RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TLNRD1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070462

Ensembl transcript IDs: ENSMUST00000094216.5

Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGTGTCTGAGTCCCTATAGTGGGCTGGTGGACACCCAGGCCCTCTaGGTACTTGATGATTGCATGGCCCTGCCTTCTGGAAAATTCCTC +
Preference number: 1 (lower is better)
Translates to: LCLSPYSGLVDTQAL*VLDDCMALPSGKFL
Trigger: GAGGAATTTTCCAGAAGGCAGGGCCATGCAATCATCAAGTACTCAGAGGGCCTGGGTGTCCACCAGCCCACTATAGGGACTCAGACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR TCA 90 bp GAGTACTTGATGATTGCATGGCCCTGCCTTCTGGAAAATTCCTCTTaGGCATTTAACATGAGGGAGGGGATCACCTATGGATTCTTTGGT +
Preference number: 1 (lower is better)
Translates to: EYLMIAWPCLLENSS*AFNMREGITYGFFG
Trigger: ACCAAAGAATCCATAGGTGATCCCCTCCCTCATGTTAAATGCTCAAGAGGAATTTTCCAGAAGGCAGGGCCATGCAATCATCAAGTACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR GCA 90 bp TCGATTGCCTTTAAAAATAGATCACATACATTTGTCTTTCTAGGGTaGAAGGATGCTCAGAGGAATAATACCAGAGGGAAAATGGAATTT +
Preference number: 1 (lower is better)
Translates to: SIAFKNRSHTFVFLG*KDAQRNNTRGKMEF
Trigger: AAATTCCATTTTCCCTCTGGTATTATTCCTCTGAGCATCCTTGCACCCTAGAAAGACAAATGTATGTGATCTATTTTTAAAGGCAATCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR TCA 90 bp CAAGGATTAGTTCTTCTGGCTCTTAATTCCTTTCAGTTTACTCTGTaGTATCTGCAGACTAAAGGAACCATAGGAAATTTAGACTTTATC +
Preference number: 1 (lower is better)
Translates to: QGLVLLALNSFQFTL*YLQTKGTIGNLDFI
Trigger: GATAAAGTCTAAATTTCCTATGGTTCCTTTAGTCTGCAGATATCACAGAGTAAACTGAAAGGAATTAAGAGCCAGAAGAACTAATCCTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR CCA 90 bp TCAGTTGATACAGTGCTGTTAAGTCCCATGCAAAATTCTGTGAGCTGGCAAGGCAACAGGTATAGGGGCTaGGGTGGGGGTGGAGCGTGG +
Preference number: 2 (lower is better)
Translates to: SVDTVLLSPMQNSVSWQGNRYRG*GGGGAW
Trigger: CCACGCTCCACCCCCACCCCAGCCCCTATACCTGTT...GCCTTGCCAGCTCACAGAATTTTGCATGGGACTTAACAGCACTGTATCAACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR CCA 90 bp CCTATAGTGGGCTGGTGGACACCCAGGCCCTCTGAGTACTTGATGATTGCATGGCACCTATGGATTCTTTaGTATAAATGGAGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: PIVGWWTPRPSEYLMIAWHLWIL*YKWRGE
Trigger: CTCCCCTCTCCATTTATACCAAAGAATCCATAGGTG...CCATGCAATCATCAAGTACTCAGAGGGCCTGGGTGTCCACCAGCCCACTATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR CCA 90 bp CCTATAGTGGGCTGGTGGACACCCAGGCCCTCTGAGTACTTGATGATTGCATGGATTCTTTGGTATAAATaGAGAGGGGAGGGGTTAAGT +
Preference number: 2 (lower is better)
Translates to: PIVGWWTPRPSEYLMIAWILWYK*RGEGLS
Trigger: ACTTAACCCCTCCCCTCTCCATTTATACCAAAGAAT...CCATGCAATCATCAAGTACTCAGAGGGCCTGGGTGTCCACCAGCCCACTATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR CCA 90 bp ATTTCAATCAACAAAATACTCTTTCAATACCCAACCAGCCACTTGAATCAAGGTGTCCCTATAGTGGGCTaGTGGACACCCAGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: ISINKILFQYPTSHLNQGVPIVG*WTPRPS
Trigger: AGAGGGCCTGGGTGTCCACCAGCCCACTATAGGGAC...ACCTTGATTCAAGTGGCTGGTTGGGTATTGAAAGAGTATTTTGTTGATTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR GCA 90 bp TTTCCATGTGTACATAGGACTTCTTTTGGCAGCCCTCTTGCCAATCTACCTGCATTTGTCTTTCTAGGGTaGAAGGATGCTCAGAGGAAT +
Preference number: 2 (lower is better)
Translates to: FPCVHRTSFGSPLANLPAFVFLG*KDAQRN
Trigger: ATTCCTCTGAGCATCCTTGCACCCTAGAAAGACAAA...TGCAGGTAGATTGGCAAGAGGGCTGCCAAAAGAAGTCCTATGTACACATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR CCA 90 bp TCAGTTGATACAGTGCTGTTAAGTCCCATGCAAAATTCTGTGAGCTGGCAAGGCTACTTGATGATTGCATaGCCCTGCCTTCTGGAAAAT +
Preference number: 2 (lower is better)
Translates to: SVDTVLLSPMQNSVSWQGYLMIA*PCLLEN
Trigger: ATTTTCCAGAAGGCAGGGCCATGCAATCATCAAGTA...GCCTTGCCAGCTCACAGAATTTTGCATGGGACTTAACAGCACTGTATCAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR CCA 90 bp GTTAATGTCATGCAAGGAGATAGGGCAAGTCTTTTTGCCTTTTGGCTTGCAGTTCTGGCCTCAGACTTATaGCAAGACTTCGACTTCAGT +
Preference number: 2 (lower is better)
Translates to: VNVMQGDRASLFAFWLAVLASDL*QDFDFS
Trigger: ACTGAAGTCGAAGTCTTGCCATAAGTCTGAGGCCAG...AACTGCAAGCCAAAAGGCAAAAAGACTTGCCCTATCTCCTTGCATGACATTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR TCA 90 bp TCCTCCCCCACGCACTGCATAGTCCAATCACATTCGATTGCCTTTAAAAATAGACTGGAAAATTCCTCTTaGGCATTTAACATGAGGGAG +
Preference number: 2 (lower is better)
Translates to: SSPTHCIVQSHSIAFKNRLENSS*AFNMRE
Trigger: CTCCCTCATGTTAAATGCTCAAGAGGAATTTTCCAG...TCTATTTTTAAAGGCAATCGAATGTGATTGGACTATGCAGTGCGTGGGGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR TCA 90 bp GTTAATGTCATGCAAGGAGATAGGGCAAGTCTTTTTGCCTTTTGGCTTGCAGTTCAGTCTCTGAAGTGTTaGAATGAGAGGTGTGAGCAA +
Preference number: 2 (lower is better)
Translates to: VNVMQGDRASLFAFWLAVQSLKC*NERCEQ
Trigger: TTGCTCACACCTCTCATTTCAACACTTCAGAGACTG...AACTGCAAGCCAAAAGGCAAAAAGACTTGCCCTATCTCCTTGCATGACATTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR TCA 90 bp GTTAATGTCATGCAAGGAGATAGGGCAAGTCTTTTTGCCTTTTGGCTTGCAGTTAAAAGAAGGAAGAAATaGGCCCATGACCTCTTTCCT +
Preference number: 2 (lower is better)
Translates to: VNVMQGDRASLFAFWLAVKRRKK*AHDLFP
Trigger: AGGAAAGAGGTCATGGGCTCATTTCTTCCTTCTTTT...AACTGCAAGCCAAAAGGCAAAAAGACTTGCCCTATCTCCTTGCATGACATTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR TCA 90 bp GTTAATGTCATGCAAGGAGATAGGGCAAGTCTTTTTGCCTTTTGGCTTGCAGTTACCCAACCAGCCACTTaGATCAAGGTCATAAAAACA +
Preference number: 2 (lower is better)
Translates to: VNVMQGDRASLFAFWLAVTQPAT*IKVIKT
Trigger: TGTTTTTATGACCTTGATTCAAGTGGCTGGTTGGGT...AACTGCAAGCCAAAAGGCAAAAAGACTTGCCCTATCTCCTTGCATGACATTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR TCA 90 bp TTTCCATGTGTACATAGGACTTCTTTTGGCAGCCCTCTTGCCAATCTACCTGCAGCTAACATTTTATGGTaGCAACTTTTCAGATCTGTG +
Preference number: 2 (lower is better)
Translates to: FPCVHRTSFGSPLANLPAANILW*QLFRSV
Trigger: CACAGATCTGAAAAGTTGTCACCATAAAATGTTAGC...TGCAGGTAGATTGGCAAGAGGGCTGCCAAAAGAAGTCCTATGTACACATGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR GCA 90 bp GTTAATGTCATGCAAGGAGATAGGGCAAGTCTTTTTGCCTTTTGGCTTGCAGTTTTCCTAATGCATATTTaGTGTGCTGAGACACCAACT +
Preference number: 2 (lower is better)
Translates to: VNVMQGDRASLFAFWLAVFLMHI*CAETPT
Trigger: AGTTGGTGTCTCAGCACAGCAAATATGCATTAGGAA...AACTGCAAGCCAAAAGGCAAAAAGACTTGCCCTATCTCCTTGCATGACATTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR CCA 90 bp GTTAATGTCATGCAAGGAGATAGGGCAAGTCTTTTTGCCTTTTGGCTTGCAGTTAATGGAATTTTAGAGTaGAAATGGTTAGGCACTGGG +
Preference number: 2 (lower is better)
Translates to: VNVMQGDRASLFAFWLAVNGILE*KWLGTG
Trigger: CCCAGTGCCTAACCATTTCCACTCTAAAATTCCATT...AACTGCAAGCCAAAAGGCAAAAAGACTTGCCCTATCTCCTTGCATGACATTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR CCA 90 bp TCAGTTGATACAGTGCTGTTAAGTCCCATGCAAAATTCTGTGAGCTGGCAAGGCGTAAGCCTGAACCTATaGCTCATTATAATAGAGAAA +
Preference number: 2 (lower is better)
Translates to: SVDTVLLSPMQNSVSWQGVSLNL*LIIIEK
Trigger: TTTCTCTATTATAATGAGCCATAGGTTCAGGCTTAC...GCCTTGCCAGCTCACAGAATTTTGCATGGGACTTAACAGCACTGTATCAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR TCA 90 bp ATTGCCTTTAAAAATAGATCACATACATTTGTCTTTCTAGGGTGCAAGGATGCTGAAGAAATGAGCCCATaGCCTCTTTCCTGCCCAATT +
Preference number: 2 (lower is better)
Translates to: IAFKNRSHTFVFLGCKDAEEMSP*PLSCPI
Trigger: AATTGGGCAGGAAAGAGGTCATGGGCTCATTTCTTC...AGCATCCTTGCACCCTAGAAAGACAAATGTATGTGATCTATTTTTAAAGGCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR CCA 90 bp ATTTCAATCAACAAAATACTCTTTCAATACCCAACCAGCCACTTGAATCAAGGTGAAATGGTTAGGCACTaGGGATTCACTTGCCAATGG +
Preference number: 2 (lower is better)
Translates to: ISINKILFQYPTSHLNQGEMVRH*GFTCQW
Trigger: CCATTGGCAAGTGAATCCCCAGTGCCTAACCATTTC...ACCTTGATTCAAGTGGCTGGTTGGGTATTGAAAGAGTATTTTGTTGATTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR CAA 90 bp ATGATTTCAATCAACAAAATACTCTTTCAATACCCAACCAGCCACTaGAATCAAGGTCATAAAAACAAGCCCTCCACTGACAAGCATGCT +
Preference number: 2 (lower is better)
Translates to: MISINKILFQYPTSH*NQGHKNKPSTDKHA
Trigger: AGCATGCTTGTCAGTGGAGGGCTTGTTTTTATGACCTTGATTCAAGTGGCTGGTTGGGTATTGAAAGAGTATTTTGTTGATTGAAATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR CCA 90 bp ATTGCCTTTAAAAATAGATCACATACATTTGTCTTTCTAGGGTGCAAGGATGCTATACCAGAGGGAAAATaGAATTTTAGAGTGGAAATG +
Preference number: 2 (lower is better)
Translates to: IAFKNRSHTFVFLGCKDAIPEGK*NFRVEM
Trigger: CATTTCCACTCTAAAATTCCATTTTCCCTCTGGTAT...AGCATCCTTGCACCCTAGAAAGACAAATGTATGTGATCTATTTTTAAAGGCAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR TCA 72 bp AGTCCCTATAGTGGGCTGGTGGACACCCAGGCCCTCTaGGTACTTGATGATTGCATGGCCCTGCCTTCTGGA +
Preference number: 3 (lower is better)
Translates to: SPYSGLVDTQAL*VLDDCMALPSG
Trigger: TCCAGAAGGCAGGGCCATGCAATCATCAAGTACTCAGAGGGCCTGGGTGTCCACCAGCCCACTATAGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR CCA 72 bp ACAGTGCTGTTAAGTCCCATGCAAAATTCTGTGAGCTaGCAAGGCAGCACCCCACACAGTATTAGGAAGTAC +
Preference number: 3 (lower is better)
Translates to: TVLLSPMQNSVS*QGSTPHSIRKY
Trigger: GTACTTCCTAATACTGTGTGGGGTGCTGCCTTGCCAGCTCACAGAATTTTGCATGGGACTTAACAGCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR-3UTR CAA 90 bp TCAGTTGATACAGTGCTGTTAAGTCCCATGCAAAATTCTGTGAGCTGGCAAGGCCTCTTTCCTGCCCAATaGATAACTGAGTTGAGGGGC +
Preference number: 3 (lower is better)
Translates to: SVDTVLLSPMQNSVSWQGLFPAQ*ITELRG
Trigger: GCCCCTCAACTCAGTTATCAATTGGGCAGGAAAGAG...GCCTTGCCAGCTCACAGAATTTTGCATGGGACTTAACAGCACTGTATCAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR TCA 72 bp ATGATTGCATGGCCCTGCCTTCTGGAAAATTCCTCTTaGGCATTTAACATGAGGGAGGGGATCACCTATGGA +
Preference number: 3 (lower is better)
Translates to: MIAWPCLLENSS*AFNMREGITYG
Trigger: TCCATAGGTGATCCCCTCCCTCATGTTAAATGCTCAAGAGGAATTTTCCAGAAGGCAGGGCCATGCAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR TCA 72 bp CTTATGGCAAGACTTCGACTTCAGTCTCTGAAGTGTTaGAATGAGAGGTGTGAGCAACAGCCAGGTTTGCTC +
Preference number: 3 (lower is better)
Translates to: LMARLRLQSLKC*NERCEQQPGLL
Trigger: GAGCAAACCTGGCTGTTGCTCACACCTCTCATTTCAACACTTCAGAGACTGAAGTCGAAGTCTTGCCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR TCA 72 bp TCAACAAAATACTCTTTCAATACCCAACCAGCCACTTaGATCAAGGTCATAAAAACAAGCCCTCCACTGACA +
Preference number: 3 (lower is better)
Translates to: STKYSFNTQPAT*IKVIKTSPPLT
Trigger: TGTCAGTGGAGGGCTTGTTTTTATGACCTTGATTCAAGTGGCTGGTTGGGTATTGAAAGAGTATTTTGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR TCA 72 bp ATTTCTCACTTAATTCCTAATGCATATTTGCTGTGCTaGGACACCAACTGTCTATGCTGGCCTCAGACTTAT +
Preference number: 3 (lower is better)
Translates to: ISHLIPNAYLLC*DTNCLCWPQTY
Trigger: ATAAGTCTGAGGCCAGCATAGACAGTTGGTGTCTCAGCACAGCAAATATGCATTAGGAATTAAGTGAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR GCA 72 bp TTTAAAAATAGATCACATACATTTGTCTTTCTAGGGTaGAAGGATGCTCAGAGGAATAATACCAGAGGGAAA +
Preference number: 3 (lower is better)
Translates to: FKNRSHTFVFLG*KDAQRNNTRGK
Trigger: TTTCCCTCTGGTATTATTCCTCTGAGCATCCTTGCACCCTAGAAAGACAAATGTATGTGATCTATTTTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR GCA 90 bp CCTATAGTGGGCTGGTGGACACCCAGGCCCTCTGAGTACTTGATGATTGCATGGCGGTGTGGCCACGGCTaGCAGGTAGGCCGCATGTGC +
Preference number: 4 (lower is better)
Translates to: PIVGWWTPRPSEYLMIAWRCGHG*QVGRMC
Trigger: GCACATGCGGCCTACCTGGCAGCCGTGGCCACACCG...CCATGCAATCATCAAGTACTCAGAGGGCCTGGGTGTCCACCAGCCCACTATAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR GCA 90 bp CCTATAGTGGGCTGGTGGACACCCAGGCCCTCTGAGTACTTGATGATTGCATGGCCCAGGATGGCGGTCTaGACCGCCTTGCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PIVGWWTPRPSEYLMIAWPRMAV*TALPSV
Trigger: CACTGAGGGCAAGGCGGTGCAGACCGCCATCCTGGG...CCATGCAATCATCAAGTACTCAGAGGGCCTGGGTGTCCACCAGCCCACTATAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR GCA 90 bp CCTATAGTGGGCTGGTGGACACCCAGGCCCTCTGAGTACTTGATGATTGCATGGCTCCCATCTGGGTGCTaGGCCAGATCCCTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PIVGWWTPRPSEYLMIAWLPSGC*ARSLRH
Trigger: GTGCCTCAGGGATCTGGCGCAGCACCCAGATGGGAG...CCATGCAATCATCAAGTACTCAGAGGGCCTGGGTGTCCACCAGCCCACTATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CCA 90 bp CCTATAGTGGGCTGGTGGACACCCAGGCCCTCTGAGTACTTGATGATTGCATGGTGGCTCTGCACGTCGTaGGTGAGGATGGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: PIVGWWTPRPSEYLMIAWWLCTS*VRMDSP
Trigger: GGGGCTGTCCATCCTCACCCACGACGTGCAGAGCCA...CCATGCAATCATCAAGTACTCAGAGGGCCTGGGTGTCCACCAGCCCACTATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR GCA 90 bp TACCCAACCAGCCACTTGAATCAAGGTCATAAAAACAAGCCCTCCACTGACAAGAGCCTCTTCCGCGGCTaGGAGCTGGCCCCGCCGACG +
Preference number: 4 (lower is better)
Translates to: YPTSHLNQGHKNKPSTDKSLFRG*ELAPPT
Trigger: CGTCGGCGGGGCCAGCTCGCAGCCGCGGAAGAGGCT...CTTGTCAGTGGAGGGCTTGTTTTTATGACCTTGATTCAAGTGGCTGGTTGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR GCA 90 bp CCTATAGTGGGCTGGTGGACACCCAGGCCCTCTGAGTACTTGATGATTGCATGGATGGTGTCCCGGCACTaGTCGAAGGACTCCGCACCA +
Preference number: 4 (lower is better)
Translates to: PIVGWWTPRPSEYLMIAWMVSRH*SKDSAP
Trigger: TGGTGCGGAGTCCTTCGAGCAGTGCCGGGACACCAT...CCATGCAATCATCAAGTACTCAGAGGGCCTGGGTGTCCACCAGCCCACTATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR GCA 90 bp CCTATAGTGGGCTGGTGGACACCCAGGCCCTCTGAGTACTTGATGATTGCATGGCCTGAGATAGCAGGGTaGAGCCTTCAGACACGGCGC +
Preference number: 4 (lower is better)
Translates to: PIVGWWTPRPSEYLMIAWPEIAG*SLQTRR
Trigger: GCGCCGTGTCTGAAGGCTGCACCCTGCTATCTCAGG...CCATGCAATCATCAAGTACTCAGAGGGCCTGGGTGTCCACCAGCCCACTATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CCA 90 bp TCCTCCCCCACGCACTGCATAGTCCAATCACATTCGATTGCCTTTAAAAATAGAAAGCCGCCTCGCCAGTaGGCTTCCCGGCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SSPTHCIVQSHSIAFKNRKPPRQ*ASRRCR
Trigger: GCGGCAGCGCCGGGAAGCCCACTGGCGAGGCGGCTT...TCTATTTTTAAAGGCAATCGAATGTGATTGGACTATGCAGTGCGTGGGGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR TCA 90 bp TACCCAACCAGCCACTTGAATCAAGGTCATAAAAACAAGCCCTCCACTGACAAGGCACCAAGGGCCCACTaGAGAGCGCGCAACGACTGC +
Preference number: 4 (lower is better)
Translates to: YPTSHLNQGHKNKPSTDKAPRAH*RARNDC
Trigger: GCAGTCGTTGCGCGCTCTTCAGTGGGCCCTTGGTGC...CTTGTCAGTGGAGGGCTTGTTTTTATGACCTTGATTCAAGTGGCTGGTTGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR GCA 90 bp TCAGTTGATACAGTGCTGTTAAGTCCCATGCAAAATTCTGTGAGCTGGCAAGGCCGGTCTGCACCGCCTTaGCCTCAGTGCTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: SVDTVLLSPMQNSVSWQGRSAPP*PQCSRQ
Trigger: CTGCCGTGAGCACTGAGGGCAAGGCGGTGCAGACCG...GCCTTGCCAGCTCACAGAATTTTGCATGGGACTTAACAGCACTGTATCAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR GCA 90 bp TACCCAACCAGCCACTTGAATCAAGGTCATAAAAACAAGCCCTCCACTGACAAGGCGCTCCCATCTGGGTaGTGCGCCAGATCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: YPTSHLNQGHKNKPSTDKALPSG*CARSLR
Trigger: CCTCAGGGATCTGGCGCAGCACCCAGATGGGAGCGC...CTTGTCAGTGGAGGGCTTGTTTTTATGACCTTGATTCAAGTGGCTGGTTGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CCA 90 bp TCAGTTGATACAGTGCTGTTAAGTCCCATGCAAAATTCTGTGAGCTGGCAAGGCTGTCCGCCAGTGGGGTaGCTCGCAGCACAGCACAGC +
Preference number: 4 (lower is better)
Translates to: SVDTVLLSPMQNSVSWQGCPPVG*LAAQHS
Trigger: GCTGTGCTGTGCTGCGAGCCACCCCACTGGCGGACA...GCCTTGCCAGCTCACAGAATTTTGCATGGGACTTAACAGCACTGTATCAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CCA 90 bp TCAGTTGATACAGTGCTGTTAAGTCCCATGCAAAATTCTGTGAGCTGGCAAGGCCCCGTGACTTGTCACTaGCCAGGGCGCACGCATCCG +
Preference number: 4 (lower is better)
Translates to: SVDTVLLSPMQNSVSWQGPVTCH*PGRTHP
Trigger: CGGATGCGTGCGCCCTGGCCAGTGACAAGTCACGGG...GCCTTGCCAGCTCACAGAATTTTGCATGGGACTTAACAGCACTGTATCAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR CAA 72 bp ATAGTGGGCTGGTGGACACCCAGGCCCTCTGAGTACTaGATGATTGCATGGCCCTGCCTTCTGGAAAATTCC +
Preference number: 4 (lower is better)
Translates to: IVGWWTPRPSEY*MIAWPCLLENS
Trigger: GGAATTTTCCAGAAGGCAGGGCCATGCAATCATCAAGTACTCAGAGGGCCTGGGTGTCCACCAGCCCACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR TCA 90 bp TCCTCCCCCACGCACTGCATAGTCCAATCACATTCGATTGCCTTTAAAAATAGACGAAGCGGCCCATGTTaGGCTGGCTCTGCACGTCGT +
Preference number: 4 (lower is better)
Translates to: SSPTHCIVQSHSIAFKNRRSGPC*AGSARR
Trigger: ACGACGTGCAGAGCCAGCTCAACATGGGCCGCTTCG...TCTATTTTTAAAGGCAATCGAATGTGATTGGACTATGCAGTGCGTGGGGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CCA 90 bp TTTCCATGTGTACATAGGACTTCTTTTGGCAGCCCTCTTGCCAATCTACCTGCATGTGGTCCGACATCTTaGCGCTCCCATCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: FPCVHRTSFGSPLANLPACGPTS*RSHLGA
Trigger: AGCACCCAGATGGGAGCGCCAAGATGTCGGACCACA...TGCAGGTAGATTGGCAAGAGGGCTGCCAAAAGAAGTCCTATGTACACATGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR TCA 90 bp ATTGCCTTTAAAAATAGATCACATACATTTGTCTTTCTAGGGTGCAAGGATGCTCCTGGCTGTGCAGGTTaGGCGCCCGGTGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: IAFKNRSHTFVFLGCKDAPGCAG*APGVAT
Trigger: CGTGGCCACACCGGGCGCTCAACCTGCACAGCCAGG...AGCATCCTTGCACCCTAGAAAGACAAATGTATGTGATCTATTTTTAAAGGCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR TCA 90 bp TCAGTTGATACAGTGCTGTTAAGTCCCATGCAAAATTCTGTGAGCTGGCAAGGCCATCCGTCAGGAACTTaGGGTTTCGAGACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SVDTVLLSPMQNSVSWQGHPSGT*GFETGP
Trigger: AGGGCCTGTCTCGAAACCTCAAGTTCCTGACGGATG...GCCTTGCCAGCTCACAGAATTTTGCATGGGACTTAACAGCACTGTATCAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR TCA 90 bp ATTGCCTTTAAAAATAGATCACATACATTTGTCTTTCTAGGGTGCAAGGATGCTGCGCGACCCAGGAATTaGGGCTCGGTGGCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: IAFKNRSHTFVFLGCKDAARPRN*GSVAKP
Trigger: GGGCTTTGCCACCGAGCCTCAATTCCTGGGTCGCGC...AGCATCCTTGCACCCTAGAAAGACAAATGTATGTGATCTATTTTTAAAGGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR GCA 90 bp TCCTCCCCCACGCACTGCATAGTCCAATCACATTCGATTGCCTTTAAAAATAGACCACCAGCTGCATCTTaGCCTTGCAGTGATCACAGA +
Preference number: 4 (lower is better)
Translates to: SSPTHCIVQSHSIAFKNRPPAAS*PCSDHR
Trigger: TCTGTGATCACTGCAAGGGCAAGATGCAGCTGGTGG...TCTATTTTTAAAGGCAATCGAATGTGATTGGACTATGCAGTGCGTGGGGGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CCA 90 bp ATTTCAATCAACAAAATACTCTTTCAATACCCAACCAGCCACTTGAATCAAGGTTGGCACCTCCCAGGATaGCGGTCTGCACCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: ISINKILFQYPTSHLNQGWHLPG*RSAPPC
Trigger: GCAAGGCGGTGCAGACCGCCATCCTGGGAGGTGCCA...ACCTTGATTCAAGTGGCTGGTTGGGTATTGAAAGAGTATTTTGTTGATTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CCA 90 bp TTTCCATGTGTACATAGGACTTCTTTTGGCAGCCCTCTTGCCAATCTACCTGCACTGGCGGTAAAGTCCTaGGTGAAGACCTTTCCCTTA +
Preference number: 4 (lower is better)
Translates to: FPCVHRTSFGSPLANLPALAVKS*VKTFPL
Trigger: TAAGGGAAAGGTCTTCACCCAGGACTTTACCGCCAG...TGCAGGTAGATTGGCAAGAGGGCTGCCAAAAGAAGTCCTATGTACACATGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR TCA 90 bp TTTCCATGTGTACATAGGACTTCTTTTGGCAGCCCTCTTGCCAATCTACCTGCAATCTTGCCCTTGCAGTaGTCACAGATAGATACCAGC +
Preference number: 4 (lower is better)
Translates to: FPCVHRTSFGSPLANLPAILPLQ*SQIDTS
Trigger: GCTGGTATCTATCTGTGATCACTGCAAGGGCAAGAT...TGCAGGTAGATTGGCAAGAGGGCTGCCAAAAGAAGTCCTATGTACACATGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR TCA 90 bp ATTTCAATCAACAAAATACTCTTTCAATACCCAACCAGCCACTTGAATCAAGGTAGAGAAGCGGTCCCGTaGCTTGTCACTGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ISINKILFQYPTSHLNQGREAVP*LVTGQG
Trigger: GCCCTGGCCAGTGACAAGTCACGGGACCGCTTCTCT...ACCTTGATTCAAGTGGCTGGTTGGGTATTGAAAGAGTATTTTGTTGATTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR TCA 90 bp ATTGCCTTTAAAAATAGATCACATACATTTGTCTTTCTAGGGTGCAAGGATGCTGCTGCGCCAGATCCCTaGGGCACTGGGTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: IAFKNRSHTFVFLGCKDAAAPDP*GTGSRA
Trigger: TGCTCTTGACCCAGTGCCTCAGGGATCTGGCGCAGC...AGCATCCTTGCACCCTAGAAAGACAAATGTATGTGATCTATTTTTAAAGGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CCA 90 bp ATTGCCTTTAAAAATAGATCACATACATTTGTCTTTCTAGGGTGCAAGGATGCTCGGCCCATGTTGAGCTaGCTCTGCACGTCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: IAFKNRSHTFVFLGCKDARPMLS*LCTSWV
Trigger: CACCCACGACGTGCAGAGCCAGCTCAACATGGGCCG...AGCATCCTTGCACCCTAGAAAGACAAATGTATGTGATCTATTTTTAAAGGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CCA 90 bp ATTGCCTTTAAAAATAGATCACATACATTTGTCTTTCTAGGGTGCAAGGATGCTCTTGGCGCTCCCATCTaGGTGCTGCGCCAGATCCCT +
Preference number: 4 (lower is better)
Translates to: IAFKNRSHTFVFLGCKDALGAPI*VLRQIP
Trigger: AGGGATCTGGCGCAGCACCCAGATGGGAGCGCCAAG...AGCATCCTTGCACCCTAGAAAGACAAATGTATGTGATCTATTTTTAAAGGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR GCA 90 bp ATTTCAATCAACAAAATACTCTTTCAATACCCAACCAGCCACTTGAATCAAGGTAAAGCGCTCACCGCCTaGACCAAGGGCCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: ISINKILFQYPTSHLNQGKALTA*TKGPLK
Trigger: CTTCAGTGGGCCCTTGGTGCAGGCGGTGAGCGCTTT...ACCTTGATTCAAGTGGCTGGTTGGGTATTGAAAGAGTATTTTGTTGATTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CCA 90 bp ATTTCAATCAACAAAATACTCTTTCAATACCCAACCAGCCACTTGAATCAAGGTCTCCAGCAACAGCTGTaGGGTCATGTCCGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ISINKILFQYPTSHLNQGLQQQL*GHVRQW
Trigger: CCACTGGCGGACATGACCCCACAGCTGTTGCTGGAG...ACCTTGATTCAAGTGGCTGGTTGGGTATTGAAAGAGTATTTTGTTGATTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CCA 90 bp ATTGCCTTTAAAAATAGATCACATACATTTGTCTTTCTAGGGTGCAAGGATGCTCTCAGCCTCTCCCTGTaGTCCGACATCTTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: IAFKNRSHTFVFLGCKDALSLSL*SDILAL
Trigger: GAGCGCCAAGATGTCGGACCACAGGGAGAGGCTGAG...AGCATCCTTGCACCCTAGAAAGACAAATGTATGTGATCTATTTTTAAAGGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR GCA 90 bp ATTGCCTTTAAAAATAGATCACATACATTTGTCTTTCTAGGGTGCAAGGATGCTATGTTGAGCTGGCTCTaGACGTCGTGGGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: IAFKNRSHTFVFLGCKDAMLSWL*TSWVRM
Trigger: CATCCTCACCCACGACGTGCAGAGCCAGCTCAACAT...AGCATCCTTGCACCCTAGAAAGACAAATGTATGTGATCTATTTTTAAAGGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR TCA 90 bp ATTGCCTTTAAAAATAGATCACATACATTTGTCTTTCTAGGGTGCAAGGATGCTCTTTCCCTTAAAGCCTaGGATAGCAGGGTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: IAFKNRSHTFVFLGCKDALSLKA*DSRVQP
Trigger: AGGCTGCACCCTGCTATCTCAGGCTTTAAGGGAAAG...AGCATCCTTGCACCCTAGAAAGACAAATGTATGTGATCTATTTTTAAAGGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
3UTR CAA 72 bp ATCAACAAAATACTCTTTCAATACCCAACCAGCCACTaGAATCAAGGTCATAAAAACAAGCCCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: INKILFQYPTSH*NQGHKNKPSTD
Trigger: GTCAGTGGAGGGCTTGTTTTTATGACCTTGATTCAAGTGGCTGGTTGGGTATTGAAAGAGTATTTTGTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 90 bp GTGGCGGCAGCGTGTCACACGGTAGCGGTCCACAAGGCCTGGCTGTaGAGGTTGAGCGCCCGGTGTGGCCACGGCTGCCAGGTAGGCCGC +
Preference number: 5 (lower is better)
Translates to: VAAACHTVAVHKAWL*RLSARCGHGCQVGR
Trigger: GCGGCCTACCTGGCAGCCGTGGCCACACCGGGCGCTCAACCTGCACAGCCAGGCCTTGTGGACCGCTACCGTGTGACACGCTGCCGCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 90 bp ACGCAGGCCGACACCACACTCATGGCACCTCCCAGGATGGCGGTCTaGACCGCCTTGCCCTCAGTGCTCACGGCAGCTGCGCGACCCAGG +
Preference number: 5 (lower is better)
Translates to: TQADTTLMAPPRMAV*TALPSVLTAAARPR
Trigger: CCTGGGTCGCGCAGCTGCCGTGAGCACTGAGGGCAAGGCGGTGCAGACCGCCATCCTGGGAGGTGCCATGAGTGTGGTGTCGGCCTGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 90 bp TACCTCGTGGCGGCAGCGTGTCACACGGTAGCGGTCCACAAGGCCTaGCTGTGCAGGTTGAGCGCCCGGTGTGGCCACGGCTGCCAGGTA +
Preference number: 5 (lower is better)
Translates to: YLVAAACHTVAVHKA*LCRLSARCGHGCQV
Trigger: TACCTGGCAGCCGTGGCCACACCGGGCGCTCAACCTGCACAGCCAGGCCTTGTGGACCGCTACCGTGTGACACGCTGCCGCCACGAGGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS TCA 90 bp ACCGCCTTGCCCTCAGTGCTCACGGCAGCTGCGCGACCCAGGAATTaGGGCTCGGTGGCAAAGCCCACCAAAGCGCTCACCGCCTGCACC +
Preference number: 5 (lower is better)
Translates to: TALPSVLTAAARPRN*GSVAKPTKALTACT
Trigger: GGTGCAGGCGGTGAGCGCTTTGGTGGGCTTTGCCACCGAGCCTCAATTCCTGGGTCGCGCAGCTGCCGTGAGCACTGAGGGCAAGGCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 90 bp CACAAGGCCTGGCTGTGCAGGTTGAGCGCCCGGTGTGGCCACGGCTaGCAGGTAGGCCGCATGTGCAGAACACTCGGTCAGCGACACCAC +
Preference number: 5 (lower is better)
Translates to: HKAWLCRLSARCGHG*QVGRMCRTLGQRHH
Trigger: GTGGTGTCGCTGACCGAGTGTTCTGCACATGCGGCCTACCTGGCAGCCGTGGCCACACCGGGCGCTCAACCTGCACAGCCAGGCCTTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 90 bp GGTAGCGGTCCACAAGGCCTGGCTGTGCAGGTTGAGCGCCCGGTGTaGCCACGGCTGCCAGGTAGGCCGCATGTGCAGAACACTCGGTCA +
Preference number: 5 (lower is better)
Translates to: GSGPQGLAVQVERPV*PRLPGRPHVQNTRS
Trigger: TGACCGAGTGTTCTGCACATGCGGCCTACCTGGCAGCCGTGGCCACACCGGGCGCTCAACCTGCACAGCCAGGCCTTGTGGACCGCTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 90 bp CCTCAGTGCTCACGGCAGCTGCGCGACCCAGGAATTGAGGCTCGGTaGCAAAGCCCACCAAAGCGCTCACCGCCTGCACCAAGGGCCCAC +
Preference number: 5 (lower is better)
Translates to: PQCSRQLRDPGIEAR*QSPPKRSPPAPRAH
Trigger: GTGGGCCCTTGGTGCAGGCGGTGAGCGCTTTGGTGGGCTTTGCCACCGAGCCTCAATTCCTGGGTCGCGCAGCTGCCGTGAGCACTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 90 bp TCAAGAGCACGCAGGCCGACACCACACTCATGGCACCTCCCAGGATaGCGGTCTGCACCGCCTTGCCCTCAGTGCTCACGGCAGCTGCGC +
Preference number: 5 (lower is better)
Translates to: SRARRPTPHSWHLPG*RSAPPCPQCSRQLR
Trigger: GCGCAGCTGCCGTGAGCACTGAGGGCAAGGCGGTGCAGACCGCCATCCTGGGAGGTGCCATGAGTGTGGTGTCGGCCTGCGTGCTCTTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 90 bp AGGTTGAGCGCCCGGTGTGGCCACGGCTGCCAGGTAGGCCGCATGTaGAGAACACTCGGTCAGCGACACCACCAAGTCGCCCAGTTCCAC +
Preference number: 5 (lower is better)
Translates to: RLSARCGHGCQVGRM*RTLGQRHHQVAQFH
Trigger: GTGGAACTGGGCGACTTGGTGGTGTCGCTGACCGAGTGTTCTGCACATGCGGCCTACCTGGCAGCCGTGGCCACACCGGGCGCTCAACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 90 bp TCATGGCACCTCCCAGGATGGCGGTCTGCACCGCCTTGCCCTCAGTaGTCACGGCAGCTGCGCGACCCAGGAATTGAGGCTCGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: SWHLPGWRSAPPCPQ*SRQLRDPGIEARWQ
Trigger: TTGCCACCGAGCCTCAATTCCTGGGTCGCGCAGCTGCCGTGAGCACTGAGGGCAAGGCGGTGCAGACCGCCATCCTGGGAGGTGCCATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 90 bp AGCCTCTCCCTGTGGTCCGACATCTTGGCGCTCCCATCTGGGTGCTaGGCCAGATCCCTGAGGCACTGGGTCAAGAGCACGCAGGCCGAC +
Preference number: 5 (lower is better)
Translates to: SLSLWSDILALPSGC*ARSLRHWVKSTQAD
Trigger: GTCGGCCTGCGTGCTCTTGACCCAGTGCCTCAGGGATCTGGCGCAGCACCCAGATGGGAGCGCCAAGATGTCGGACCACAGGGAGAGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 90 bp CTCAGCCTCTCCCTGTGGTCCGACATCTTGGCGCTCCCATCTGGGTaGTGCGCCAGATCCCTGAGGCACTGGGTCAAGAGCACGCAGGCC +
Preference number: 5 (lower is better)
Translates to: LSLSLWSDILALPSG*CARSLRHWVKSTQA
Trigger: GGCCTGCGTGCTCTTGACCCAGTGCCTCAGGGATCTGGCGCAGCACCCAGATGGGAGCGCCAAGATGTCGGACCACAGGGAGAGGCTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 90 bp CCCGCCTCTCCGAAGCGGCCCATGTTGAGCTGGCTCTGCACGTCGTaGGTGAGGATGGACAGCCCCTTAGTGCGCGCGATGATGGTGTCC +
Preference number: 5 (lower is better)
Translates to: PASPKRPMLSWLCTS*VRMDSPLVRAMMVS
Trigger: GGACACCATCATCGCGCGCACTAAGGGGCTGTCCATCCTCACCCACGACGTGCAGAGCCAGCTCAACATGGGCCGCTTCGGAGAGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 90 bp GCGACACCTCCAGCAACAGCTGTGGGGTCATGTCCGCCAGTGGGGTaGCTCGCAGCACAGCACAGCCTTGTTCTACCTCGTGGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: ATPPATAVGSCPPVG*LAAQHSLVLPRGGS
Trigger: GCTGCCGCCACGAGGTAGAACAAGGCTGTGCTGTGCTGCGAGCCACCCCACTGGCGGACATGACCCCACAGCTGTTGCTGGAGGTGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 90 bp GCCCTGCGACACCTCCAGCAACAGCTGTGGGGTCATGTCCGCCAGTaGGGTGGCTCGCAGCACAGCACAGCCTTGTTCTACCTCGTGGCG +
Preference number: 5 (lower is better)
Translates to: ALRHLQQQLWGHVRQ*GGSQHSTALFYLVA
Trigger: CGCCACGAGGTAGAACAAGGCTGTGCTGTGCTGCGAGCCACCCCACTGGCGGACATGACCCCACAGCTGTTGCTGGAGGTGTCGCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 90 bp CAGCCTTCAGACACGGCGCAGGCCGAGTTCCTCAGCCTCTCCCTGTaGTCCGACATCTTGGCGCTCCCATCTGGGTGCTGCGCCAGATCC +
Preference number: 5 (lower is better)
Translates to: QPSDTAQAEFLSLSL*SDILALPSGCCARS
Trigger: GGATCTGGCGCAGCACCCAGATGGGAGCGCCAAGATGTCGGACCACAGGGAGAGGCTGAGGAACTCGGCCTGCGCCGTGTCTGAAGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS TCA 90 bp GGTCCGACATCTTGGCGCTCCCATCTGGGTGCTGCGCCAGATCCCTaGGGCACTGGGTCAAGAGCACGCAGGCCGACACCACACTCATGG +
Preference number: 5 (lower is better)
Translates to: GPTSWRSHLGAAPDP*GTGSRARRPTPHSW
Trigger: CCATGAGTGTGGTGTCGGCCTGCGTGCTCTTGACCCAGTGCCTCAGGGATCTGGCGCAGCACCCAGATGGGAGCGCCAAGATGTCGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 90 bp AGACTGTCTCCCGCCTCTCCGAAGCGGCCCATGTTGAGCTGGCTCTaGACGTCGTGGGTGAGGATGGACAGCCCCTTAGTGCGCGCGATG +
Preference number: 5 (lower is better)
Translates to: RLSPASPKRPMLSWL*TSWVRMDSPLVRAM
Trigger: CATCGCGCGCACTAAGGGGCTGTCCATCCTCACCCACGACGTGCAGAGCCAGCTCAACATGGGCCGCTTCGGAGAGGCGGGAGACAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 90 bp ACACCACACTCATGGCACCTCCCAGGATGGCGGTCTGCACCGCCTTaGCCTCAGTGCTCACGGCAGCTGCGCGACCCAGGAATTGAGGCT +
Preference number: 5 (lower is better)
Translates to: TPHSWHLPGWRSAPP*PQCSRQLRDPGIEA
Trigger: AGCCTCAATTCCTGGGTCGCGCAGCTGCCGTGAGCACTGAGGGCAAGGCGGTGCAGACCGCCATCCTGGGAGGTGCCATGAGTGTGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 90 bp CTTGAGGTTTCGAGACAGGCCCTGCGACACCTCCAGCAACAGCTGTaGGGTCATGTCCGCCAGTGGGGTGGCTCGCAGCACAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: LEVSRQALRHLQQQL*GHVRQWGGSQHSTA
Trigger: GGCTGTGCTGTGCTGCGAGCCACCCCACTGGCGGACATGACCCCACAGCTGTTGCTGGAGGTGTCGCAGGGCCTGTCTCGAAACCTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 90 bp ATCTTGGCGCTCCCATCTGGGTGCTGCGCCAGATCCCTGAGGCACTaGGTCAAGAGCACGCAGGCCGACACCACACTCATGGCACCTCCC +
Preference number: 5 (lower is better)
Translates to: ILALPSGCCARSLRH*VKSTQADTTLMAPP
Trigger: GGGAGGTGCCATGAGTGTGGTGTCGGCCTGCGTGCTCTTGACCCAGTGCCTCAGGGATCTGGCGCAGCACCCAGATGGGAGCGCCAAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 90 bp AGGGCGCACGCATCCGTCAGGAACTTGAGGTTTCGAGACAGGCCCTaGGACACCTCCAGCAACAGCTGTGGGGTCATGTCCGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: RAHASVRNLRFRDRP*DTSSNSCGVMSASG
Trigger: CCCACTGGCGGACATGACCCCACAGCTGTTGCTGGAGGTGTCGCAGGGCCTGTCTCGAAACCTCAAGTTCCTGACGGATGCGTGCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 90 bp TCCACAAGACTGTCTCCCGCCTCTCCGAAGCGGCCCATGTTGAGCTaGCTCTGCACGTCGTGGGTGAGGATGGACAGCCCCTTAGTGCGC +
Preference number: 5 (lower is better)
Translates to: STRLSPASPKRPMLS*LCTSWVRMDSPLVR
Trigger: GCGCACTAAGGGGCTGTCCATCCTCACCCACGACGTGCAGAGCCAGCTCAACATGGGCCGCTTCGGAGAGGCGGGAGACAGTCTTGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 90 bp GTTCCTCAGCCTCTCCCTGTGGTCCGACATCTTGGCGCTCCCATCTaGGTGCTGCGCCAGATCCCTGAGGCACTGGGTCAAGAGCACGCA +
Preference number: 5 (lower is better)
Translates to: VPQPLPVVRHLGAPI*VLRQIPEALGQEHA
Trigger: TGCGTGCTCTTGACCCAGTGCCTCAGGGATCTGGCGCAGCACCCAGATGGGAGCGCCAAGATGTCGGACCACAGGGAGAGGCTGAGGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS TCA 90 bp CCCGTGACTTGTCACTGGCCAGGGCGCACGCATCCGTCAGGAACTTaGGGTTTCGAGACAGGCCCTGCGACACCTCCAGCAACAGCTGTG +
Preference number: 5 (lower is better)
Translates to: PVTCHWPGRTHPSGT*GFETGPATPPATAV
Trigger: CACAGCTGTTGCTGGAGGTGTCGCAGGGCCTGTCTCGAAACCTCAAGTTCCTGACGGATGCGTGCGCCCTGGCCAGTGACAAGTCACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS TCA 90 bp GCACTTGACGCCCAGCTTGAACTGTTCGCGAGAGAAGCGGTCCCGTaGCTTGTCACTGGCCAGGGCGCACGCATCCGTCAGGAACTTGAG +
Preference number: 5 (lower is better)
Translates to: ALDAQLELFAREAVP*LVTGQGARIRQELE
Trigger: CTCAAGTTCCTGACGGATGCGTGCGCCCTGGCCAGTGACAAGTCACGGGACCGCTTCTCTCGCGAACAGTTCAAGCTGGGCGTCAAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CAA 90 bp CCTATAGTGGGCTGGTGGACACCCAGGCCCTCTGAGTACTTGATGATTGCATGGAAGCGGTCCCGTGACTaGTCACTGGCCAGGGCGCAC +
Preference number: 5 (lower is better)
Translates to: PIVGWWTPRPSEYLMIAWKRSRD*SLARAH
Trigger: GTGCGCCCTGGCCAGTGACAAGTCACGGGACCGCTT...CCATGCAATCATCAAGTACTCAGAGGGCCTGGGTGTCCACCAGCCCACTATAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS TCA 90 bp TTCACTGGCGGTAAAGTCCTGGGTGAAGACCTTTCCCTTAAAGCCTaGGATAGCAGGGTGCAGCCTTCAGACACGGCGCAGGCCGAGTTC +
Preference number: 5 (lower is better)
Translates to: FTGGKVLGEDLSLKA*DSRVQPSDTAQAEF
Trigger: GAACTCGGCCTGCGCCGTGTCTGAAGGCTGCACCCTGCTATCTCAGGCTTTAAGGGAAAGGTCTTCACCCAGGACTTTACCGCCAGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CAA 90 bp TACCCAACCAGCCACTTGAATCAAGGTCATAAAAACAAGCCCTCCACTGACAAGGCGGTCTGCACCGCCTaGCCCTCAGTGCTCACGGCA +
Preference number: 5 (lower is better)
Translates to: YPTSHLNQGHKNKPSTDKAVCTA*PSVLTA
Trigger: TGCCGTGAGCACTGAGGGCAAGGCGGTGCAGACCGC...CTTGTCAGTGGAGGGCTTGTTTTTATGACCTTGATTCAAGTGGCTGGTTGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CAA 90 bp TACCCAACCAGCCACTTGAATCAAGGTCATAAAAACAAGCCCTCCACTGACAAGCCGAAGCGGCCCATGTaGAGCTGGCTCTGCACGTCG +
Preference number: 5 (lower is better)
Translates to: YPTSHLNQGHKNKPSTDKPKRPM*SWLCTS
Trigger: CGACGTGCAGAGCCAGCTCAACATGGGCCGCTTCGG...CTTGTCAGTGGAGGGCTTGTTTTTATGACCTTGATTCAAGTGGCTGGTTGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CAA 90 bp GTTAATGTCATGCAAGGAGATAGGGCAAGTCTTTTTGCCTTTTGGCTTGCAGTTGCCTGGCTGTGCAGGTaGAGCGCCCGGTGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: VNVMQGDRASLFAFWLAVAWLCR*SARCGH
Trigger: GTGGCCACACCGGGCGCTCAACCTGCACAGCCAGGC...AACTGCAAGCCAAAAGGCAAAAAGACTTGCCCTATCTCCTTGCATGACATTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CAA 90 bp TCAGTTGATACAGTGCTGTTAAGTCCCATGCAAAATTCTGTGAGCTGGCAAGGCCTGTGGTCCGACATCTaGGCGCTCCCATCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: SVDTVLLSPMQNSVSWQGLWSDI*ALPSGC
Trigger: GCACCCAGATGGGAGCGCCAAGATGTCGGACCACAG...GCCTTGCCAGCTCACAGAATTTTGCATGGGACTTAACAGCACTGTATCAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CAA 90 bp TCAGTTGATACAGTGCTGTTAAGTCCCATGCAAAATTCTGTGAGCTGGCAAGGCGCATCCGTCAGGAACTaGAGGTTTCGAGACAGGCCC +
Preference number: 5 (lower is better)
Translates to: SVDTVLLSPMQNSVSWQGASVRN*RFRDRP
Trigger: GGGCCTGTCTCGAAACCTCAAGTTCCTGACGGATGC...GCCTTGCCAGCTCACAGAATTTTGCATGGGACTTAACAGCACTGTATCAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CAA 90 bp GTTAATGTCATGCAAGGAGATAGGGCAAGTCTTTTTGCCTTTTGGCTTGCAGTTTGCGCGACCCAGGAATaGAGGCTCGGTGGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: VNVMQGDRASLFAFWLAVCATQE*RLGGKA
Trigger: GGCTTTGCCACCGAGCCTCAATTCCTGGGTCGCGCA...AACTGCAAGCCAAAAGGCAAAAAGACTTGCCCTATCTCCTTGCATGACATTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CAA 90 bp TCAGTTGATACAGTGCTGTTAAGTCCCATGCAAAATTCTGTGAGCTGGCAAGGCCTTGTGCTCATGCACTaGACGCCCAGCTTGAACTGT +
Preference number: 5 (lower is better)
Translates to: SVDTVLLSPMQNSVSWQGLVLMH*TPSLNC
Trigger: ACAGTTCAAGCTGGGCGTCAAGTGCATGAGCACAAG...GCCTTGCCAGCTCACAGAATTTTGCATGGGACTTAACAGCACTGTATCAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS-3UTR CAA 90 bp ATTTCAATCAACAAAATACTCTTTCAATACCCAACCAGCCACTTGAATCAAGGTCACTTGACGCCCAGCTaGAACTGTTCGCGAGAGAAG +
Preference number: 5 (lower is better)
Translates to: ISINKILFQYPTSHLNQGHLTPS*NCSREK
Trigger: CTTCTCTCGCGAACAGTTCAAGCTGGGCGTCAAGTG...ACCTTGATTCAAGTGGCTGGTTGGGTATTGAAAGAGTATTTTGTTGATTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 72 bp GCGGCAGCGTGTCACACGGTAGCGGTCCACAAGGCCTaGCTGTGCAGGTTGAGCGCCCGGTGTGGCCACGGC +
Preference number: 6 (lower is better)
Translates to: AAACHTVAVHKA*LCRLSARCGHG
Trigger: GCCGTGGCCACACCGGGCGCTCAACCTGCACAGCCAGGCCTTGTGGACCGCTACCGTGTGACACGCTGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CAA 90 bp GCAGCGTGTCACACGGTAGCGGTCCACAAGGCCTGGCTGTGCAGGTaGAGCGCCCGGTGTGGCCACGGCTGCCAGGTAGGCCGCATGTGC +
Preference number: 6 (lower is better)
Translates to: AACHTVAVHKAWLCR*SARCGHGCQVGRMC
Trigger: GCACATGCGGCCTACCTGGCAGCCGTGGCCACACCGGGCGCTCAACCTGCACAGCCAGGCCTTGTGGACCGCTACCGTGTGACACGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 72 bp AGCCCCTTAGTGCGCGCGATGATGGTGTCCCGGCACTaGTCGAAGGACTCCGCACCAGCGCCAGGGGAGGCG +
Preference number: 6 (lower is better)
Translates to: SPLVRAMMVSRH*SKDSAPAPGEA
Trigger: CGCCTCCCCTGGCGCTGGTGCGGAGTCCTTCGAGCAGTGCCGGGACACCATCATCGCGCGCACTAAGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 72 bp GCGTGTCACACGGTAGCGGTCCACAAGGCCTGGCTGTaGAGGTTGAGCGCCCGGTGTGGCCACGGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: ACHTVAVHKAWL*RLSARCGHGCQ
Trigger: CTGGCAGCCGTGGCCACACCGGGCGCTCAACCTGCACAGCCAGGCCTTGTGGACCGCTACCGTGTGACACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CAA 72 bp CTCATGGCACCTCCCAGGATGGCGGTCTGCACCGCCTaGCCCTCAGTGCTCACGGCAGCTGCGCGACCCAGG +
Preference number: 6 (lower is better)
Translates to: LMAPPRMAVCTA*PSVLTAAARPR
Trigger: CCTGGGTCGCGCAGCTGCCGTGAGCACTGAGGGCAAGGCGGTGCAGACCGCCATCCTGGGAGGTGCCATGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 72 bp GCCCGGTGTGGCCACGGCTGCCAGGTAGGCCGCATGTaGAGAACACTCGGTCAGCGACACCACCAAGTCGCC +
Preference number: 6 (lower is better)
Translates to: ARCGHGCQVGRM*RTLGQRHHQVA
Trigger: GGCGACTTGGTGGTGTCGCTGACCGAGTGTTCTGCACATGCGGCCTACCTGGCAGCCGTGGCCACACCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 72 bp TCATGGCACCTCCCAGGATGGCGGTCTGCACCGCCTTaGCCTCAGTGCTCACGGCAGCTGCGCGACCCAGGA +
Preference number: 6 (lower is better)
Translates to: SWHLPGWRSAPP*PQCSRQLRDPG
Trigger: TCCTGGGTCGCGCAGCTGCCGTGAGCACTGAGGGCAAGGCGGTGCAGACCGCCATCCTGGGAGGTGCCATGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 72 bp CGCAGGCCGACACCACACTCATGGCACCTCCCAGGATaGCGGTCTGCACCGCCTTGCCCTCAGTGCTCACGG +
Preference number: 6 (lower is better)
Translates to: RRPTPHSWHLPG*RSAPPCPQCSR
Trigger: CCGTGAGCACTGAGGGCAAGGCGGTGCAGACCGCCATCCTGGGAGGTGCCATGAGTGTGGTGTCGGCCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CAA 90 bp CACCGCCTTGCCCTCAGTGCTCACGGCAGCTGCGCGACCCAGGAATaGAGGCTCGGTGGCAAAGCCCACCAAAGCGCTCACCGCCTGCAC +
Preference number: 6 (lower is better)
Translates to: HRLALSAHGSCATQE*RLGGKAHQSAHRLH
Trigger: GTGCAGGCGGTGAGCGCTTTGGTGGGCTTTGCCACCGAGCCTCAATTCCTGGGTCGCGCAGCTGCCGTGAGCACTGAGGGCAAGGCGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CAA 90 bp ACGGCGCAGGCCGAGTTCCTCAGCCTCTCCCTGTGGTCCGACATCTaGGCGCTCCCATCTGGGTGCTGCGCCAGATCCCTGAGGCACTGG +
Preference number: 6 (lower is better)
Translates to: TAQAEFLSLSLWSDI*ALPSGCCARSLRHW
Trigger: CCAGTGCCTCAGGGATCTGGCGCAGCACCCAGATGGGAGCGCCAAGATGTCGGACCACAGGGAGAGGCTGAGGAACTCGGCCTGCGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 72 bp TGGCTGTGCAGGTTGAGCGCCCGGTGTGGCCACGGCTaGCAGGTAGGCCGCATGTGCAGAACACTCGGTCAG +
Preference number: 6 (lower is better)
Translates to: WLCRLSARCGHG*QVGRMCRTLGQ
Trigger: CTGACCGAGTGTTCTGCACATGCGGCCTACCTGGCAGCCGTGGCCACACCGGGCGCTCAACCTGCACAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 72 bp GGCTCGGTGGCAAAGCCCACCAAAGCGCTCACCGCCTaGACCAAGGGCCCACTGAAGAGCGCGCAACGACTG +
Preference number: 6 (lower is better)
Translates to: GSVAKPTKALTA*TKGPLKSAQRL
Trigger: CAGTCGTTGCGCGCTCTTCAGTGGGCCCTTGGTGCAGGCGGTGAGCGCTTTGGTGGGCTTTGCCACCGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 72 bp GGTCTGCACCGCCTTGCCCTCAGTGCTCACGGCAGCTaGGCGACCCAGGAATTGAGGCTCGGTGGCAAAGCC +
Preference number: 6 (lower is better)
Translates to: GLHRLALSAHGS*ATQELRLGGKA
Trigger: GGCTTTGCCACCGAGCCTCAATTCCTGGGTCGCGCAGCTGCCGTGAGCACTGAGGGCAAGGCGGTGCAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 72 bp CTCCCAGGATGGCGGTCTGCACCGCCTTGCCCTCAGTaGTCACGGCAGCTGCGCGACCCAGGAATTGAGGCT +
Preference number: 6 (lower is better)
Translates to: LPGWRSAPPCPQ*SRQLRDPGIEA
Trigger: AGCCTCAATTCCTGGGTCGCGCAGCTGCCGTGAGCACTGAGGGCAAGGCGGTGCAGACCGCCATCCTGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 72 bp CTGTCTCCCGCCTCTCCGAAGCGGCCCATGTTGAGCTaGCTCTGCACGTCGTGGGTGAGGATGGACAGCCCC +
Preference number: 6 (lower is better)
Translates to: LSPASPKRPMLS*LCTSWVRMDSP
Trigger: GGGGCTGTCCATCCTCACCCACGACGTGCAGAGCCAGCTCAACATGGGCCGCTTCGGAGAGGCGGGAGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 72 bp TCGAGACAGGCCCTGCGACACCTCCAGCAACAGCTGTaGGGTCATGTCCGCCAGTGGGGTGGCTCGCAGCAC +
Preference number: 6 (lower is better)
Translates to: SRQALRHLQQQL*GHVRQWGGSQH
Trigger: GTGCTGCGAGCCACCCCACTGGCGGACATGACCCCACAGCTGTTGCTGGAGGTGTCGCAGGGCCTGTCTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 72 bp GACACGGCGCAGGCCGAGTTCCTCAGCCTCTCCCTGTaGTCCGACATCTTGGCGCTCCCATCTGGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: DTAQAEFLSLSL*SDILALPSGCC
Trigger: GCAGCACCCAGATGGGAGCGCCAAGATGTCGGACCACAGGGAGAGGCTGAGGAACTCGGCCTGCGCCGTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS TCA 72 bp CCCTCAGTGCTCACGGCAGCTGCGCGACCCAGGAATTaGGGCTCGGTGGCAAAGCCCACCAAAGCGCTCACC +
Preference number: 6 (lower is better)
Translates to: PSVLTAAARPRN*GSVAKPTKALT
Trigger: GGTGAGCGCTTTGGTGGGCTTTGCCACCGAGCCTCAATTCCTGGGTCGCGCAGCTGCCGTGAGCACTGAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS TCA 72 bp TCTTGGCGCTCCCATCTGGGTGCTGCGCCAGATCCCTaGGGCACTGGGTCAAGAGCACGCAGGCCGACACCA +
Preference number: 6 (lower is better)
Translates to: SWRSHLGAAPDP*GTGSRARRPTP
Trigger: TGGTGTCGGCCTGCGTGCTCTTGACCCAGTGCCTCAGGGATCTGGCGCAGCACCCAGATGGGAGCGCCAAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 72 bp CCCGCCTCTCCGAAGCGGCCCATGTTGAGCTGGCTCTaGACGTCGTGGGTGAGGATGGACAGCCCCTTAGTG +
Preference number: 6 (lower is better)
Translates to: PASPKRPMLSWL*TSWVRMDSPLV
Trigger: CACTAAGGGGCTGTCCATCCTCACCCACGACGTGCAGAGCCAGCTCAACATGGGCCGCTTCGGAGAGGCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 72 bp CCGAAGCGGCCCATGTTGAGCTGGCTCTGCACGTCGTaGGTGAGGATGGACAGCCCCTTAGTGCGCGCGATG +
Preference number: 6 (lower is better)
Translates to: PKRPMLSWLCTS*VRMDSPLVRAM
Trigger: CATCGCGCGCACTAAGGGGCTGTCCATCCTCACCCACGACGTGCAGAGCCAGCTCAACATGGGCCGCTTCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 72 bp TCACGGCAGCTGCGCGACCCAGGAATTGAGGCTCGGTaGCAAAGCCCACCAAAGCGCTCACCGCCTGCACCA +
Preference number: 6 (lower is better)
Translates to: SRQLRDPGIEAR*QSPPKRSPPAP
Trigger: TGGTGCAGGCGGTGAGCGCTTTGGTGGGCTTTGCCACCGAGCCTCAATTCCTGGGTCGCGCAGCTGCCGTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CAA 72 bp GCCCTCAGTGCTCACGGCAGCTGCGCGACCCAGGAATaGAGGCTCGGTGGCAAAGCCCACCAAAGCGCTCAC +
Preference number: 6 (lower is better)
Translates to: ALSAHGSCATQE*RLGGKAHQSAH
Trigger: GTGAGCGCTTTGGTGGGCTTTGCCACCGAGCCTCAATTCCTGGGTCGCGCAGCTGCCGTGAGCACTGAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS TCA 72 bp GCCCAGCTTGAACTGTTCGCGAGAGAAGCGGTCCCGTaGCTTGTCACTGGCCAGGGCGCACGCATCCGTCAG +
Preference number: 6 (lower is better)
Translates to: AQLELFAREAVP*LVTGQGARIRQ
Trigger: CTGACGGATGCGTGCGCCCTGGCCAGTGACAAGTCACGGGACCGCTTCTCTCGCGAACAGTTCAAGCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 72 bp CTGTGGTCCGACATCTTGGCGCTCCCATCTGGGTGCTaGGCCAGATCCCTGAGGCACTGGGTCAAGAGCACG +
Preference number: 6 (lower is better)
Translates to: LWSDILALPSGC*ARSLRHWVKST
Trigger: CGTGCTCTTGACCCAGTGCCTCAGGGATCTGGCGCAGCACCCAGATGGGAGCGCCAAGATGTCGGACCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 72 bp TCCCTGTGGTCCGACATCTTGGCGCTCCCATCTGGGTaGTGCGCCAGATCCCTGAGGCACTGGGTCAAGAGC +
Preference number: 6 (lower is better)
Translates to: SLWSDILALPSG*CARSLRHWVKS
Trigger: GCTCTTGACCCAGTGCCTCAGGGATCTGGCGCAGCACCCAGATGGGAGCGCCAAGATGTCGGACCACAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 72 bp CTCCCATCTGGGTGCTGCGCCAGATCCCTGAGGCACTaGGTCAAGAGCACGCAGGCCGACACCACACTCATG +
Preference number: 6 (lower is better)
Translates to: LPSGCCARSLRH*VKSTQADTTLM
Trigger: CATGAGTGTGGTGTCGGCCTGCGTGCTCTTGACCCAGTGCCTCAGGGATCTGGCGCAGCACCCAGATGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 72 bp CCTCTCCCTGTGGTCCGACATCTTGGCGCTCCCATCTaGGTGCTGCGCCAGATCCCTGAGGCACTGGGTCAA +
Preference number: 6 (lower is better)
Translates to: PLPVVRHLGAPI*VLRQIPEALGQ
Trigger: TTGACCCAGTGCCTCAGGGATCTGGCGCAGCACCCAGATGGGAGCGCCAAGATGTCGGACCACAGGGAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CAA 90 bp CCCAGTTCCACAAGACTGTCTCCCGCCTCTCCGAAGCGGCCCATGTaGAGCTGGCTCTGCACGTCGTGGGTGAGGATGGACAGCCCCTTA +
Preference number: 6 (lower is better)
Translates to: PSSTRLSPASPKRPM*SWLCTSWVRMDSPL
Trigger: TAAGGGGCTGTCCATCCTCACCCACGACGTGCAGAGCCAGCTCAACATGGGCCGCTTCGGAGAGGCGGGAGACAGTCTTGTGGAACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS TCA 72 bp TGTCACTGGCCAGGGCGCACGCATCCGTCAGGAACTTaGGGTTTCGAGACAGGCCCTGCGACACCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: CHWPGRTHPSGT*GFETGPATPPA
Trigger: TGCTGGAGGTGTCGCAGGGCCTGTCTCGAAACCTCAAGTTCCTGACGGATGCGTGCGCCCTGGCCAGTGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 72 bp CCAGCAACAGCTGTGGGGTCATGTCCGCCAGTGGGGTaGCTCGCAGCACAGCACAGCCTTGTTCTACCTCGT +
Preference number: 6 (lower is better)
Translates to: PATAVGSCPPVG*LAAQHSLVLPR
Trigger: ACGAGGTAGAACAAGGCTGTGCTGTGCTGCGAGCCACCCCACTGGCGGACATGACCCCACAGCTGTTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CAA 72 bp ACAAGACTGTCTCCCGCCTCTCCGAAGCGGCCCATGTaGAGCTGGCTCTGCACGTCGTGGGTGAGGATGGAC +
Preference number: 6 (lower is better)
Translates to: TRLSPASPKRPM*SWLCTSWVRMD
Trigger: GTCCATCCTCACCCACGACGTGCAGAGCCAGCTCAACATGGGCCGCTTCGGAGAGGCGGGAGACAGTCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CAA 72 bp TTGTCACTGGCCAGGGCGCACGCATCCGTCAGGAACTaGAGGTTTCGAGACAGGCCCTGCGACACCTCCAGC +
Preference number: 6 (lower is better)
Translates to: LSLARAHASVRN*RFRDRPCDTSS
Trigger: GCTGGAGGTGTCGCAGGGCCTGTCTCGAAACCTCAAGTTCCTGACGGATGCGTGCGCCCTGGCCAGTGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CAA 90 bp TCCCGTGACTTGTCACTGGCCAGGGCGCACGCATCCGTCAGGAACTaGAGGTTTCGAGACAGGCCCTGCGACACCTCCAGCAACAGCTGT +
Preference number: 6 (lower is better)
Translates to: SRDLSLARAHASVRN*RFRDRPCDTSSNSC
Trigger: ACAGCTGTTGCTGGAGGTGTCGCAGGGCCTGTCTCGAAACCTCAAGTTCCTGACGGATGCGTGCGCCCTGGCCAGTGACAAGTCACGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CAA 72 bp AGCTTGAACTGTTCGCGAGAGAAGCGGTCCCGTGACTaGTCACTGGCCAGGGCGCACGCATCCGTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: SLNCSREKRSRD*SLARAHASVRN
Trigger: GTTCCTGACGGATGCGTGCGCCCTGGCCAGTGACAAGTCACGGGACCGCTTCTCTCGCGAACAGTTCAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS GCA 72 bp GCATCCGTCAGGAACTTGAGGTTTCGAGACAGGCCCTaGGACACCTCCAGCAACAGCTGTGGGGTCATGTCC +
Preference number: 6 (lower is better)
Translates to: ASVRNLRFRDRP*DTSSNSCGVMS
Trigger: GGACATGACCCCACAGCTGTTGCTGGAGGTGTCGCAGGGCCTGTCTCGAAACCTCAAGTTCCTGACGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CAA 90 bp TTGACGCCCAGCTTGAACTGTTCGCGAGAGAAGCGGTCCCGTGACTaGTCACTGGCCAGGGCGCACGCATCCGTCAGGAACTTGAGGTTT +
Preference number: 6 (lower is better)
Translates to: LTPSLNCSREKRSRD*SLARAHASVRNLRF
Trigger: AAACCTCAAGTTCCTGACGGATGCGTGCGCCCTGGCCAGTGACAAGTCACGGGACCGCTTCTCTCGCGAACAGTTCAAGCTGGGCGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CAA 90 bp GCTAACAGCGCGGATGCACTTGTGCTCATGCACTTGACGCCCAGCTaGAACTGTTCGCGAGAGAAGCGGTCCCGTGACTTGTCACTGGCC +
Preference number: 6 (lower is better)
Translates to: ANSADALVLMHLTPS*NCSREKRSRDLSLA
Trigger: GGCCAGTGACAAGTCACGGGACCGCTTCTCTCGCGAACAGTTCAAGCTGGGCGTCAAGTGCATGAGCACAAGTGCATCCGCGCTGTTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CAA 90 bp TCGCGTACGCATGCTAACAGCGCGGATGCACTTGTGCTCATGCACTaGACGCCCAGCTTGAACTGTTCGCGAGAGAAGCGGTCCCGTGAC +
Preference number: 6 (lower is better)
Translates to: SRTHANSADALVLMH*TPSLNCSREKRSRD
Trigger: GTCACGGGACCGCTTCTCTCGCGAACAGTTCAAGCTGGGCGTCAAGTGCATGAGCACAAGTGCATCCGCGCTGTTAGCATGCGTACGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CAA 72 bp GCGGATGCACTTGTGCTCATGCACTTGACGCCCAGCTaGAACTGTTCGCGAGAGAAGCGGTCCCGTGACTTG +
Preference number: 6 (lower is better)
Translates to: ADALVLMHLTPS*NCSREKRSRDL
Trigger: CAAGTCACGGGACCGCTTCTCTCGCGAACAGTTCAAGCTGGGCGTCAAGTGCATGAGCACAAGTGCATCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CAA 72 bp CATGCTAACAGCGCGGATGCACTTGTGCTCATGCACTaGACGCCCAGCTTGAACTGTTCGCGAGAGAAGCGG +
Preference number: 6 (lower is better)
Translates to: HANSADALVLMH*TPSLNCSREKR
Trigger: CCGCTTCTCTCGCGAACAGTTCAAGCTGGGCGTCAAGTGCATGAGCACAAGTGCATCCGCGCTGTTAGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5
CDS CCA 72 bp AATTCACAGAATTGGAATTCACTGGCGGTAAAGTCCTaGGTGAAGACCTTTCCCTTAAAGCCTGAGATAGCA +
Preference number: 6 (lower is better)
Translates to: NSQNWNSLAVKS*VKTFPLKPEIA
Trigger: TGCTATCTCAGGCTTTAAGGGAAAGGTCTTCACCCAGGACTTTACCGCCAGTGAATTCCAATTCTGTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094216.5