGTCCAGCACCTGCAGATTAGTC | + |
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Preference number: 6 (lower is better) Translates to: SSLNDFQWYKSS*LWDRSSTCRLV Trigger: GACTAATCTGCAGGTGCTGGACCTGTCCCATAACAAACTGGACTTGTACCACTGGAAATCGTTCAGTGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CAA 72 bp | CTCTGTAGCATGGACAGATGGGTCACAAAACTGAAATaGTGGCCTATACCCTTCATGCTAAAGGGCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LCSMDRWVTKLK*WPIPFMLKGWL Trigger: CAGCCAGCCCTTTAGCATGAAGGGTATAGGCCACAATTTCAGTTTTGTGACCCATCTGTCCATGCTACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CCA 72 bp | TGTAGCATGGACAGATGGGTCACAAAACTGAAATTGTaGCCTATACCCTTCATGCTAAAGGGCTGGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: CSMDRWVTKLKL*PIPFMLKGWLL Trigger: CAACAGCCAGCCCTTTAGCATGAAGGGTATAGGCCACAATTTCAGTTTTGTGACCCATCTGTCCATGCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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| CDS CAA 72 bp | GTCACCAGGTTGTTCCGAGACAGGTCCATGGTGAACTaGAAGTTCTTACACCTGTCCATGAAGTTCTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: VTRLFRDRSMVN*KFLHLSMKFLE Trigger: TTCTAAGAACTTCATGGACAGGTGTAAGAACTTCAAGTTCACCATGGACCTGTCTCGGAACAACCTGGTGAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062241.11 |
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