RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TLR2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027995

Ensembl transcript IDs: ENSMUST00000029623.11

Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CCTGTGGCCGTGCAGGCGAGGCGGAGAGTCACACAGGTAGCTGTCTaGCCAGTCAACCAGGATTTGAGCCAGAGCTGGCGTCTCCATAGT +
Preference number: 5 (lower is better)
Translates to: PVAVQARRRVTQVAV*PVNQDLSQSWRLHS
Trigger: ACTATGGAGACGCCAGCTCTGGCTCAAATCCTGGTTGACTGGCCAGACAGCTACCTGTGTGACTCTCCGCCTCGCCTGCACGGCCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS TCA 90 bp GAGCGGCCATCACACACCCCAGAAGCATCACATGACAGAGACTCCTaGGCAGAACAGCGTTTGCTGAAGAGGACTGTTATGGCCACCAAG +
Preference number: 5 (lower is better)
Translates to: ERPSHTPEASHDRDS*AEQRLLKRTVMATK
Trigger: CTTGGTGGCCATAACAGTCCTCTTCAGCAAACGCTGTTCTGCTCAGGAGTCTCTGTCATGTGATGCTTCTGGGGTGTGTGATGGCCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS TCA 90 bp GGTGAAAGACCTGGAGCGGCCATCACACACCCCAGAAGCATCACATaGCAGAGACTCCTGAGCAGAACAGCGTTTGCTGAAGAGGACTGT +
Preference number: 5 (lower is better)
Translates to: GERPGAAITHPRSIT*QRLLSRTAFAEEDC
Trigger: ACAGTCCTCTTCAGCAAACGCTGTTCTGCTCAGGAGTCTCTGTCATGTGATGCTTCTGGGGTGTGTGATGGCCGCTCCAGGTCTTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CCA 90 bp CACCCGGATCCCTGTACTGGACAAATTCAGGAAGCGCATCTTTTCTaGCCACTGACAGCTGTCGGGCATCGGATGAAAAGTGTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: HPDPCTGQIQEAHLF*PLTAVGHRMKSVPA
Trigger: AGCAGGAACACTTTTCATCCGATGCCCGACAGCTGTCAGTGGCCAGAAAAGATGCGCTTCCTGAATTTGTCCAGTACAGGGATCCGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CCA 90 bp CCAGCGTCTGAGGAATGCACGTTTTTACCACCCGGATCCCTGTACTaGACAAATTCAGGAAGCGCATCTTTTCTGGCCACTGACAGCTGT +
Preference number: 5 (lower is better)
Translates to: PASEECTFLPPGSLY*TNSGSASFLATDSC
Trigger: ACAGCTGTCAGTGGCCAGAAAAGATGCGCTTCCTGAATTTGTCCAGTACAGGGATCCGGGTGGTAAAAACGTGCATTCCTCAGACGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS GCA 90 bp AATGTAGGTGATCTTGTTGAAAGACAGGTCAAGGCTTTTCATGGCTaGTGTGAGTCCGGAGGGAATAGAGGTGAAAGACCTGGAGCGGCC +
Preference number: 5 (lower is better)
Translates to: NVGDLVERQVKAFHG*CESGGNRGERPGAA
Trigger: GGCCGCTCCAGGTCTTTCACCTCTATTCCCTCCGGACTCACAGCAGCCATGAAAAGCCTTGACCTGTCTTTCAACAAGATCACCTACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS TCA 90 bp GTTCAAGACTGCCCAGAGAATAAAAGGCGTCTCCCTCTATTGTATTaGTTCTGCTGGACTTCAACATCAGAACCTGGAGGTTCGCACACG +
Preference number: 5 (lower is better)
Translates to: VQDCPENKRRLPLLY*FCWTSTSEPGGSHT
Trigger: CGTGTGCGAACCTCCAGGTTCTGATGTTGAAGTCCAGCAGAATCAATACAATAGAGGGAGACGCCTTTTATTCTCTGGGCAGTCTTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS TCA 90 bp AATGAGTCAAGATTGTTGTTACTAACATCCAACACCTCCAGCGTCTaGGGAATGCACGTTTTTACCACCCGGATCCCTGTACTGGACAAA +
Preference number: 5 (lower is better)
Translates to: NESRLLLLTSNTSSV*GMHVFTTRIPVLDK
Trigger: TTTGTCCAGTACAGGGATCCGGGTGGTAAAAACGTGCATTCCTCAGACGCTGGAGGTGTTGGATGTTAGTAACAACAATCTTGACTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS GCA 90 bp ACCATCAGATTTTCGCTGAGGTCTAAGAATTCTAATGATTTTAAATaGTGGGAGAACGAGCAGGGAACCAGGAAGACCTTGCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: TIRFSLRSKNSNDFK*WENEQGTRKTLLFS
Trigger: AGAGAACAGCAAGGTCTTCCTGGTTCCCTGCTCGTTCTCCCAGCATTTAAAATCATTAGAATTCTTAGACCTCAGCGAAAATCTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CCA 90 bp TTCTTCATCGGTGAGCTGACTTCATCTACGGGCAGTGGTGAAAACTaGAACCTGGCCAAGTTAGTATCTCTTAGTTCTAAATATCTCACA +
Preference number: 5 (lower is better)
Translates to: FFIGELTSSTGSGEN*NLAKLVSLSSKYLT
Trigger: TGTGAGATATTTAGAACTAAGAGATACTAACTTGGCCAGGTTCCAGTTTTCACCACTGCCCGTAGATGAAGTCAGCTCACCGATGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CCA 90 bp ACACAGGGAACAACGAAGCATCTGGGAGTGTTTTCAGCTTATTTCTaGAAATATAGAGCTCTTGCAGCCGAGGCAAGAACAAAGAAAATG +
Preference number: 5 (lower is better)
Translates to: TQGTTKHLGVFSAYF*KYRALAAEARTKKM
Trigger: CATTTTCTTTGTTCTTGCCTCGGCTGCAAGAGCTCTATATTTCCAGAAATAAGCTGAAAACACTCCCAGATGCTTCGTTGTTCCCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CCA 90 bp ATCAGATTTTCGCTGAGGTCTAAGAATTCTAATGATTTTAAATGCTaGGAGAACGAGCAGGGAACCAGGAAGACCTTGCTGTTCTCTACT +
Preference number: 5 (lower is better)
Translates to: IRFSLRSKNSNDFKC*ENEQGTRKTLLFST
Trigger: AGTAGAGAACAGCAAGGTCTTCCTGGTTCCCTGCTCGTTCTCCCAGCATTTAAAATCATTAGAATTCTTAGACCTCAGCGAAAATCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CCA 90 bp TTGTCGCCTGCTTCCAGAGTCTCCAGTTTGGGAAAAGAACCAAGTTaGTCTTTAGAGAAAGTACTTACTGCATTCTCTCTGATTTTCATG +
Preference number: 5 (lower is better)
Translates to: LSPASRVSSLGKEPS*SLEKVLTAFSLIFM
Trigger: CATGAAAATCAGAGAGAATGCAGTAAGTACTTTCTCTAAAGACCAACTTGGTTCTTTTCCCAAACTGGAGACTCTGGAAGCAGGCGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS GCA 90 bp CAGTTTGGGAAAAGAACCAAGTTGGTCTTTAGAGAAAGTACTTACTaGATTCTCTCTGATTTTCATGACCAGCAACACAGGGAACAACGA +
Preference number: 5 (lower is better)
Translates to: QFGKRTKLVFRESTY*ILSDFHDQQHREQR
Trigger: TCGTTGTTCCCTGTGTTGCTGGTCATGAAAATCAGAGAGAATGCAGTAAGTACTTTCTCTAAAGACCAACTTGGTTCTTTTCCCAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CCA 72 bp GTGCAGGCGAGGCGGAGAGTCACACAGGTAGCTGTCTaGCCAGTCAACCAGGATTTGAGCCAGAGCTGGCGT +
Preference number: 6 (lower is better)
Translates to: VQARRRVTQVAV*PVNQDLSQSWR
Trigger: ACGCCAGCTCTGGCTCAAATCCTGGTTGACTGGCCAGACAGCTACCTGTGTGACTCTCCGCCTCGCCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS TCA 72 bp CCGAGCCTCGGAATGCCAGCTTCTTCATCGGTGAGCTaGCTTCATCTACGGGCAGTGGTGAAAACTGGAACC +
Preference number: 6 (lower is better)
Translates to: PSLGMPASSSVS*LHLRAVVKTGT
Trigger: GGTTCCAGTTTTCACCACTGCCCGTAGATGAAGTCAGCTCACCGATGAAGAAGCTGGCATTCCGAGGCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS TCA 72 bp GACTGTTTCTACTTTACCCAGCTCGCTCACTACGTCTaGCTCCGAGGGGTTGAAATCGCCGAGCCCATTGAG +
Preference number: 6 (lower is better)
Translates to: DCFYFTQLAHYV*LRGVEIAEPIE
Trigger: CTCAATGGGCTCGGCGATTTCAACCCCTCGGAGTCAGACGTAGTGAGCGAGCTGGGTAAAGTAGAAACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS GCA 72 bp CCAGGTAGGTCTTGGTGTTCATTATCTTGCGCAGTTTaGAGAAGCGCTGGGGAATGGCTTTCCTCTCAATGG +
Preference number: 6 (lower is better)
Translates to: PGRSWCSLSCAV*RSAGEWLSSQW
Trigger: CCATTGAGAGGAAAGCCATTCCCCAGCGCTTCTGCAAACTGCGCAAGATAATGAACACCAAGACCTACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CAA 72 bp AAATGCTGGGAGAACGAGCAGGGAACCAGGAAGACCTaGCTGTTCTCTACTGTGATTCGCTTCACCTTCTCC +
Preference number: 6 (lower is better)
Translates to: KCWENEQGTRKT*LFSTVIRFTFS
Trigger: GGAGAAGGTGAAGCGAATCACAGTAGAGAACAGCAAGGTCTTCCTGGTTCCCTGCTCGTTCTCCCAGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS TCA 72 bp GACAGCTGTCGGGCATCGGATGAAAAGTGTTCCTGCTaGTGTCAAGAGAGGTCAGGTTTTTCAGAGTCAGCA +
Preference number: 6 (lower is better)
Translates to: DSCRASDEKCSC*CQERSGFSESA
Trigger: TGCTGACTCTGAAAAACCTGACCTCTCTTGACATCAGCAGGAACACTTTTCATCCGATGCCCGACAGCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CCA 72 bp TTGGTGTTCATTATCTTGCGCAGTTTGCAGAAGCGCTaGGGAATGGCTTTCCTCTCAATGGGCTCCAGCAAA +
Preference number: 6 (lower is better)
Translates to: LVFIILRSLQKR*GMAFLSMGSSK
Trigger: TTTGCTGGAGCCCATTGAGAGGAAAGCCATTCCCCAGCGCTTCTGCAAACTGCGCAAGATAATGAACACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS GCA 72 bp GATCTTGTTGAAAGACAGGTCAAGGCTTTTCATGGCTaGTGTGAGTCCGGAGGGAATAGAGGTGAAAGACCT +
Preference number: 6 (lower is better)
Translates to: DLVERQVKAFHG*CESGGNRGERP
Trigger: AGGTCTTTCACCTCTATTCCCTCCGGACTCACAGCAGCCATGAAAAGCCTTGACCTGTCTTTCAACAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CCA 72 bp ATAGTAAAGGATAGGAGTTCGCAGGAGCAAACAAAGTaGTTGTCGCCTGCTTCCAGAGTCTCCAGTTTGGGA +
Preference number: 6 (lower is better)
Translates to: IVKDRSSQEQTK*LSPASRVSSLG
Trigger: TCCCAAACTGGAGACTCTGGAAGCAGGCGACAACCACTTTGTTTGCTCCTGCGAACTCCTATCCTTTACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CAA 72 bp GTAAAGGATAGGAGTTCGCAGGAGCAAACAAAGTGGTaGTCGCCTGCTTCCAGAGTCTCCAGTTTGGGAAAA +
Preference number: 6 (lower is better)
Translates to: VKDRSSQEQTKW*SPASRVSSLGK
Trigger: TTTTCCCAAACTGGAGACTCTGGAAGCAGGCGACAACCACTTTGTTTGCTCCTGCGAACTCCTATCCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CAA 90 bp AATGATTTTAAATGCTGGGAGAACGAGCAGGGAACCAGGAAGACCTaGCTGTTCTCTACTGTGATTCGCTTCACCTTCTCCAGGAGGGAA +
Preference number: 6 (lower is better)
Translates to: NDFKCWENEQGTRKT*LFSTVIRFTFSRRE
Trigger: TTCCCTCCTGGAGAAGGTGAAGCGAATCACAGTAGAGAACAGCAAGGTCTTCCTGGTTCCCTGCTCGTTCTCCCAGCATTTAAAATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS TCA 72 bp AGATTGTTGTTACTAACATCCAACACCTCCAGCGTCTaGGGAATGCACGTTTTTACCACCCGGATCCCTGTA +
Preference number: 6 (lower is better)
Translates to: RLLLLTSNTSSV*GMHVFTTRIPV
Trigger: TACAGGGATCCGGGTGGTAAAAACGTGCATTCCTCAGACGCTGGAGGTGTTGGATGTTAGTAACAACAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CAA 90 bp CAGGAGCAAACAAAGTGGTTGTCGCCTGCTTCCAGAGTCTCCAGTTaGGGAAAAGAACCAAGTTGGTCTTTAGAGAAAGTACTTACTGCA +
Preference number: 6 (lower is better)
Translates to: QEQTKWLSPASRVSS*GKEPSWSLEKVLTA
Trigger: TGCAGTAAGTACTTTCTCTAAAGACCAACTTGGTTCTTTTCCCAAACTGGAGACTCTGGAAGCAGGCGACAACCACTTTGTTTGCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS TCA 72 bp AGGGGCCCGAACCAGGAGGAAGATAAACTAGATAGGTaGTTATCAGACAAATCCAAATGTTCAAGACTGCCC +
Preference number: 6 (lower is better)
Translates to: RGPNQEEDKLDR*LSDKSKCSRLP
Trigger: GGGCAGTCTTGAACATTTGGATTTGTCTGATAATCACCTATCTAGTTTATCTTCCTCCTGGTTCGGGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CCA 72 bp GGTGAGCTGACTTCATCTACGGGCAGTGGTGAAAACTaGAACCTGGCCAAGTTAGTATCTCTTAGTTCTAAA +
Preference number: 6 (lower is better)
Translates to: GELTSSTGSGEN*NLAKLVSLSSK
Trigger: TTTAGAACTAAGAGATACTAACTTGGCCAGGTTCCAGTTTTCACCACTGCCCGTAGATGAAGTCAGCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CCA 72 bp ACAACGAAGCATCTGGGAGTGTTTTCAGCTTATTTCTaGAAATATAGAGCTCTTGCAGCCGAGGCAAGAACA +
Preference number: 6 (lower is better)
Translates to: TTKHLGVFSAYF*KYRALAAEART
Trigger: TGTTCTTGCCTCGGCTGCAAGAGCTCTATATTTCCAGAAATAAGCTGAAAACACTCCCAGATGCTTCGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CAA 90 bp GTTGTCGCCTGCTTCCAGAGTCTCCAGTTTGGGAAAAGAACCAAGTaGGTCTTTAGAGAAAGTACTTACTGCATTCTCTCTGATTTTCAT +
Preference number: 6 (lower is better)
Translates to: VVACFQSLQFGKRTK*VFRESTYCILSDFH
Trigger: ATGAAAATCAGAGAGAATGCAGTAAGTACTTTCTCTAAAGACCAACTTGGTTCTTTTCCCAAACTGGAGACTCTGGAAGCAGGCGACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS CAA 72 bp TGCTTCCAGAGTCTCCAGTTTGGGAAAAGAACCAAGTaGGTCTTTAGAGAAAGTACTTACTGCATTCTCTCT +
Preference number: 6 (lower is better)
Translates to: CFQSLQFGKRTK*VFRESTYCILS
Trigger: AGAGAGAATGCAGTAAGTACTTTCTCTAAAGACCAACTTGGTTCTTTTCCCAAACTGGAGACTCTGGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11
CDS GCA 72 bp ATAGGTGATTATCAGACAAATCCAAATGTTCAAGACTaGCCAGAGAATAAAAGGCGTCTCCCTCTATTGTAT +
Preference number: 6 (lower is better)
Translates to: IGDYQTNPNVQD*PENKRRLPLLY
Trigger: ATACAATAGAGGGAGACGCCTTTTATTCTCTGGGCAGTCTTGAACATTTGGATTTGTCTGATAATCACCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029623.11