Pregenerated sensors for TLR11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051969Ensembl transcript IDs: ENSMUST00000063570.7, ENSMUST00000185091.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CATACACAGGATTGCACAAACCACTTTGTATGCATGTCTTGTGTGGTGAGCAGTATTTTGCCCCCTTGGTaGGCCCATGCTTTAGTGATG | + |
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Preference number: 2 (lower is better) Translates to: HTQDCTNHFVCMSCVVSSILPPW*AHALVM Trigger: CATCACTAAAGCATGGGCTCACCAAGGGGGCAAAAT...ACTGCTCACCACACAAGACATGCATACAAAGTGGTTTGTGCAATCCTGTGTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGGAATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATCATTCCCTCTGCTGCTaGAAGGATCTTCTGCACAAC | + |
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Preference number: 2 (lower is better) Translates to: QWNLIYHFAPLVSPCFSDHSLCC*KDLLHN Trigger: GTTGTGCAGAAGATCCTTTCAGCAGCAGAGGGAATG...ATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATTCCACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| 3UTR-3UTR TCA 90 bp | AATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCCATTCCCTCTGCTGCTaGAAGGATCTTCTGCACAAC | + |
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Preference number: 2 (lower is better) Translates to: NLIYHFAPLVSPCFSDESHSLCC*KDLLHN Trigger: GTTGTGCAGAAGATCCTTTCAGCAGCAGAGGGAATG...GCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| 3UTR TCA 72 bp | CATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTaGAAGGATCTTCTGCACAACAGCATTCCTGCAGTC | + |
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Preference number: 3 (lower is better) Translates to: HALVMRAHSLCC*KDLLHNSIPAV Trigger: GACTGCAGGAATGCTGTTGTGCAGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| 3UTR GCA 72 bp | AATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATaGTTTAGTGATGAGAGCACATTCCCTCTGCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: NLIYHFAPLVSP*FSDESTFPLLL Trigger: CAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| 3UTR GCA 72 bp | GAAAAACATACACAGGATTGCACAAACCACTTTGTATaGATGTCTTGTGTGGTGAGCAGTATCTCGTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: EKHTQDCTNHFV*MSCVVSSISCW Trigger: CCAGCACGAGATACTGCTCACCACACAAGACATGCATACAAAGTGGTTTGTGCAATCCTGTGTATGTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
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| 3UTR GCA 72 bp | TTTGTATGCATGTCTTGTGTGGTGAGCAGTATCTCGTaGTGGAACACACTAACAGGTAACAGAATTGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: FVCMSCVVSSIS*WNTLTGNRIVF Trigger: GAAAACAATTCTGTTACCTGTTAGTGTGTTCCAGCACGAGATACTGCTCACCACACAAGACATGCATACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
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| CDS-3UTR TCA 90 bp | CTTTGTATGCATGTCTTGTGTGGTGAGCAGTATCTCGTGCTGGAACACACTAACCTAAGGCCTGTCCTGTaGGCACACAGAGGGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCMHVLCGEQYLVLEHTNLRPVL*AHRGWL Trigger: GAGCCACCCTCTGTGTGCTCACAGGACAGGCCTTAG...GTTAGTGTGTTCCAGCACGAGATACTGCTCACCACACAAGACATGCATACAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
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| CDS-3UTR CCA 90 bp | TATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATTCCCTGAGTGGTCCCAGGCCTaGCTACCAAGTGGTAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: YHFAPLVSPCFSDESTFPEWSQA*LPSGKW Trigger: CCACTTACCACTTGGTAGCCAGGCCTGGGACCACTC...AGGGAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR GCA 90 bp | TATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATTCCCTGGGTGGCTCTGCTTTTaGCCATGCTGGCAATCATGG | + |
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Preference number: 4 (lower is better) Translates to: YHFAPLVSPCFSDESTFPGWLCF*PCWQSW Trigger: CCATGATTGCCAGCATGGGCAAAAGCAGAGCCACCC...AGGGAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR GCA 90 bp | AGCCCATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTGAAAGGATCTTCTCACAGAGGGTGGCTCTaGTTTTGCCCATGCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPCFSDESTFPLLLKGSSHRGWL*FCPCWQ Trigger: TTGCCAGCATGGGCAAAAGCAGAGCCACCCTCTGTG...AGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR TCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACACTAAGGCCTGTCCTGTaGGCACACAGAGGGTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTLRPVL*AHRGWL Trigger: GAGCCACCCTCTGTGTGCTCACAGGACAGGCCTTAG...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CCA 90 bp | ATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATTCACAGCAGGAGATGAGTaGTCCCAGGCCTGGCTACCA | + |
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Preference number: 4 (lower is better) Translates to: IYHFAPLVSPCFSDESTFTAGDE*SQAWLP Trigger: TGGTAGCCAGGCCTGGGACCACTCATCTCCTGCTGT...GAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR TCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACAAACAACAGCAGGAGATaGGTGGTCCCAGGCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTNNSRR*VVPGLA Trigger: AGCCAGGCCTGGGACCACTCATCTCCTGCTGTTGTT...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR GCA 90 bp | TTTGTATGCATGTCTTGTGTGGTGAGCAGTATCTCGTGCTGGAACACACTAACATCTAGTGTCCTCAGCTaGCTCAGTCCCTGCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: FVCMSCVVSSISCWNTLTSSVLS*LSPCRL Trigger: AAGCCTGCAGGGACTGAGGCAGCTGAGGACACTAGA...TGTTAGTGTGTTCCAGCACGAGATACTGCTCACCACACAAGACATGCATACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
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| CDS-3UTR GCA 90 bp | ATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATTCGGGTGGCTCTGCTTTTaGCCATGCTGGCAATCATGG | + |
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Preference number: 4 (lower is better) Translates to: IYHFAPLVSPCFSDESTFGWLCF*PCWQSW Trigger: CCATGATTGCCAGCATGGGCAAAAGCAGAGCCACCC...GAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CCA 90 bp | CCATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTGAAAGGATCTTCTGCAACTCAGCAGAAGGTCTaGGAAGAGCCTTTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PCFSDESTFPLLLKGSSATQQKV*EEPLKV Trigger: GACCTTCAAAGGCTCTTCCCAGACCTTCTGCTGAGT...TGCAGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CCA 90 bp | CCATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTGAAAGGATCTTCTGCAGAGAGGAAATGCAAGTaGAGCAGTCCTGAGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PCFSDESTFPLLLKGSSAERKCK*SSPESV Trigger: CACAGACTCAGGACTGCTCCACTTGCATTTCCTCTC...TGCAGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACAACAGCAGGAGATGAGTaGTCCCAGGCCTGGCTACCA | + |
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Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTTAGDE*SQAWLP Trigger: TGGTAGCCAGGCCTGGGACCACTCATCTCCTGCTGT...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR TCA 90 bp | TATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATTCCCTAGAACAGAGCAGAACTaGTGTCTTTCCATCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: YHFAPLVSPCFSDESTFPRTEQN*CLSILG Trigger: GCCAAGGATGGAAAGACATCAGTTCTGCTCTGTTCT...AGGGAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR TCA 90 bp | AGCCCATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTGAAAGGATCTTCTGCAGTCCTGAGTCTGTaGGATCAAGTGCTTTTAGTG | + |
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Preference number: 4 (lower is better) Translates to: SPCFSDESTFPLLLKGSSAVLSL*DQVLLV Trigger: CACTAAAAGCACTTGATCTCACAGACTCAGGACTGC...AGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR TCA 90 bp | ATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATTCCAAGTGGAGCAGTCCTaGGTCTGTGAGATCAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: IYHFAPLVSPCFSDESTFQVEQS*VCEIKC Trigger: GCACTTGATCTCACAGACTCAGGACTGCTCCACTTG...GAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR TCA 90 bp | AGCCCATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTGAAAGGATCTTCTCGCAGGGAGGGAAAATaGATTGTGATGTTGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SPCFSDESTFPLLLKGSSRREGK*IVMLSG Trigger: ACCAGACAACATCACAATTCATTTTCCCTCCCTGCG...AGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR TCA 90 bp | CCATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTGAAAGGATCTTCTGCACTGAAGTTGACTGGTTaGGAAGATGAAGCTGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: PCFSDESTFPLLLKGSSALKLTG*EDEAVA Trigger: GGCTACAGCTTCATCTTCTCAACCAGTCAACTTCAG...TGCAGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR GCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACACAAGATGCCAAAAGGTaGAGTCCTGGGGCCGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTQDAKR*SPGAEV Trigger: TACCTCGGCCCCAGGACTGCACCTTTTGGCATCTTG...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR GCA 90 bp | TACACAGGATTGCACAAACCACTTTGTATGCATGTCTTGTGTGGTGAGCAGTATCAAGATGCCAAAAGGTaGAGTCCTGGGGCCGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: YTGLHKPLCMHVLCGEQYQDAKR*SPGAEV Trigger: TACCTCGGCCCCAGGACTGCACCTTTTGGCATCTTG...ATACTGCTCACCACACAAGACATGCATACAAAGTGGTTTGTGCAATCCTGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
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| CDS-3UTR GCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATCTAGTGTCCTCAGCTaGCTCAGTCCCTGCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTSSVLS*LSPCRL Trigger: AAGCCTGCAGGGACTGAGGCAGCTGAGGACACTAGA...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR GCA 90 bp | CCATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTGAAAGGATCTTCTGCAAGCAGTTTGAGGTCCTaGAAGCTCTTAAAGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: PCFSDESTFPLLLKGSSASSLRS*KLLKLD Trigger: GTCCAGCTTTAAGAGCTTGCAGGACCTCAAACTGCT...TGCAGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR GCA 90 bp | TATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATTCCCTAGCCGTCTCTTCAGTTaGTCACAGAAAGAGTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: YHFAPLVSPCFSDESTFPSRLFS*SQKEFH Trigger: GTGGAACTCTTTCTGTGAGCAACTGAAGAGACGGCT...AGGGAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CCA 90 bp | ATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATTCGTAGGAACCATGCCCTaGAGGCAGAGTACCTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: IYHFAPLVSPCFSDESTFVGTMP*RQSTSV Trigger: TACAGAGGTACTCTGCCTCCAGGGCATGGTTCCTAC...GAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CCA 90 bp | GATTGCACAAACCACTTTGTATGCATGTCTTGTGTGGTGAGCAGTATCTCGTGCACTCAGCAGAAGGTCTaGGAAGAGCCTTTGAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: DCTNHFVCMSCVVSSISCTQQKV*EEPLKV Trigger: GACCTTCAAAGGCTCTTCCCAGACCTTCTGCTGAGT...GCACGAGATACTGCTCACCACACAAGACATGCATACAAAGTGGTTTGTGCAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
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| CDS-3UTR CCA 90 bp | CTTTGTATGCATGTCTTGTGTGGTGAGCAGTATCTCGTGCTGGAACACACTAACGGCTTTCTCCAGAACTaGAACCAGTTCTTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LCMHVLCGEQYLVLEHTNGFLQN*NQFFQH Trigger: GTGCTGGAAGAACTGGTTCCAGTTCTGGAGAAAGCC...GTTAGTGTGTTCCAGCACGAGATACTGCTCACCACACAAGACATGCATACAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
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| CDS-3UTR TCA 90 bp | CACAAACCACTTTGTATGCATGTCTTGTGTGGTGAGCAGTATCTCGTGCTGGAAAGAACAGAGCAGAACTaGTGTCTTTCCATCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: HKPLCMHVLCGEQYLVLERTEQN*CLSILG Trigger: GCCAAGGATGGAAAGACATCAGTTCTGCTCTGTTCT...TTCCAGCACGAGATACTGCTCACCACACAAGACATGCATACAAAGTGGTTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
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| CDS-3UTR TCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACACAAGTGGAGCAGTCCTaGGTCTGTGAGATCAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTQVEQS*VCEIKC Trigger: GCACTTGATCTCACAGACTCAGGACTGCTCCACTTG...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR TCA 90 bp | GATTGCACAAACCACTTTGTATGCATGTCTTGTGTGGTGAGCAGTATCTCGTGCCTGAAGTTGACTGGTTaGGAAGATGAAGCTGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: DCTNHFVCMSCVVSSISCLKLTG*EDEAVA Trigger: GGCTACAGCTTCATCTTCTCAACCAGTCAACTTCAG...GCACGAGATACTGCTCACCACACAAGACATGCATACAAAGTGGTTTGTGCAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
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| CDS-3UTR GCA 90 bp | CCATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTGAAAGGATCTTCTGCAAACATTAGAGCAAGATaGCAAAAGGTGCAGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PCFSDESTFPLLLKGSSANIRAR*QKVQSW Trigger: CCAGGACTGCACCTTTTGGCATCTTGCTCTAATGTT...TGCAGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR GCA 90 bp | CCATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTGAAAGGATCTTCTGCACACCAGATAAAGAAGTaGTCCAGAAGAGGAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PCFSDESTFPLLLKGSSAHQIKK*SRRGSC Trigger: ACAGCTTCCTCTTCTGGAGCACTTCTTTATCTGGTG...TGCAGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR GCA 90 bp | AATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCCACAGAGGGTGGCTCTaGTTTTGCCCATGCTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: NLIYHFAPLVSPCFSDESHRGWL*FCPCWQ Trigger: TTGCCAGCATGGGCAAAAGCAGAGCCACCCTCTGTG...GCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACAGTAGGAACCATGCCCTaGAGGCAGAGTACCTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTVGTMP*RQSTSV Trigger: TACAGAGGTACTCTGCCTCCAGGGCATGGTTCCTAC...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CCA 90 bp | ATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATTCGAGAGGAAATGCAAGTaGAGCAGTCCTGAGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: IYHFAPLVSPCFSDESTFERKCK*SSPESV Trigger: CACAGACTCAGGACTGCTCCACTTGCATTTCCTCTC...GAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CCA 90 bp | CACAAACCACTTTGTATGCATGTCTTGTGTGGTGAGCAGTATCTCGTGCTGGAATGCTTTTGCCCATGCTaGCAATCATGGATTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: HKPLCMHVLCGEQYLVLECFCPC*QSWIPS Trigger: GGATGGAATCCATGATTGCCAGCATGGGCAAAAGCA...TTCCAGCACGAGATACTGCTCACCACACAAGACATGCATACAAAGTGGTTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
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| CDS-3UTR GCA 90 bp | CTTTGTATGCATGTCTTGTGTGGTGAGCAGTATCTCGTGCTGGAACACACTAACCACCAGATAAAGAAGTaGTCCAGAAGAGGAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LCMHVLCGEQYLVLEHTNHQIKK*SRRGSC Trigger: ACAGCTTCCTCTTCTGGAGCACTTCTTTATCTGGTG...GTTAGTGTGTTCCAGCACGAGATACTGCTCACCACACAAGACATGCATACAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
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| CDS-3UTR CCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACAGCTAAAGAGTCCTTCTaGAAGCTCCAAGATTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTAKESF*KLQDWA Trigger: GGCCCAATCTTGGAGCTTCCAGAAGGACTCTTTAGC...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CCA 90 bp | TCCCAGTGGAATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGCTAAAGAGTCCTTCTaGAAGCTCCAAGATTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SQWNLIYHFAPLVSPCFSAKESF*KLQDWA Trigger: GGCCCAATCTTGGAGCTTCCAGAAGGACTCTTTAGC...ACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATTCCACTGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| 3UTR CAA 72 bp | TACACAGGATTGCACAAACCACTTTGTATGCATGTCTaGTGTGGTGAGCAGTATCTCGTGCTGGAACACACT | + |
|
Preference number: 4 (lower is better) Translates to: YTGLHKPLCMHV*CGEQYLVLEHT Trigger: AGTGTGTTCCAGCACGAGATACTGCTCACCACACAAGACATGCATACAAAGTGGTTTGTGCAATCCTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
||
| CDS-3UTR TCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACAACAAACTGTCTGCTATaGTGCAATCAGGGATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTTNCLL*CNQGWS Trigger: GGACCATCCCTGATTGCATCATAGCAGACAGTTTGT...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR TCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACAAGCTGGTCCAGTCCTTaGAAAGTCCTAGATGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTSWSSP*KVLDVT Trigger: TGTCACATCTAGGACTTTTCAAGGACTGGACCAGCT...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR TCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACAGCAGTCCTGAGTCTGTaGGATCAAGTGCTTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTAVLSL*DQVLLV Trigger: CACTAAAAGCACTTGATCTCACAGACTCAGGACTGC...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR TCA 90 bp | TATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATTCCCTAGTTTTGGAGTAGTCTaGGGCATTAGCTATGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YHFAPLVSPCFSDESTFPSFGVV*GISYAN Trigger: ATTTGCATAGCTAATGCCTCAGACTACTCCAAAACT...AGGGAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR TCA 90 bp | AGCCCATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTGAAAGGATCTTCTAGTTTTGGAGTAGTCTaGGGCATTAGCTATGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPCFSDESTFPLLLKGSSSFGVV*GISYAN Trigger: ATTTGCATAGCTAATGCCTCAGACTACTCCAAAACT...AGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR GCA 90 bp | AATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACAAGGGAGAGGAAATaGAAGTGGAGCAGTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLIYHFAPLVSPCFSDESTRERK*KWSSPE Trigger: CTCAGGACTGCTCCACTTGCATTTCCTCTCCCTTGT...GCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR GCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACAAGCAGTTTGAGGTCCTaGAAGCTCTTAAAGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTSSLRS*KLLKLD Trigger: GTCCAGCTTTAAGAGCTTGCAGGACCTCAAACTGCT...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR GCA 90 bp | TACACAGGATTGCACAAACCACTTTGTATGCATGTCTTGTGTGGTGAGCAGTATAGCCGTCTCTTCAGTTaGTCACAGAAAGAGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YTGLHKPLCMHVLCGEQYSRLFS*SQKEFH Trigger: GTGGAACTCTTTCTGTGAGCAACTGAAGAGACGGCT...ATACTGCTCACCACACAAGACATGCATACAAAGTGGTTTGTGCAATCCTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGGAATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGGCTTTCTCCAGAACTaGAACCAGTTCTTCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QWNLIYHFAPLVSPCFSDGFLQN*NQFFQH Trigger: GTGCTGGAAGAACTGGTTCCAGTTCTGGAGAAAGCC...ATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATTCCACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATGCTTTTGCCCATGCTaGCAATCATGGATTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTCFCPC*QSWIPS Trigger: GGATGGAATCCATGATTGCCAGCATGGGCAAAAGCA...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACTTTGGAAAAACATACACAGGATTGCACAAACCACTTTGTATGCATGTCGAGTGGTCCCAGGCCTaGCTACCAAGTGGTAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNFGKTYTGLHKPLCMHVEWSQA*LPSGKW Trigger: CCACTTACCACTTGGTAGCCAGGCCTGGGACCACTC...GACATGCATACAAAGTGGTTTGTGCAATCCTGTGTATGTTTTTCCAAAGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGGAATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATACAAACTGTCTGCTATaGTGCAATCAGGGATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QWNLIYHFAPLVSPCFSDTNCLL*CNQGWS Trigger: GGACCATCCCTGATTGCATCATAGCAGACAGTTTGT...ATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATTCCACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR TCA 90 bp | AATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCCGCAGGGAGGGAAAATaGATTGTGATGTTGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NLIYHFAPLVSPCFSDESRREGK*IVMLSG Trigger: ACCAGACAACATCACAATTCATTTTCCCTCCCTGCG...GCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR GCA 90 bp | TCCCAGTGGAATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTAACATTAGAGCAAGATaGCAAAAGGTGCAGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQWNLIYHFAPLVSPCFSNIRAR*QKVQSW Trigger: CCAGGACTGCACCTTTTGGCATCTTGCTCTAATGTT...ACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATTCCACTGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGGAATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATAATAAAGGCCTTAGCTaGCAGAGTAGGAACCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: QWNLIYHFAPLVSPCFSDNKGLS*QSRNHA Trigger: GGCATGGTTCCTACTCTGCCAGCTAAGGCCTTTATT...ATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATTCCACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR TCA 90 bp | TCCCAGTGGAATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGTCAGGCAATATCCTTaGAAGGAAAGACTACTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQWNLIYHFAPLVSPCFSVRQYP*KERLLR Trigger: CCTTAGTAGTCTTTCCTTTCAAGGATATTGCCTGAC...ACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATTCCACTGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR TCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACAGTCAGGCAATATCCTTaGAAGGAAAGACTACTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTVRQYP*KERLLR Trigger: CCTTAGTAGTCTTTCCTTTCAAGGATATTGCCTGAC...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTGGAATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTATGCCTAAGACTAGTTaGCAAGTAGATGCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQWNLIYHFAPLVSPCFSMPKTS*QVDALA Trigger: AGCCAAAGCATCTACTTGCCAACTAGTCTTAGGCAT...ACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATTCCACTGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CCA 90 bp | TACACAGGATTGCACAAACCACTTTGTATGCATGTCTTGTGTGGTGAGCAGTATATGCCTAAGACTAGTTaGCAAGTAGATGCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YTGLHKPLCMHVLCGEQYMPKTS*QVDALA Trigger: AGCCAAAGCATCTACTTGCCAACTAGTCTTAGGCAT...ATACTGCTCACCACACAAGACATGCATACAAAGTGGTTTGTGCAATCCTGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTGGAATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTTCCAATATTAGGGAATaGAGTGTGAGGCCATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQWNLIYHFAPLVSPCFSSNIRE*SVRPYK Trigger: CTTGTATGGCCTCACACTCCATTCCCTAATATTGGA...ACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATTCCACTGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CCA 90 bp | TATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATTCCCTAAGATGTTTTGGATTTaGTTTTTCCCAAGGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YHFAPLVSPCFSDESTFPKMFWI*FFPRSS Trigger: ACTTGACCTTGGGAAAAACCAAATCCAAAACATCTT...AGGGAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTGGAATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTAAGAGGAAGCTGTTGTaGGAAGAATCTCTGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQWNLIYHFAPLVSPCFSKRKLL*EESLKL Trigger: CAACTTCAGAGATTCTTCCCACAACAGCTTCCTCTT...ACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATTCCACTGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CCA 90 bp | AATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCTCCAATATTAGGGAATaGAGTGTGAGGCCATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLIYHFAPLVSPCFSDESSNIRE*SVRPYK Trigger: CTTGTATGGCCTCACACTCCATTCCCTAATATTGGA...GCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACACAGGGCTTTATAACCTaGGATTTCTCCATTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTQGFIT*DFSIFQ Trigger: TTGGAAAATGGAGAAATCCCAGGTTATAAAGCCCTG...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CCA 90 bp | AAACATACACAGGATTGCACAAACCACTTTGTATGCATGTCTTGTGTGGTGAGCCAGGGCTTTATAACCTaGGATTTCTCCATTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KHTQDCTNHFVCMSCVVSQGFIT*DFSIFQ Trigger: TTGGAAAATGGAGAAATCCCAGGTTATAAAGCCCTG...GCTCACCACACAAGACATGCATACAAAGTGGTTTGTGCAATCCTGTGTATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
||
| CDS-3UTR CCA 90 bp | AATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCAAGAGGAAGCTGTTGTaGGAAGAATCTCTGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLIYHFAPLVSPCFSDESKRKLL*EESLKL Trigger: CAACTTCAGAGATTCTTCCCACAACAGCTTCCTCTT...GCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR GCA 90 bp | TACACAGGATTGCACAAACCACTTTGTATGCATGTCTTGTGTGGTGAGCAGTATGACCCTGAAGTTGTATaGCTAAGATATATTCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YTGLHKPLCMHVLCGEQYDPEVV*LRYILS Trigger: ACTTAGAATATATCTTAGGCATACAACTTCAGGGTC...ATACTGCTCACCACACAAGACATGCATACAAAGTGGTTTGTGCAATCCTGTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
||
| CDS-3UTR CCA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACAAAGATGTTTTGGATTTaGTTTTTCCCAAGGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LIYHFAPLVSPCFSDESTKMFWI*FFPRSS Trigger: ACTTGACCTTGGGAAAAACCAAATCCAAAACATCTT...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR GCA 90 bp | AATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCGACCCTGAAGTTGTATaGCTAAGATATATTCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLIYHFAPLVSPCFSDESDPEVV*LRYILS Trigger: ACTTAGAATATATCTTAGGCATACAACTTCAGGGTC...GCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS TCA 90 bp | GTCGTAACTCTAGATTGCACCAGGGACTTGCTAAGGCCTGTCCTGTaGGCACACAGAGGGTGGCTCTGCTTTTGCCCATGCTGGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: VVTLDCTRDLLRPVL*AHRGWLCFCPCWQS Trigger: TGATTGCCAGCATGGGCAAAAGCAGAGCCACCCTCTGTGTGCTCACAGGACAGGCCTTAGCAAGTCCCTGGTGCAATCTAGAGTTACGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS TCA 90 bp | CAGAAGAGGAAGCTGTTGTGGGAAGAATCTCTGAAGTTGACTGGTTaGGAAGATGAAGCTGTAGCCACGCAAGGTGAGGCGACGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QKRKLLWEESLKLTG*EDEAVATQGEATQG Trigger: TCCCTGCGTCGCCTCACCTTGCGTGGCTACAGCTTCATCTTCTCAACCAGTCAACTTCAGAGATTCTTCCCACAACAGCTTCCTCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CAA 90 bp | CCATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTGAAAGGATCTTCTGCATTCCAGCACCCAAGCTaGATCCTCCTCACAATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PCFSDESTFPLLLKGSSAFQHPS*ILLTIG Trigger: TCCTATTGTGAGGAGGATCAAGCTTGGGTGCTGGAA...TGCAGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS GCA 90 bp | TTTCCCAAGGTCAAGTGCACGAAGCTCAGAGTAGCCAGTCAAACTTaGAGGCACTTTTTCTATTCCTGTTCCCACAAGGGAGAGGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: FPKVKCTKLRVASQT*RHFFYSCSHKGEEM Trigger: CATTTCCTCTCCCTTGTGGGAACAGGAATAGAAAAAGTGCCTGCAAGTTTGACTGGCTACTCTGAGCTTCGTGCACTTGACCTTGGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CAA 90 bp | ATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATTCAGCGCCCTTTCAGAGTaGAAGAGCAGCAGTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IYHFAPLVSPCFSDESTFSALSE*KSSSLR Trigger: CCTCAAACTGCTGCTCTTCAACTCTGAAAGGGCGCT...GAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS TCA 90 bp | TTCCCACAAGGGAGAGGAAATGCAAGTGGAGCAGTCCTGAGTCTGTaGGATCAAGTGCTTTTAGTGGGGTACCATCCAATATTAGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FPQGRGNASGAVLSL*DQVLLVGYHPILGN Trigger: ATTCCCTAATATTGGATGGTACCCCACTAAAAGCACTTGATCTCACAGACTCAGGACTGCTCCACTTGCATTTCCTCTCCCTTGTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTGAAAGGATCTTCTCCACTCCACTTTCCCTaGGGACAAATCAAAATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPCFSDESTFPLLLKGSSPLHFP*GQIKIV Trigger: GACTATTTTGATTTGTCCCAAGGGAAAGTGGAGTGG...AGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CAA 90 bp | CCATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTGAAAGGATCTTCTGCACCCTGCAGGCTTTCATaGGATAAACTAGAGATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: PCFSDESTFPLLLKGSSAPCRLS*DKLEML Trigger: TAACATCTCTAGTTTATCCAATGAAAGCCTGCAGGG...TGCAGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTGAAAGGATCTTCTCCCTGCAGGCTTTCATaGGATAAACTAGAGATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SPCFSDESTFPLLLKGSSPCRLS*DKLEML Trigger: TAACATCTCTAGTTTATCCAATGAAAGCCTGCAGGG...AGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CAA 90 bp | CATACACAGGATTGCACAAACCACTTTGTATGCATGTCTTGTGTGGTGAGCAGTTTGAAGAGCAGCAGTTaGAGGTCCTGCAAGCTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: HTQDCTNHFVCMSCVVSSLKSSS*RSCKLL Trigger: TAAGAGCTTGCAGGACCTCAAACTGCTGCTCTTCAA...ACTGCTCACCACACAAGACATGCATACAAAGTGGTTTGTGCAATCCTGTGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
||
| CDS-3UTR CAA 90 bp | AATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCAGCGCCCTTTCAGAGTaGAAGAGCAGCAGTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NLIYHFAPLVSPCFSDESSALSE*KSSSLR Trigger: CCTCAAACTGCTGCTCTTCAACTCTGAAAGGGCGCT...GCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CAA 90 bp | CTTTGTATGCATGTCTTGTGTGGTGAGCAGTATCTCGTGCTGGAACACACTAACGACATCATAGTTGAATaGGCCTCTGAGTCTATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LCMHVLCGEQYLVLEHTNDIIVE*ASESMS Trigger: GGACATAGACTCAGAGGCCAATTCAACTATGATGTC...GTTAGTGTGTTCCAGCACGAGATACTGCTCACCACACAAGACATGCATACAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
||
| CDS-3UTR CAA 90 bp | ATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATTCAGTCGTAACTCTAGATaGCACCAGGGACTTGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: IYHFAPLVSPCFSDESTFSRNSR*HQGLAK Trigger: CTTAGCAAGTCCCTGGTGCAATCTAGAGTTACGACT...GAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
||
| CDS-3UTR CAA 90 bp | TTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACAGTCTGGGAAGAGCCTTaGAAGGTCCTGAAACTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LIYHFAPLVSPCFSDESTVWEEP*KVLKLC Trigger: ACAAAGTTTCAGGACCTTCAAAGGCTCTTCCCAGAC...TGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CAA 90 bp | AAACATACACAGGATTGCACAAACCACTTTGTATGCATGTCTTGTGTGGTGAGCGTCTGGGAAGAGCCTTaGAAGGTCCTGAAACTTTGT | + |
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Preference number: 5 (lower is better) Translates to: KHTQDCTNHFVCMSCVVSVWEEP*KVLKLC Trigger: ACAAAGTTTCAGGACCTTCAAAGGCTCTTCCCAGAC...GCTCACCACACAAGACATGCATACAAAGTGGTTTGTGCAATCCTGTGTATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
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| CDS-3UTR CAA 90 bp | TATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATTCCCTCAAGATGTTTTGGATTaGGTTTTTCCCAAGGTCAAG | + |
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Preference number: 5 (lower is better) Translates to: YHFAPLVSPCFSDESTFPQDVLD*VFPKVK Trigger: CTTGACCTTGGGAAAAACCAAATCCAAAACATCTTG...AGGGAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CAA 90 bp | ATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGAGAGCACATTCCCTGGTAGGAAGTGTTaGCAGATGGTTATCATGAAG | + |
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Preference number: 5 (lower is better) Translates to: IYHFAPLVSPCFSDESTFPGRKC*QMVIMK Trigger: CTTCATGATAACCATCTGCAAACACTTCCTACCAGG...GAATGTGCTCTCATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CAA 90 bp | TTTGTATGCATGTCTTGTGTGGTGAGCAGTATCTCGTGCTGGAACACACTAACACCTGGTAGGAAGTGTTaGCAGATGGTTATCATGAAG | + |
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Preference number: 5 (lower is better) Translates to: FVCMSCVVSSISCWNTLTPGRKC*QMVIMK Trigger: CTTCATGATAACCATCTGCAAACACTTCCTACCAGG...TGTTAGTGTGTTCCAGCACGAGATACTGCTCACCACACAAGACATGCATACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
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| CDS-3UTR CAA 90 bp | CAGTGGAATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATTTCCAGCACCCAAGCTaGATCCTCCTCACAATAGGA | + |
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Preference number: 5 (lower is better) Translates to: QWNLIYHFAPLVSPCFSDFQHPS*ILLTIG Trigger: TCCTATTGTGAGGAGGATCAAGCTTGGGTGCTGGAA...ATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATTCCACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CAA 90 bp | CCATGCTTTAGTGATGAGAGCACATTCCCTCTGCTGCTGAAAGGATCTTCTGCAGAGACTCAAAACAATTaGGAGAGAGGAACAAACTTA | + |
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Preference number: 5 (lower is better) Translates to: PCFSDESTFPLLLKGSSAETQNN*ERGTNL Trigger: TAAGTTTGTTCCTCTCTCCAAATTGTTTTGAGTCTC...TGCAGAAGATCCTTTCAGCAGCAGAGGGAATGTGCTCTCATCACTAAAGCATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CAA 90 bp | CAGTGGAATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATTTGAAGAGCAGCAGTTaGAGGTCCTGCAAGCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: QWNLIYHFAPLVSPCFSDLKSSS*RSCKLL Trigger: TAAGAGCTTGCAGGACCTCAAACTGCTGCTCTTCAA...ATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATTCCACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CAA 90 bp | TACACAGGATTGCACAAACCACTTTGTATGCATGTCTTGTGTGGTGAGCAGTATCCACTCCACTTTCCCTaGGGACAAATCAAAATAGTC | + |
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Preference number: 5 (lower is better) Translates to: YTGLHKPLCMHVLCGEQYPLHFP*GQIKIV Trigger: GACTATTTTGATTTGTCCCAAGGGAAAGTGGAGTGG...ATACTGCTCACCACACAAGACATGCATACAAAGTGGTTTGTGCAATCCTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185091.2 |
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| CDS-3UTR CAA 90 bp | CAGTGGAATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGATGACATCATAGTTGAATaGGCCTCTGAGTCTATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QWNLIYHFAPLVSPCFSDDIIVE*ASESMS Trigger: GGACATAGACTCAGAGGCCAATTCAACTATGATGTC...ATCACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATTCCACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGTGGAATTTAATATATCATTTTGCCCCCTTGGTGAGCCCATGCTTTAGTGAGACTCAAAACAATTaGGAGAGAGGAACAAACTTA | + |
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Preference number: 5 (lower is better) Translates to: SQWNLIYHFAPLVSPCFSETQNN*ERGTNL Trigger: TAAGTTTGTTCCTCTCTCCAAATTGTTTTGAGTCTC...ACTAAAGCATGGGCTCACCAAGGGGGCAAAATGATATATTAAATTCCACTGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS TCA 72 bp | CTAGATTGCACCAGGGACTTGCTAAGGCCTGTCCTGTaGGCACACAGAGGGTGGCTCTGCTTTTGCCCATGC | + |
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Preference number: 6 (lower is better) Translates to: LDCTRDLLRPVL*AHRGWLCFCPC Trigger: GCATGGGCAAAAGCAGAGCCACCCTCTGTGTGCTCACAGGACAGGCCTTAGCAAGTCCCTGGTGCAATCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CAA 72 bp | GCCTGTCCTGTGAGCACACAGAGGGTGGCTCTGCTTTaGCCCATGCTGGCAATCATGGATTCCATCCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ACPVSTQRVALL*PMLAIMDSILS Trigger: TGACAGGATGGAATCCATGATTGCCAGCATGGGCAAAAGCAGAGCCACCCTCTGTGTGCTCACAGGACAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CCA 72 bp | CAAGCCTTCACCTTCAGGAGGGGCTTTCTCCAGAACTaGAACCAGTTCTTCCAGCACCCAAGCTTGATCCTC | + |
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Preference number: 6 (lower is better) Translates to: QAFTFRRGFLQN*NQFFQHPSLIL Trigger: GAGGATCAAGCTTGGGTGCTGGAAGAACTGGTTCCAGTTCTGGAGAAAGCCCCTCCTGAAGGTGAAGGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CCA 72 bp | TGGATTCCATCCTGTCATTTCCAATCCCAAAGTCCCTaGCAGGCAGGCACAACCTCAAGCCTTCACCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: WIPSCHFQSQSP*QAGTTSSLHLQ Trigger: CTGAAGGTGAAGGCTTGAGGTTGTGCCTGCCTGCCAGGGACTTTGGGATTGGAAATGACAGGATGGAATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CAA 90 bp | TTGCTGTTCATCTCCAGCGCCCTTTCAGAGTTGAAGAGCAGCAGTTaGAGGTCCTGCAAGCTCTTAAAGCTGGACACAGAGAGGTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLFISSALSELKSSS*RSCKLLKLDTERFL Trigger: CAGGAACCTCTCTGTGTCCAGCTTTAAGAGCTTGCAGGACCTCAAACTGCTGCTCTTCAACTCTGAAAGGGCGCTGGAGATGAACAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CCA 72 bp | AGAGGGTGGCTCTGCTTTTGCCCATGCTGGCAATCATaGATTCCATCCTGTCATTTCCAATCCCAAAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: RGWLCFCPCWQS*IPSCHFQSQSP Trigger: GGGACTTTGGGATTGGAAATGACAGGATGGAATCCATGATTGCCAGCATGGGCAAAAGCAGAGCCACCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CAA 72 bp | ATCTCCAGCGCCCTTTCAGAGTTGAAGAGCAGCAGTTaGAGGTCCTGCAAGCTCTTAAAGCTGGACACAGAG | + |
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Preference number: 6 (lower is better) Translates to: ISSALSELKSSS*RSCKLLKLDTE Trigger: CTCTGTGTCCAGCTTTAAGAGCTTGCAGGACCTCAAACTGCTGCTCTTCAACTCTGAAAGGGCGCTGGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CAA 90 bp | ATAAACTCCTGGAGGTTGCTGTTCATCTCCAGCGCCCTTTCAGAGTaGAAGAGCAGCAGTTTGAGGTCCTGCAAGCTCTTAAAGCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: INSWRLLFISSALSE*KSSSLRSCKLLKLD Trigger: GTCCAGCTTTAAGAGCTTGCAGGACCTCAAACTGCTGCTCTTCAACTCTGAAAGGGCGCTGGAGATGAACAGCAACCTCCAGGAGTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS TCA 72 bp | AAGCTGTTGTGGGAAGAATCTCTGAAGTTGACTGGTTaGGAAGATGAAGCTGTAGCCACGCAAGGTGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: KLLWEESLKLTG*EDEAVATQGEA Trigger: CGCCTCACCTTGCGTGGCTACAGCTTCATCTTCTCAACCAGTCAACTTCAGAGATTCTTCCCACAACAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS GCA 72 bp | CTTTCTTGTCCAGCTTTGCTGAGCCGTCTCTTCAGTTaGTCACAGAAAGAGTTCCACTCCACTTTCCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSCPALLSRLFS*SQKEFHSTFPW Trigger: CCAAGGGAAAGTGGAGTGGAACTCTTTCTGTGAGCAACTGAAGAGACGGCTCAGCAAAGCTGGACAAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CAA 72 bp | GGTCAAGTGCACGAAGCTCAGAGTAGCCAGTCAAACTaGCAGGCACTTTTTCTATTCCTGTTCCCACAAGGG | + |
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Preference number: 6 (lower is better) Translates to: GQVHEAQSSQSN*QALFLFLFPQG Trigger: CCCTTGTGGGAACAGGAATAGAAAAAGTGCCTGCAAGTTTGACTGGCTACTCTGAGCTTCGTGCACTTGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CAA 90 bp | CTTAAGTCTAGTGTCCTCAGCTGCCTCAGTCCCTGCAGGCTTTCATaGGATAAACTAGAGATGTTATTGCCACTCAACCAGAGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LKSSVLSCLSPCRLS*DKLEMLLPLNQSSW Trigger: CCAGGAGCTCTGGTTGAGTGGCAATAACATCTCTAGTTTATCCAATGAAAGCCTGCAGGGACTGAGGCAGCTGAGGACACTAGACTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS TCA 72 bp | GGGAGAGGAAATGCAAGTGGAGCAGTCCTGAGTCTGTaGGATCAAGTGCTTTTAGTGGGGTACCATCCAATA | + |
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Preference number: 6 (lower is better) Translates to: GRGNASGAVLSL*DQVLLVGYHPI Trigger: TATTGGATGGTACCCCACTAAAAGCACTTGATCTCACAGACTCAGGACTGCTCCACTTGCATTTCCTCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS GCA 72 bp | GTCAAGTGCACGAAGCTCAGAGTAGCCAGTCAAACTTaGAGGCACTTTTTCTATTCCTGTTCCCACAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: VKCTKLRVASQT*RHFFYSCSHKG Trigger: TCCCTTGTGGGAACAGGAATAGAAAAAGTGCCTGCAAGTTTGACTGGCTACTCTGAGCTTCGTGCACTTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CAA 72 bp | AGTGTCCTCAGCTGCCTCAGTCCCTGCAGGCTTTCATaGGATAAACTAGAGATGTTATTGCCACTCAACCAG | + |
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Preference number: 6 (lower is better) Translates to: SVLSCLSPCRLS*DKLEMLLPLNQ Trigger: CTGGTTGAGTGGCAATAACATCTCTAGTTTATCCAATGAAAGCCTGCAGGGACTGAGGCAGCTGAGGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CAA 90 bp | TGCCTCAGTCCCTGCAGGCTTTCATTGGATAAACTAGAGATGTTATaGCCACTCAACCAGAGCTCCTGGAGCTGTGACAAAAGGGATAAA | + |
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Preference number: 6 (lower is better) Translates to: CLSPCRLSLDKLEML*PLNQSSWSCDKRDK Trigger: TTTATCCCTTTTGTCACAGCTCCAGGAGCTCTGGTTGAGTGGCAATAACATCTCTAGTTTATCCAATGAAAGCCTGCAGGGACTGAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CAA 72 bp | CCCTGCAGGCTTTCATTGGATAAACTAGAGATGTTATaGCCACTCAACCAGAGCTCCTGGAGCTGTGACAAA | + |
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Preference number: 6 (lower is better) Translates to: PCRLSLDKLEML*PLNQSSWSCDK Trigger: TTTGTCACAGCTCCAGGAGCTCTGGTTGAGTGGCAATAACATCTCTAGTTTATCCAATGAAAGCCTGCAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS TCA 72 bp | CTGAGATTCAGGTGGCTCAATGCCAGTACCTGTAACTaGGGTACCTCCTTCAATAGCATCTCTAGCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: LRFRWLNASTCN*GTSFNSISSFI Trigger: TATGAAGCTAGAGATGCTATTGAAGGAGGTACCTCAGTTACAGGTACTGGCATTGAGCCACCTGAATCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS GCA 72 bp | ACTTTTTCTATTCCTGTTCCCACAAGGGAGAGGAAATaGAAGTGGAGCAGTCCTGAGTCTGTGAGATCAAGT | + |
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Preference number: 6 (lower is better) Translates to: TFSIPVPTRERK*KWSSPESVRSS Trigger: ACTTGATCTCACAGACTCAGGACTGCTCCACTTGCATTTCCTCTCCCTTGTGGGAACAGGAATAGAAAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS GCA 72 bp | CAAGATGTTTTGGATTTGGTTTTTCCCAAGGTCAAGTaGACGAAGCTCAGAGTAGCCAGTCAAACTTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QDVLDLVFPKVK*TKLRVASQTCR Trigger: CCTGCAAGTTTGACTGGCTACTCTGAGCTTCGTGCACTTGACCTTGGGAAAAACCAAATCCAAAACATCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CAA 72 bp | CTCCAGAACTGGAACCAGTTCTTCCAGCACCCAAGCTaGATCCTCCTCACAATAGGATATAAAGACATCATA | + |
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Preference number: 6 (lower is better) Translates to: LQNWNQFFQHPS*ILLTIGYKDII Trigger: TATGATGTCTTTATATCCTATTGTGAGGAGGATCAAGCTTGGGTGCTGGAAGAACTGGTTCCAGTTCTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS GCA 72 bp | GTAAATGCCTTAGCATCTTGGGACCCTGAAGTTGTATaGCTAAGATATATTCTAAGTAGGTGCCCAGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VNALASWDPEVV*LRYILSRCPEG Trigger: ACCTTCTGGGCACCTACTTAGAATATATCTTAGGCATACAACTTCAGGGTCCCAAGATGCTAAGGCATTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CAA 72 bp | CAAGTAGATGCTTTGGCTATAAGTCAGGCAATATCCTaGAAAGGAAAGACTACTAAGGGATCTAAGAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: QVDALAISQAIS*KGKTTKGSKRL Trigger: GAGTCTCTTAGATCCCTTAGTAGTCTTTCCTTTCAAGGATATTGCCTGACTTATAGCCAAAGCATCTACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CCA 72 bp | ATCATGAAGGCTAAGGAATTCCAGGGCTTTATAACCTaGGATTTCTCCATTTTCCAAGATGTTTTGGATTTG | + |
|
Preference number: 6 (lower is better) Translates to: IMKAKEFQGFIT*DFSIFQDVLDL Trigger: CAAATCCAAAACATCTTGGAAAATGGAGAAATCCCAGGTTATAAAGCCCTGGAATTCCTTAGCCTTCATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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| CDS CCA 72 bp | TTGGATAAGAACCCAGTTGTAAATGCCTTAGCATCTTaGGACCCTGAAGTTGTATGCCTAAGATATATTCTA | + |
|
Preference number: 6 (lower is better) Translates to: LDKNPVVNALAS*DPEVVCLRYIL Trigger: TAGAATATATCTTAGGCATACAACTTCAGGGTCCCAAGATGCTAAGGCATTTACAACTGGGTTCTTATCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063570.7 ENSMUST00000185091.2 |
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