Pregenerated sensors for TLR5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079164Ensembl transcript IDs: ENSMUST00000191820.3, ENSMUST00000193687.7
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGGTCCCGTGCAGAACATGGCTGTGGTCCCCAAAAGCTGGGCCTaGAGGGTCAGAACAGGAAATAAGTGCATTCTGGCTACAGCAATG | + |
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Preference number: 1 (lower is better) Translates to: RGPVQNMAVVPKSWA*RVRTGNKCILATAM Trigger: CATTGCTGTAGCCAGAATGCACTTATTTCCTGTTCTGACCCTGCAGGCCCAGCTTTTGGGGACCACAGCCATGTTCTGCACGGGACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| 3UTR-3UTR TCA 90 bp | GGCATGAATGCCAGGTTGAGAGGTCCCGTGCAGAACATGGCTGTGGTCCCCAAATCATTGTCAGAAAAATaGCTCCAGGGAAGGACCCCC | + |
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Preference number: 2 (lower is better) Translates to: GMNARLRGPVQNMAVVPKSLSEK*LQGRTP Trigger: GGGGGTCCTTCCCTGGAGTCATTTTTCTGACAATGA...TTTGGGGACCACAGCCATGTTCTGCACGGGACCTCTCAACCTGGCATTCATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| 3UTR-3UTR TCA 90 bp | CATTCTGGCTACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTGACATCAATGGCAGGTaGGAGCCCTTAGAGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: HSGYSNGTAAICLSVQLLDINGR*EPLEAA Trigger: AGCTGCCTCTAAGGGCTCTCACCTGCCATTGATGTC...AAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| 3UTR-3UTR GCA 90 bp | TTCTGGCTACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTATGTTATCTACGATGCTTaGACTTCTGCTAGGAGGCGC | + |
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Preference number: 2 (lower is better) Translates to: FWLQQWDCCYLSICPTSYVIYDA*TSARRR Trigger: GCGCCTCCTAGCAGAAGTGCAAGCATCGTAGATAAC...ATAAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| 3UTR-3UTR GCA 90 bp | GGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTATCACTTGTGCACTTAGGCCATGTTCTACAGAGTaGTTGAATTCAGGATTCTCA | + |
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Preference number: 2 (lower is better) Translates to: GTAAICLSVQLLITCALRPCSTE*LNSGFS Trigger: TGAGAATCCTGAATTCAAGCACTCTGTAGAACATGG...CCTAAGTGCACAAGTGATAAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| 3UTR-3UTR CCA 90 bp | GTCTGTCCATGTTCTACAGAGTGCTTGAATTCAGGATTCTCAAGGCACCTGCTTTTAGAGGCAGCTTTCTaGACCTCTTACTTTCCATTT | + |
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Preference number: 2 (lower is better) Translates to: VCPCSTECLNSGFSRHLLLEAAF*TSYFPF Trigger: AAATGGAAAGTAAGAGGTCCAGAAAGCTGCCTCTAA...AAGCAGGTGCCTTGAGAATCCTGAATTCAAGCACTCTGTAGAACATGGACAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTGCTATCTGTCTATCTGTCCAACTTCTTATCACTTGTGCACTTAGGTGTGACAAAGCTCCCTGTTaGCATGAAAATCAAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: TAAICLSVQLLITCALRCDKAPC*HENQEI Trigger: AATCTCTTGATTTTCATGTCAACAGGGAGCTTTGTC...ACACCTAAGTGCACAAGTGATAAGAAGTTGGACAGATAGACAGATAGCAGCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| 3UTR CCA 72 bp | GGTCCCGTGCAGAACATGGCTGTGGTCCCCAAAAGCTaGGCCTGCAGGGTCAGAACAGGAAATAAGTGCATT | + |
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Preference number: 3 (lower is better) Translates to: GPVQNMAVVPKS*ACRVRTGNKCI Trigger: AATGCACTTATTTCCTGTTCTGACCCTGCAGGCCCAGCTTTTGGGGACCACAGCCATGTTCTGCACGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| 3UTR GCA 72 bp | GTGCAGAACATGGCTGTGGTCCCCAAAAGCTGGGCCTaGAGGGTCAGAACAGGAAATAAGTGCATTCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: VQNMAVVPKSWA*RVRTGNKCILA Trigger: AGCCAGAATGCACTTATTTCCTGTTCTGACCCTGCAGGCCCAGCTTTTGGGGACCACAGCCATGTTCTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| 3UTR CCA 72 bp | AGGGAAACCATGTCATTGGGCCTGAAAGGACATCAATaGCAGGTGAGAGCCCTTAGAGGCAGCTTTCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: RETMSLGLKGHQ*QVRALRGSFLD Trigger: GTCCAGAAAGCTGCCTCTAAGGGCTCTCACCTGCCATTGATGTCCTTTCAGGCCCAATGACATGGTTTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| 3UTR-3UTR CAA 90 bp | TCAGCAACTGGCCTCATGCCTATGGCCAGAGAAGGACCCATCTTGTCTGTCCATAGGGAAACCATGTCATaGGGCCTGAAAGGACATCAA | + |
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Preference number: 3 (lower is better) Translates to: SATGLMPMAREGPILSVHRETMS*GLKGHQ Trigger: TTGATGTCCTTTCAGGCCCAATGACATGGTTTCCCT...ATGGACAGACAAGATGGGTCCTTCTCTGGCCATAGGCATGAGGCCAGTTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| 3UTR GCA 72 bp | CAGGAAATAAGTGCATTCTGGCTACAGCAATGGGACTaGTGCTATCTGTCTATCTGTCCAACTTCTTATCAC | + |
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Preference number: 3 (lower is better) Translates to: QEISAFWLQQWD*CYLSICPTSYH Trigger: GTGATAAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAATGCACTTATTTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| 3UTR CCA 72 bp | TCAGAACAGGAAATAAGTGCATTCTGGCTACAGCAATaGGACTGCTGCTATCTGTCTATCTGTCCAACTTCT | + |
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Preference number: 3 (lower is better) Translates to: SEQEISAFWLQQ*DCCYLSICPTS Trigger: AGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAATGCACTTATTTCCTGTTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| 3UTR GCA 72 bp | GAAATAAGTGCATTCTGGCTACAGCAATGGGACTGCTaGTATCTGTCTATCTGTCCAACTTCTTATCACTTG | + |
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Preference number: 3 (lower is better) Translates to: EISAFWLQQWDC*YLSICPTSYHL Trigger: CAAGTGATAAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAATGCACTTATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR GCA 90 bp | TCAGCAACTGGCCTCATGCCTATGGCCAGAGAAGGACCCATCTTGTCTGTCCATGACACACCGTCTTCCTaGTGCCCCAGACAGCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: SATGLMPMAREGPILSVHDTPSS*CPRQPP Trigger: AGGCGGCTGTCTGGGGCAGCAGGAAGACGGTGTGTC...ATGGACAGACAAGATGGGTCCTTCTCTGGCCATAGGCATGAGGCCAGTTGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR GCA 90 bp | GACTCCAGGGAAGGACCCCCAGCGGCTGTGCGGATAAAGCGTGGAGAGTTATCTGGAAAAAGGCTATCCTaGCGTCTGAAGAACAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: DSREGPPAAVRIKRGELSGKRLS*RLKNRE Trigger: CTCCCTGTTCTTCAGACGGCAGGATAGCCTTTTTCC...AGATAACTCTCCACGCTTTATCCGCACAGCCGCTGGGGGTCCTTCCCTGGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR TCA 90 bp | CCTCAGCAACTGGCCTCATGCCTATGGCCAGAGAAGGACCCATCTTGTCTGTCCGGTTTTCCCCCGGAATaGAGTCTCTTTCTTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PQQLASCLWPEKDPSCLSGFPPE*SLFLQS Trigger: GCTTTGAAGAAAGAGACTTCATTCCGGGGGAAAACC...GGACAGACAAGATGGGTCCTTCTCTGGCCATAGGCATGAGGCCAGTTGCTGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | GTCCCCAAAAGCTGGGCCTGCAGGGTCAGAACAGGAAATAAGTGCATTCTGGCTGGATCTCTGATGTTCTaGAAGCCAAAGCCAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: VPKSWACRVRTGNKCILAGSLMF*KPKPGP Trigger: GGGTCCTGGCTTTGGCTTCCAGAACATCAGAGATCC...AGCCAGAATGCACTTATTTCCTGTTCTGACCCTGCAGGCCCAGCTTTTGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | GGGCATGAATGCCAGGTTGAGAGGTCCCGTGCAGAACATGGCTGTGGTCCCCAAAAGTTGGCAGTAAAGTaGATGTGTGGCAAATGGACC | + |
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Preference number: 4 (lower is better) Translates to: GHECQVERSRAEHGCGPQKLAVK*MCGKWT Trigger: GGTCCATTTGCCACACATCCACTTTACTGCCAACTT...TTGGGGACCACAGCCATGTTCTGCACGGGACCTCTCAACCTGGCATTCATGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR TCA 90 bp | GTCCCCAAAAGCTGGGCCTGCAGGGTCAGAACAGGAAATAAGTGCATTCTGGCTAGATGGGGCAGACCTTaGAAGGCATCTCGATTCAAG | + |
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Preference number: 4 (lower is better) Translates to: VPKSWACRVRTGNKCILARWGRP*KASRFK Trigger: CTTGAATCGAGATGCCTTTCAAGGTCTGCCCCATCT...AGCCAGAATGCACTTATTTCCTGTTCTGACCCTGCAGGCCCAGCTTTTGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR TCA 90 bp | AGCGGCTGTGCGGATAAAGCGTGGAGAGTTATCTACGATGCTTGCACTTCTGCTGAGCATCCAGGTGTTTaGGCAAAGCATTCTGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SGCADKAWRVIYDACTSAEHPGV*AKHSVP Trigger: GGGCACAGAATGCTTTGCTCAAACACCTGGATGCTC...AGCAGAAGTGCAAGCATCGTAGATAACTCTCCACGCTTTATCCGCACAGCCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR TCA 90 bp | GCGGCTGTGCGGATAAAGCGTGGAGAGTTATCTACGATGCTTGCACTTCTGCTATCATGTCTCATCAGCTaGTACTGGGACAGCGATCCC | + |
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Preference number: 4 (lower is better) Translates to: AAVRIKRGELSTMLALLLSCLIS*YWDSDP Trigger: GGGATCGCTGTCCCAGTATCAGCTGATGAGACATGA...TAGCAGAAGTGCAAGCATCGTAGATAACTCTCCACGCTTTATCCGCACAGCCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | GGGCATGAATGCCAGGTTGAGAGGTCCCGTGCAGAACATGGCTGTGGTCCCCAACCAGGACCCATGATGTaGTGTTTAAGAATCAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: GHECQVERSRAEHGCGPQPGPMM*CLRIKE Trigger: CTCTTTGATTCTTAAACACCACATCATGGGTCCTGG...TTGGGGACCACAGCCATGTTCTGCACGGGACCTCTCAACCTGGCATTCATGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR TCA 90 bp | CCTGCAGGGTCAGAACAGGAAATAAGTGCATTCTGGCTACAGCAATGGGACTGCGGCTATCCTGCCGTCTaGAGAACAGGGAGATATTAC | + |
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Preference number: 4 (lower is better) Translates to: PAGSEQEISAFWLQQWDCGYPAV*RTGRYY Trigger: GTAATATCTCCCTGTTCTTCAGACGGCAGGATAGCC...GCAGTCCCATTGCTGTAGCCAGAATGCACTTATTTCCTGTTCTGACCCTGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR TCA 90 bp | CCTCAGCAACTGGCCTCATGCCTATGGCCAGAGAAGGACCCATCTTGTCTGTCCCTGAATGTTTGGTCTTaGATGATCCCAATGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: PQQLASCLWPEKDPSCLSLNVWS*MIPMWF Trigger: GAACCACATTGGGATCATTCAAGACCAAACATTCAG...GGACAGACAAGATGGGTCCTTCTCTGGCCATAGGCATGAGGCCAGTTGCTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR GCA 90 bp | GAATGCCAGGTTGAGAGGTCCCGTGCAGAACATGGCTGTGGTCCCCAAAAGCTGAAGTACTGTTGCTTTTaGAGAAACCCTCTGATGGTC | + |
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Preference number: 4 (lower is better) Translates to: ECQVERSRAEHGCGPQKLKYCCF*RNPLMV Trigger: GACCATCAGAGGGTTTCTGCAAAAGCAACAGTACTT...CAGCTTTTGGGGACCACAGCCATGTTCTGCACGGGACCTCTCAACCTGGCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | ATGCCTATGGCCAGAGAAGGACCCATCTTGTCTGTCCATGTTCTACAGAGTGCTAACTTCTGGCCAGGCTaGCAAATGTGCTCTGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: MPMAREGPILSVHVLQSANFWPG*QMCSGQ Trigger: CTGACCAGAGCACATTTGCCAGCCTGGCCAGAAGTT...AGCACTCTGTAGAACATGGACAGACAAGATGGGTCCTTCTCTGGCCATAGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | CCTCAGCAACTGGCCTCATGCCTATGGCCAGAGAAGGACCCATCTTGTCTGTCCTGGTTCGCAACTGGATaGAACTGCTTCTTTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: PQQLASCLWPEKDPSCLSWFATG*NCFFSF Trigger: GAAAGAAAAGAAGCAGTTCCATCCAGTTGCGAACCA...GGACAGACAAGATGGGTCCTTCTCTGGCCATAGGCATGAGGCCAGTTGCTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| 3UTR CAA 72 bp | AGACAGTACGCAATAGGATGGAGGGAAACCATGTCATaGGGCCTGAAAGGACATCAATGGCAGGTGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RQYAIGWRETMS*GLKGHQWQVRA Trigger: GGCTCTCACCTGCCATTGATGTCCTTTCAGGCCCAATGACATGGTTTCCCTCCATCCTATTGCGTACTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR TCA 90 bp | CATTCTGGCTACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTGATTGGGCAGGTTTCTaGAAGCCCCTGGACCAATGG | + |
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Preference number: 4 (lower is better) Translates to: HSGYSNGTAAICLSVQLLDWAGF*KPLDQW Trigger: CCATTGGTCCAGGGGCTTTCAGAAACCTGCCCAATC...AAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR TCA 90 bp | TGGGCCTGCAGGGTCAGAACAGGAAATAAGTGCATTCTGGCTACAGCAATGGGAGATTCTGATTCAAGATaGGAAACTGGAGCTGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: WACRVRTGNKCILATAMGDSDSR*ETGAGG Trigger: TCCCCCAGCTCCAGTTTCTCATCTTGAATCAGAATC...TCCCATTGCTGTAGCCAGAATGCACTTATTTCCTGTTCTGACCCTGCAGGCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | TCAGCAACTGGCCTCATGCCTATGGCCAGAGAAGGACCCATCTTGTCTGTCCATCACTTAACACAGCACTaGAGAGTCCACAGGAAAACA | + |
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Preference number: 4 (lower is better) Translates to: SATGLMPMAREGPILSVHHLTQH*RVHRKT Trigger: TGTTTTCCTGTGGACTCTCCAGTGCTGTGTTAAGTG...ATGGACAGACAAGATGGGTCCTTCTCTGGCCATAGGCATGAGGCCAGTTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | ACTGCTGCTATCTGTCTATCTGTCCAACTTCTTATCACTTGTGCACTTAGGTGTGACAGACTCCGGCTCTaGGCATACCTGAAGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TAAICLSVQLLITCALRCDRLRL*AYLKAS Trigger: GGAGGCCTTCAGGTATGCCCAGAGCCGGAGTCTGTC...ACACCTAAGTGCACAAGTGATAAGAAGTTGGACAGATAGACAGATAGCAGCAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR TCA 90 bp | GGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTATCACTTGTGCACTTAGGAGGCGGGAAAGGCCTTaGAAAACATCCCAACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GTAAICLSVQLLITCALRRRERP*KTSQQR Trigger: CCTCTGTTGGGATGTTTTTCAAGGCCTTTCCCGCCT...CCTAAGTGCACAAGTGATAAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR TCA 90 bp | CATTCTGGCTACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTTCCAGACCTTGTCCTTaGACACCAGCTTCTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: HSGYSNGTAAICLSVQLLSRPCP*TPASGW Trigger: CCATCCAGAAGCTGGTGTTCAAGGACAAGGTCTGGA...AAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR GCA 90 bp | CATTCTGGCTACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTGTCTCCCAGGCCAGCTaGAGCATATTCTCTGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: HSGYSNGTAAICLSVQLLVSQAS*SIFSVR Trigger: CCTTACAGAGAATATGCTGCAGCTGGCCTGGGAGAC...AAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | ATTCTGGCTACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTAATGAGAAACTGGAGCTaGGGGACTCGCAGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: ILATAMGLLLSVYLSNFLMRNWS*GTRRRK Trigger: CTTCCTCCTGCGAGTCCCCCAGCTCCAGTTTCTCAT...TAAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | CCTGCAGGGTCAGAACAGGAAATAAGTGCATTCTGGCTACAGCAATGGGACTGCACACCAGCTTCTGGATaGTCTTATAGCACAGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: PAGSEQEISAFWLQQWDCTPASG*SYSTGN Trigger: GTTTCCTGTGCTATAAGACCATCCAGAAGCTGGTGT...GCAGTCCCATTGCTGTAGCCAGAATGCACTTATTTCCTGTTCTGACCCTGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | ATTCTGGCTACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTAAACCAGCCAACATCCTaGAGGTCTTCAGGCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: ILATAMGLLLSVYLSNFLNQPTS*RSSGHL Trigger: GAGGTGGCCTGAAGACCTCCAGGATGTTGGCTGGTT...TAAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR TCA 90 bp | AGCAACTGGCCTCATGCCTATGGCCAGAGAAGGACCCATCTTGTCTGTCCATGTATGTTTGGTCTTGAATaGTCCCAATGTGGTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: SNWPHAYGQRRTHLVCPCMFGLE*SQCGSF Trigger: AAAGGAACCACATTGGGATCATTCAAGACCAAACAT...ACATGGACAGACAAGATGGGTCCTTCTCTGGCCATAGGCATGAGGCCAGTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR TCA 90 bp | ATAAAGCGTGGAGAGTTATCTACGATGCTTGCACTTCTGCTAGGAGGCGCTCCTGACGAAAGGCGATTCTaGTTCAAGATGAGAAACTGG | + |
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Preference number: 4 (lower is better) Translates to: IKRGELSTMLALLLGGAPDERRF*FKMRNW Trigger: CCAGTTTCTCATCTTGAATCAGAATCGCCTTTCGTC...AGGAGCGCCTCCTAGCAGAAGTGCAAGCATCGTAGATAACTCTCCACGCTTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR TCA 90 bp | TGGCTACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTATCACCTTCAAAGCATAGCCTaGGCCTGTTTCGGGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: WLQQWDCCYLSICPTSYHLQSIA*ACFGNC Trigger: ACAGTTCCCGAAACAGGCTCAGGCTATGCTTTGAAG...GTGATAAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR GCA 90 bp | GTCTGTCCATGTTCTACAGAGTGCTTGAATTCAGGATTCTCAAGGCACCTGCTTGGCTGTGAATCTGGTTaGCAGATAGGTCTAAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: VCPCSTECLNSGFSRHLLGCESG*QIGLSE Trigger: CTCGCTTAGACCTATCTGGCAACCAGATTCACAGCC...AAGCAGGTGCCTTGAGAATCCTGAATTCAAGCACTCTGTAGAACATGGACAGAC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR GCA 90 bp | ATGAATGCCAGGTTGAGAGGTCCCGTGCAGAACATGGCTGTGGTCCCCAAAAGCTTTCTTCCTTTAGAATaGATCCGGAGAGTTTATCGA | + |
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Preference number: 4 (lower is better) Translates to: MNARLRGPVQNMAVVPKSFLPLE*IRRVYR Trigger: TCGATAAACTCTCCGGATGCATTCTAAAGGAAGAAA...GCTTTTGGGGACCACAGCCATGTTCTGCACGGGACCTCTCAACCTGGCATTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | TGGCTACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTATCACTGGATGTGTGGCAAATaGACCAGCTTATTGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: WLQQWDCCYLSICPTSYHWMCGK*TSLLPP Trigger: GGGAGGCAATAAGCTGGTCCATTTGCCACACATCCA...GTGATAAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | TTCTGGCTACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTATTTCAAGATGAGAAACTaGAGCTGGGGGACTCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: FWLQQWDCCYLSICPTSYFKMRN*SWGTRR Trigger: CCTGCGAGTCCCCCAGCTCCAGTTTCTCATCTTGAA...ATAAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR TCA 90 bp | TTTCATTGTCAGAAAAATGACTCCAGGGAAGGACCCCCAGCGGCTGTGCGGATATCTTGTTTATCTTGTTaGAGGCAAGGTTCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: FHCQKNDSREGPPAAVRISCLSC*RQGSAS Trigger: AGATGCTGAACCTTGCCTTCAACAAGATAAACAAGA...TATCCGCACAGCCGCTGGGGGTCCTTCCCTGGAGTCATTTTTCTGACAATGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | GCGGCTGTGCGGATAAAGCGTGGAGAGTTATCTACGATGCTTGCACTTCTGCTAGACCATCTGTATGCTTaGAATAAAACCAATGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AAVRIKRGELSTMLALLLDHLYA*NKTNGL Trigger: AAGGCCATTGGTTTTATTCCAAGCATACAGATGGTC...TAGCAGAAGTGCAAGCATCGTAGATAACTCTCCACGCTTTATCCGCACAGCCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | ATTCTCAAGGCACCTGCTTTTGAACTGAACAGCACAGAAAGCATGAAGCTGCCTGAAATCTGGCTTCCCTaGATGATGTTGCTGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILKAPAFELNSTESMKLPEIWLP*MMLLKF Trigger: GAACTTCAGCAACATCATCCAGGGAAGCCAGATTTC...AGGCAGCTTCATGCTTTCTGTGCTGTTCAGTTCAAAAGCAGGTGCCTTGAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | GGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTATCACTTGTGCACTTAGGAGGGTGACGTTGGTTTaGTTGAGCCAGGAGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTAAICLSVQLLITCALRRVTLV*LSQEIK Trigger: TTTTATCTCCTGGCTCAACCAAACCAACGTCACCCT...CCTAAGTGCACAAGTGATAAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR GCA 90 bp | ACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTATCACTTGTGCACCTCAAGTACTGTTaGTTTTGCAGAAACCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAMGLLLSVYLSNFLSLVHLKYC*FCRNPL Trigger: CAGAGGGTTTCTGCAAAAGCAACAGTACTTGAGGTG...CACAAGTGATAAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | GTCTGTCCATGTTCTACAGAGTGCTTGAATTCAGGATTCTCAAGGCACCTGCTTGAAGCCCATAGAAGTTaGAATTATAGAGTTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VCPCSTECLNSGFSRHLLEAHRS*NYRVPP Trigger: TGGGGGAACTCTATAATTCCAACTTCTATGGGCTTC...AAGCAGGTGCCTTGAGAATCCTGAATTCAAGCACTCTGTAGAACATGGACAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR TCA 90 bp | ATTCTCAAGGCACCTGCTTTTGAACTGAACAGCACAGAAAGCATGAAGCTGCCTTCAGGAGAGAAAAGCTaGTTTCTAGATATGTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILKAPAFELNSTESMKLPSGEKS*FLDMSR Trigger: TCTCGACATATCTAGAAATCAGCTTTTCTCTCCTGA...AGGCAGCTTCATGCTTTCTGTGCTGTTCAGTTCAAAAGCAGGTGCCTTGAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CCA 90 bp | ATTCTGGCTACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTAAGTAAAGTGGATGTGTaGCAAATGGACCAGCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: ILATAMGLLLSVYLSNFLSKVDV*QMDQLI Trigger: AATAAGCTGGTCCATTTGCCACACATCCACTTTACT...TAAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS GCA 90 bp | CATCCTTCAGGAAGTGTCTGCTCACTAGACACACCGTCTTCCTGCTaGCCCAGACAGCCGCCTGGATGTTGGAGATATGGTTTTCCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: HPSGSVCSLDTPSSC*PRQPPGCWRYGFPP Trigger: CGGGGGAAAACCATATCTCCAACATCCAGGCGGCTGTCTGGGGCAGCAGGAAGACGGTGTGTCTAGTGAGCAGACACTTCCTGAAGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 90 bp | GGCAGGTTTCTGAAAGCCCCTGGACCAATGGTCAAGTTAGCATACTaGGTCCCCAGCTCCAGCAACTGGAGCCGCTCCAGGAGTGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GRFLKAPGPMVKLAY*VPSSSNWSRSRSGN Trigger: ATTTCCACTCCTGGAGCGGCTCCAGTTGCTGGAGCTGGGGACCCAGTATGCTAACTTGACCATTGGTCCAGGGGCTTTCAGAAACCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS TCA 90 bp | CTGGGTCCCCAGCTCCAGCAACTGGAGCCGCTCCAGGAGTGGAAATaGTGTGGCAACCACCATACTGATATAGTTGAAGCTGAGCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LGPQLQQLEPLQEWK*CGNHHTDIVEAEQE Trigger: CTCCTGCTCAGCTTCAACTATATCAGTATGGTGGTTGCCACATCATTTCCACTCCTGGAGCGGCTCCAGTTGCTGGAGCTGGGGACCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS TCA 90 bp | GAGTGTGGGCTGCCTTGCATGACGAAAGGCGATTCTGATTCAAGATaGGAAACTGGAGCTGGGGGACTCGCAGGAGGAAGTAGAGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ECGLPCMTKGDSDSR*ETGAGGLAGGSRGR Trigger: CCGACCTCTACTTCCTCCTGCGAGTCCCCCAGCTCCAGTTTCTCATCTTGAATCAGAATCGCCTTTCGTCATGCAAGGCAGCCCACACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS GCA 90 bp | AACCATCCTTCAGGAAGTGTCTGCTCACTAGACACACCGTCTTCCTaGTGCCCCAGACAGCCGCCTGGATGTTGGAGATATGGTTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: NHPSGSVCSLDTPSS*CPRQPPGCWRYGFP Trigger: GGGAAAACCATATCTCCAACATCCAGGCGGCTGTCTGGGGCAGCAGGAAGACGGTGTGTCTAGTGAGCAGACACTTCCTGAAGGATGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS-3UTR CAA 90 bp | TTTCATTGTCAGAAAAATGACTCCAGGGAAGGACCCCCAGCGGCTGTGCGGATACCGAACAGGGTGACGTaGGTTTGGTTGAGCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FHCQKNDSREGPPAAVRIPNRVT*VWLSQE Trigger: CTCCTGGCTCAACCAAACCAACGTCACCCTGTTCGG...TATCCGCACAGCCGCTGGGGGTCCTTCCCTGGAGTCATTTTTCTGACAATGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS GCA 90 bp | AGTCGAGGATTCAAGGAGAAGATAAAGCCGTGCGAAAGGTCCAGTTaGAGCACCGAACTTCTGGCCAGGCTGGCAAATGTGCTCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRGFKEKIKPCERSS*STELLARLANVLWS Trigger: TGACCAGAGCACATTTGCCAGCCTGGCCAGAAGTTCGGTGCTGCAACTGGACCTTTCGCACGGCTTTATCTTCTCCTTGAATCCTCGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS GCA 90 bp | TTCAGTGTCCCAAACAGTCGAGGATTCAAGGAGAAGATAAAGCCGTaGGAAAGGTCCAGTTGCAGCACCGAACTTCTGGCCAGGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSVPNSRGFKEKIKP*ERSSCSTELLARLA Trigger: TGCCAGCCTGGCCAGAAGTTCGGTGCTGCAACTGGACCTTTCGCACGGCTTTATCTTCTCCTTGAATCCTCGACTGTTTGGGACACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 90 bp | CTGAGCAGGAGCCTCTCAGTGGTAGTATTGAGGATCCAGGGAATCTaGGTGAGGTTACAGCCTCGGAAAAAGGCTATCCTGCCGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LSRSLSVVVLRIQGI*VRLQPRKKAILPSE Trigger: TTCAGACGGCAGGATAGCCTTTTTCCGAGGCTGTAACCTCACCCAGATTCCCTGGATCCTCAATACTACCACTGAGAGGCTCCTGCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 90 bp | GCCCAAGTCCAAGATCCTAAGATTGGGCAGGTTTCTGAAAGCCCCTaGACCAATGGTCAAGTTAGCATACTGGGTCCCCAGCTCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: AQVQDPKIGQVSESP*TNGQVSILGPQLQQ Trigger: TTGCTGGAGCTGGGGACCCAGTATGCTAACTTGACCATTGGTCCAGGGGCTTTCAGAAACCTGCCCAATCTTAGGATCTTGGACTTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS-3UTR CAA 90 bp | AGCAACTGGCCTCATGCCTATGGCCAGAGAAGGACCCATCTTGTCTGTCCATGTGACTTCGATCTGGCTTaGGCCCAAGTCCAAGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SNWPHAYGQRRTHLVCPCDFDLA*AQVQDP Trigger: AGGATCTTGGACTTGGGCCAAAGCCAGATCGAAGTC...ACATGGACAGACAAGATGGGTCCTTCTCTGGCCATAGGCATGAGGCCAGTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CAA 90 bp | TCAGCAACTGGCCTCATGCCTATGGCCAGAGAAGGACCCATCTTGTCTGTCCATGAGGCGGGAAAGGCCTaGAAAAACATCCCAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SATGLMPMAREGPILSVHEAGKA*KNIPTE Trigger: CTCTGTTGGGATGTTTTTCAAGGCCTTTCCCGCCTC...ATGGACAGACAAGATGGGTCCTTCTCTGGCCATAGGCATGAGGCCAGTTGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS TCA 90 bp | AATCTGGGTGAGGTTACAGCCTCGGAAAAAGGCTATCCTGCCGTCTaGAGAACAGGGAGATATTACCAACACGGGGCTGGCCATGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: NLGEVTASEKGYPAV*RTGRYYQHGAGHED Trigger: ATCTTCATGGCCAGCCCCGTGTTGGTAATATCTCCCTGTTCTTCAGACGGCAGGATAGCCTTTTTCCGAGGCTGTAACCTCACCCAGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS TCA 90 bp | TGTTGCTTTTGCAGAAACCCTCTGATGGTCTCATGTCTCATCAGCTaGTACTGGGACAGCGATCCCACCACCACCACGATGAGAATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CCFCRNPLMVSCLIS*YWDSDPTTTTMRML Trigger: GAGCATTCTCATCGTGGTGGTGGTGGGATCGCTGTCCCAGTATCAGCTGATGAGACATGAGACCATCAGAGGGTTTCTGCAAAAGCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS TCA 90 bp | GGTCTTCAGGCCACCTCAAGTACTGTTGCTTTTGCAGAAACCCTCTaGTGGTCTCATGTCTCATCAGCTGATACTGGGACAGCGATCCCA | + |
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Preference number: 5 (lower is better) Translates to: GLQATSSTVAFAETL*WSHVSSADTGTAIP Trigger: TGGGATCGCTGTCCCAGTATCAGCTGATGAGACATGAGACCATCAGAGGGTTTCTGCAAAAGCAACAGTACTTGAGGTGGCCTGAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 90 bp | CTGGCCAGGCTGGCAAATGTGCTCTGGTCAGGATCTCTGATGTTCTaGAAGCCAAAGCCAGGACCCATGATGTGGTGTTTAAGAATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LARLANVLWSGSLMF*KPKPGPMMWCLRIK Trigger: TTTGATTCTTAAACACCACATCATGGGTCCTGGCTTTGGCTTCCAGAACATCAGAGATCCTGACCAGAGCACATTTGCCAGCCTGGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 90 bp | ATGCAATACACGTCTGCAGGAGAGCCGAACAGGGTGACGTTGGTTTaGTTGAGCCAGGAGATAAAAGTGCTAAGTTCACAGTTGCAGACG | + |
|
Preference number: 5 (lower is better) Translates to: MQYTSAGEPNRVTLV*LSQEIKVLSSQLQT Trigger: CGTCTGCAACTGTGAACTTAGCACTTTTATCTCCTGGCTCAACCAAACCAACGTCACCCTGTTCGGCTCTCCTGCAGACGTGTATTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS-3UTR CAA 90 bp | GGCATGAATGCCAGGTTGAGAGGTCCCGTGCAGAACATGGCTGTGGTCCCCAAAAACAGCTTAGTTAATTaGAGGCCAAAGAAAGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: GMNARLRGPVQNMAVVPKNSLVN*RPKKDS Trigger: ACTGTCTTTCTTTGGCCTCAAATTAACTAAGCTGTT...TTTGGGGACCACAGCCATGTTCTGCACGGGACCTCTCAACCTGGCATTCATGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CAA 90 bp | ATGAATGCCAGGTTGAGAGGTCCCGTGCAGAACATGGCTGTGGTCCCCAAAAGCATCTTGTTTATCTTGTaGAAGGCAAGGTTCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: MNARLRGPVQNMAVVPKSILFIL*KARFSI Trigger: GATGCTGAACCTTGCCTTCAACAAGATAAACAAGAT...GCTTTTGGGGACCACAGCCATGTTCTGCACGGGACCTCTCAACCTGGCATTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS CCA 90 bp | CCCATGATGTGGTGTTTAAGAATCAAAGAGGAAATCTGGCTTCCCTaGATGATGTTGCTGAAGTTCCTTGTGATGTCCACCGTCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PMMWCLRIKEEIWLP*MMLLKFLVMSTVQP Trigger: TGGCTGGACGGTGGACATCACAAGGAACTTCAGCAACATCATCCAGGGAAGCCAGATTTCCTCTTTGATTCTTAAACACCACATCATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 90 bp | TCAGATAACTCTAGGAAGTTGGCAGTAAAGTGGATGTGTGGCAAATaGACCAGCTTATTGCCTCCCAGGAGGACCATCTGTATGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SDNSRKLAVKWMCGK*TSLLPPRRTICMLG Trigger: TCCAAGCATACAGATGGTCCTCCTGGGAGGCAATAAGCTGGTCCATTTGCCACACATCCACTTTACTGCCAACTTCCTAGAGTTATCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS-3UTR CAA 90 bp | GTCTGTCCATGTTCTACAGAGTGCTTGAATTCAGGATTCTCAAGGCACCTGCTTCTCTCAGTGGTAGTATaGAGGATCCAGGGAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VCPCSTECLNSGFSRHLLLSVVV*RIQGIW Trigger: CCAGATTCCCTGGATCCTCAATACTACCACTGAGAG...AAGCAGGTGCCTTGAGAATCCTGAATTCAAGCACTCTGTAGAACATGGACAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CAA 90 bp | CATTCTGGCTACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTGAGATGGGGCAGACCTaGAAAGGCATCTCGATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: HSGYSNGTAAICLSVQLLEMGQT*KGISIQ Trigger: TTGAATCGAGATGCCTTTCAAGGTCTGCCCCATCTC...AAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CAA 90 bp | ATTCTGGCTACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTACTCCAGACCTTGTCCTaGAACACCAGCTTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ILATAMGLLLSVYLSNFLLQTLS*NTSFWM Trigger: CATCCAGAAGCTGGTGTTCAAGGACAAGGTCTGGAG...TAAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS CCA 90 bp | TCAGGATCTCTGATGTTCTGGAAGCCAAAGCCAGGACCCATGATGTaGTGTTTAAGAATCAAAGAGGAAATCTGGCTTCCCTGGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: SGSLMFWKPKPGPMM*CLRIKEEIWLPWMM Trigger: CATCATCCAGGGAAGCCAGATTTCCTCTTTGATTCTTAAACACCACATCATGGGTCCTGGCTTTGGCTTCCAGAACATCAGAGATCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 90 bp | TTTAGAATGCATCCGGAGAGTTTATCGAGAAACCAGCCAACATCCTaGAGGTCTTCAGGCCACCTCAAGTACTGTTGCTTTTGCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FRMHPESLSRNQPTS*RSSGHLKYCCFCRN Trigger: GTTTCTGCAAAAGCAACAGTACTTGAGGTGGCCTGAAGACCTCCAGGATGTTGGCTGGTTTCTCGATAAACTCTCCGGATGCATTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS-3UTR CAA 90 bp | AGCGGCTGTGCGGATAAAGCGTGGAGAGTTATCTACGATGCTTGCACTTCTGCTGCATTCTCTCCAATCTaGTTTATCTTGTTGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGCADKAWRVIYDACTSAAFSPI*FILLKA Trigger: TGCCTTCAACAAGATAAACAAGATTGGAGAGAATGC...AGCAGAAGTGCAAGCATCGTAGATAACTCTCCACGCTTTATCCGCACAGCCGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CAA 90 bp | CATTCTGGCTACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTCCACCTCAAGTACTGTaGCTTTTGCAGAAACCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSGYSNGTAAICLSVQLLPPQVL*LLQKPS Trigger: AGAGGGTTTCTGCAAAAGCAACAGTACTTGAGGTGG...AAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS-3UTR CAA 90 bp | ACTGCTGCTATCTGTCTATCTGTCCAACTTCTTATCACTTGTGCACTTAGGTGTCAGGGTGACGTTGGTTaGGTTGAGCCAGGAGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: TAAICLSVQLLITCALRCQGDVG*VEPGDK Trigger: TTTATCTCCTGGCTCAACCAAACCAACGTCACCCTG...ACACCTAAGTGCACAAGTGATAAGAAGTTGGACAGATAGACAGATAGCAGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS GCA 90 bp | TTCAAAGTCTTTGCTGCTGAAGCAGAAGTAGGCATCATATCTATATaGACCAGGTTCCAAACTCCAGACCTTGTCCTTGAACACCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FKVFAAEAEVGIISI*TRFQTPDLVLEHQL Trigger: AAGCTGGTGTTCAAGGACAAGGTCTGGAGTTTGGAACCTGGTGCATATAGATATGATGCCTACTTCTGCTTCAGCAGCAAAGACTTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS-3UTR CAA 90 bp | ATTCTGGCTACAGCAATGGGACTGCTGCTATCTGTCTATCTGTCCAACTTCTTACCAATCTTGTTTATCTaGTTGAAGGCAAGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ILATAMGLLLSVYLSNFLPILFI*LKARFS Trigger: GCTGAACCTTGCCTTCAACAAGATAAACAAGATTGG...TAAGAAGTTGGACAGATAGACAGATAGCAGCAGTCCCATTGCTGTAGCCAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191820.3 |
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| CDS TCA 90 bp | TGTCAAGCCCATAAAAGGCATTCTCTCCAATCTTGTTTATCTTGTTaGAGGCAAGGTTCAGCATCTTCAAATCCTTCAGTGTCCCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: CQAHKRHSLQSCLSC*RQGSASSNPSVSQT Trigger: TGTTTGGGACACTGAAGGATTTGAAGATGCTGAACCTTGCCTTCAACAAGATAAACAAGATTGGAGAGAATGCCTTTTATGGGCTTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS GCA 72 bp | AGGCCTCCAGGCACCAACCATCCTTCAGGAAGTGTCTaGTCACTAGACACACCGTCTTCCTGCTGCCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RPPGTNHPSGSV*SLDTPSSCCPR Trigger: TCTGGGGCAGCAGGAAGACGGTGTGTCTAGTGAGCAGACACTTCCTGAAGGATGGTTGGTGCCTGGAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 72 bp | AGCCGTGCGAAAGGTCCAGTTGCAGCACCGAACTTCTaGCCAGGCTGGCAAATGTGCTCTGGTCAGGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: SRAKGPVAAPNF*PGWQMCSGQDL Trigger: GAGATCCTGACCAGAGCACATTTGCCAGCCTGGCCAGAAGTTCGGTGCTGCAACTGGACCTTTCGCACGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 72 bp | GACAGCGATCCCACCACCACCACGATGAGAATGCTCTaGAGGTCAGACAGACTCCGGCTCTGGGCATACCTG | + |
|
Preference number: 6 (lower is better) Translates to: DSDPTTTTMRML*RSDRLRLWAYL Trigger: CAGGTATGCCCAGAGCCGGAGTCTGTCTGACCTCAAGAGCATTCTCATCGTGGTGGTGGTGGGATCGCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS GCA 72 bp | GGAAGTGTCTGCTCACTAGACACACCGTCTTCCTGCTaGCCCAGACAGCCGCCTGGATGTTGGAGATATGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSVCSLDTPSSC*PRQPPGCWRYG Trigger: ACCATATCTCCAACATCCAGGCGGCTGTCTGGGGCAGCAGGAAGACGGTGTGTCTAGTGAGCAGACACTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 72 bp | GTCAAGTTAGCATACTGGGTCCCCAGCTCCAGCAACTaGAGCCGCTCCAGGAGTGGAAATGATGTGGCAACC | + |
|
Preference number: 6 (lower is better) Translates to: VKLAYWVPSSSN*SRSRSGNDVAT Trigger: GGTTGCCACATCATTTCCACTCCTGGAGCGGCTCCAGTTGCTGGAGCTGGGGACCCAGTATGCTAACTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 90 bp | CAGTCGAGGATTCAAGGAGAAGATAAAGCCGTGCGAAAGGTCCAGTaGCAGCACCGAACTTCTGGCCAGGCTGGCAAATGTGCTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QSRIQGEDKAVRKVQ*QHRTSGQAGKCALV Trigger: GACCAGAGCACATTTGCCAGCCTGGCCAGAAGTTCGGTGCTGCAACTGGACCTTTCGCACGGCTTTATCTTCTCCTTGAATCCTCGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 72 bp | AGCACCGAACTTCTGGCCAGGCTGGCAAATGTGCTCTaGTCAGGATCTCTGATGTTCTGGAAGCCAAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: STELLARLANVL*SGSLMFWKPKP Trigger: TGGCTTTGGCTTCCAGAACATCAGAGATCCTGACCAGAGCACATTTGCCAGCCTGGCCAGAAGTTCGGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS TCA 72 bp | GCTTGGGTTCTCCGAGGGAGTGTGGGCTGCCTTGCATaGCGAAAGGCGATTCTGATTCAAGATGAGAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: AWVLRGSVGCLA*RKAILIQDEKL Trigger: CAGTTTCTCATCTTGAATCAGAATCGCCTTTCGTCATGCAAGGCAGCCCACACTCCCTCGGAGAACCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS GCA 72 bp | TTCAAGGAGAAGATAAAGCCGTGCGAAAGGTCCAGTTaGAGCACCGAACTTCTGGCCAGGCTGGCAAATGTG | + |
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Preference number: 6 (lower is better) Translates to: FKEKIKPCERSS*STELLARLANV Trigger: CACATTTGCCAGCCTGGCCAGAAGTTCGGTGCTGCAACTGGACCTTTCGCACGGCTTTATCTTCTCCTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS GCA 72 bp | CCAAACAGTCGAGGATTCAAGGAGAAGATAAAGCCGTaGGAAAGGTCCAGTTGCAGCACCGAACTTCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: PNSRGFKEKIKP*ERSSCSTELLA Trigger: GGCCAGAAGTTCGGTGCTGCAACTGGACCTTTCGCACGGCTTTATCTTCTCCTTGAATCCTCGACTGTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 72 bp | TCGATCTGGCTTTGGCCCAAGTCCAAGATCCTAAGATaGGGCAGGTTTCTGAAAGCCCCTGGACCAATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SIWLWPKSKILR*GRFLKAPGPMV Trigger: GACCATTGGTCCAGGGGCTTTCAGAAACCTGCCCAATCTTAGGATCTTGGACTTGGGCCAAAGCCAGATCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 72 bp | ATTACTCAGGTAAAGAATCTGGAGGCGGGAAAGGCCTaGAAAAACATCCCAACAGAGGCCGGTCTCCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ITQVKNLEAGKA*KNIPTEAGLPG Trigger: GCCTGGGAGACCGGCCTCTGTTGGGATGTTTTTCAAGGCCTTTCCCGCCTCCAGATTCTTTACCTGAGTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 90 bp | AAGGTAGTTATTACTCAGGTAAAGAATCTGGAGGCGGGAAAGGCCTaGAAAAACATCCCAACAGAGGCCGGTCTCCCAGGCCAGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: KVVITQVKNLEAGKA*KNIPTEAGLPGQLQ Trigger: CTGCAGCTGGCCTGGGAGACCGGCCTCTGTTGGGATGTTTTTCAAGGCCTTTCCCGCCTCCAGATTCTTTACCTGAGTAATAACTACCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS TCA 72 bp | CAGCTCCAGCAACTGGAGCCGCTCCAGGAGTGGAAATaGTGTGGCAACCACCATACTGATATAGTTGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: QLQQLEPLQEWK*CGNHHTDIVEA Trigger: AGCTTCAACTATATCAGTATGGTGGTTGCCACATCATTTCCACTCCTGGAGCGGCTCCAGTTGCTGGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 72 bp | CAAGATCCTAAGATTGGGCAGGTTTCTGAAAGCCCCTaGACCAATGGTCAAGTTAGCATACTGGGTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QDPKIGQVSESP*TNGQVSILGPQ Trigger: CTGGGGACCCAGTATGCTAACTTGACCATTGGTCCAGGGGCTTTCAGAAACCTGCCCAATCTTAGGATCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 72 bp | ATTCAAGGAGAAGATAAAGCCGTGCGAAAGGTCCAGTaGCAGCACCGAACTTCTGGCCAGGCTGGCAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: IQGEDKAVRKVQ*QHRTSGQAGKC Trigger: ACATTTGCCAGCCTGGCCAGAAGTTCGGTGCTGCAACTGGACCTTTCGCACGGCTTTATCTTCTCCTTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 90 bp | GGGCAGACCTTGAAAGGCATCTCGATTCAAGACTTCGATCTGGCTTaGGCCCAAGTCCAAGATCCTAAGATTGGGCAGGTTTCTGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GQTLKGISIQDFDLA*AQVQDPKIGQVSES Trigger: GCTTTCAGAAACCTGCCCAATCTTAGGATCTTGGACTTGGGCCAAAGCCAGATCGAAGTCTTGAATCGAGATGCCTTTCAAGGTCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 90 bp | CATGCAATACACGTCTGCAGGAGAGCCGAACAGGGTGACGTTGGTTaGGTTGAGCCAGGAGATAAAAGTGCTAAGTTCACAGTTGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HAIHVCRRAEQGDVG*VEPGDKSAKFTVAD Trigger: GTCTGCAACTGTGAACTTAGCACTTTTATCTCCTGGCTCAACCAAACCAACGTCACCCTGTTCGGCTCTCCTGCAGACGTGTATTGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 90 bp | GGGTACATGCAATACACGTCTGCAGGAGAGCCGAACAGGGTGACGTaGGTTTGGTTGAGCCAGGAGATAAAAGTGCTAAGTTCACAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GYMQYTSAGEPNRVT*VWLSQEIKVLSSQL Trigger: CAACTGTGAACTTAGCACTTTTATCTCCTGGCTCAACCAAACCAACGTCACCCTGTTCGGCTCTCCTGCAGACGTGTATTGCATGTACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 90 bp | GCCAACATCCTGGAGGTCTTCAGGCCACCTCAAGTACTGTTGCTTTaGCAGAAACCCTCTGATGGTCTCATGTCTCATCAGCTGATACTG | + |
|
Preference number: 6 (lower is better) Translates to: ANILEVFRPPQVLLL*QKPSDGLMSHQLIL Trigger: CAGTATCAGCTGATGAGACATGAGACCATCAGAGGGTTTCTGCAAAAGCAACAGTACTTGAGGTGGCCTGAAGACCTCCAGGATGTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 90 bp | AAACCAGCCAACATCCTGGAGGTCTTCAGGCCACCTCAAGTACTGTaGCTTTTGCAGAAACCCTCTGATGGTCTCATGTCTCATCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KPANILEVFRPPQVL*LLQKPSDGLMSHQL Trigger: CAGCTGATGAGACATGAGACCATCAGAGGGTTTCTGCAAAAGCAACAGTACTTGAGGTGGCCTGAAGACCTCCAGGATGTTGGCTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS TCA 72 bp | TTCAGTTCCCGGAATGAAGAATGGAGGCGGAGGCTGTaGATCTGGTTGCCAGATAGGTCTAAGCGAGCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: FSSRNEEWRRRL*IWLPDRSKRAN Trigger: ATTAGCTCGCTTAGACCTATCTGGCAACCAGATTCACAGCCTCCGCCTCCATTCTTCATTCCGGGAACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS GCA 72 bp | ACATCCTGGAGGTCTTCAGGCCACCTCAAGTACTGTTaGTTTTGCAGAAACCCTCTGATGGTCTCATGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TSWRSSGHLKYC*FCRNPLMVSCL Trigger: GAGACATGAGACCATCAGAGGGTTTCTGCAAAAGCAACAGTACTTGAGGTGGCCTGAAGACCTCCAGGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 72 bp | CTGGCAAATGTGCTCTGGTCAGGATCTCTGATGTTCTaGAAGCCAAAGCCAGGACCCATGATGTGGTGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: LANVLWSGSLMF*KPKPGPMMWCL Trigger: TAAACACCACATCATGGGTCCTGGCTTTGGCTTCCAGAACATCAGAGATCCTGACCAGAGCACATTTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 72 bp | TCTAGGAAGTTGGCAGTAAAGTGGATGTGTGGCAAATaGACCAGCTTATTGCCTCCCAGGAGGACCATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SRKLAVKWMCGK*TSLLPPRRTIC Trigger: ACAGATGGTCCTCCTGGGAGGCAATAAGCTGGTCCATTTGCCACACATCCACTTTACTGCCAACTTCCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 72 bp | CATCCGGAGAGTTTATCGAGAAACCAGCCAACATCCTaGAGGTCTTCAGGCCACCTCAAGTACTGTTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: HPESLSRNQPTS*RSSGHLKYCCF Trigger: AAAGCAACAGTACTTGAGGTGGCCTGAAGACCTCCAGGATGTTGGCTGGTTTCTCGATAAACTCTCCGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 72 bp | GGAAAACAGCCGAAGTTCCAAGAGATGGGGCAGACCTaGAAAGGCATCTCGATTCAAGACTTCGATCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GKQPKFQEMGQT*KGISIQDFDLA Trigger: AGCCAGATCGAAGTCTTGAATCGAGATGCCTTTCAAGGTCTGCCCCATCTCTTGGAACTTCGGCTGTTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 72 bp | CTGGAGGTCTTCAGGCCACCTCAAGTACTGTTGCTTTaGCAGAAACCCTCTGATGGTCTCATGTCTCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: LEVFRPPQVLLL*QKPSDGLMSHQ Trigger: CTGATGAGACATGAGACCATCAGAGGGTTTCTGCAAAAGCAACAGTACTTGAGGTGGCCTGAAGACCTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 90 bp | TTCAAGACTTCGATCTGGCTTTGGCCCAAGTCCAAGATCCTAAGATaGGGCAGGTTTCTGAAAGCCCCTGGACCAATGGTCAAGTTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FKTSIWLWPKSKILR*GRFLKAPGPMVKLA Trigger: TGCTAACTTGACCATTGGTCCAGGGGCTTTCAGAAACCTGCCCAATCTTAGGATCTTGGACTTGGGCCAAAGCCAGATCGAAGTCTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS TCA 72 bp | GCCTGTTTCGGGAACTGTAGTGAGCATCCAGGTGTTTaGGCAAAGCATTCTGTGCCCATTCAAAGTCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ACFGNCSEHPGV*AKHSVPIQSLC Trigger: GCAAAGACTTTGAATGGGCACAGAATGCTTTGCTCAAACACCTGGATGCTCACTACAGTTCCCGAAACAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS TCA 72 bp | GCCACCTCAAGTACTGTTGCTTTTGCAGAAACCCTCTaGTGGTCTCATGTCTCATCAGCTGATACTGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: ATSSTVAFAETL*WSHVSSADTGT Trigger: TGTCCCAGTATCAGCTGATGAGACATGAGACCATCAGAGGGTTTCTGCAAAAGCAACAGTACTTGAGGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 72 bp | AGAATCAAAGAGGAAATCTGGCTTCCCTGGATGATGTaGCTGAAGTTCCTTGTGATGTCCACCGTCCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RIKEEIWLPWMM*LKFLVMSTVQP Trigger: TGGCTGGACGGTGGACATCACAAGGAACTTCAGCAACATCATCCAGGGAAGCCAGATTTCCTCTTTGATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 72 bp | GCAGTAAAGTGGATGTGTGGCAAATGGACCAGCTTATaGCCTCCCAGGAGGACCATCTGTATGCTTGGAATA | + |
|
Preference number: 6 (lower is better) Translates to: AVKWMCGKWTSL*PPRRTICMLGI Trigger: TATTCCAAGCATACAGATGGTCCTCCTGGGAGGCAATAAGCTGGTCCATTTGCCACACATCCACTTTACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 90 bp | ATCTCTAAATTAGCAGGTAAACTGCCCGGAGAGAGCACGGTCAGCTaGTTAGCACTAAGACTAAGCATCCGTAATGCAACCAGGTCGTTA | + |
|
Preference number: 6 (lower is better) Translates to: ISKLAGKLPGESTVS*LALRLSIRNATRSL Trigger: TAACGACCTGGTTGCATTACGGATGCTTAGTCTTAGTGCTAACAAGCTGACCGTGCTCTCTCCGGGCAGTTTACCTGCTAATTTAGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS TCA 72 bp | TATATGCACCAGGTTCCAAACTCCAGACCTTGTCCTTaGACACCAGCTTCTGGATGGTCTTATAGCACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: YMHQVPNSRPCP*TPASGWSYSTG Trigger: TCCTGTGCTATAAGACCATCCAGAAGCTGGTGTTCAAGGACAAGGTCTGGAGTTTGGAACCTGGTGCATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 72 bp | CTGATGTTCTGGAAGCCAAAGCCAGGACCCATGATGTaGTGTTTAAGAATCAAAGAGGAAATCTGGCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LMFWKPKPGPMM*CLRIKEEIWLP Trigger: GGGAAGCCAGATTTCCTCTTTGATTCTTAAACACCACATCATGGGTCCTGGCTTTGGCTTCCAGAACATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 72 bp | TTGAAAGGCATCTCGATTCAAGACTTCGATCTGGCTTaGGCCCAAGTCCAAGATCCTAAGATTGGGCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LKGISIQDFDLA*AQVQDPKIGQV Trigger: AACCTGCCCAATCTTAGGATCTTGGACTTGGGCCAAAGCCAGATCGAAGTCTTGAATCGAGATGCCTTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 90 bp | AGGTCGGACAGGTTTTCTAGCCTGTTTTCAGATAACTCTAGGAAGTaGGCAGTAAAGTGGATGTGTGGCAAATGGACCAGCTTATTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RSDRFSSLFSDNSRK*AVKWMCGKWTSLLP Trigger: AGGCAATAAGCTGGTCCATTTGCCACACATCCACTTTACTGCCAACTTCCTAGAGTTATCTGAAAACAGGCTAGAAAACCTGTCCGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 90 bp | TGGTGTTTAAGAATCAAAGAGGAAATCTGGCTTCCCTGGATGATGTaGCTGAAGTTCCTTGTGATGTCCACCGTCCAGCCATTTTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: WCLRIKEEIWLPWMM*LKFLVMSTVQPFSE Trigger: TTCTGAAAATGGCTGGACGGTGGACATCACAAGGAACTTCAGCAACATCATCCAGGGAAGCCAGATTTCCTCTTTGATTCTTAAACACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS TCA 72 bp | GCAAAGCATTCTGTGCCCATTCAAAGTCTTTGCTGCTaGAGCAGAAGTAGGCATCATATCTATATGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: AKHSVPIQSLCC*SRSRHHIYMHQ Trigger: CTGGTGCATATAGATATGATGCCTACTTCTGCTTCAGCAGCAAAGACTTTGAATGGGCACAGAATGCTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS GCA 72 bp | TTTGCTGCTGAAGCAGAAGTAGGCATCATATCTATATaGACCAGGTTCCAAACTCCAGACCTTGTCCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: FAAEAEVGIISI*TRFQTPDLVLE Trigger: TTCAAGGACAAGGTCTGGAGTTTGGAACCTGGTGCATATAGATATGATGCCTACTTCTGCTTCAGCAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CCA 72 bp | TGGTGTTTAAGAATCAAAGAGGAAATCTGGCTTCCCTaGATGATGTTGCTGAAGTTCCTTGTGATGTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: WCLRIKEEIWLP*MMLLKFLVMST Trigger: GGTGGACATCACAAGGAACTTCAGCAACATCATCCAGGGAAGCCAGATTTCCTCTTTGATTCTTAAACACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 72 bp | GAATGTTTGGTCTTGAATGATCCCAATGTGGTTCCTTaGAAGGTCAACGTAGGCTACTCTAGGAAGCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: ECLVLNDPNVVP*KVNVGYSRKPI Trigger: TATGGGCTTCCTAGAGTAGCCTACGTTGACCTTCAAAGGAACCACATTGGGATCATTCAAGACCAAACATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 72 bp | AGGTTTTCTAGCCTGTTTTCAGATAACTCTAGGAAGTaGGCAGTAAAGTGGATGTGTGGCAAATGGACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RFSSLFSDNSRK*AVKWMCGKWTS Trigger: GCTGGTCCATTTGCCACACATCCACTTTACTGCCAACTTCCTAGAGTTATCTGAAAACAGGCTAGAAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS TCA 72 bp | CAGATAGGTCTAAGCGAGCTAATGAATATAGATTTCTaGAGTAACCGTCACTTAACACAGCACTGGAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QIGLSELMNIDF*SNRHLTQHWRV Trigger: GACTCTCCAGTGCTGTGTTAAGTGACGGTTACTTCAGAAATCTATATTCATTAGCTCGCTTAGACCTATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS TCA 72 bp | AAAGTGCTAAGTTCACAGTTGCAGACGAACTCGTTATaGGTTATGTCCAAAACACGAAGCGAAGAAAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: KVLSSQLQTNSL*VMSKTRSEENK Trigger: TTTGTTTTCTTCGCTTCGTGTTTTGGACATAACTCATAACGAGTTCGTCTGCAACTGTGAACTTAGCACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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| CDS CAA 72 bp | TGTATGCTTGGAATAAAACCAATGGCCTTAAGAGCATaGTCACGGAGATCTAAGGTTTGTAACGTTTTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: CMLGIKPMALRA*SRRSKVCNVFN Trigger: ATTAAAAACGTTACAAACCTTAGATCTCCGTGACAATGCTCTTAAGGCCATTGGTTTTATTCCAAGCATACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000191820.3 ENSMUST00000193687.7 |
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