Pregenerated sensors for TLR6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051498Ensembl transcript IDs: ENSMUST00000062315.7, ENSMUST00000201307.3, ENSMUST00000239485.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGCAAACTCCATATCCATCCCCCAGCCTCATCCCCTGGCTCAGTaGAATCAAGGCTTCCATCAAGTCTCTGTCAAAGATATGAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: EANSISIPQPHPLAQ*NQGFHQVSVKDMKE Trigger: TTCCTTCATATCTTTGACAGAGACTTGATGGAAGCCTTGATTCCACTGAGCCAGGGGATGAGGCTGGGGGATGGATATGGAGTTTGCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR CCA 90 bp | CTGTCTAAGAAGCAAACTCCATATCCATCCCCCAGCCTCATCCCCTaGCTCAGTGGAATCAAGGCTTCCATCAAGTCTCTGTCAAAGATA | + |
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Preference number: 1 (lower is better) Translates to: LSKKQTPYPSPSLIP*LSGIKASIKSLSKI Trigger: TATCTTTGACAGAGACTTGATGGAAGCCTTGATTCCACTGAGCCAGGGGATGAGGCTGGGGGATGGATATGGAGTTTGCTTCTTAGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR TCA 90 bp | ACACTGAATTCATCCGGGAAAGGAGGAGGGAGAGGGCACTGTCTCTaGATGGTGGAGGATTTACCCAAAAAGGACTGTGTTAGCATCAAA | + |
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Preference number: 1 (lower is better) Translates to: TLNSSGKGGGRGHCL*MVEDLPKKDCVSIK Trigger: TTTGATGCTAACACAGTCCTTTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCTCCCTCCTCCTTTCCCGGATGAATTCAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR GCA 90 bp | ACTTTGTGCCTCCATAACAGGAGACCTGATGCAGAGAAAGAAGAATaGTATCATGGTTTCAGTCCAAGTCCCGAATTCCTGGCTTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: TLCLHNRRPDAEKEE*YHGFSPSPEFLALG Trigger: TCCCAAAGCCAGGAATTCGGGACTTGGACTGAAACCATGATAGCATTCTTCTTTCTCTGCATCAGGTCTCCTGTTATGGAGGCACAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTGCTCACACTGAATTCATCCGGGAAAGGAGGAGGGAGAGGGCACTGTCTATCCCAGCTCTTGGGTaGCTGAGGCAGAAGGGATAC | + |
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Preference number: 2 (lower is better) Translates to: SPAHTEFIRERRRERALSIPALG*LRQKGY Trigger: GTATCCCTTCTGCCTCAGCCACCCAAGAGCTGGGAT...AGACAGTGCCCTCTCCCTCCTCCTTTCCCGGATGAATTCAGTGTGAGCAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR-3UTR TCA 90 bp | GTCCTGCTCACACTGAATTCATCCGGGAAAGGAGGAGGGAGAGGGCACTGTCTCAAACCACAGTGTTCATaGGAGCCCAGGTTGACAGTT | + |
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Preference number: 2 (lower is better) Translates to: VLLTLNSSGKGGGRGHCLKPQCS*EPRLTV Trigger: AACTGTCAACCTGGGCTCTCATGAACACTGTGGTTT...GAGACAGTGCCCTCTCCCTCCTCCTTTCCCGGATGAATTCAGTGTGAGCAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR-3UTR TCA 90 bp | GGGACTGAGCTGCCTCTGTCTAAGAAGCAAACTCCATATCCATCCCCCAGCCTCAGTGTATCATGGCATTaGGGGCATGTGATGCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GTELPLSKKQTPYPSPSLSVSWH*GHVMQG Trigger: TCCCTGCATCACATGCCCTCAATGCCATGATACACT...GAGGCTGGGGGATGGATATGGAGTTTGCTTCTTAGACAGAGGCAGCTCAGTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR-3UTR CCA 90 bp | ACTGAGCTGCCTCTGTCTAAGAAGCAAACTCCATATCCATCCCCCAGCCTCATCTGTAATCCCAGCTCTTaGGTGGCTGAGGCAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: TELPLSKKQTPYPSPSLICNPSS*VAEAEG Trigger: CCCTTCTGCCTCAGCCACCCAAGAGCTGGGATTACA...GATGAGGCTGGGGGATGGATATGGAGTTTGCTTCTTAGACAGAGGCAGCTCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTGCTCACACTGAATTCATCCGGGAAAGGAGGAGGGAGAGGGCACTGTCTCATCCCCTGGCTCAGTaGAATCAAGGCTTCCATCAA | + |
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Preference number: 2 (lower is better) Translates to: SPAHTEFIRERRRERALSHPLAQ*NQGFHQ Trigger: TTGATGGAAGCCTTGATTCCACTGAGCCAGGGGATG...AGACAGTGCCCTCTCCCTCCTCCTTTCCCGGATGAATTCAGTGTGAGCAGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGGAGGGAGAGGGCACTGTCTCTGAATGGTGGAGGATTTACCCAAAAAGGCAAAGCAGACAACTATaGCAGCTGGGACTGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: KEEGEGTVSEWWRIYPKRQSRQL*QLGLSC Trigger: GCAGCTCAGTCCCAGCTGGCATAGTTGTCTGCTTTG...CCTTTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCTCCCTCCTCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGGAGGGAGAGGGCACTGTCTCTGAATGGTGGAGGATTTACCCAAAAAGGTTGTCCATTCAGCTGTaGACTCAACAGTGGGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: KEEGEGTVSEWWRIYPKRLSIQL*TQQWAS Trigger: ACTTGCCCACTGTTGAGTTCACAGCTGAATGGACAA...CCTTTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCTCCCTCCTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR-3UTR TCA 90 bp | AAAGCTCATTGTAAGGCCAACAAGGACTTACAGGAGTCTCCAACACATACAGTTGGCATTGAGGGCATGTaGTGCAGGGACTGCTCACCT | + |
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Preference number: 2 (lower is better) Translates to: KAHCKANKDLQESPTHTVGIEGM*CRDCSP Trigger: AGGTGAGCAGTCCCTGCATCACATGCCCTCAATGCC...AACTGTATGTGTTGGAGACTCCTGTAAGTCCTTGTTGGCCTTACAATGAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR-3UTR TCA 90 bp | GTAGCCTTCTTTCTTGCTAACATGAAGCCAGGTAGAGTCCTGCTCACACTGAATAGAGGGCACTGTCTCTaGATGGTGGAGGATTTACCC | + |
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Preference number: 2 (lower is better) Translates to: VAFFLANMKPGRVLLTLNRGHCL*MVEDLP Trigger: GGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCT...ATTCAGTGTGAGCAGGACTCTACCTGGCTTCATGTTAGCAAGAAAGAAGGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGAGGGCACTGTCTCTGAATGGTGGAGGATTTACCCAAAAAGGACTGTGTCACATCGTGAGACCCTaGTATAAGAACAAGAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: RERALSLNGGGFTQKGLCHIVRP*YKNKKN Trigger: ATTTTTCTTGTTCTTATATCAGGGTCTCACGATGTG...ACACAGTCCTTTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCTCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR-3UTR CCA 90 bp | GATGCCAACGGAACAAAGTTTCTGTTGTTCAGAAACTTTTACCAATACACACACGGCACTGTCTCTGAATaGTGGAGGATTTACCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: DANGTKFLLFRNFYQYTHGTVSE*WRIYPK Trigger: TTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCC...GTGTGTGTATTGGTAAAAGTTTCTGAACAACAGAAACTTTGTTCCGTTGGCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR CAA 90 bp | TATGAACATGTTTCAGCTCTTGATGCCAACGGAACAAAGTTTCTGTaGTTCAGAAACTTTTACCAATACACACACACACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: YEHVSALDANGTKFL*FRNFYQYTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTATTGGTAAAAGTTTCTGAACAACAGAAACTTTGTTCCGTTGGCATCAAGAGCTGAAACATGTTCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR CCA 72 bp | AAGCAAACTCCATATCCATCCCCCAGCCTCATCCCCTaGCTCAGTGGAATCAAGGCTTCCATCAAGTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: KQTPYPSPSLIP*LSGIKASIKSL Trigger: CAGAGACTTGATGGAAGCCTTGATTCCACTGAGCCAGGGGATGAGGCTGGGGGATGGATATGGAGTTTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR TCA 72 bp | CGAGGCCATGCAGTGTATCATGGCATTGAGGGCATGTaGTGCAGGGACTGCTCACCTTGTGATGATAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: RGHAVYHGIEGM*CRDCSPCDDKE Trigger: TTCCTTATCATCACAAGGTGAGCAGTCCCTGCATCACATGCCCTCAATGCCATGATACACTGCATGGCCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR TCA 72 bp | TCATCCGGGAAAGGAGGAGGGAGAGGGCACTGTCTCTaGATGGTGGAGGATTTACCCAAAAAGGACTGTGTT | + |
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Preference number: 3 (lower is better) Translates to: SSGKGGGRGHCL*MVEDLPKKDCV Trigger: AACACAGTCCTTTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCTCCCTCCTCCTTTCCCGGATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR GCA 72 bp | CATCAAAGCAGACAACTATGCCAGCTGGGACTGAGCTaGCTCTGTCTAAGAAGCAAACTCCATATCCATCCC | + |
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Preference number: 3 (lower is better) Translates to: HQSRQLCQLGLS*LCLRSKLHIHP Trigger: GGGATGGATATGGAGTTTGCTTCTTAGACAGAGGCAGCTCAGTCCCAGCTGGCATAGTTGTCTGCTTTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| 3UTR-3UTR CAA 90 bp | GTAGCCTTCTTTCTTGCTAACATGAAGCCAGGTAGAGTCCTGCTCACACTGAATCAGTGTATCATGGCATaGAGGGCATGTGATGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: VAFFLANMKPGRVLLTLNQCIMA*RACDAG Trigger: CCCTGCATCACATGCCCTCAATGCCATGATACACTG...ATTCAGTGTGAGCAGGACTCTACCTGGCTTCATGTTAGCAAGAAAGAAGGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | ACTGAGCTGCCTCTGTCTAAGAAGCAAACTCCATATCCATCCCCCAGCCTCATCGCCTGGCCCTGTGCCTaGTCTGTGTCCACTGACACA | + |
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Preference number: 4 (lower is better) Translates to: TELPLSKKQTPYPSPSLIAWPCA*SVSTDT Trigger: TGTGTCAGTGGACACAGACCAGGCACAGGGCCAGGC...GATGAGGCTGGGGGATGGATATGGAGTTTGCTTCTTAGACAGAGGCAGCTCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | GTGTTAGCATCAAAGCAGACAACTATGCCAGCTGGGACTGAGCTGCCTCTGTCTCTAAGGGGATGTGCCTaGCCCTGTGCCTGGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VLASKQTTMPAGTELPLSLRGCA*PCAWSV Trigger: CACAGACCAGGCACAGGGCCAGGCACATCCCCTTAG...AGACAGAGGCAGCTCAGTCCCAGCTGGCATAGTTGTCTGCTTTGATGCTAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | GTCCTGCTCACACTGAATTCATCCGGGAAAGGAGGAGGGAGAGGGCACTGTCTCACAAAGTTCCTCTCATaGAGGCAAACCCGGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: VLLTLNSSGKGGGRGHCLTKFLS*RQTRMS Trigger: TGACATCCGGGTTTGCCTCCATGAGAGGAACTTTGT...GAGACAGTGCCCTCTCCCTCCTCCTTTCCCGGATGAATTCAGTGTGAGCAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR TCA 90 bp | GTGTTAGCATCAAAGCAGACAACTATGCCAGCTGGGACTGAGCTGCCTCTGTCTCAGCTTAGATGCAAGTaGGCAACTGGGAGCAGATCC | + |
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Preference number: 4 (lower is better) Translates to: VLASKQTTMPAGTELPLSQLRCK*ATGSRS Trigger: GGATCTGCTCCCAGTTGCTCACTTGCATCTAAGCTG...AGACAGAGGCAGCTCAGTCCCAGCTGGCATAGTTGTCTGCTTTGATGCTAACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR GCA 90 bp | AAGGAGGAGGGAGAGGGCACTGTCTCTGAATGGTGGAGGATTTACCCAAAAAGGGCTACATTGAGTTCCTaGAAAGCCTGCAGGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: KEEGEGTVSEWWRIYPKRATLSS*KACRWV Trigger: CACCCACCTGCAGGCTTTGCAGGAACTCAATGTAGC...CCTTTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCTCCCTCCTCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | AGTCCTGCTCACACTGAATTCATCCGGGAAAGGAGGAGGGAGAGGGCACTGTCTTCACTCTGGATGAAGTaGGGAGACAGCACAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: SPAHTEFIRERRRERALSSLWMK*GDSTKM Trigger: CATCTTTGTGCTGTCTCCCCACTTCATCCAGAGTGA...AGACAGTGCCCTCTCCCTCCTCCTTTCCCGGATGAATTCAGTGTGAGCAGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR TCA 90 bp | GGCCCCATGCTAATTGTCCATTCAGCTGTGAACTCAACAGTGGGCAAGTCCATTGAAGGTCAAGGACCTTaGCCTTGGGAGGTAAGCATC | + |
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Preference number: 4 (lower is better) Translates to: GPMLIVHSAVNSTVGKSIEGQGP*PWEVSI Trigger: GATGCTTACCTCCCAAGGTCAAGGTCCTTGACCTTC...AATGGACTTGCCCACTGTTGAGTTCACAGCTGAATGGACAATTAGCATGGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR TCA 90 bp | AGTCCTGCTCACACTGAATTCATCCGGGAAAGGAGGAGGGAGAGGGCACTGTCTATTATCCTGTTGTTGTaGAGGTCAAGGACCTTGACC | + |
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Preference number: 4 (lower is better) Translates to: SPAHTEFIRERRRERALSIILLL*RSRTLT Trigger: GGTCAAGGTCCTTGACCTTCACAACAACAGGATAAT...AGACAGTGCCCTCTCCCTCCTCCTTTCCCGGATGAATTCAGTGTGAGCAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR GCA 90 bp | GGGACTGAGCTGCCTCTGTCTAAGAAGCAAACTCCATATCCATCCCCCAGCCTCTCAGCTTCGTCAGGTTaGCAAATTCCTTACACACAG | + |
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Preference number: 4 (lower is better) Translates to: GTELPLSKKQTPYPSPSLSASSG*QIPYTQ Trigger: CTGTGTGTAAGGAATTTGGCAACCTGACGAAGCTGA...GAGGCTGGGGGATGGATATGGAGTTTGCTTCTTAGACAGAGGCAGCTCAGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | GGCCCCATGCTAATTGTCCATTCAGCTGTGAACTCAACAGTGGGCAAGTCCATTCAGGGCTTTTGTTCTTaGTGGCAGGTCTTTGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: GPMLIVHSAVNSTVGKSIQGFCS*WQVFGD Trigger: GTCCCCAAAGACCTGCCACCAAGAACAAAAGCCCTG...AATGGACTTGCCCACTGTTGAGTTCACAGCTGAATGGACAATTAGCATGGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | AGTCCTGCTCACACTGAATTCATCCGGGAAAGGAGGAGGGAGAGGGCACTGTCTACAAAAGCATGGAACTaGAGGTTTCTCTGGAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SPAHTEFIRERRRERALSTKAWN*RFLWSS Trigger: GGAACTCCAGAGAAACCTCCAGTTCCATGCTTTTGT...AGACAGTGCCCTCTCCCTCCTCCTTTCCCGGATGAATTCAGTGTGAGCAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR TCA 90 bp | AAGGAGGAGGGAGAGGGCACTGTCTCTGAATGGTGGAGGATTTACCCAAAAAGGCAGAACTCTCAGCTCTaGCAGAAAGCTGATATCAGG | + |
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Preference number: 4 (lower is better) Translates to: KEEGEGTVSEWWRIYPKRQNSQL*QKADIR Trigger: CCTGATATCAGCTTTCTGTCAGAGCTGAGAGTTCTG...CCTTTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCTCCCTCCTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR GCA 90 bp | GTAGCCTTCTTTCTTGCTAACATGAAGCCAGGTAGAGTCCTGCTCACACTGAATCAAGTAAGTCCGCTGTaGCATGAGAGCCCGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: VAFFLANMKPGRVLLTLNQVSPL*HESPQL Trigger: AAGCTGCGGGCTCTCATGGCACAGCGGACTTACTTG...ATTCAGTGTGAGCAGGACTCTACCTGGCTTCATGTTAGCAAGAAAGAAGGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | GTCCTGCTCACACTGAATTCATCCGGGAAAGGAGGAGGGAGAGGGCACTGTCTCGTTGTTTCTATGTGCTaGAGGGTCACATTCAATAAG | + |
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Preference number: 4 (lower is better) Translates to: VLLTLNSSGKGGGRGHCLVVSMC*RVTFNK Trigger: CTTATTGAATGTGACCCTCCAGCACATAGAAACAAC...GAGACAGTGCCCTCTCCCTCCTCCTTTCCCGGATGAATTCAGTGTGAGCAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | GTGTTAGCATCAAAGCAGACAACTATGCCAGCTGGGACTGAGCTGCCTCTGTCTAACTGGAGGTTTCTCTaGAGTTCCTCTAAGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: VLASKQTTMPAGTELPLSNWRFL*SSSKGM Trigger: CATCCCCTTAGAGGAACTCCAGAGAAACCTCCAGTT...AGACAGAGGCAGCTCAGTCCCAGCTGGCATAGTTGTCTGCTTTGATGCTAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR TCA 90 bp | GGCCCCATGCTAATTGTCCATTCAGCTGTGAACTCAACAGTGGGCAAGTCCATTGTGGTATTGGGAATCTaGAGACTTTCTGTTTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: GPMLIVHSAVNSTVGKSIVVLGI*RLSVSP Trigger: CGGGGAAACAGAAAGTCTTCAGATTCCCAATACCAC...AATGGACTTGCCCACTGTTGAGTTCACAGCTGAATGGACAATTAGCATGGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR TCA 90 bp | AAGGAGGAGGGAGAGGGCACTGTCTCTGAATGGTGGAGGATTTACCCAAAAAGGTTAAGTTGTAAATATTaGGGTACTCCACCGGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: KEEGEGTVSEWWRIYPKRLSCKY*GTPPVG Trigger: CCCGACCGGTGGAGTACCTCAATATTTACAACTTAA...CCTTTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCTCCCTCCTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR TCA 90 bp | AGTCCTGCTCACACTGAATTCATCCGGGAAAGGAGGAGGGAGAGGGCACTGTCTAAGGTGGAACAGCCTTaGAAAACACTGTCAGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: SPAHTEFIRERRRERALSKVEQP*KTLSVK Trigger: TTTTACTGACAGTGTTTTTCAAGGCTGTTCCACCTT...AGACAGTGCCCTCTCCCTCCTCCTTTCCCGGATGAATTCAGTGTGAGCAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR TCA 90 bp | CAAGTCTCTGTCAAAGATATGAAGGAACTAGAAGCCAGAACTCTCAACTTTGTGAAGTCCGCTGTGCCATaGGAGCCCGCAGCTTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: QVSVKDMKELEARTLNFVKSAVP*EPAACG Trigger: ACCACAAGCTGCGGGCTCTCATGGCACAGCGGACTT...CACAAAGTTGAGAGTTCTGGCTTCTAGTTCCTTCATATCTTTGACAGAGACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR GCA 90 bp | CAAGTCTCTGTCAAAGATATGAAGGAACTAGAAGCCAGAACTCTCAACTTTGTGTCCTCTAAGGGGATGTaGCTGGCCCTGTGCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: QVSVKDMKELEARTLNFVSSKGM*LALCLV Trigger: GACCAGGCACAGGGCCAGGCACATCCCCTTAGAGGA...CACAAAGTTGAGAGTTCTGGCTTCTAGTTCCTTCATATCTTTGACAGAGACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | AGGGAGAGGGCACTGTCTCTGAATGGTGGAGGATTTACCCAAAAAGGACTGTGTAGCTCACATGTGCATTaGAATGGGTTGTTTCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: RERALSLNGGGFTQKGLCSSHVH*NGLFPA Trigger: AGCGGGAAACAACCCATTCCAATGCACATGTGAGCT...ACACAGTCCTTTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | AGTCCTGCTCACACTGAATTCATCCGGGAAAGGAGGAGGGAGAGGGCACTGTCTTTGAACAAGAATACATaGAAATCAAGGCTCCGTATC | + |
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Preference number: 4 (lower is better) Translates to: SPAHTEFIRERRRERALSLNKNT*KSRLRI Trigger: GATACGGAGCCTTGATTTCCATGTATTCTTGTTCAA...AGACAGTGCCCTCTCCCTCCTCCTTTCCCGGATGAATTCAGTGTGAGCAGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | AGGGAGAGGGCACTGTCTCTGAATGGTGGAGGATTTACCCAAAAAGGACTGTGTCCAAATGGAGAACGGTaGTATTGGGAATCTGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: RERALSLNGGGFTQKGLCPNGER*YWESED Trigger: GTCTTCAGATTCCCAATACCACCGTTCTCCATTTGG...ACACAGTCCTTTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCTCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR TCA 90 bp | ACTGAGCTGCCTCTGTCTAAGAAGCAAACTCCATATCCATCCCCCAGCCTCATCTCAGATATAGAGTTTTaGGACAGACTCAGGGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: TELPLSKKQTPYPSPSLISDIEF*DRLRAF Trigger: AAAAGCCCTGAGTCTGTCTCAAAACTCTATATCTGA...GATGAGGCTGGGGGATGGATATGGAGTTTGCTTCTTAGACAGAGGCAGCTCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR GCA 90 bp | GGCCCCATGCTAATTGTCCATTCAGCTGTGAACTCAACAGTGGGCAAGTCCATTCAGCAAGAGATGTTTTaGAACCGATTGTGTGAGACA | + |
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Preference number: 4 (lower is better) Translates to: GPMLIVHSAVNSTVGKSIQQEMF*NRLCET Trigger: TGTCTCACACAATCGGTTGCAAAACATCTCTTGCTG...AATGGACTTGCCCACTGTTGAGTTCACAGCTGAATGGACAATTAGCATGGGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR GCA 90 bp | GGCCCCATGCTAATTGTCCATTCAGCTGTGAACTCAACAGTGGGCAAGTCCATTCAGGTTGTTTCTATGTaGTGGAGGGTCACATTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GPMLIVHSAVNSTVGKSIQVVSM*WRVTFN Trigger: ATTGAATGTGACCCTCCAGCACATAGAAACAACCTG...AATGGACTTGCCCACTGTTGAGTTCACAGCTGAATGGACAATTAGCATGGGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR GCA 90 bp | GGCCCCATGCTAATTGTCCATTCAGCTGTGAACTCAACAGTGGGCAAGTCCATTACCCAGGCAGAATCATaGTCACTGTATGAGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GPMLIVHSAVNSTVGKSITQAES*SLYETK Trigger: TTTTGTCTCATACAGTGAGCATGATTCTGCCTGGGT...AATGGACTTGCCCACTGTTGAGTTCACAGCTGAATGGACAATTAGCATGGGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | GTGTTAGCATCAAAGCAGACAACTATGCCAGCTGGGACTGAGCTGCCTCTGTCTGAAAAGAGGAACACTTaGTTTTTGACGTGCTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: VLASKQTTMPAGTELPLSEKRNT*FLTCSI Trigger: GATAGAGCACGTCAAAAACCAAGTGTTCCTCTTTTC...AGACAGAGGCAGCTCAGTCCCAGCTGGCATAGTTGTCTGCTTTGATGCTAACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR TCA 90 bp | GGCCCCATGCTAATTGTCCATTCAGCTGTGAACTCAACAGTGGGCAAGTCCATTAACAAGCTATTTGGATaGAAGACCAAATGGAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: GPMLIVHSAVNSTVGKSINKLFG*KTKWRT Trigger: CGTTCTCCATTTGGTCTTTCATCCAAATAGCTTGTT...AATGGACTTGCCCACTGTTGAGTTCACAGCTGAATGGACAATTAGCATGGGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR GCA 90 bp | TCTGTTGTTCAGAAACTTTTACCAATACACACACACACACACACACACACACACAATGAGAGGTCTAGATaGCTCAGGCTCGCCATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVVQKLLPIHTHTHTHTHNERSR*LRLAIG Trigger: CCCTATGGCGAGCCTGAGGCATCTAGACCTCTCATT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTATTGGTAAAAGTTTCTGAACAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | GTGTTAGCATCAAAGCAGACAACTATGCCAGCTGGGACTGAGCTGCCTCTGTCTCATCTTTCTCTAGGTTaGGTAGTAATTCGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLASKQTTMPAGTELPLSHLSLG*VVIRSS Trigger: TGAAGAACGAATTACTACCCAACCTAGAGAAAGATG...AGACAGAGGCAGCTCAGTCCCAGCTGGCATAGTTGTCTGCTTTGATGCTAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR TCA 90 bp | TCTGTTGTTCAGAAACTTTTACCAATACACACACACACACACACACACACACACGTGCTCTATCATCAGTaGCTTCAGTGCTGTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SVVQKLLPIHTHTHTHTHVLYHQ*LQCCLR Trigger: TCGGAGACAGCACTGAAGTCACTGATGATAGAGCAC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTATTGGTAAAAGTTTCTGAACAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR TCA 90 bp | AGGGAGAGGGCACTGTCTCTGAATGGTGGAGGATTTACCCAAAAAGGACTGTGTGTCCTGTCATATGCATaGGAGTTCAAAGAATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RERALSLNGGGFTQKGLCVLSYA*EFKEFK Trigger: TTTGAATTCTTTGAACTCTCATGCATATGACAGGAC...ACACAGTCCTTTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCTCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | AGGGAGAGGGCACTGTCTCTGAATGGTGGAGGATTTACCCAAAAAGGACTGTGTAGAGAACAAGCTATTTaGATGAAAGACCAAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RERALSLNGGGFTQKGLCREQAI*MKDQME Trigger: CTCCATTTGGTCTTTCATCCAAATAGCTTGTTCTCT...ACACAGTCCTTTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCTCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | AAAGCTCATTGTAAGGCCAACAAGGACTTACAGGAGTCTCCAACACATACAGTTAGTATCACAGGACAGTaGAGACATGTGGAAGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAHCKANKDLQESPTHTVSITGQ*RHVEVP Trigger: AGGGACTTCCACATGTCTCCACTGTCCTGTGATACT...AACTGTATGTGTTGGAGACTCCTGTAAGTCCTTGTTGGCCTTACAATGAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | CAAGTCTCTGTCAAAGATATGAAGGAACTAGAAGCCAGAACTCTCAACTTTGTGGGAGAACGGTGGTATTaGGAATCTGAAGACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVSVKDMKELEARTLNFVGERWY*ESEDFL Trigger: CAGAAAGTCTTCAGATTCCCAATACCACCGTTCTCC...CACAAAGTTGAGAGTTCTGGCTTCTAGTTCCTTCATATCTTTGACAGAGACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | TGTCAAAGATATGAAGGAACTAGAAGCCAGAACTCTCAACTTTGTGCCTCCATATCCCTTAGAGCTTTCTaGGTAGTCACACCTGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CQRYEGTRSQNSQLCASISLRAF*VVTPVR Trigger: TCTTACAGGTGTGACTACCCAGAAAGCTCTAAGGGA...TATGGAGGCACAAAGTTGAGAGTTCTGGCTTCTAGTTCCTTCATATCTTTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR TCA 90 bp | CAAGTCTCTGTCAAAGATATGAAGGAACTAGAAGCCAGAACTCTCAACTTTGTGGTACATCAAAGTCATTaGATGAGAGGTCTAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: QVSVKDMKELEARTLNFVVHQSH*MRGLDA Trigger: GGCATCTAGACCTCTCATTCAATGACTTTGATGTAC...CACAAAGTTGAGAGTTCTGGCTTCTAGTTCCTTCATATCTTTGACAGAGACTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
||
| CDS-3UTR TCA 90 bp | GATGCCAACGGAACAAAGTTTCTGTTGTTCAGAAACTTTTACCAATACACACACAGGTTGGACCTCTGGTaGGTTCTGATAAAAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DANGTKFLLFRNFYQYTHRLDLW*VLIKMS Trigger: TGACATTTTTATCAGAACTCACCAGAGGTCCAACCT...GTGTGTGTATTGGTAAAAGTTTCTGAACAACAGAAACTTTGTTCCGTTGGCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | CAAGTCTCTGTCAAAGATATGAAGGAACTAGAAGCCAGAACTCTCAACTTTGTGGCAATCTCTTTAAGGTaGAACAGCCTTGAAAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: QVSVKDMKELEARTLNFVAISLR*NSLEKH Trigger: GTGTTTTTCAAGGCTGTTCCACCTTAAAGAGATTGC...CACAAAGTTGAGAGTTCTGGCTTCTAGTTCCTTCATATCTTTGACAGAGACTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CCA 90 bp | GATGCCAACGGAACAAAGTTTCTGTTGTTCAGAAACTTTTACCAATACACACACTATGAGACAAAAGCATaGAACTGGAGGTTTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DANGTKFLLFRNFYQYTHYETKA*NWRFLW Trigger: CCAGAGAAACCTCCAGTTCCATGCTTTTGTCTCATA...GTGTGTGTATTGGTAAAAGTTTCTGAACAACAGAAACTTTGTTCCGTTGGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR TCA 90 bp | CAAGTCTCTGTCAAAGATATGAAGGAACTAGAAGCCAGAACTCTCAACTTTGTGACAGACATGTTCACTTaGACAGAGAACAAGCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: QVSVKDMKELEARTLNFVTDMFT*TENKLF Trigger: AAATAGCTTGTTCTCTGTTCAAGTGAACATGTCTGT...CACAAAGTTGAGAGTTCTGGCTTCTAGTTCCTTCATATCTTTGACAGAGACTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR GCA 90 bp | GATGCCAACGGAACAAAGTTTCTGTTGTTCAGAAACTTTTACCAATACACACACACTTGGTTTTTGACGTaGTCTATCATCAGTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: DANGTKFLLFRNFYQYTHTWFLT*SIISDF Trigger: GAAGTCACTGATGATAGAGCACGTCAAAAACCAAGT...GTGTGTGTATTGGTAAAAGTTTCTGAACAACAGAAACTTTGTTCCGTTGGCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR GCA 90 bp | CAAGTCTCTGTCAAAGATATGAAGGAACTAGAAGCCAGAACTCTCAACTTTGTGGCATGTCCTGTCATATaGATGAGAGTTCAAAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: QVSVKDMKELEARTLNFVACPVI*MRVQRI Trigger: AATTCTTTGAACTCTCATGCATATGACAGGACATGC...CACAAAGTTGAGAGTTCTGGCTTCTAGTTCCTTCATATCTTTGACAGAGACTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR GCA 90 bp | TCTGTTGTTCAGAAACTTTTACCAATACACACACACACACACACACACACACACTGTAAGATAAGTGTCTaGAATCTCTTTAAGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVVQKLLPIHTHTHTHTHCKISV*NLFKVE Trigger: TTCCACCTTAAAGAGATTGCAGACACTTATCTTACA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTATTGGTAAAAGTTTCTGAACAACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CAA 90 bp | AGTCCTGCTCACACTGAATTCATCCGGGAAAGGAGGAGGGAGAGGGCACTGTCTCCTCCACCACTTCTCTaGCTACCCAGCCTATGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPAHTEFIRERRRERALSPPPLL*LPSLCS Trigger: AGAACATAGGCTGGGTAGCAAGAGAAGTGGTGGAGG...AGACAGTGCCCTCTCCCTCCTCCTTTCCCGGATGAATTCAGTGTGAGCAGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS CCA 90 bp | CGACTATTAAGGCCAGGGCGCAAACAAAGTGGAAACTCCCCACGATaGGTTTTCTGTCTTGGCTCATGTTGCAGAGGCTATCCCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLLRPGRKQSGNSPR*VFCLGSCCRGYPRG Trigger: CCCTCTGGGATAGCCTCTGCAACATGAGCCAAGACAGAAAACCCATCGTGGGGAGTTTCCACTTTGTTTGCGCCCTGGCCTTAATAGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239485.2 |
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| CDS-3UTR CAA 90 bp | GGGACTGAGCTGCCTCTGTCTAAGAAGCAAACTCCATATCCATCCCCCAGCCTCAATGAAGCTCTAAGGTaGGCCCAAAACAGCCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: GTELPLSKKQTPYPSPSLNEALR*AQNSPR Trigger: ACGTGGGCTGTTTTGGGCCAACCTTAGAGCTTCATT...GAGGCTGGGGGATGGATATGGAGTTTGCTTCTTAGACAGAGGCAGCTCAGTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CAA 90 bp | AGGGAGAGGGCACTGTCTCTGAATGGTGGAGGATTTACCCAAAAAGGACTGTGTCCGAGCACTTCCAGGTaGTTTCTATGTGCTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RERALSLNGGGFTQKGLCPSTSR*FLCAGG Trigger: CCCTCCAGCACATAGAAACAACCTGGAAGTGCTCGG...ACACAGTCCTTTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CAA 90 bp | GTGTTAGCATCAAAGCAGACAACTATGCCAGCTGGGACTGAGCTGCCTCTGTCTACAGACTCAGGGCTTTaGTTCTTGGTGGCAGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLASKQTTMPAGTELPLSTDSGL*FLVAGL Trigger: AAGACCTGCCACCAAGAACAAAAGCCCTGAGTCTGT...AGACAGAGGCAGCTCAGTCCCAGCTGGCATAGTTGTCTGCTTTGATGCTAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CAA 90 bp | GGCCCCATGCTAATTGTCCATTCAGCTGTGAACTCAACAGTGGGCAAGTCCATTTCAAGGACCTTGACCTaGGGAGGTAAGCATCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GPMLIVHSAVNSTVGKSISRTLT*GGKHLK Trigger: CTTCAGATGCTTACCTCCCAAGGTCAAGGTCCTTGA...AATGGACTTGCCCACTGTTGAGTTCACAGCTGAATGGACAATTAGCATGGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS TCA 90 bp | GACAGAAAGCTGATATCAGGCATCCGAAGCTCAGATATAGAGTTTTaGGACAGACTCAGGGCTTTTGTTCTTGGTGGCAGGTCTTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DRKLISGIRSSDIEF*DRLRAFVLGGRSLG Trigger: CCCCAAAGACCTGCCACCAAGAACAAAAGCCCTGAGTCTGTCTCAAAACTCTATATCTGAGCTTCGGATGCCTGATATCAGCTTTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062315.7 ENSMUST00000201307.3 ENSMUST00000239485.2 |
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| CDS-3UTR CAA 90 bp | GTGTTAGCATCAAAGCAGACAACTATGCCAGCTGGGACTGAGCTGCCTCTGTCTCTCAGATATAGAGTTTaGAGACAGACTCAGGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLASKQTTMPAGTELPLSLRYRV*RQTQGF Trigger: AAAGCCCTGAGTCTGTCTCAAAACTCTATATCTGAG...AGACAGAGGCAGCTCAGTCCCAGCTGGCATAGTTGTCTGCTTTGATGCTAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CAA 90 bp | AAGGAGGAGGGAGAGGGCACTGTCTCTGAATGGTGGAGGATTTACCCAAAAAGGATGTTTTGCAACCGATaGTGTGAGACATCCAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KEEGEGTVSEWWRIYPKRMFCNR*CETSRY Trigger: ATACCTGGATGTCTCACACAATCGGTTGCAAAACAT...CCTTTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCTCCCTCCTCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CAA 90 bp | ACTGAGCTGCCTCTGTCTAAGAAGCAAACTCCATATCCATCCCCCAGCCTCATCTATCTACTGGGAATGTaGTTCTGTAGAATGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TELPLSKKQTPYPSPSLIYLLGM*FCRMGS Trigger: GGAACCCATTCTACAGAACAACATTCCCAGTAGATA...GATGAGGCTGGGGGATGGATATGGAGTTTGCTTCTTAGACAGAGGCAGCTCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS TCA 90 bp | ACACCGAGTATAGCGCCTCCTTTGAAAAGAGGAACACTTGGTTTTTaGCGTGCTCTATCATCAGTGACTTCAGTGCTGTCTCCGAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: TPSIAPPLKRGTLGF*RALSSVTSVLSPSK Trigger: CTTACTCGGAGACAGCACTGAAGTCACTGATGATAGAGCACGTCAAAAACCAAGTGTTCCTCTTTTCAAAGGAGGCGCTATACTCGGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS GCA 90 bp | CTGTTTCCCCGCCTTTTATATGATAACTCACTAAGTCCAGAAGAATaGAGCTTAGATGCAAGTGAGCAACTGGGAGCAGATCCAGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LFPRLLYDNSLSPEE*SLDASEQLGADPVV Trigger: GACAACTGGATCTGCTCCCAGTTGCTCACTTGCATCTAAGCTGCATTCTTCTGGACTTAGTGAGTTATCATATAAAAGGCGGGGAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS-3UTR CAA 90 bp | ACTGAGCTGCCTCTGTCTAAGAAGCAAACTCCATATCCATCCCCCAGCCTCATCTACAGACATGTTCACTaGAACAGAGAACAAGCTATT | + |
|
Preference number: 5 (lower is better) Translates to: TELPLSKKQTPYPSPSLIYRHVH*NREQAI Trigger: AATAGCTTGTTCTCTGTTCAAGTGAACATGTCTGTA...GATGAGGCTGGGGGATGGATATGGAGTTTGCTTCTTAGACAGAGGCAGCTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CAA 90 bp | AGGGAGAGGGCACTGTCTCTGAATGGTGGAGGATTTACCCAAAAAGGACTGTGTTCATCTTTCTCTAGGTaGGGTAGTAATTCGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RERALSLNGGGFTQKGLCSSFSR*GSNSFF Trigger: GAAGAACGAATTACTACCCAACCTAGAGAAAGATGA...ACACAGTCCTTTTTGGGTAAATCCTCCACCATTCAGAGACAGTGCCCTCTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS TCA 90 bp | TTTGCAACCGATTGTGTGAGACATCCAGGTATTCTAAGTCCTGATTaGACAAGAATACATGGAAATCAAGGCTCCGTATCCTGTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FATDCVRHPGILSPD*TRIHGNQGSVSCCG Trigger: CCCACAACAGGATACGGAGCCTTGATTTCCATGTATTCTTGTTCAATCAGGACTTAGAATACCTGGATGTCTCACACAATCGGTTGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CCA 90 bp | AATTGGAAAAGTTTAACCGAGCACTTCCAGGTTGTTTCTATGTGCTaGAGGGTCACATTCAATAAGGTTGGACCTCTGGTGAGTTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: NWKSLTEHFQVVSMC*RVTFNKVGPLVSSD Trigger: ATCAGAACTCACCAGAGGTCCAACCTTATTGAATGTGACCCTCCAGCACATAGAAACAACCTGGAAGTGCTCGGTTAAACTTTTCCAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS-3UTR CAA 90 bp | GTAGCCTTCTTTCTTGCTAACATGAAGCCAGGTAGAGTCCTGCTCACACTGAATCAGAGAACAAGCTATTaGGATGAAAGACCAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: VAFFLANMKPGRVLLTLNQRTSY*DERPNG Trigger: TCCATTTGGTCTTTCATCCAAATAGCTTGTTCTCTG...ATTCAGTGTGAGCAGGACTCTACCTGGCTTCATGTTAGCAAGAAAGAAGGCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS-3UTR CAA 90 bp | GATGCCAACGGAACAAAGTTTCTGTTGTTCAGAAACTTTTACCAATACACACACGAGTTGGATGCTACATaGAGTTCCTGCAAAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DANGTKFLLFRNFYQYTHELDAT*SSCKAC Trigger: GCAGGCTTTGCAGGAACTCAATGTAGCATCCAACTC...GTGTGTGTATTGGTAAAAGTTTCTGAACAACAGAAACTTTGTTCCGTTGGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
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| CDS TCA 90 bp | ATGTTTTGCAACCGATTGTGTGAGACATCCAGGTATTCTAAGTCCTaGTTGAACAAGAATACATGGAAATCAAGGCTCCGTATCCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: MFCNRLCETSRYSKS*LNKNTWKSRLRILL Trigger: CAACAGGATACGGAGCCTTGATTTCCATGTATTCTTGTTCAATCAGGACTTAGAATACCTGGATGTCTCACACAATCGGTTGCAAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CCA 90 bp | GAACAGAGAACAAGCTATTTGGATGAAAGACCAAATGGAGAACGGTaGTATTGGGAATCTGAAGACTTTCTGTTTCCCCGCCTTTTATAT | + |
|
Preference number: 5 (lower is better) Translates to: EQRTSYLDERPNGER*YWESEDFLFPRLLY Trigger: ATATAAAAGGCGGGGAAACAGAAAGTCTTCAGATTCCCAATACCACCGTTCTCCATTTGGTCTTTCATCCAAATAGCTTGTTCTCTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CCA 90 bp | AGAACAAGCTATTTGGATGAAAGACCAAATGGAGAACGGTGGTATTaGGAATCTGAAGACTTTCTGTTTCCCCGCCTTTTATATGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: RTSYLDERPNGERWY*ESEDFLFPRLLYDN Trigger: GTTATCATATAAAAGGCGGGGAAACAGAAAGTCTTCAGATTCCCAATACCACCGTTCTCCATTTGGTCTTTCATCCAAATAGCTTGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS-3UTR CAA 90 bp | GATGCCAACGGAACAAAGTTTCTGTTGTTCAGAAACTTTTACCAATACACACACGAGATAGAGAGCATCTaGATGTTCATCTCAGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: DANGTKFLLFRNFYQYTHEIESI*MFISAN Trigger: GTTTGCTGAGATGAACATCAAGATGCTCTCTATCTC...GTGTGTGTATTGGTAAAAGTTTCTGAACAACAGAAACTTTGTTCCGTTGGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062315.7 |
||
| CDS TCA 90 bp | TTTCTATGTGCTGGAGGGTCACATTCAATAAGGTTGGACCTCTGGTaGGTTCTGATAAAAATGTCATTAACCTTTGACAGTTTTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: FLCAGGSHSIRLDLW*VLIKMSLTFDSFHH Trigger: ATGATGAAAACTGTCAAAGGTTAATGACATTTTTATCAGAACTCACCAGAGGTCCAACCTTATTGAATGTGACCCTCCAGCACATAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS TCA 90 bp | CTTTGTAAGATAAGTGTCTGCAATCTCTTTAAGGTGGAACAGCCTTaGAAAACACTGTCAGTAAAAACATTCTGGGTAAAGTTCAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LCKISVCNLFKVEQP*KTLSVKTFWVKFRN Trigger: ATTTCTGAACTTTACCCAGAATGTTTTTACTGACAGTGTTTTTCAAGGCTGTTCCACCTTAAAGAGATTGCAGACACTTATCTTACAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS GCA 72 bp | GCCCTTCTCAGTAGGCCATTCCAAGTAAGTCCGCTGTaGCATGAGAGCCCGCAGCTTGTGGTATCTACTGGG | + |
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Preference number: 6 (lower is better) Translates to: ALLSRPFQVSPL*HESPQLVVSTG Trigger: CCCAGTAGATACCACAAGCTGCGGGCTCTCATGGCACAGCGGACTTACTTGGAATGGCCTACTGAGAAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CCA 72 bp | AGGCCAGGGCGCAAACAAAGTGGAAACTCCCCACGATaGGTTTTCTGTCTTGGCTCATGTTGCAGAGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: RPGRKQSGNSPR*VFCLGSCCRGY Trigger: ATAGCCTCTGCAACATGAGCCAAGACAGAAAACCCATCGTGGGGAGTTTCCACTTTGTTTGCGCCCTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239485.2 |
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| CDS TCA 72 bp | GGATGGCGGGCACACCATGTGGATGAAAGGGGTGTCTaGGATAGAGAGCATCTTGATGTTCATCTCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: GWRAHHVDERGV*DREHLDVHLSK Trigger: TTTGCTGAGATGAACATCAAGATGCTCTCTATCTCAGACACCCCTTTCATCCACATGGTGTGCCCGCCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS TCA 72 bp | CCTCCACCACTTCTCTTGCTACCCAGCCTATGTTCTTaGCAAAGTCCCTCAGCTCACATGTGCATTGGAATG | + |
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Preference number: 6 (lower is better) Translates to: PPPLLLLPSLCS*QSPSAHMCIGM Trigger: CATTCCAATGCACATGTGAGCTGAGGGACTTTGTCAAGAACATAGGCTGGGTAGCAAGAGAAGTGGTGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS GCA 72 bp | TGCCTCAGGCTCGCCATAGGGCAGCAAGAGATGTTTTaGAACCGATTGTGTGAGACATCCAGGTATTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: CLRLAIGQQEMF*NRLCETSRYSK Trigger: CTTAGAATACCTGGATGTCTCACACAATCGGTTGCAAAACATCTCTTGCTGCCCTATGGCGAGCCTGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CCA 72 bp | ACAAAGTGGAAACTCCCCACGATGGGTTTTCTGTCTTaGCTCATGTTGCAGAGGCTATCCCAGAGGGACTTT | + |
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Preference number: 6 (lower is better) Translates to: TKWKLPTMGFLS*LMLQRLSQRDF Trigger: AAAGTCCCTCTGGGATAGCCTCTGCAACATGAGCCAAGACAGAAAACCCATCGTGGGGAGTTTCCACTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239485.2 |
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| CDS CAA 90 bp | GTCAGGTTGCCAAATTCCTTACACACAGGCAGTACATCAAAGTCATaGAATGAGAGGTCTAGATGCCTCAGGCTCGCCATAGGGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: VRLPNSLHTGSTSKS*NERSRCLRLAIGQQ Trigger: TTGCTGCCCTATGGCGAGCCTGAGGCATCTAGACCTCTCATTCAATGACTTTGATGTACTGCCTGTGTGTAAGGAATTTGGCAACCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CAA 90 bp | TTAGATGCAAGTGAGCAACTGGGAGCAGATCCAGTTGTCGGAACTTaGCAGCACTTAATCCCAGGAAAGTCAGCTTCGTCAGGTTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: LDASEQLGADPVVGT*QHLIPGKSASSGCQ Trigger: TTGGCAACCTGACGAAGCTGACTTTCCTGGGATTAAGTGCTGCAAAGTTCCGACAACTGGATCTGCTCCCAGTTGCTCACTTGCATCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CAA 90 bp | GGGCACACCATGTGGATGAAAGGGGTGTCTGAGATAGAGAGCATCTaGATGTTCATCTCAGCAAACACCGAGTATAGCGCCTCCTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: GHTMWMKGVSEIESI*MFISANTEYSASFE Trigger: TTCAAAGGAGGCGCTATACTCGGTGTTTGCTGAGATGAACATCAAGATGCTCTCTATCTCAGACACCCCTTTCATCCACATGGTGTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS TCA 72 bp | CTCACTAAGTCCAGAAGAATGCAGCTTAGATGCAAGTaGGCAACTGGGAGCAGATCCAGTTGTCGGAACTTT | + |
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Preference number: 6 (lower is better) Translates to: LTKSRRMQLRCK*ATGSRSSCRNF Trigger: AAAGTTCCGACAACTGGATCTGCTCCCAGTTGCTCACTTGCATCTAAGCTGCATTCTTCTGGACTTAGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS GCA 72 bp | GCCTCCTTTGAAAAGAGGAACACTTGGTTTTTGACGTaGTCTATCATCAGTGACTTCAGTGCTGTCTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: ASFEKRNTWFLT*SIISDFSAVSE Trigger: CTCGGAGACAGCACTGAAGTCACTGATGATAGAGCACGTCAAAAACCAAGTGTTCCTCTTTTCAAAGGAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CCA 72 bp | AGTTTAACCGAGCACTTCCAGGTTGTTTCTATGTGCTaGAGGGTCACATTCAATAAGGTTGGACCTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SLTEHFQVVSMC*RVTFNKVGPLV Trigger: CACCAGAGGTCCAACCTTATTGAATGTGACCCTCCAGCACATAGAAACAACCTGGAAGTGCTCGGTTAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CAA 72 bp | GCAGCACTTAATCCCAGGAAAGTCAGCTTCGTCAGGTaGCCAAATTCCTTACACACAGGCAGTACATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: AALNPRKVSFVR*PNSLHTGSTSK Trigger: CTTTGATGTACTGCCTGTGTGTAAGGAATTTGGCAACCTGACGAAGCTGACTTTCCTGGGATTAAGTGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CAA 90 bp | TCCTCATTGACTAAGGCTAACTTCATAATAAATGAAGCTCTAAGGTaGGCCCAAAACAGCCCACGTTTGCCCTTCTCAGTAGGCCATTCC | + |
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Preference number: 6 (lower is better) Translates to: SSLTKANFIINEALR*AQNSPRLPFSVGHS Trigger: GGAATGGCCTACTGAGAAGGGCAAACGTGGGCTGTTTTGGGCCAACCTTAGAGCTTCATTTATTATGAAGTTAGCCTTAGTCAATGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS TCA 72 bp | GTGACATCTTTAGGGATGCTCATTATCCTGTTGTTGTaGAGGTCAAGGACCTTGACCTTGGGAGGTAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: VTSLGMLIILLL*RSRTLTLGGKH Trigger: ATGCTTACCTCCCAAGGTCAAGGTCCTTGACCTTCACAACAACAGGATAATGAGCATCCCTAAAGATGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS GCA 72 bp | CAGCACTTAATCCCAGGAAAGTCAGCTTCGTCAGGTTaGCAAATTCCTTACACACAGGCAGTACATCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: QHLIPGKSASSG*QIPYTQAVHQS Trigger: ACTTTGATGTACTGCCTGTGTGTAAGGAATTTGGCAACCTGACGAAGCTGACTTTCCTGGGATTAAGTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CAA 72 bp | CCAAATTCCTTACACACAGGCAGTACATCAAAGTCATaGAATGAGAGGTCTAGATGCCTCAGGCTCGCCATA | + |
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Preference number: 6 (lower is better) Translates to: PNSLHTGSTSKS*NERSRCLRLAI Trigger: TATGGCGAGCCTGAGGCATCTAGACCTCTCATTCAATGACTTTGATGTACTGCCTGTGTGTAAGGAATTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CAA 90 bp | CGGAACTTTGCAGCACTTAATCCCAGGAAAGTCAGCTTCGTCAGGTaGCCAAATTCCTTACACACAGGCAGTACATCAAAGTCATTGAAT | + |
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Preference number: 6 (lower is better) Translates to: RNFAALNPRKVSFVR*PNSLHTGSTSKSLN Trigger: ATTCAATGACTTTGATGTACTGCCTGTGTGTAAGGAATTTGGCAACCTGACGAAGCTGACTTTCCTGGGATTAAGTGCTGCAAAGTTCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS GCA 72 bp | AAAAGTTTAACCGAGCACTTCCAGGTTGTTTCTATGTaGTGGAGGGTCACATTCAATAAGGTTGGACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: KSLTEHFQVVSM*WRVTFNKVGPL Trigger: CAGAGGTCCAACCTTATTGAATGTGACCCTCCAGCACATAGAAACAACCTGGAAGTGCTCGGTTAAACTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CCA 72 bp | ACAAGCTATTTGGATGAAAGACCAAATGGAGAACGGTaGTATTGGGAATCTGAAGACTTTCTGTTTCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: TSYLDERPNGER*YWESEDFLFPR Trigger: GCGGGGAAACAGAAAGTCTTCAGATTCCCAATACCACCGTTCTCCATTTGGTCTTTCATCCAAATAGCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CCA 72 bp | ACCGAGTATAGCGCCTCCTTTGAAAAGAGGAACACTTaGTTTTTGACGTGCTCTATCATCAGTGACTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: TEYSASFEKRNT*FLTCSIISDFS Trigger: ACTGAAGTCACTGATGATAGAGCACGTCAAAAACCAAGTGTTCCTCTTTTCAAAGGAGGCGCTATACTCGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS TCA 72 bp | TGTCGATTCTCTCAGTTATCGTTAAGTTGTAAATATTaGGGTACTCCACCGGTCGGGGCCAAAAGAATTGGA | + |
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Preference number: 6 (lower is better) Translates to: CRFSQLSLSCKY*GTPPVGAKRIG Trigger: TCCAATTCTTTTGGCCCCGACCGGTGGAGTACCTCAATATTTACAACTTAACGATAACTGAGAGAATCGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS TCA 72 bp | GAGGAACACTTGGTTTTTGACGTGCTCTATCATCAGTaGCTTCAGTGCTGTCTCCGAGTAAGTAAATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: EEHLVFDVLYHQ*LQCCLRVSKFF Trigger: GAAGAATTTACTTACTCGGAGACAGCACTGAAGTCACTGATGATAGAGCACGTCAAAAACCAAGTGTTCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS TCA 72 bp | GATTGTGTGAGACATCCAGGTATTCTAAGTCCTGATTaGACAAGAATACATGGAAATCAAGGCTCCGTATCC | + |
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Preference number: 6 (lower is better) Translates to: DCVRHPGILSPD*TRIHGNQGSVS Trigger: GGATACGGAGCCTTGATTTCCATGTATTCTTGTTCAATCAGGACTTAGAATACCTGGATGTCTCACACAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS TCA 72 bp | GCTGGAGGGTCACATTCAATAAGGTTGGACCTCTGGTaGGTTCTGATAAAAATGTCATTAACCTTTGACAGT | + |
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Preference number: 6 (lower is better) Translates to: AGGSHSIRLDLW*VLIKMSLTFDS Trigger: ACTGTCAAAGGTTAATGACATTTTTATCAGAACTCACCAGAGGTCCAACCTTATTGAATGTGACCCTCCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CCA 72 bp | TACAGACATGTTCACTTGAACAGAGAACAAGCTATTTaGATGAAAGACCAAATGGAGAACGGTGGTATTGGG | + |
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Preference number: 6 (lower is better) Translates to: YRHVHLNREQAI*MKDQMENGGIG Trigger: CCCAATACCACCGTTCTCCATTTGGTCTTTCATCCAAATAGCTTGTTCTCTGTTCAAGTGAACATGTCTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CAA 90 bp | CTAAAGCGTTTACAGACATGTTCACTTGAACAGAGAACAAGCTATTaGGATGAAAGACCAAATGGAGAACGGTGGTATTGGGAATCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LKRLQTCSLEQRTSY*DERPNGERWYWESE Trigger: TTCAGATTCCCAATACCACCGTTCTCCATTTGGTCTTTCATCCAAATAGCTTGTTCTCTGTTCAAGTGAACATGTCTGTAAACGCTTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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| CDS CAA 72 bp | TTACAGACATGTTCACTTGAACAGAGAACAAGCTATTaGGATGAAAGACCAAATGGAGAACGGTGGTATTGG | + |
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Preference number: 6 (lower is better) Translates to: LQTCSLEQRTSY*DERPNGERWYW Trigger: CCAATACCACCGTTCTCCATTTGGTCTTTCATCCAAATAGCTTGTTCTCTGTTCAAGTGAACATGTCTGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062315.7 ENSMUST00000239485.2 |
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