RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TLN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028465

Ensembl transcript IDs: ENSMUST00000030187.14, ENSMUST00000125509.2, ENSMUST00000130353.2, ENSMUST00000134623.2

Found 604 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGCCGTGGGGACTGGCTGGAAGCTGCTGGCAGGCTGGAGCAGCTaGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAAT +
Preference number: 1 (lower is better)
Translates to: VAVGTGWKLLAGWSS*GPGRFKLRYGSINN
Trigger: ATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCTCCAGCCTGCCAGCAGCTTCCAGCCAGTCCCCACGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAGGCTTGCAGTGGGACTaGGCAGGGCCAGGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVGLQWD*AGPGPG
Trigger: CCCTGGGCCTGGCCCTGCCCAGTCCCACTGCAAGCC...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACGTGGCCGTGGGGACTaGCTGGAAGCTGCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVRGRGD*LEAAGR
Trigger: CCTGCCAGCAGCTTCCAGCCAGTCCCCACGGCCACG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGGACACGGCTTGCAGTaGGACTGGGCAGGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: VESPLLESDLFGFTTLKPGHGLQ*DWAGPG
Trigger: GCCTGGCCCTGCCCAGTCCCACTGCAAGCCGTGTCC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR GCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGGAGAGGACACGGCTTaGAGTGGGACTGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: VESPLLESDLFGFTTLKPGEDTA*SGTGQG
Trigger: GCCCTGCCCAGTCCCACTGCAAGCCGTGTCCTCTCC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAGGACTGGCTGGAAGCTaGTGGCAGGCTGGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVGLAGS*WQAGAA
Trigger: AGCTGCTCCAGCCTGCCAGCAGCTTCCAGCCAGTCC...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGTTTGGCAGGCACTTTaGGGGAGTGCTGGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGVWQAL*GSAGVG
Trigger: CCCAACCCCAGCACTCCCCCAAAGTGCCTGCCAAAC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTGGGGTTGGGCAGCTTaGGTCCTGAGCAGCCCAGAA +
Preference number: 2 (lower is better)
Translates to: LRYGSINNTLGALILWRGWGWAA*VLSSPE
Trigger: TTCTGGGCTGCTCAGGACCCAAGCTGCCCAACCCCA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAACTTTGGGGGAGTGCTaGGGTTGGGCAGCTTGGGTC +
Preference number: 2 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVTLGEC*GWAAWV
Trigger: GACCCAAGCTGCCCAACCCCAGCACTCCCCCAAAGT...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGGCAGGCACAGTCTCTaGGCTGGGTCTGCATTAAAT +
Preference number: 2 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTGRHSL*AGSALN
Trigger: ATTTAATGCAGACCCAGCCCAGAGACTGTGCCTGCC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGAGCAGCTGGGGCCCTaGCAGGTTCAAACTGAGGTA +
Preference number: 2 (lower is better)
Translates to: VESPLLESDLFGFTTLKPEQLGP*QVQTEV
Trigger: TACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCTC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR GCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCTTAGGGGCCCTAGGGTaGAAAGGCACTTGGGAGTCA +
Preference number: 2 (lower is better)
Translates to: VESPLLESDLFGFTTLKPLGALG*KGTWES
Trigger: TGACTCCCAAGTGCCTTTGCACCCTAGGGCCCCTAA...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTCTCTGGGCTGGGTCTaGATTAAATACACAGGGCTT +
Preference number: 2 (lower is better)
Translates to: LRYGSINNTLGALILWRGSLGWV*IKYTGL
Trigger: AAGCCCTGTGTATTTAATGCAGACCCAGCCCAGAGA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGCACAGTCTCTGGGCTaGGTCTGCATTAAATACACA +
Preference number: 2 (lower is better)
Translates to: KLRYGSINNTLGALILWRAQSLG*VCIKYT
Trigger: TGTGTATTTAATGCAGACCCAGCCCAGAGACTGTGC...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR CCA 72 bp GCAGGCACTTTGGGGGAGTGCTGGGGTTGGGCAGCTTaGGTCCTGAGCAGCCCAGAAGGCTTTGGTAGTGGC +
Preference number: 3 (lower is better)
Translates to: AGTLGECWGWAA*VLSSPEGFGSG
Trigger: GCCACTACCAAAGCCTTCTGGGCTGCTCAGGACCCAAGCTGCCCAACCCCAGCACTCCCCCAAAGTGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGGCCAGGCCCAGGGTTaGGCAGGCACTTTGGGGGAG +
Preference number: 3 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGGQAQG*AGTLGE
Trigger: CTCCCCCAAAGTGCCTGCCAAACCCTGGGCCTGGCC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGGTTTGGCAGGCACTTaGGGGGAGTGCTGGGGTTGG +
Preference number: 3 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTGLAGT*GECWGW
Trigger: CCAACCCCAGCACTCCCCCAAAGTGCCTGCCAAACC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR CAA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGGGGGAGTGCTGGGGTaGGGCAGCTTGGGTCCTGAG +
Preference number: 3 (lower is better)
Translates to: VESPLLESDLFGFTTLKPGGVLG*GSLGPE
Trigger: CTCAGGACCCAAGCTGCCCAACCCCAGCACTCCCCC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR CAA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCCTGGGGTTGGGCAGCTaGGGTCCTGAGCAGCCCAGA +
Preference number: 3 (lower is better)
Translates to: VESPLLESDLFGFTTLKPLGLGS*GPEQPR
Trigger: TCTGGGCTGCTCAGGACCCAAGCTGCCCAACCCCAG...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR-3UTR CAA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGAGGGTGCAAAGGCACTaGGGAGTCAGGGAGAGGACA +
Preference number: 3 (lower is better)
Translates to: LRYGSINNTLGALILWRGRVQRH*GVRERT
Trigger: TGTCCTCTCCCTGACTCCCAAGTGCCTTTGCACCCT...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
3UTR CAA 72 bp GGGCAGGCACTTAGGGGCCCTAGGGTGCAAAGGCACTaGGGAGTCAGGGAGAGGACACGGCTTGCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: GQALRGPRVQRH*GVRERTRLAVG
Trigger: TCCCACTGCAAGCCGTGTCCTCTCCCTGACTCCCAAGTGCCTTTGCACCCTAGGGCCCCTAAGTGCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTGGGCTCGGTCCTCCTaGCTCGGGGCCTGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGWARSS*LGACPA
Trigger: GGCCGGACAGGCCCCGAGCCAGGAGGACCGAGCCCA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGCCCACGTTCCCGGCTaGCTGCAGCAGGTTCTGACG +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTAHVPG*LQQVLT
Trigger: CGTCAGAACCTGCTGCAGGCAGCCGGGAACGTGGGC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGATGGCTGCACCGAGCTTaGCCACATCAGCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGWLHRA*PHQRGG
Trigger: CCCGCCTCGCTGATGTGGTCAAGCTCGGTGCAGCCA...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGCCCACCTTTCCTTaGGCCACCAGCTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGAPTFP*ATSSLW
Trigger: CCAGAGGGAGCTGGTGGCTCAAGGAAAGGTGGGCGC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCCCTGCAAGGCCCTTTaGTGCTTGCAGAAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTPCKAL*CLQKGP
Trigger: CGGCCCCTTCTGCAAGCAGCAAAGGGCCTTGCAGGG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTACGGCCTTACAGCTCTaGACCAGTAGGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTTALQL*TSRGWG
Trigger: CCCCCAGCCCCTACTGGTGCAGAGCTGTAAGGCCGT...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTTGCTGCCTGTGCGGCTaGCTCCGTGAAGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTCCLCG*LREATE
Trigger: CTCTGTGGCTTCACGGAGGCAGCCGCACAGGCAGCA...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTCCAGCTTCTTGGCTaGAGCCTCGATGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTLQLLG*SLDGGC
Trigger: GCAGCCGCCATCGAGGCTGCAGCCAAGAAGCTGGAG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTAGCCCTCCACAGCTTTaGCCACCAGTCGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTSPPQL*PPVAQP
Trigger: AGGCTGGGCGACTGGTGGCCAAAGCTGTGGAGGGCT...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGCCAGGATGCGGGCCTaGCGCACCATCTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGARMRA*RTISPA
Trigger: TGCTGGGGAGATGGTGCGCCAGGCCCGCATCCTGGC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGATGGCTGCAGCCTCGATaGCGGCTGCGGCTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGWLQPR*RLRLPR
Trigger: TCTTGGGAGCCGCAGCCGCCATCGAGGCTGCAGCCA...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAAGGCTCCAGAGCGCATaGTGGCTGGCAGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGRLQSA*WLAEPQ
Trigger: CTGTGGCTCTGCCAGCCATCATGCGCTCTGGAGCCT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGAGCGCCTGCTGGGCTaGAGTCAGAGGTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGERLLG*SQRWHV
Trigger: CACATGCCACCTCTGACTTCAGCCCAGCAGGCGCTC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGCCCGAGCCAGGTCCTaGGGAGTTCCTCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPARARS*GVPREA
Trigger: AGCCTCCCGAGGAACTCCTCAGGACCTGGCTCGGGC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGAGGACCAGGGCGGCTaGAGCACTTGCCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGEDQGG*STCHCL
Trigger: AAGGCAGTGGCAAGTGCTGCAGCCGCCCTGGTCCTC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGGTGACAGCCGTGGCTaGTGCTCCTACCCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGGDSRG*CSYPSK
Trigger: CTTCGAGGGGTAGGAGCAGCAGCCACGGCTGTCACC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGCGTGGGCCTTCACGTaGTGCAGCAGCTCATTGAGG +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTAWAFT*CSSSLR
Trigger: CCTCAATGAGCTGCTGCAGCACGTGAAGGCCCACGC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGCCTTCTGAGCAGCAGTaGGCAGCTCGGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGPSEQQ*AARPGQ
Trigger: CTGCCCTGGCCGAGCTGCGCACTGCTGCTCAGAAGG...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGCCGCCAACGACTCCTaGAGCACTGGCTGCTTCGTT +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTAANDS*STGCFV
Trigger: AACGAAGCAGCCAGTGCTGCAGGAGTCGTTGGCGGC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGCGGAAATGAGGCCCTaGGACCACTGCCCATCATCC +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTAEMRP*DHCPSS
Trigger: GGATGATGGGCAGTGGTCGCAGGGCCTCATTTCCGC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAAGGTCTGAGGTGGCTTaGGCCAGGATGCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVRSEVA*ARMRAW
Trigger: CCAGGCCCGCATCCTGGCCCAAGCCACCTCAGACCT...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGCAGCTGCATTGGTaGCCATGCGAAGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGAQLHW*PCEAPQ
Trigger: CTGAGGGGCTTCGCATGGCCACCAATGCAGCTGCGC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGATAACACCTGGGCCTaGGTACAGCCAGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGDNTWA*VQPGSP
Trigger: GGGGGAGCCTGGCTGTACCCAGGCCCAGGTGTTATC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGACGGGGAGCAAGCTGCTaGCTGACAGCGGCAAGCGAA +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGRGASC*LTAASE
Trigger: TTCGCTTGCCGCTGTCAGCCAGCAGCTTGCTCCCCG...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTACCTTGTGTCCCAGCTaGGAGGCTTCAGCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTTLCPS*EASARA
Trigger: TGCTCGGGCTGAAGCCTCCCAGCTGGGACACAAGGT...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAGCAATGAGGGCGAGCTaGGCACTAGGGCTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVAMRAS*ALGLSG
Trigger: GCCTGACAGCCCTAGTGCTCAGCTCGCCCTCATTGC...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACCCGAGCTGTCTGGATaGGCCCTCCAGCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVPELSG*ALQHSP
Trigger: TGGAGAGTGCTGGAGGGCTCATCCAGACAGCTCGGG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAGAGCAAGCTGCTGGCTaGCAGCGGCAAGCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVEQAAG*QRQAKP
Trigger: AGGCTTCGCTTGCCGCTGTCAGCCAGCAGCTTGCTC...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAAGAGCCACAGAGCCGTaGTCCACTTTCCCCACTCGG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGRATEP*STFPTR
Trigger: CCGAGTGGGGAAAGTGGAGCACGGCTCTGTGGCTCT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGACCACTGGTGATCTGCTaGTGGGCAGGTGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGPLVIC*WAGGML
Trigger: GAGCATGCCACCTGCCCAGCAGCAGATCACCAGTGG...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGTTCCAGTGAGCGCCTaGTGGGCTGAAGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTVPVSA*WAEVRG
Trigger: ACCTCTGACTTCAGCCCAGCAGGCGCTCACTGGAAC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTTTCCGACACAGCCCCTaGAAGGCCCTTTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTFRHSP*KALCCL
Trigger: CAAGCAGCAAAGGGCCTTGCAGGGGCTGTGTCGGAA...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGATGGGCCTTCACGTGCTaGAGCAGCTCATTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGWAFTC*SSSLRA
Trigger: GGCCCTCAATGAGCTGCTGCAGCACGTGAAGGCCCA...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGCGAAGCCCCTCAGCTaGTTCACGCAGTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGAKPLS*FTQSLL
Trigger: CAGCAGCGACTGCGTGAAGCAGCTGAGGGGCTTCGC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAGTTCCTCGGGAGGCTTaGACCAGTTCTGTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVVPREA*TSSVAA
Trigger: GGCCGCCACAGAACTGGTGCAAGCCTCCCGAGGAAC...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAAGACGCAGCACCCACTaGAGCCAGGGTGAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGRRSTH*SQGEWF
Trigger: GAACCACTCACCCTGGCTGCAGTGGGTGCTGCGTCT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTTCACTGGGGCTACACTaGAAGGCACCTGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTSLGLH*KAPALV
Trigger: CACCAAGGCAGGTGCCTTGCAGTGTAGCCCCAGTGA...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAGGACTGGGCGGCTTGTaGCAACTTCTCCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVGLGGL*QLLLAP
Trigger: GGGAGCCAGGAGAAGTTGGCACAAGCCGCCCAGTCC...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCGCAGCCTTTACCAGTaGACTGGTGGCTGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTRSLYQ*TGGCSD
Trigger: ATCGCTGCAGCCACCAGTGCACTGGTAAAGGCTGCG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCCAGCCAGGGCCTCTaGGATCCGCTCACGAATCAT +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGASQGL*DPLTNH
Trigger: ATGATTCGTGAGCGGATCCCAGAGGCCCTGGCTGGC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACTGGTGATCTGCTGCTaGGCAGGTGGCATGCTCCCC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVLVICC*AGGMLP
Trigger: GGGGAGCATGCCACCTGCCCAGCAGCAGATCACCAG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAAGGCTGCAGCTTGCTTaGCTGCATGCTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGRLQLA*LHAPGA
Trigger: AGCGCCTGGAGCATGCAGCCAAGCAAGCTGCAGCCT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTTTGTCACACTCCTTCTaGCCAGGTGCCTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTLSHSF*PGACWV
Trigger: CACCCAGCAGGCACCTGGCCAGAAGGAGTGTGACAA...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCTGCAGATAACACCTaGGCCTGGGTACAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGAADNT*AWVQPG
Trigger: GCCTGGCTGTACCCAGGCCCAGGTGTTATCTGCAGC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGTGGCTGCTCGGCACTaGGCACGGTTCTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGVAARH*ARFSSV
Trigger: CACAGAAGAGAACCGTGCCCAGTGCCGAGCAGCCAC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTTCCTCCAGGGCTTCCTaGGTGTGTGCTGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTSSRAS*VCAACL
Trigger: CAAGCAAGCAGCACACACCCAGGAAGCCCTGGAGGA...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAGTGGCCACGGAGGACTaGGCGGCTTGTGCCAACTTC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVVATED*AACANF
Trigger: GAAGTTGGCACAAGCCGCCCAGTCCTCCGTGGCCAC...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCACACAGATTGTTGGTaGCCGCAGCCACCATACGGG +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTHTDCW*PQPPYG
Trigger: CCCGTATGGTGGCTGCGGCCACCAACAATCTGTGTG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGCTGCACTGCAGGATCTaGTGTCAGCGCAGCCACACC +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGLHCRI*CQRSHT
Trigger: GGTGTGGCTGCGCTGACATCAGATCCTGCAGTGCAG...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCGGCTCTGTGCTTCTTaGAATGTCCCCGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTRLCAS*NVPVLG
Trigger: TCCAAGCACGGGGACATTTCAAGAAGCACAGAGCCG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGACAGCCAGCTGACTCTTaGGGTTGGGAGAAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGQPADS*GWEKQG
Trigger: ACCCTGCTTCTCCCAACCTCAAGAGTCAGCTGGCTG...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGCAGCCGCAGCCAGCTaGCTCTTGAGGTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGAAAAS*LLRLGE
Trigger: TTCTCCCAACCTCAAGAGTCAGCTGGCTGCGGCTGC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGACTTCAGCAGCCTGGATaGGCTCAGTCACAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGLQQPG*AQSQSQ
Trigger: CTGGCTCTGTGACTGAGCTCATCCAGGCTGCTGAAG...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCCTCCCTCTGGGCTGCTaGCGCAGCCTTTACCAGTGC +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPLPLGC*RSLYQC
Trigger: GCACTGGTAAAGGCTGCGTCAGCAGCCCAGAGGGAG...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGGCATGTGTCCTCGGTaGATCTGGCCACTGGTGATC +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGGMCPR*IWPLVI
Trigger: GATCACCAGTGGCCAGATGCACCGAGGACACATGCC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAAGGCCCTTTGCTGCTTaGAGAAGGGGCCGGCCATTG +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVRPFAA*RRGRPL
Trigger: CAATGGCCGGCCCCTTCTGCAAGCAGCAAAGGGCCT...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTTCTTCTGTAGCTGCTTaGGAGGCAGACACACAGCCC +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTSSVAA*EADTQP
Trigger: GGGCTGTGTGTCTGCCTCGCAAGCAGCTACAGAAGA...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGACAGCCGTGGCTGCTaGTCCTACCCCTCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPDSRGC*SYPSKQ
Trigger: CTGCTTCGAGGGGTAGGAGCAGCAGCCACGGCTGTC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGATCACGCAGTCGCTGCTaGTGTTCCTCACTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGSRSRC*CSSLSG
Trigger: CCCTGACAGTGAGGAACAGCAGCAGCGACTGCGTGA...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGGCGTTCTGCGCAGCTaGATTGGTGGCCATGCGAAG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGGVLRS*IGGHAK
Trigger: CTTCGCATGGCCACCAATGCAGCTGCGCAGAACGCC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGCCCTGGGCTTCAGCTaGTCCAGCTTCTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGALGFS*SSFLAA
Trigger: TGCAGCCAAGAAGCTGGAGCAGCTGAAGCCCAGGGC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGCAGTGCACTGGTGGCTaGAGCGATGGACTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGQCTGG*SDGLGS
Trigger: GCTGCCAAGTCCATCGCTGCAGCCACCAGTGCACTG...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGACTGCCCATCATCCAGTaGATTGGCTGGAATGGCGCC +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGLPIIQ*IGWNGA
Trigger: GGCGCCATTCCAGCCAATGCACTGGATGATGGGCAG...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTCAGTGTCCGCCCATaGTCCAGCCAGTTCAACTCA +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTLSVRP*SSQFNS
Trigger: TGAGTTGAACTGGCTGGACCATGGGCGGACACTGAG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAAGAGCGCATGATGGCTaGCAGAGCCACAGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVRAHDG*QSHRAV
Trigger: CACGGCTCTGTGGCTCTGCCAGCCATCATGCGCTCT...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGGCATGCTCCCCACCTaGAAATTCTCAGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTGMLPT*KFSGPE
Trigger: CTCTGGTCCTGAGAATTTCCAGGTGGGGAGCATGCC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGAGCTCATTGAGGGCCTaGGTGACAGCCGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGSSLRA*VTAVAA
Trigger: AGCAGCCACGGCTGTCACCCAGGCCCTCAATGAGCT...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGACCACCATCTTGGCGGTaGCATCAGCGAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGPPSWR*HQRGSW
Trigger: CCAAGATCCTCGCTGATGCCACCGCCAAGATGGTGG...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCCCGCCTCCACCATCTTaGCGGTGGCATCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPPPPPS*RWHQRG
Trigger: TCCTCGCTGATGCCACCGCCAAGATGGTGGAGGCGG...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCAGCGGTTCAGGGCTTaGGTCACTGCTTTAGCTACC +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTQRFRA*VTALAT
Trigger: GGTAGCTAAAGCAGTGACCCAAGCCCTGAACCGCTG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGTACAAACTGGCGCTTaGCAGTGGGATTGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTVQTGA*QWDWQS
Trigger: GGACTGCCAATCCCACTGCCAAGCGCCAGTTTGTAC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGCCAGCAGAGGGGCTGTaGCTGCTCGGCACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRPAEGL*LLGTGH
Trigger: GTGCCCAGTGCCGAGCAGCCACAGCCCCTCTGCTGG...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGATTACAATGGGCTCCATaGCTGCTCTGCCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGLQWAP*LLCPQG
Trigger: GCCCTGAGGGCAGAGCAGCCATGGAGCCCATTGTAA...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCTGTAATGCAGGCCTaGGTACCACGATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGAVMQA*VPRFPA
Trigger: GGCTGGGAATCGTGGTACCCAGGCCTGCATTACAGC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGGCGCCACTTCTGGGTaGAAAGCTGCTTCCTTGCAA +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTGATSG*KAASLQ
Trigger: TTGCAAGGAAGCAGCTTTCCACCCAGAAGTGGCGCC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGCTGCTCCAGCTTCTTaGCTGCAGCCTCGATGGCGG +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPAAPAS*LQPRWR
Trigger: CCGCCATCGAGGCTGCAGCCAAGAAGCTGGAGCAGC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCCTTTACCAGTGCACTaGTGGCTGCAGCGATGGACT +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTPLPVH*WLQRWT
Trigger: AGTCCATCGCTGCAGCCACCAGTGCACTGGTAAAGG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGCCACACTCTTGGCCTTaGGGACCAGGGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRPHSWP*GPGRLQ
Trigger: CTGCAGCCGCCCTGGTCCTCAAGGCCAAGAGTGTGG...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGGCCACCTCCTTGGCTaGCTGTACAAACTGGCGCTT +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGGHLLG*LYKLAL
Trigger: AAGCGCCAGTTTGTACAGTCAGCCAAGGAGGTGGCC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGCCACTGCAGCCAGGGTaGGTGGTTCAAAGTACTGGG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGPLQPG*VVQSTG
Trigger: CCCAGTACTTTGAACCACTCACCCTGGCTGCAGTGG...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCTGCAGGCTTGGCTTGTaGGGCCAGTCGGCCATAGTC +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPCRLGL*GQSAIV
Trigger: GACTATGGCCGACTGGCCTCACAAGCCAAGCCTGCA...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTTGCGGGCACACTCTATaGGCTCCTTCTTGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTCGHTL*APSWCR
Trigger: TCTACACCAAGAAGGAGCTCATAGAGTGTGCCCGCA...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACCTTGGCAGAGTTCTTaGGCTGCCACACTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVPWQSS*AATLQG
Trigger: ACCCTGCAGTGTGGCAGCTCAAGAACTCTGCCAAGG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGATTGGCTGTGGCAATaGCATCTTCCTGTCGACAGG +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTDWLWQ*HLPVDR
Trigger: CCTGTCGACAGGAAGATGTCATTGCCACAGCCAATC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACAAGCTACCAGGAGCTaGGCTGTGGAGGCAGCTACT +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVQATRS*AVEAAT
Trigger: AGTAGCTGCCTCCACAGCTCAGCTCCTGGTAGCTTG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTATCCGCTCACGAATCATaGGGCAGGCGTCGTACACCA +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVSAHES*GRRRTP
Trigger: TGGTGTACGACGCCTGCCGCATGATTCGTGAGCGGA...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTATGAGCTGTGCGATCTaGTCGCCTTCTGTCGTCTGT +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTMSCAI*SPSVVC
Trigger: ACAGACGACAGAAGGCGAGCAGATCGCACAGCTCAT...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGCTGGGCAGGTGGCATaGTCCCCACCTGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGAGQVA*SPPGNS
Trigger: AGAATTTCCAGGTGGGGAGCATGCCACCTGCCCAGC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACTGCATTGGTGGCCATaGGAAGCCCCTCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVLHWWP*EAPQLL
Trigger: AAGCAGCTGAGGGGCTTCGCATGGCCACCAATGCAG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGCATGCTCCAGGCGCTaGACCAACTTCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTACSRR*TNFFLM
Trigger: CATCAAGAAGAAGTTGGTGCAGCGCCTGGAGCATGC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGCAGAGGCTGCAGCTTaGTTGGCTGCATGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPAEAAA*LAACSR
Trigger: CCTGGAGCATGCAGCCAAGCAAGCTGCAGCCTCTGC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACTTCCTCGGACACCCTaGACCAGCAACGGAATCTGC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVLPRTP*TSNGIC
Trigger: GCAGATTCCGTTGCTGGTGCAGGGTGTCCGAGGAAG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACACTCAGGAGTCGCTTaGTGGCATCTCCAACGGCTC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVHSGVA*WHLQRL
Trigger: GAGCCGTTGGAGATGCCAGCAAGCGACTCCTGAGTG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTTCTGGCCAGGTGCCTaGTGGGTGCACATGGTGATG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGFWPGA*WVHMVM
Trigger: CATCACCATGTGCACCCAGCAGGCACCTGGCCAGAA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGAATGGGCTCCATGGCTaGTCTGCCCTCAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGNGLHG*SALRAD
Trigger: ATCAGCCCTGAGGGCAGAGCAGCCATGGAGCCCATT...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGTCTCACACTCCAGCTaGCCTGGGGCTTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPVSHSS*PGALSL
Trigger: GAGGGACAAAGCCCCAGGGCAGCTGGAGTGTGAGAC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTATGGGTGTGTGCTGCTTaGTTGGGGTTACCACCAGCC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVWVCAA*LGLPPA
Trigger: GGCTGGTGGTAACCCCAAGCAAGCAGCACACACCCA...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGGCTTCCTGGGTGTGTaGTGCTTGCTTGGGGTTACC +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGGFLGV*CLLGVT
Trigger: GGTAACCCCAAGCAAGCAGCACACACCCAGGAAGCC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAACACTGCAAGGCACCTaGCTTGGTGACCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGTLQGT*LGDQSR
Trigger: TCTGCTCTGGTCACCAAGGCAGGTGCCTTGCAGTGT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACCCAACTTTGCCCGCTaGAGCCTTCGTAGCGCTGAT +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVPNFAR*SLRSAD
Trigger: ATCAGCGCTACGAAGGCTGCAGCGGGCAAAGTTGGG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGAGCTGCCACACTaGAGGGTCATCCCCAACTTT +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTLELPH*RVIPNF
Trigger: AAAGTTGGGGATGACCCTGCAGTGTGGCAGCTCAAG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGCCTCTAGGGCCCGTGTaGCTTTGGTGGCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGPLGPV*LWWPHL
Trigger: AAGATGAGGCCACCAAAGGCACACGGGCCCTAGAGG...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGGAAAGCTGCTTCCTTaGAAGCCCGAAGCATGTCCG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGGKLLP*KPEACP
Trigger: CGGACATGCTTCGGGCTTGCAAGGAAGCAGCTTTCC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTGTCCTCGGTGCATCTaGCCACTGGTGATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGCPRCI*PLVICC
Trigger: GCAGCAGATCACCAGTGGCCAGATGCACCGAGGACA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTTGGAGGCAGCATCCTaGCCAAGAGGGGGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGLEAAS*PRGGRV
Trigger: GACTCTACCCCCTCTTGGCCAGGATGCTGCCTCCAA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGTCCTCACTGTCAGGGTaGGCGGCTGCTCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRSSLSG*AAAPLA
Trigger: GGCCAAGGGAGCAGCCGCCCACCCTGACAGTGAGGA...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCTCTGCGCAGCTGCATTaGTGGCCATGCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPSAQLH*WPCEAP
Trigger: AGGGGCTTCGCATGGCCACCAATGCAGCTGCGCAGA...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAGGGAGATGCCAGTCATaGCCTCACCTAGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVGRCQS*PHLGPW
Trigger: CCAAGGTCCTAGGTGAGGCCATGACTGGCATCTCCC...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGACCTTGCTGTCCAGCTTaGCTGTTGGGGTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGPCCPA*LLGSET
Trigger: TGTCTCTGACCCCAACAGCCAAGCTGGACAGCAAGG...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAACACTCCAGCTGCCCTaGGGCTTTGTCCCTCATGCT +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVTLQLP*GFVPHA
Trigger: AGCATGAGGGACAAAGCCCCAGGGCAGCTGGAGTGT...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTAAGTGCCATCTGCTGTaGGTGGCTCAGGGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTKCHLL*VAQGLR
Trigger: TCTAAGACCCTGAGCCACCCACAGCAGATGGCACTT...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGGGCCCGTGTGCCTTTaGTGGCCTCATCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPGPVCL*WPHLPQ
Trigger: CTGTGGAAGATGAGGCCACCAAAGGCACACGGGCCC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGACGTATGTGCTCTGTaGTTGCCTCTAGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGDVCAL*LPLGPV
Trigger: CACGGGCCCTAGAGGCAACCACAGAGCACATACGTC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCCTTGGCAGGTGGCTCTaGGGAACAGAAGACCGCCAG +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPLGRWL*GTEDRQ
Trigger: CTGGCGGTCTTCTGTTCCCCAGAGCCACCTGCCAAG...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTATCAGGCGCCACTTCTaGGTGGAAAGCTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTIRRHF*VESCFL
Trigger: AAGGAAGCAGCTTTCCACCCAGAAGTGGCGCCTGAT...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGACATCATCCAGTGCATTaGCTGGAATGGCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGHHPVH*LEWRPP
Trigger: AGGTGGGCGCCATTCCAGCCAATGCACTGGATGATG...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGATTCTCCTGGCTAGCATaGCCCTGGACAGCTGCGTTA +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGFSWLA*PWTAAL
Trigger: TAACGCAGCTGTCCAGGGCCATGCTAGCCAGGAGAA...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCTGCTGCTGCCGGATCTaGGCGAGCTTTTTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPCCCRI*ASFFRA
Trigger: GGCTCGGAAAAAGCTCGCCCAGATCCGGCAGCAGCA...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGTGAGGCTCCATTCCTaGATCACCTCCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGVRLHS*ITSLVF
Trigger: GAAGACCAAGGAGGTGATTCAGGAATGGAGCCTCAC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCTGGAAGAGATGGTGGTaGCTGCACAGCCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPWKRWW*LHSPLL
Trigger: CAGCAGTGGGCTGTGCAGTCACCACCATCTCTTCCA...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAGCACCAACTTCTTCTTaGTGGCGTTCTGCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVAPTSS*WRSAQL
Trigger: CAGCTGCGCAGAACGCCATCAAGAAGAAGTTGGTGC...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTAGTAGGACATGTCGTTaGTGGGCTGGACTGGATTCT +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTSRTCR*WAGLDS
Trigger: AGAATCCAGTCCAGCCCATCAACGACATGTCCTACT...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACCATCTCCTGAACAGTaGCAGCAATGGCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVPSPEQ*QQWPWL
Trigger: CAGCCAAGGCCATTGCTGTCACTGTTCAGGAGATGG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAAAGACCGCCAGTTCCTaGCGTATGTGCTCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGKTASS*RMCSVV
Trigger: AACCACAGAGCACATACGTCAGGAACTGGCGGTCTT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGACTGGCACTGGAAGCCTaGAAATTCACAGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGLALEA*KFTGLV
Trigger: GACAAGGCCTGTGAATTTGCAGGCTTCCAGTGCCAG...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGCCAGCAATGAGCTGTaGGATCTGCTCGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGASNEL*DLLAFC
Trigger: ACAGAAGGCGAGCAGATCGCACAGCTCATTGCTGGC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTAGAGATGGTGGTGACTaGACAGCCCACTGCTGTATA +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTRDGGD*TAHCCI
Trigger: TATACAGCAGTGGGCTGTGCAGTCACCACCATCTCT...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACTTTCCCCAATTTGCTaGAACAGCTCCCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVLSPIC*NSSPLA
Trigger: GGCCAGTGGGGAGCTGTTGCAGCAAATTGGGGAAAG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTTCCATCTTCTGTAGCTaGTTGCGAGGCAGACACACA +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTSIFCS*LRGRHT
Trigger: TGTGTGTCTGCCTCGCAAGCAGCTACAGAAGATGGA...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTATTCTTGATGGCGTTCTaGGCAGCTGCATTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVFLMAF*AAALVA
Trigger: GGCCACCAATGCAGCTGCGCAGAACGCCATCAAGAA...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTAGCAATGGTCTGTGTTaGAGAGGCTGCAGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTSNGLC*RGCSLL
Trigger: AAGCAAGCTGCAGCCTCTGCAACACAGACCATTGCT...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGGTTCCACCAGTCCTTaGTGTCCAGCTTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGGSTSP*CPAWLL
Trigger: CAACAGCCAAGCTGGACAGCAAGGACTGGTGGAACC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGTCACGGGGAGCAAGCTaGTGGCTGACAGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRSRGAS*WLTAAS
Trigger: GCTTGCCGCTGTCAGCCAGCAGCTTGCTCCCCGTGA...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGCTCCCAGCTGCATTCTaGACTAGGACCTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGLPAAF*TRTLVS
Trigger: GGACACCAAGGTCCTAGTGCAGAATGCAGCTGGGAG...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAGCAGAGTTCTTGAGCTaGCACACTGCAGGGTCATCC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVAEFLS*HTAGSS
Trigger: GGATGACCCTGCAGTGTGGCAGCTCAAGAACTCTGC...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCAGCCTCGATGGCGGCTaGGGCTCCCAAGAGTTCATT +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPSLDGG*GSQEFI
Trigger: AATGAACTCTTGGGAGCCGCAGCCGCCATCGAGGCT...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCAGGCCCTGCGACCACTaGCCATCATCCAGTGCATTG +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPRPCDH*PSSSAL
Trigger: CAATGCACTGGATGATGGGCAGTGGTCGCAGGGCCT...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAAACTTGTACTGCTGCTaGCGGATCTGGGCGAGCTTT +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGNLYCC*RIWASF
Trigger: AAAGCTCGCCCAGATCCGGCAGCAGCAGTACAAGTT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGAAGAACTTGTACTGCTaGTGCCGGATCTGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGKNLYC*CRIWAS
Trigger: GCTCGCCCAGATCCGGCAGCAGCAGTACAAGTTCTT...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGGCAAGAACTTGTACTaGTGCTGCCGGATCTGGGCG +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPGKNLY*CCRIWA
Trigger: CGCCCAGATCCGGCAGCAGCAGTACAAGTTCTTGCC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCCACCATCTTCCCACCTaGCTGCAGGAAGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPHHLPT*LQEALA
Trigger: AGCCAGAGCTTCCTGCAGCCAGGTGGGAAGATGGTG...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCAGAGCTCACCGCTTTaGTGCTGTTGCCAAGATCTT +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTQSSPL*CCCQDL
Trigger: AAGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGAGGTTGGACACCACCTaGGCTCGGTCCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRRLDTT*ARSSWL
Trigger: GAGCCAGGAGGACCGAGCCCAGGTGGTGTCCAACCT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAATATGCCCTTCAGGTTaGACACCACCTGGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVICPSG*TPPGLG
Trigger: ACCGAGCCCAGGTGGTGTCCAACCTGAAGGGCATAT...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCACATGGTGATGAGCTaGTTGATGCTGTCCGTCACT +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTHMVMS*LMLSVT
Trigger: AGTGACGGACAGCATCAACCAGCTCATCACCATGTG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGAGCCACAGAGAGCCTTaGAGGCTGTGGCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGSHREP*RLWQWH
Trigger: ATGCCATTGCCACAGCCTCCAAGGCTCTCTGTGGCT...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGCCATCTGCTGTGGGTaGCTCAGGGTCTTAGACGCA +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPAICCG*LRVLDA
Trigger: TGCGTCTAAGACCCTGAGCCACCCACAGCAGATGGC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTATGTGTGCTGCTTGCTTaGGGTTACCACCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVCVLLA*GYHQPP
Trigger: AGGAGGCTGGTGGTAACCCCAAGCAAGCAGCACACA...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGTCGGCCATAGTCACTaGTCAGCTGGTTGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGVGHSH*SAGWQE
Trigger: CTCTTGCCAACCAGCTGACCAGTGACTATGGCCGAC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTATGTGCCAACTTCTCCTaGCTCCCAGCTGCATTCTGC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVCANFS*LPAAFC
Trigger: GCAGAATGCAGCTGGGAGCCAGGAGAAGTTGGCACA...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAATGGCTTCAGCAGCCTaGATGAGCTCAGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGMASAA*MSSVTE
Trigger: CTCTGTGACTGAGCTCATCCAGGCTGCTGAAGCCAT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTTACCAGTGCACTGGTaGCTGCAGCGATGGACTTGG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGLPVHW*LQRWTW
Trigger: CCAAGTCCATCGCTGCAGCCACCAGTGCACTGGTAA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAGCATTGCCAGCAGCCTaGAGCCGTTTCATTGCCTCA +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVALPAA*SRFIAS
Trigger: TGAGGCAATGAAACGGCTCCAGGCTGCTGGCAATGC...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCAGCTCTCGAACCAGTaGATACTCATCATGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTQLSNQ*ILIMVG
Trigger: ACCAACCATGATGAGTATTCACTGGTTCGAGAGCTG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCAGACACCGTAAGTCTTaGGGGAACGGGCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPRHRKS*GNGPAS
Trigger: TGAAGCTGGCCCGTTCCCTCAAGACTTACGGTGTCT...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGATTCTTGGCACACAGGTaGGCTGATTGTAGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGFLAHR*ADCRCY
Trigger: GTAGCACCTACAATCAGCTCACCTGTGTGCCAAGAA...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCAGTTCTGTGGCGGCCTaGTTTAACCCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPSSVAA*FNPAAA
Trigger: AGCTGCAGCTGGGTTAAATCAGGCCGCCACAGAACT...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGCCTTGGAGTTCTCCATaGCACTGTCCAAGCAACCGA +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGPWSSP*HCPSNR
Trigger: TCGGTTGCTTGGACAGTGTCATGGAGAACTCCAAGG...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGATTCAGGGCTGGTGTTTaGCTTGGTTACCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGFRAGV*LGYHLL
Trigger: CAGGAGATGGTAACCAAGTCAAACACCAGCCCTGAA...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGTGGCCACTGGTGATCTaGTGCTGGGCAGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRWPLVI*CWAGGM
Trigger: CATGCCACCTGCCCAGCAGCAGATCACCAGTGGCCA...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGCAGCCTGCACAGCCTaGATGCTGGAGTTAATGGTT +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGAACTA*MLELMV
Trigger: AACCATTAACTCCAGCATGCAGGCTGTGCAGGCTGC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGACTGCACAGCCCACTaGTGTATAGTCTGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGDCTAH*CIVCLC
Trigger: GCAGAGACAGACTATACAGCAGTGGGCTGTGCAGTC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGACCGCTTTGGTGCTGTTaGCAAGATCTTGGGTACACT +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGPLWCC*QDLGYT
Trigger: AGTGTACCCAAGATCTTGGCAACAGCACCAAAGCGG...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGACCGAGCTGCAATACCTaGATAGTTCTCATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGPSCNT*IVLIAL
Trigger: CAGGGCAATGAGAACTATGCAGGTATTGCAGCTCGG...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGCTTGAAATGTCCCCGTaGTTGGAGGAAGCGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGLEMSP*LEEASH
Trigger: GTGACTCGCTTCCTCCAAGCACGGGGACATTTCAAG...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGCTGAATTGCCTGGTTTaGACGGGCAAACTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGLNCLV*TGKLCG
Trigger: CCCACACAGTTTGCCCGTGCAAACCAGGCAATTCAG...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAACAGGCCATCTGAATTaGCTGGTTTGCACGGGCAAA +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGTGHLN*LVCTGK
Trigger: TTTGCCCGTGCAAACCAGGCAATTCAGATGGCCTGT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTATTCTGGGTGGAAAGCTaGTTCCTTGCAAGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVFWVES*FLASPK
Trigger: CTTCGGGCTTGCAAGGAAGCAGCTTTCCACCCAGAA...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGGACTGTTGACTTTTTaGGTGACACTGAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTGLLTF*VTLSPP
Trigger: TGGAGGACTCAGTGTCACCCAAAAAGTCAACAGTCC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGTACAGGCCACCAGCTaGGAAGTGGACAGAGCACAT +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPVQATS*EVDRAH
Trigger: ATGTGCTCTGTCCACTTCCCAGCTGGTGGCCTGTAC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGCAGAGGCTGCATGTTaGGCTGCAGCAATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPAEAAC*AAAMVC
Trigger: ACAGACCATTGCTGCAGCCCAACATGCAGCCTCTGC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACTGTGTCAAGCACAATaGCCTGCACTGCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVLCQAQ*PALQDL
Trigger: CAGATCCTGCAGTGCAGGCCATTGTGCTTGACACAG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTTATCCACGTCTCTTTaGCCAGGCAGGCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGLSTSL*PGRQLT
Trigger: TGTCAGCTGCCTGCCTGGCCAAAGAGACGTGGATAA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCTCAGGAGTCGCTTGCTaGCATCTCCAACGGCTCGTA +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPSGVAC*HLQRLV
Trigger: TACGAGCCGTTGGAGATGCCAGCAAGCGACTCCTGA...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGTTGATGGGCTGGACTaGATTCTCCAGGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGVDGLD*ILQEFS
Trigger: CGAGAACTCCTGGAGAATCCAGTCCAGCCCATCAAC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCTGGAGGCTGTGGCAATaGCATCTCCAAACTCCGGCA +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPWRLWQ*HLQTPA
Trigger: TGCCGGAGTTTGGAGATGCCATTGCCACAGCCTCCA...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGAGCCTTGGAGGCTGTaGCAATGGCATCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGEPWRL*QWHLQT
Trigger: AGTTTGGAGATGCCATTGCCACAGCCTCCAAGGCTC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGCTGACTGTACAAACTaGCGCTTGGCAGTGGGATTG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGADCTN*RLAVGL
Trigger: CAATCCCACTGCCAAGCGCCAGTTTGTACAGTCAGC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCCACTGGTCAGCTGGTTaGCAAGAGGGCCTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPHWSAG*QEGLAL
Trigger: AAGAGCTAGGCCCTCTTGCCAACCAGCTGACCAGTG...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGAGAGCAGAGCAGCCATaGCCCAGCTCCTGTACTCGG +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRRAEQP*PSSCTR
Trigger: CCGAGTACAGGAGCTGGGCCATGGCTGCTCTGCTCT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGCCTTGGGTTTGGCCCTaGGCTTCAGCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRPWVWP*ASAAPA
Trigger: AGCTGGAGCAGCTGAAGCCCAGGGCCAAACCCAAGG...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGTGCATTGGCTGGAATaGCGCCCACCTTTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPVHWLE*RPPFLE
Trigger: CTCAAGGAAAGGTGGGCGCCATTCCAGCCAATGCAC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGCTTCACACAGATTGTTaGTGGCCGCAGCCACCATAC +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGLHTDC*WPQPPY
Trigger: GTATGGTGGCTGCGGCCACCAACAATCTGTGTGAAG...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCCTTCATCTTTTCCTTaGCTAGGAAGAAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTPSSFP*LGRRRH
Trigger: GTGTCTCCTTCTTCCTAGTCAAGGAAAAGATGAAGG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGAGGCAGTGCCAGCTGTaGTGGCATCTACCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRRQCQL*WHLPGS
Trigger: ACTCCCAGGTAGATGCCATCACAGCTGGCACTGCCT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTTTTTGCCTCTTCAATaGGGCTGCTGGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGFLPLQ*GCWPCP
Trigger: TGGACAAGGCCAGCAGCCTCATTGAAGAGGCAAAAA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTATTTCTTGATGGAATCTaGGACAGTCCGAGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVFLDGI*DSPRVA
Trigger: GGCCACTCTCGGACTGTCTCAGATTCCATCAAGAAA...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCAGCTGGTTGATGGCCTaGGTGATAGAGTCCACCATG +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPSWLMA*VIESTM
Trigger: CATGGTGGACTCTATCACTCAGGCCATCAACCAGCT...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGCTCGTCTCGAAGCTCTaGAGGCAAGAACTTGTACTG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGLVSKL*RQELVL
Trigger: CAGTACAAGTTCTTGCCTTCAGAGCTTCGAGACGAG...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTCACTTTCCCCAATTTaGTGCAACAGCTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGSLSPI*CNSSPL
Trigger: CAGTGGGGAGCTGTTGCAGCAAATTGGGGAAAGTGA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGATCTTCCCACCTGGCTaGAGGAAGCTCTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRIFPPG*RKLWLA
Trigger: TGCCAGCCAGAGCTTCCTGCAGCCAGGTGGGAAGAT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGTCCTGCAGCACTGGCTaGTTCGTTGAGGGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRSCSTG*FVEGRR
Trigger: ACGACGACCCTCAACGAAGCAGCCAGTGCTGCAGGA...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGACAGCTGCGTTAGCTaGTTCACACAGATTGTTGGT +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGDSCVS*FTQIVG
Trigger: ACCAACAATCTGTGTGAAGCAGCTAACGCAGCTGTC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGCCCTCTTCACTGCATTaGCAGCAGCCTGGAGCCGTT +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRPSSLH*QQPGAV
Trigger: AACGGCTCCAGGCTGCTGGCAATGCAGTGAAGAGGG...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACATCTCTTCCTGTGCTaGGATAATCTGGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVHLFLC*DNLGNA
Trigger: GGCATTGCCCAGATTATCGCAGCACAGGAAGAGATG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGCTTCACATACTCCTTaGGCAGGAAGTCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGASHTP*AGSPSG
Trigger: ACCTGAAGGACTTCCTGCCCAAGGAGTATGTGAAGC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCTCTTACGCCAAGCTTTaGAGGCAGCATCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPSYAKL*RQHPGQ
Trigger: TTGGCCAGGATGCTGCCTCCAAAGCTTGGCGTAAGA...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCCATCAGCGAGGATCTTaGCAGCACTCAGGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPHQRGS*QHSGAF
Trigger: GAAAGCTCCTGAGTGCTGCCAAGATCCTCGCTGATG...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGATGTCGTTGATGGGCTaGACTGGATTCTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGMSLMG*TGFSRS
Trigger: ACTCCTGGAGAATCCAGTCCAGCCCATCAACGACAT...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCTGTTGGCCACCTCCTTaGCTGACTGTACAAACTGGC +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPCWPPP*LTVQTG
Trigger: GCCAGTTTGTACAGTCAGCCAAGGAGGTGGCCAACA...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGATGGCTGTCCTCACCATaGTTGTCTGGTAATCTACGA +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGWLSSP*LSGNLR
Trigger: TCGTAGATTACCAGACAACCATGGTGAGGACAGCCA...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGGCTGGTGTTTGACTTaGTTACCATCTCCTGAACAG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGGWCLT*LPSPEQ
Trigger: CTGTTCAGGAGATGGTAACCAAGTCAAACACCAGCC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGTTCCAGGTAACCATTaGCACACTCCCGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPVPGNH*HTPGHS
Trigger: ACTATGGCCGGGAGTGTGCCAATGGTTACCTGGAAC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAGAAATGAGTTTCTCCTaGCTAGCATGGCCCTGGACA +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVEMSFS*LAWPWT
Trigger: TGTCCAGGGCCATGCTAGCCAGGAGAAACTCATTTC...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAATCCACATTCTGGTCTaGGTAGAAGAACTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGIHILV*VEELSP
Trigger: CGGAGAAAGTTCTTCTACTCAGACCAGAATGTGGAT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTGCTTCTGTTCATTGTaGGGTCCAAACTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGCFCSL*GPNWIW
Trigger: CCAGATCCAGTTTGGACCTCACAATGAACAGAAGCA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACAATTCTTGTGTGCCTaGAAGATCTTACGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVQFLCA*KILRSP
Trigger: GGGAGAGCGTAAGATCTTTCAGGCACACAAGAATTG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGCGGTTGTACTGCTGCTaGAGGACTGTTGACTTTTTG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGRLYCC*RTVDFL
Trigger: CAAAAAGTCAACAGTCCTTCAGCAGCAGTACAACCG...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCACTCAGCTGCATTGCTaGAGCCTGGTCCTGAATTGT +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPTQLHC*SLVLNC
Trigger: ACAATTCAGGACCAGGCTTCAGCAATGCAGCTGAGT...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACGTCCTTTACTGCATTaGTCAGCACCACCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVRPLLH*SAPPEF
Trigger: AAACTCAGGTGGTGCTGATCAATGCAGTAAAGGACG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGATTGCCTCAGAGTCCTaGTCTGCTTTGACCTTGCAA +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGIASES*SALTLQ
Trigger: TTGCAAGGTCAAAGCAGATCAGGACTCTGAGGCAAT...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCCTCTGCAGGATCTCCTaGTGTCAGGTTTACCACAGA +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPLCRIS*CQVYHR
Trigger: TCTGTGGTAAACCTGACAGCAGGAGATCCTGCAGAG...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGCTTCACGCAGTCGCTaGTGCTGTTCCTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRASRSR*CCSSLS
Trigger: TGACAGTGAGGAACAGCAGCAGCGACTGCGTGAAGC...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGCTGTGTTGCAGAGGCTaGAGCTTGCTTGGCTGCATG +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRLCCRG*SLLGCM
Trigger: CATGCAGCCAAGCAAGCTGCAGCCTCTGCAACACAG...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGACGGCAAGGAGAAGTTTaGTTGAAGACATGGATATGC +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGRQGEV*LKTWIC
Trigger: GCATATCCATGTCTTCAAGCAAACTTCTCCTTGCCG...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCTGGCATTTTGGGAGATaGCAGTCATGGCCTCACCTA +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPWHFGR*QSWPHL
Trigger: TAGGTGAGGCCATGACTGGCATCTCCCAAAATGCCA...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGAGTCTGGTCCAGAAGTaGCATCTGCTGTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRSLVQK*HLLWVA
Trigger: AGCCACCCACAGCAGATGGCACTTCTGGACCAGACT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGCAGTATATAGCAACTaGAAGGCAGACTCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGAVYSN*KADSAN
Trigger: GTTGGCAGAGTCTGCCTTGCAGTTGCTATATACTGC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGAGACACAGCACTGGCTaGTGTAATGCAGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRRHSTG*CNAGLG
Trigger: ACCCAGGCCTGCATTACAGCAGCCAGTGCTGTGTCT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGCCTGTCGACAGGAATTaGCAGCAGCAACGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRPVDRN*QQQRLW
Trigger: CCAAAGCCGTTGCTGCTGGCAATTCCTGTCGACAGG...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGAGTGTCCAGTTAGCTaGTGCTTCAGGTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPECPVS*CFRSGF
Trigger: AAACCCAGACCTGAAGCAGCAGCTAACTGGACACTC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGTACACCATGGTAGATaGCTCAAATTGCATCGTCTT +
Preference number: 4 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTVHHGR*LKLHRL
Trigger: AAGACGATGCAATTTGAGCCATCTACCATGGTGTAC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTGCATTAGAACATCCTaGAAGTGGGGGTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGCIRTS*KWGSVS
Trigger: TGACACTGACCCCCACTTCCAGGATGTTCTAATGCA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTCGACTAGCTGTTCTTaGCACACAGGTGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGSTSCS*HTGELI
Trigger: AATCAGCTCACCTGTGTGCCAAGAACAGCTAGTCGA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGTTTGCTTGAAGACATaGATATGCCCTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGVCLKT*ICPSGW
Trigger: CCAACCTGAAGGGCATATCCATGTCTTCAAGCAAAC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGCAATGATGTCACATTaGTCACCATCACCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGAMMSH*SPSPWQ
Trigger: CTGCCAAGGTGATGGTGACCAATGTGACATCATTGC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGTGGTGGCTGCAGCGATaGACTTGGCAGCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRWWLQR*TWQLLG
Trigger: TCCTAGAAGCTGCCAAGTCCATCGCTGCAGCCACCA...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGATCCAGTGCATTGGCTaGAATGGCGCCCACCTTTCC +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRIQCIG*NGAHLS
Trigger: GGAAAGGTGGGCGCCATTCCAGCCAATGCACTGGAT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCTGGCCAGCGGCTCAATaGGATGAGAAATTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPWPAAQ*DEKFLA
Trigger: TGCAAGAAATTTCTCATCTCATTGAGCCGCTGGCCA...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGTGTCGAGGTCAGCAATaGTACCAGACACAGCACTGG +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRCRGQQ*YQTQHW
Trigger: CCAGTGCTGTGTCTGGTATCATTGCTGACCTCGACA...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCCAGCCTTCACTGTCTTaGGCAATGATGTCACATTGG +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPQPSLS*AMMSHW
Trigger: CCAATGTGACATCATTGCTCAAGACAGTGAAGGCTG...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGAGCAGCAACGTCTCATaGTCTTCCACTCCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRSSNVS*SSTPCS
Trigger: GGAACAGGGAGTGGAAGAGCATGAGACGTTGCTGCT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGATGGGAGTGGATCTCATaGTTTGATTCATCCATCTTG +
Preference number: 4 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGWEWIS*FDSSIL
Trigger: CAAGATGGATGAATCAAAGCATGAGATCCACTCCCA...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGATTCAATCGGCTCTGTaGTTCTTGAAATGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGIQSAL*FLKCPR
Trigger: ACGGGGACATTTCAAGAAGCACAGAGCCGATTGAAT...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTTGAAGACATGGATATaGCCTTCAGGTTGGACACCA +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGLKTWI*PSGWTP
Trigger: TGGTGTCCAACCTGAAGGGCATATCCATGTCTTCAA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGCTTGCACCAGTTCTGTaGCGGCCTGATTTAACCCAG +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRLAPVL*RPDLTQ
Trigger: CTGGGTTAAATCAGGCCGCCACAGAACTGGTGCAAG...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGCAGATTTCCATTCTTaGCATTTTGGGAGATGCCAG +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGADFHS*HFGRCQ
Trigger: CTGGCATCTCCCAAAATGCCAAGAATGGAAATCTGC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGTCCAGCTTGGCTGTTaGGGTCAGAGACACCAACTA +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRVQLGC*GQRHQL
Trigger: TAGTTGGTGTCTCTGACCCCAACAGCCAAGCTGGAC...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGTGTTCAGAGCCGCAATaGCTGTCTCACACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRCSEPQ*LSHTPA
Trigger: AGCTGGAGTGTGAGACAGCCATTGCGGCTCTGAACA...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCTACCACCAGCCTCCTTaGCAGTATATAGCAACTGCA +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPYHQPP*QYIATA
Trigger: TGCAGTTGCTATATACTGCCAAGGAGGCTGGTGGTA...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGACCGTCTCATTCTCCTaGTCTTCGAAGGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRTVSFS*SSKAAA
Trigger: AGCTGCAGCCTTCGAAGACCAGGAGAATGAGACGGT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGTTTCTTGCACTGCAGTaGGCATCTGGGTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRFLALQ*ASGCAK
Trigger: CTTTGCACACCCAGATGCTCACTGCAGTGCAAGAAA...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCCACTGTCTTGAGCAATaGTGTCACATTGGTCACCAT +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPHCLEQ*CHIGHH
Trigger: ATGGTGACCAATGTGACATCATTGCTCAAGACAGTG...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGAACTCATCGTCTGTGTaGAACTTCTGCTTTAGCTTC +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGNSSSV*NFCFSF
Trigger: GAAGCTAAAGCAGAAGTTGCACACAGACGATGAGTT...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGTTACGCTCTCCCTTCTaGTTCACATACTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRLRSPF*FTYSLG
Trigger: GCCCAAGGAGTATGTGAAGCAGAAGGGAGAGCGTAA...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTATCAATTTCACTCATCTaGCCACAATTCTTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVSISLI*PQFLCA
Trigger: GGCACACAAGAATTGTGGGCAGATGAGTGAAATTGA...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTATTGTACAACACTCAGTaGAGAATCCATCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVLYNTQ*RIHLQR
Trigger: CCTTTGGAGATGGATTCTGCACTGAGTGTTGTACAA...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGCTGCAAGGCAGACTCTaGCAACGTTTTAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRLQGRL*QRFSLV
Trigger: GACCAGACTAAAACGTTGGCAGAGTCTGCCTTGCAG...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGTCCAAACTGGATCTaGCACTGGAAGCCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRGPNWI*HWKPAN
Trigger: ATTTGCAGGCTTCCAGTGCCAGATCCAGTTTGGACC...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGAGAACATCCTGGAAGTaGGGGTCAGTGTCACTTTCC +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRRTSWK*GSVSLS
Trigger: GGAAAGTGACACTGACCCCCACTTCCAGGATGTTCT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGAGTGCAGCCAGAACATaGGAGACCTTCTCTGACACT +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRSAART*ETFSDT
Trigger: AGTGTCAGAGAAGGTCTCCCATGTTCTGGCTGCACT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGTTTGGGGTCATCATCTaGCAGAAAGAGCCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRFGVII*QKEPKV
Trigger: GACTTTGGGCTCTTTCTGTCAGATGATGACCCCAAA...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGTGGATCTCATGCTTTaGTTCATCCATCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LRYGSINNTLGALILWRGVDLML*FIHLVL
Trigger: AAGAACAAGATGGATGAATCAAAGCATGAGATCCAC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCAAGGAGAAGTTTGCTTaGAGACATGGATATGCCCTT +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPKEKFA*RHGYAL
Trigger: AAGGGCATATCCATGTCTTCAAGCAAACTTCTCCTT...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGAGCTACTTGCTTGGCTaGGGAAATGAGTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRSYLLG*GNEFLL
Trigger: CAGGAGAAACTCATTTCCTCAGCCAAGCAAGTAGCT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCACAGCTGTTACACAATaGAGATGTGTGTTTGGCTAC +
Preference number: 4 (lower is better)
Translates to: VESPLLESDLFGFTTLKPTAVTQ*RCVFGY
Trigger: GTAGCCAAACACACATCTGCATTGTGTAACAGCTGT...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAAGTGAATACTCATCATaGTTGGTGATACCAATTCGG +
Preference number: 4 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVSEYSS*LVIPIR
Trigger: CCGAATTGGTATCACCAACCATGATGAGTATTCACT...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGTGATGGCATCTACCTaGGAGTGGATCTCATGCTTT +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRVMAST*EWISCF
Trigger: AAAGCATGAGATCCACTCCCAGGTAGATGCCATCAC...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR TCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGACTCATCATGGTTGGTaGTACCAATTCGGGCACAAA +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRTHHGW*YQFGHK
Trigger: TTTGTGCCCGAATTGGTATCACCAACCATGATGAGT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGCATCTACCTGGGAGTaGATCTCATGCTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRASTWE*ISCFDS
Trigger: TGAATCAAAGCATGAGATCCACTCCCAGGTAGATGC...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR GCA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGTCTGTGTGCAACTTCTaGTTTAGCTTCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: KLRYGSINNTLGALILWRSVCNF*FSFSIF
Trigger: GAAGATGGAGAAGCTAAAGCAGAAGTTGCACACAGA...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp TACCGACCGGCAGGCCCAGCTCCGGTGGCGTGGGCCTTCACGTGCTaGAGCAGCTCATTGAGGGCCTGGGTGACAGCCGTGGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: YRPAGPAPVAWAFTC*SSSLRAWVTAVAAA
Trigger: AGCAGCAGCCACGGCTGTCACCCAGGCCCTCAATGAGCTGCTGCAGCACGTGAAGGCCCACGCCACCGGAGCTGGGCCTGCCGGTCGGTA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp AGCGCTGGCGGGCTGAGCACTGCGAAGCAGTTCCGACACAGCCCCTaGAAGGCCCTTTGCTGCTTGCAGAAGGGGCCGGCCATTGCCGCC +
Preference number: 5 (lower is better)
Translates to: SAGGLSTAKQFRHSP*KALCCLQKGPAIAA
Trigger: GGCGGCAATGGCCGGCCCCTTCTGCAAGCAGCAAAGGGCCTTGCAGGGGCTGTGTCGGAACTGCTTCGCAGTGCTCAGCCCGCCAGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 90 bp TCATACCGACCGGCAGGCCCAGCTCCGGTGGCGTGGGCCTTCACGTaGTGCAGCAGCTCATTGAGGGCCTGGGTGACAGCCGTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SYRPAGPAPVAWAFT*CSSSLRAWVTAVAA
Trigger: AGCAGCCACGGCTGTCACCCAGGCCCTCAATGAGCTGCTGCAGCACGTGAAGGCCCACGCCACCGGAGCTGGGCCTGCCGGTCGGTATGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp CCACGTTCCCGGCTGCCTGCAGCAGGTTCTGACGGGGCTCAGCGCTaGCGGGCTGAGCACTGCGAAGCAGTTCCGACACAGCCCCTGCAA +
Preference number: 5 (lower is better)
Translates to: PRSRLPAAGSDGAQR*RAEHCEAVPTQPLQ
Trigger: TTGCAGGGGCTGTGTCGGAACTGCTTCGCAGTGCTCAGCCCGCCAGCGCTGAGCCCCGTCAGAACCTGCTGCAGGCAGCCGGGAACGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 90 bp TTGGTGGCCATGCGAAGCCCCTCAGCTGCTTCACGCAGTCGCTGCTaGTGTTCCTCACTGTCAGGGTGGGCGGCTGCTCCCTTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: LVAMRSPSAASRSRC*CSSLSGWAAAPLAA
Trigger: GGCGGCCAAGGGAGCAGCCGCCCACCCTGACAGTGAGGAACAGCAGCAGCGACTGCGTGAAGCAGCTGAGGGGCTTCGCATGGCCACCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp CCTGCAGCAGGTTCTGACGGGGCTCAGCGCTGGCGGGCTGAGCACTaGGAAGCAGTTCCGACACAGCCCCTGCAAGGCCCTTTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: PAAGSDGAQRWRAEH*EAVPTQPLQGPLLL
Trigger: AAGCAGCAAAGGGCCTTGCAGGGGCTGTGTCGGAACTGCTTCGCAGTGCTCAGCCCGCCAGCGCTGAGCCCCGTCAGAACCTGCTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 90 bp GCATTGGTGGCCATGCGAAGCCCCTCAGCTGCTTCACGCAGTCGCTaGTGCTGTTCCTCACTGTCAGGGTGGGCGGCTGCTCCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: ALVAMRSPSAASRSR*CCSSLSGWAAAPLA
Trigger: GGCCAAGGGAGCAGCCGCCCACCCTGACAGTGAGGAACAGCAGCAGCGACTGCGTGAAGCAGCTGAGGGGCTTCGCATGGCCACCAATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp TCAGTGGCTTGGTCATACCGACCGGCAGGCCCAGCTCCGGTGGCGTaGGCCTTCACGTGCTGCAGCAGCTCATTGAGGGCCTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: SVAWSYRPAGPAPVA*AFTCCSSSLRAWVT
Trigger: TGTCACCCAGGCCCTCAATGAGCTGCTGCAGCACGTGAAGGCCCACGCCACCGGAGCTGGGCCTGCCGGTCGGTATGACCAAGCCACTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000134623.2
CDS GCA 90 bp CTGCGAAGCAGTTCCGACACAGCCCCTGCAAGGCCCTTTGCTGCTTaGAGAAGGGGCCGGCCATTGCCGCCTTCATCCTCCAGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LRSSSDTAPARPFAA*RRGRPLPPSSSSRA
Trigger: TGCCCTGCTGGAGGATGAAGGCGGCAATGGCCGGCCCCTTCTGCAAGCAGCAAAGGGCCTTGCAGGGGCTGTGTCGGAACTGCTTCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 90 bp GGCGTTCTGCGCAGCTGCATTGGTGGCCATGCGAAGCCCCTCAGCTaGTTCACGCAGTCGCTGCTGCTGTTCCTCACTGTCAGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: GVLRSCIGGHAKPLS*FTQSLLLFLTVRVG
Trigger: GCCCACCCTGACAGTGAGGAACAGCAGCAGCGACTGCGTGAAGCAGCTGAGGGGCTTCGCATGGCCACCAATGCAGCTGCGCAGAACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp AGCACTGCGAAGCAGTTCCGACACAGCCCCTGCAAGGCCCTTTGCTaGTTGCAGAAGGGGCCGGCCATTGCCGCCTTCATCCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: STAKQFRHSPCKALC*LQKGPAIAAFILQQ
Trigger: CTGCTGGAGGATGAAGGCGGCAATGGCCGGCCCCTTCTGCAAGCAGCAAAGGGCCTTGCAGGGGCTGTGTCGGAACTGCTTCGCAGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 90 bp CTGAGCACTGCGAAGCAGTTCCGACACAGCCCCTGCAAGGCCCTTTaGTGCTTGCAGAAGGGGCCGGCCATTGCCGCCTTCATCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LSTAKQFRHSPCKAL*CLQKGPAIAAFILQ
Trigger: CTGGAGGATGAAGGCGGCAATGGCCGGCCCCTTCTGCAAGCAGCAAAGGGCCTTGCAGGGGCTGTGTCGGAACTGCTTCGCAGTGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 90 bp CTGGCCTTGTCCAGAACGTCGCTGGCTGTGTCAAGCACAATGGCCTaGACTGCAGGATCTGATGTCAGCGCAGCCACACCCCGCGCAGCC +
Preference number: 5 (lower is better)
Translates to: LALSRTSLAVSSTMA*TAGSDVSAATPRAA
Trigger: GGCTGCGCGGGGTGTGGCTGCGCTGACATCAGATCCTGCAGTGCAGGCCATTGTGCTTGACACAGCCAGCGACGTTCTGGACAAGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp GCCGCAGCCACCATACGGGCAGCGGAAATGAGGCCCTGCGACCACTaGCCATCATCCAGTGCATTGGCTGGAATGGCGCCCACCTTTCCT +
Preference number: 5 (lower is better)
Translates to: AAATIRAAEMRPCDH*PSSSALAGMAPTFP
Trigger: AGGAAAGGTGGGCGCCATTCCAGCCAATGCACTGGATGATGGGCAGTGGTCGCAGGGCCTCATTTCCGCTGCCCGTATGGTGGCTGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp GGCTGCTGGCCTTGTCCAGAACGTCGCTGGCTGTGTCAAGCACAATaGCCTGCACTGCAGGATCTGATGTCAGCGCAGCCACACCCCGCG +
Preference number: 5 (lower is better)
Translates to: GCWPCPERRWLCQAQ*PALQDLMSAQPHPA
Trigger: CGCGGGGTGTGGCTGCGCTGACATCAGATCCTGCAGTGCAGGCCATTGTGCTTGACACAGCCAGCGACGTTCTGGACAAGGCCAGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 90 bp CCTTCACGGGGAGCAAGCTGCTGGCTGACAGCGGCAAGCGAAGCCTaGTCTAGGTCCCGCAAGCAGCTGTTCAGAGCCGCAATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: PSRGASCWLTAASEA*SRSRKQLFRAAMAV
Trigger: GACAGCCATTGCGGCTCTGAACAGCTGCTTGCGGGACCTAGATCAGGCTTCGCTTGCCGCTGTCAGCCAGCAGCTTGCTCCCCGTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp CACGTGCTGCAGCAGCTCATTGAGGGCCTGGGTGACAGCCGTGGCTaGTGCTCCTACCCCTCGAAGCAGCTGTCCATCTTCTGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: HVLQQLIEGLGDSRG*CSYPSKQLSIFCSC
Trigger: GCAGCTACAGAAGATGGACAGCTGCTTCGAGGGGTAGGAGCAGCAGCCACGGCTGTCACCCAGGCCCTCAATGAGCTGCTGCAGCACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp CTCCTTGGGTTTGGCCCTGGGCTTCAGCTGCTCCAGCTTCTTGGCTaGAGCCTCGATGGCGGCTGCGGCTCCCAAGAGTTCATTCTCAGC +
Preference number: 5 (lower is better)
Translates to: LLGFGPGLQLLQLLG*SLDGGCGSQEFILS
Trigger: GCTGAGAATGAACTCTTGGGAGCCGCAGCCGCCATCGAGGCTGCAGCCAAGAAGCTGGAGCAGCTGAAGCCCAGGGCCAAACCCAAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp TGGCCACTGGTGATCTGCTGCTGGGCAGGTGGCATGCTCCCCACCTaGAAATTCTCAGGACCAGAGGCTCCAGAGCGCATGATGGCTGGC +
Preference number: 5 (lower is better)
Translates to: WPLVICCWAGGMLPT*KFSGPEAPERMMAG
Trigger: GCCAGCCATCATGCGCTCTGGAGCCTCTGGTCCTGAGAATTTCCAGGTGGGGAGCATGCCACCTGCCCAGCAGCAGATCACCAGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp GCTGCTCCTACCCCTCGAAGCAGCTGTCCATCTTCTGTAGCTGCTTaGGAGGCAGACACACAGCCCTCCACAGCTTTGGCCACCAGTCGC +
Preference number: 5 (lower is better)
Translates to: AAPTPRSSCPSSVAA*EADTQPSTALATSR
Trigger: GCGACTGGTGGCCAAAGCTGTGGAGGGCTGTGTGTCTGCCTCGCAAGCAGCTACAGAAGATGGACAGCTGCTTCGAGGGGTAGGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp GGCTGCTGCTCCTACCCCTCGAAGCAGCTGTCCATCTTCTGTAGCTaGTTGCGAGGCAGACACACAGCCCTCCACAGCTTTGGCCACCAG +
Preference number: 5 (lower is better)
Translates to: GCCSYPSKQLSIFCS*LRGRHTALHSFGHQ
Trigger: CTGGTGGCCAAAGCTGTGGAGGGCTGTGTGTCTGCCTCGCAAGCAGCTACAGAAGATGGACAGCTGCTTCGAGGGGTAGGAGCAGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp GTGCTGCAGCAGCTCATTGAGGGCCTGGGTGACAGCCGTGGCTGCTaGTCCTACCCCTCGAAGCAGCTGTCCATCTTCTGTAGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: VLQQLIEGLGDSRGC*SYPSKQLSIFCSCL
Trigger: CAAGCAGCTACAGAAGATGGACAGCTGCTTCGAGGGGTAGGAGCAGCAGCCACGGCTGTCACCCAGGCCCTCAATGAGCTGCTGCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp CTCCAGGCGCTGCACCAACTTCTTCTTGATGGCGTTCTGCGCAGCTaGATTGGTGGCCATGCGAAGCCCCTCAGCTGCTTCACGCAGTCG +
Preference number: 5 (lower is better)
Translates to: LQALHQLLLDGVLRS*IGGHAKPLSCFTQS
Trigger: CGACTGCGTGAAGCAGCTGAGGGGCTTCGCATGGCCACCAATGCAGCTGCGCAGAACGCCATCAAGAAGAAGTTGGTGCAGCGCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp CCATCTCCAAAGGTCCACATGCCTCCTGAGCCTTCTGAGCAGCAGTaGGCAGCTCGGCCAGGGCAGTGCCTAGGTTCTTTGCGCACTGAC +
Preference number: 5 (lower is better)
Translates to: PSPKVHMPPEPSEQQ*AARPGQCLGSLRTD
Trigger: GTCAGTGCGCAAAGAACCTAGGCACTGCCCTGGCCGAGCTGCGCACTGCTGCTCAGAAGGCTCAGGAGGCATGTGGACCTTTGGAGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp TACCGACCGGCAGGCCCAGCTCCGGTGGCGTGGGCCTTTGCTAGCTaGATTAGAACATCCTGGAAGTGGGGGTCAGTGTCACTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: YRPAGPAPVAWAFAS*IRTSWKWGSVSLSP
Trigger: TGGGGAAAGTGACACTGACCCCCACTTCCAGGATGTTCTAATGCAGCTAGCAAAGGCCCACGCCACCGGAGCTGGGCCTGCCGGTCGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000125509.2
CDS CCA 90 bp CGGCAAGGAGAAGTTTGCTTGAAGACATGGATATGCCCTTCAGGTTaGACACCACCTGGGCTCGGTCCTCCTGGCTCGGGGCCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: RQGEVCLKTWICPSG*TPPGLGPPGSGPVR
Trigger: CCGGACAGGCCCCGAGCCAGGAGGACCGAGCCCAGGTGGTGTCCAACCTGAAGGGCATATCCATGTCTTCAAGCAAACTTCTCCTTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp GCGAAGCCTGATCTAGGTCCCGCAAGCAGCTGTTCAGAGCCGCAATaGCTGTCTCACACTCCAGCTGCCCTGGGGCTTTGTCCCTCATGC +
Preference number: 5 (lower is better)
Translates to: AKPDLGPASSCSEPQ*LSHTPAALGLCPSC
Trigger: GCATGAGGGACAAAGCCCCAGGGCAGCTGGAGTGTGAGACAGCCATTGCGGCTCTGAACAGCTGCTTGCGGGACCTAGATCAGGCTTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp CCACAGCTGCAGGCTTGGCTTGTGAGGCCAGTCGGCCATAGTCACTaGTCAGCTGGTTGGCAAGAGGGCCTAGCTCTTCAGGGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: PQLQAWLVRPVGHSH*SAGWQEGLALQGWC
Trigger: ACACCAGCCCTGAAGAGCTAGGCCCTCTTGCCAACCAGCTGACCAGTGACTATGGCCGACTGGCCTCACAAGCCAAGCCTGCAGCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp TCAGTGGCTTGGTCATACCGACCGGCAGGCCCAGCTCCGGTGGCGTaGGCCTTTGCTAGCTGCATTAGAACATCCTGGAAGTGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: SVAWSYRPAGPAPVA*AFASCIRTSWKWGS
Trigger: TGACCCCCACTTCCAGGATGTTCTAATGCAGCTAGCAAAGGCCCACGCCACCGGAGCTGGGCCTGCCGGTCGGTATGACCAAGCCACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125509.2
CDS GCA 90 bp GCTGCATGCTCCAGGCGCTGCACCAACTTCTTCTTGATGGCGTTCTaGGCAGCTGCATTGGTGGCCATGCGAAGCCCCTCAGCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: AACSRRCTNFFLMAF*AAALVAMRSPSAAS
Trigger: TGAAGCAGCTGAGGGGCTTCGCATGGCCACCAATGCAGCTGCGCAGAACGCCATCAAGAAGAAGTTGGTGCAGCGCCTGGAGCATGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp TTGGCCAGGCAGGCAGCTGACACAGCGGTTCAGGGCTTGGGTCACTaGTTTAGCTACCTGAGCAAGCCTTTGCTGGCTTTCTGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: LARQAADTAVQGLGH*FSYLSKPLLAFWVP
Trigger: GGGGACCCAGAAAGCCAGCAAAGGCTTGCTCAGGTAGCTAAAGCAGTGACCCAAGCCCTGAACCGCTGTGTCAGCTGCCTGCCTGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp TGCACTGCAGGATCTGATGTCAGCGCAGCCACACCCCGCGCAGCCTaGGCTAGTGACCTTAGTCCACCAGCTACATCCCGAGCTGCAATA +
Preference number: 5 (lower is better)
Translates to: CTAGSDVSAATPRAA*ASDLSPPATSRAAI
Trigger: TATTGCAGCTCGGGATGTAGCTGGTGGACTAAGGTCACTAGCCCAGGCTGCGCGGGGTGTGGCTGCGCTGACATCAGATCCTGCAGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp TCTGAAGGGTCAGCAGCACGTGGTCCAGCAGTTCCAGGTAACCATTaGCACACTCCCGGCCATAGTGCAGGGCTCGGAGCCGTACATCAG +
Preference number: 5 (lower is better)
Translates to: SEGSAARGPAVPGNH*HTPGHSAGLGAVHQ
Trigger: CTGATGTACGGCTCCGAGCCCTGCACTATGGCCGGGAGTGTGCCAATGGTTACCTGGAACTGCTGGACCACGTGCTGCTGACCCTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp TGGTATCAGTGGCTTGGTCATACCGACCGGCAGGCCCAGCTCCGGTaGCGTGGGCCTTTGCTAGCTGCATTAGAACATCCTGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: WYQWLGHTDRQAQLR*RGPLLAALEHPGSG
Trigger: CCCACTTCCAGGATGTTCTAATGCAGCTAGCAAAGGCCCACGCCACCGGAGCTGGGCCTGCCGGTCGGTATGACCAAGCCACTGATACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125509.2
CDS TCA 90 bp GCAAAGCCTCTTGAGAGATTCCTTCACGGGGAGCAAGCTGCTGGCTaGCAGCGGCAAGCGAAGCCTGATCTAGGTCCCGCAAGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: AKPLERFLHGEQAAG*QRQAKPDLGPASSC
Trigger: ACAGCTGCTTGCGGGACCTAGATCAGGCTTCGCTTGCCGCTGTCAGCCAGCAGCTTGCTCCCCGTGAAGGAATCTCTCAAGAGGCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp AGAGGGGGTAGAGTCTCAAAGTCATCCAGAGTGGCCTGGGCAGCCTaGACAGCCTGCATGCTGGAGTTAATGGTTCCAGTGAGCGCCTGC +
Preference number: 5 (lower is better)
Translates to: RGGRVSKSSRVAWAA*TACMLELMVPVSAC
Trigger: GCAGGCGCTCACTGGAACCATTAACTCCAGCATGCAGGCTGTGCAGGCTGCCCAGGCCACTCTGGATGACTTTGAGACTCTACCCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 90 bp GGTACAGGCCACCAGCTGGGAAGTGGACAGAGCACATTGCGTAGCTaGAGCAATCACTTGGGTCTGAAGCCCGGAATCCTCTGTGCGCTG +
Preference number: 5 (lower is better)
Translates to: GTGHQLGSGQSTLRS*SNHLGLKPGILCAL
Trigger: CAGCGCACAGAGGATTCCGGGCTTCAGACCCAAGTGATTGCTGCAGCTACGCAATGTGCTCTGTCCACTTCCCAGCTGGTGGCCTGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp TGCCATCTGCTGTGGGTGGCTCAGGGTCTTAGACGCAGCACCCACTaGAGCCAGGGTGAGTGGTTCAAAGTACTGGGCCATTTGGGACAC +
Preference number: 5 (lower is better)
Translates to: CHLLWVAQGLRRSTH*SQGEWFKVLGHLGH
Trigger: GTGTCCCAAATGGCCCAGTACTTTGAACCACTCACCCTGGCTGCAGTGGGTGCTGCGTCTAAGACCCTGAGCCACCCACAGCAGATGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp TTGCTGGCATCTCCAACGGCTCGTAGGGCATTATCCACGTCTCTTTaGCCAGGCAGGCAGCTGACACAGCGGTTCAGGGCTTGGGTCACT +
Preference number: 5 (lower is better)
Translates to: LLASPTARRALSTSL*PGRQLTQRFRAWVT
Trigger: AGTGACCCAAGCCCTGAACCGCTGTGTCAGCTGCCTGCCTGGCCAAAGAGACGTGGATAATGCCCTACGAGCCGTTGGAGATGCCAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp GTGGCTCAGGGTCTTAGACGCAGCACCCACTGCAGCCAGGGTGAGTaGTTCAAAGTACTGGGCCATTTGGGACACCTTGTGTCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: VAQGLRRSTHCSQGE*FKVLGHLGHLVSQL
Trigger: CAGCTGGGACACAAGGTGTCCCAAATGGCCCAGTACTTTGAACCACTCACCCTGGCTGCAGTGGGTGCTGCGTCTAAGACCCTGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp GCTCTGGGGAACAGAAGACCGCCAGTTCCTGACGTATGTGCTCTGTaGTTGCCTCTAGGGCCCGTGTGCCTTTGGTGGCCTCATCTTCCA +
Preference number: 5 (lower is better)
Translates to: ALGNRRPPVPDVCAL*LPLGPVCLWWPHLP
Trigger: TGGAAGATGAGGCCACCAAAGGCACACGGGCCCTAGAGGCAACCACAGAGCACATACGTCAGGAACTGGCGGTCTTCTGTTCCCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGCCGCCTCCACCATCTaGGCGGTGGCATCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTAASTI*AVASAR
Trigger: CCTCGCTGATGCCACCGCCAAGATGGTGGAGGCGGC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 90 bp GAAGTGGACAGAGCACATTGCGTAGCTGCAGCAATCACTTGGGTCTaGAGCCCGGAATCCTCTGTGCGCTGGGCCACACTCTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: EVDRAHCVAAAITWV*SPESSVRWATLLAL
Trigger: CAAGGCCAAGAGTGTGGCCCAGCGCACAGAGGATTCCGGGCTTCAGACCCAAGTGATTGCTGCAGCTACGCAATGTGCTCTGTCCACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp CCCCCAGCAGCTTGGCGATGGCAGAGCTCACCGCTTTGGTGCTGTTaGCAAGATCTTGGGTACACTTCTCCATTGTTTCCCCGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: PPAAWRWQSSPLWCC*QDLGYTSPLFPRVR
Trigger: CCTTACCCGGGGAAACAATGGAGAAGTGTACCCAAGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGCCATCGCCAAGCTGCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp CACATTGGTCACCATCACCTTGGCAGAGTTCTTGAGCTGCCACACTaGAGGGTCATCCCCAACTTTGCCCGCTGCAGCCTTCGTAGCGCT +
Preference number: 5 (lower is better)
Translates to: HIGHHHLGRVLELPH*RVIPNFARCSLRSA
Trigger: AGCGCTACGAAGGCTGCAGCGGGCAAAGTTGGGGATGACCCTGCAGTGTGGCAGCTCAAGAACTCTGCCAAGGTGATGGTGACCAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp TCCTGGCCAAGAGGGGGTAGAGTCTCAAAGTCATCCAGAGTGGCCTaGGCAGCCTGCACAGCCTGCATGCTGGAGTTAATGGTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: SWPRGGRVSKSSRVA*AACTACMLELMVPV
Trigger: CACTGGAACCATTAACTCCAGCATGCAGGCTGTGCAGGCTGCCCAGGCCACTCTGGATGACTTTGAGACTCTACCCCCTCTTGGCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS CCA 90 bp ATGTCCCCGTGCTTGGAGGAAGCGAGTCACTCAGGAGTCGCTTGCTaGCATCTCCAACGGCTCGTAGGGCATTATCCACGTCTCTTTGGC +
Preference number: 5 (lower is better)
Translates to: MSPCLEEASHSGVAC*HLQRLVGHYPRLFG
Trigger: GCCAAAGAGACGTGGATAATGCCCTACGAGCCGTTGGAGATGCCAGCAAGCGACTCCTGAGTGACTCGCTTCCTCCAAGCACGGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp GCACGGGCAAACTGTGTGGGTTCCACCAGTCCTTGCTGTCCAGCTTaGCTGTTGGGGTCAGAGACACCAACTAGATATGCTGCCTGTGCG +
Preference number: 5 (lower is better)
Translates to: ARANCVGSTSPCCPA*LLGSETPTRYAACA
Trigger: CGCACAGGCAGCATATCTAGTTGGTGTCTCTGACCCCAACAGCCAAGCTGGACAGCAAGGACTGGTGGAACCCACACAGTTTGCCCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp TCTGCCAACGTTTTAGTCTGGTCCAGAAGTGCCATCTGCTGTGGGTaGCTCAGGGTCTTAGACGCAGCACCCACTGCAGCCAGGGTGAGT +
Preference number: 5 (lower is better)
Translates to: SANVLVWSRSAICCG*LRVLDAAPTAARVS
Trigger: ACTCACCCTGGCTGCAGTGGGTGCTGCGTCTAAGACCCTGAGCCACCCACAGCAGATGGCACTTCTGGACCAGACTAAAACGTTGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCCCCTGCAAGGCCCTTaGCTGCTTGCAGAAGGGGCC +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTPLQGP*LLAEGA
Trigger: GGCCCCTTCTGCAAGCAGCAAAGGGCCTTGCAGGGG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGATGGGCGGCTGCTCCCTaGGCCGCCTCCACCATCTTG +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGWAAAP*AASTIL
Trigger: CAAGATGGTGGAGGCGGCCAAGGGAGCAGCCGCCCA...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 90 bp GTCTTCGAAGGCTGCAGCTTTCTGGGCCGCCTTTACCAGGTTATCTaGGGCCCTCTTCACTGCATTGCCAGCAGCCTGGAGCCGTTTCAT +
Preference number: 5 (lower is better)
Translates to: VFEGCSFLGRLYQVI*GPLHCIASSLEPFH
Trigger: ATGAAACGGCTCCAGGCTGCTGGCAATGCAGTGAAGAGGGCCTCAGATAACCTGGTAAAGGCGGCCCAGAAAGCTGCAGCCTTCGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp CAATCTCCCCCAGCAGCTTGGCGATGGCAGAGCTCACCGCTTTGGTaGTGTTGCCAAGATCTTGGGTACACTTCTCCATTGTTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: QSPPAAWRWQSSPLW*CCQDLGYTSPLFPR
Trigger: CCGGGGAAACAATGGAGAAGTGTACCCAAGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGCCATCGCCAAGCTGCTGGGGGAGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp ATTGCCAGCAGCCTGGAGCCGTTTCATTGCCTCAGAGTCCTGATCTaGTTTGACCTTGCAAGCTACCAGGAGCTGAGCTGTGGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: IASSLEPFHCLRVLI*FDLASYQELSCGGS
Trigger: GCTGCCTCCACAGCTCAGCTCCTGGTAGCTTGCAAGGTCAAAGCAGATCAGGACTCTGAGGCAATGAAACGGCTCCAGGCTGCTGGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp TCCACAGCTTTGGCCACCAGTCGCCCAGCCTCGACTAGCTGTTCTTaGCACACAGGTGAGCTGATTGTAGGTGCTACCACCTTGGTACAG +
Preference number: 5 (lower is better)
Translates to: STALATSRPASTSCS*HTGELIVGATTLVQ
Trigger: CTGTACCAAGGTGGTAGCACCTACAATCAGCTCACCTGTGTGCCAAGAACAGCTAGTCGAGGCTGGGCGACTGGTGGCCAAAGCTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp GGGCAATCTCCCCCAGCAGCTTGGCGATGGCAGAGCTCACCGCTTTaGTGCTGTTGCCAAGATCTTGGGTACACTTCTCCATTGTTTCCC +
Preference number: 5 (lower is better)
Translates to: GQSPPAAWRWQSSPL*CCCQDLGYTSPLFP
Trigger: GGGAAACAATGGAGAAGTGTACCCAAGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGCCATCGCCAAGCTGCTGGGGGAGATTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp CATAGTTCTCATTGCCCTGGGCAATCTCCCCCAGCAGCTTGGCGATaGCAGAGCTCACCGCTTTGGTGCTGTTGCCAAGATCTTGGGTAC +
Preference number: 5 (lower is better)
Translates to: HSSHCPGQSPPAAWR*QSSPLWCCCQDLGY
Trigger: GTACCCAAGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGCCATCGCCAAGCTGCTGGGGGAGATTGCCCAGGGCAATGAGAACTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp CAAACTGTGTGGGTTCCACCAGTCCTTGCTGTCCAGCTTGGCTGTTaGGGTCAGAGACACCAACTAGATATGCTGCCTGTGCGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: QTVWVPPVLAVQLGC*GQRHQLDMLPVRLP
Trigger: AGGCAGCCGCACAGGCAGCATATCTAGTTGGTGTCTCTGACCCCAACAGCCAAGCTGGACAGCAAGGACTGGTGGAACCCACACAGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp GCTTGGCTTGTGAGGCCAGTCGGCCATAGTCACTGGTCAGCTGGTTaGCAAGAGGGCCTAGCTCTTCAGGGCTGGTGTTTGACTTGGTTA +
Preference number: 5 (lower is better)
Translates to: AWLVRPVGHSHWSAG*QEGLALQGWCLTWL
Trigger: TAACCAAGTCAAACACCAGCCCTGAAGAGCTAGGCCCTCTTGCCAACCAGCTGACCAGTGACTATGGCCGACTGGCCTCACAAGCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp CCAGCTCCGGTGGCGTGGGCCTTTGCTAGCTGCATTAGAACATCCTaGAAGTGGGGGTCAGTGTCACTTTCCCCAATTTGCTGCAACAGC +
Preference number: 5 (lower is better)
Translates to: PAPVAWAFASCIRTS*KWGSVSLSPICCNS
Trigger: GCTGTTGCAGCAAATTGGGGAAAGTGACACTGACCCCCACTTCCAGGATGTTCTAATGCAGCTAGCAAAGGCCCACGCCACCGGAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000125509.2
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAAAGAGCCCAAAGTCGTaGGGAGGGCCAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGKSPKS*GGPARA
Trigger: GGCCCTGGCTGGCCCTCCCAACGACTTTGGGCTCTT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGCGCTGGGCCACACTCTaGGCCTTGAGGACCAGGGCG +
Preference number: 5 (lower is better)
Translates to: LRYGSINNTLGALILWRGRWATL*ALRTRA
Trigger: CGCCCTGGTCCTCAAGGCCAAGAGTGTGGCCCAGCG...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTAGTTCCTCGGGAGGCTaGCACCAGTTCTGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTSSSGG*HQFCGG
Trigger: GCCGCCACAGAACTGGTGCAAGCCTCCCGAGGAACT...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTAGCTGCTCCAGCTTCTaGGCTGCAGCCTCGATGGCG +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTSCSSF*AAASMA
Trigger: CGCCATCGAGGCTGCAGCCAAGAAGCTGGAGCAGCT...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 90 bp AGCAGGGTCTGTGGACAAGGCCTTAGCGGCAAGGAGAAGTTTGCTTaGAGACATGGATATGCCCTTCAGGTTGGACACCACCTGGGCTCG +
Preference number: 5 (lower is better)
Translates to: SRVCGQGLSGKEKFA*RHGYALQVGHHLGS
Trigger: CGAGCCCAGGTGGTGTCCAACCTGAAGGGCATATCCATGTCTTCAAGCAAACTTCTCCTTGCCGCTAAGGCCTTGTCCACAGACCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp GAAATGTCCCCGTGCTTGGAGGAAGCGAGTCACTCAGGAGTCGCTTaGTGGCATCTCCAACGGCTCGTAGGGCATTATCCACGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: EMSPCLEEASHSGVA*WHLQRLVGHYPRLF
Trigger: AAAGAGACGTGGATAATGCCCTACGAGCCGTTGGAGATGCCAGCAAGCGACTCCTGAGTGACTCGCTTCCTCCAAGCACGGGGACATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp TACCTGCATAGTTCTCATTGCCCTGGGCAATCTCCCCCAGCAGCTTaGCGATGGCAGAGCTCACCGCTTTGGTGCTGTTGCCAAGATCTT +
Preference number: 5 (lower is better)
Translates to: YLHSSHCPGQSPPAA*RWQSSPLWCCCQDL
Trigger: AAGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGCCATCGCCAAGCTGCTGGGGGAGATTGCCCAGGGCAATGAGAACTATGCAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp CTTGGTCATTCGGATGAAGTCTTCAGGGGTAGAGGTCTTGGCAGGTaGCTCTGGGGAACAGAAGACCGCCAGTTCCTGACGTATGTGCTC +
Preference number: 5 (lower is better)
Translates to: LGHSDEVFRGRGLGR*LWGTEDRQFLTYVL
Trigger: GAGCACATACGTCAGGAACTGGCGGTCTTCTGTTCCCCAGAGCCACCTGCCAAGACCTCTACCCCTGAAGACTTCATCCGAATGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp ACCACCACCGTCTCATTCTCCTGGTCTTCGAAGGCTGCAGCTTTCTaGGCCGCCTTTACCAGGTTATCTGAGGCCCTCTTCACTGCATTG +
Preference number: 5 (lower is better)
Translates to: TTTVSFSWSSKAAAF*AAFTRLSEALFTAL
Trigger: CAATGCAGTGAAGAGGGCCTCAGATAACCTGGTAAAGGCGGCCCAGAAAGCTGCAGCCTTCGAAGACCAGGAGAATGAGACGGTGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGGGCGGCTGCAGCACTaGCCACTGCCTTTGCTAGCT +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGGRLQH*PLPLLA
Trigger: AGCTAGCAAAGGCAGTGGCAAGTGCTGCAGCCGCCC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGATGCTGCAGCAGCTCATaGAGGGCCTGGGTGACAGCC +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGCCSSS*RAWVTA
Trigger: GGCTGTCACCCAGGCCCTCAATGAGCTGCTGCAGCA...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGATTCTGCGCAGCTGCATaGGTGGCCATGCGAAGCCCC +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGFCAAA*VAMRSP
Trigger: GGGGCTTCGCATGGCCACCAATGCAGCTGCGCAGAA...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGGCAGAGGCTGCATGTaGGGCTGCAGCAATGGTCTG +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTGRGCM*GCSNGL
Trigger: CAGACCATTGCTGCAGCCCAACATGCAGCCTCTGCC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGCCATTTGGGACACCTaGTGTCCCAGCTGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTAIWDT*CPSWEA
Trigger: AGCCTCCCAGCTGGGACACAAGGTGTCCCAAATGGC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAGCCACAGCTGCAGGCTaGGCTTGTGAGGCCAGTCGG +
Preference number: 5 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVATAAG*ACEASR
Trigger: CCGACTGGCCTCACAAGCCAAGCCTGCAGCTGTGGC...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGCTGGCTGCACCGAGCTaGACCACATCAGCGAGGCGG +
Preference number: 5 (lower is better)
Translates to: LRYGSINNTLGALILWRGLAAPS*TTSARR
Trigger: CCGCCTCGCTGATGTGGTCAAGCTCGGTGCAGCCAG...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGTATGTGCTCTGTGGTaGCCTCTAGGGCCCGTGTGC +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTVCALW*PLGPVC
Trigger: GCACACGGGCCCTAGAGGCAACCACAGAGCACATAC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCCATCATCCAGTGCATaGGCTGGAATGGCGCCCACC +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTPSSSA*AGMAPT
Trigger: GGTGGGCGCCATTCCAGCCAATGCACTGGATGATGG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGCTGCTTCACACAGATaGTTGGTGGCCGCAGCCACC +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTAASHR*LVAAAT
Trigger: GGTGGCTGCGGCCACCAACAATCTGTGTGAAGCAGC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 90 bp GATGGTCTTGACAAGATTGGCTGTACTGTTGGCCACCTCCTTGGCTaGCTGTACAAACTGGCGCTTGGCAGTGGGATTGGCAGTCCTAGC +
Preference number: 5 (lower is better)
Translates to: DGLDKIGCTVGHLLG*LYKLALGSGIGSPS
Trigger: GCTAGGACTGCCAATCCCACTGCCAAGCGCCAGTTTGTACAGTCAGCCAAGGAGGTGGCCAACAGTACAGCCAATCTTGTCAAGACCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp ACTTGCTTGGCTGAGGAAATGAGTTTCTCCTGGCTAGCATGGCCCTaGACAGCTGCGTTAGCTGCTTCACACAGATTGTTGGTGGCCGCA +
Preference number: 5 (lower is better)
Translates to: TCLAEEMSFSWLAWP*TAALAASHRLLVAA
Trigger: TGCGGCCACCAACAATCTGTGTGAAGCAGCTAACGCAGCTGTCCAGGGCCATGCTAGCCAGGAGAAACTCATTTCCTCAGCCAAGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTTCCAGAGTAAAGCTCTaGGGAGAGGCAGCCCAGCGT +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTSRVKL*GEAAQR
Trigger: ACGCTGGGCTGCCTCTCCCAAGAGCTTTACTCTGGA...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGCCACACTCTTGGCCTaGAGGACCAGGGCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: VESPLLESDLFGFTTLKPATLLA*RTRAAA
Trigger: TGCAGCCGCCCTGGTCCTCAAGGCCAAGAGTGTGGC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGATGGTATCAGTGGCTaGGTCATACCGACCGGCAGG +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTDGISG*VIPTGR
Trigger: CCTGCCGGTCGGTATGACCAAGCCACTGATACCATC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAATCTCCCCCAGCAGCTaGGCGATGGCAGAGCTCACC +
Preference number: 5 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVISPSS*AMAELT
Trigger: GGTGAGCTCTGCCATCGCCAAGCTGCTGGGGGAGAT...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGGGTTCCACCAGTCCTaGCTGTCCAGCTTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTGFHQS*LSSLAV
Trigger: AACAGCCAAGCTGGACAGCAAGGACTGGTGGAACCC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGGCGCCCACCTTTCCTaGAGCCACCAGCTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: VESPLLESDLFGFTTLKPGAHLS*SHQLPL
Trigger: CAGAGGGAGCTGGTGGCTCAAGGAAAGGTGGGCGCC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAGCCCTCTTCACTGCATaGCCAGCAGCCTGGAGCCGT +
Preference number: 5 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVALFTA*PAAWSR
Trigger: ACGGCTCCAGGCTGCTGGCAATGCAGTGAAGAGGGC...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp ATTGCCTGGTTTGCACGGGCAAACTGTGTGGGTTCCACCAGTCCTTaGTGTCCAGCTTGGCTGTTGGGGTCAGAGACACCAACTAGATAT +
Preference number: 5 (lower is better)
Translates to: IAWFARANCVGSTSP*CPAWLLGSETPTRY
Trigger: ATATCTAGTTGGTGTCTCTGACCCCAACAGCCAAGCTGGACAGCAAGGACTGGTGGAACCCACACAGTTTGCCCGTGCAAACCAGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp TTGGCGATGGCAGAGCTCACCGCTTTGGTGCTGTTGCCAAGATCTTaGGTACACTTCTCCATTGTTTCCCCGGGTAAGGGCTTAAGCTTG +
Preference number: 5 (lower is better)
Translates to: LAMAELTALVLLPRS*VHFSIVSPGKGLSL
Trigger: CAAGCTTAAGCCCTTACCCGGGGAAACAATGGAGAAGTGTACCCAAGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGCCATCGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp GCAGCTACTTGCTTGGCTGAGGAAATGAGTTTCTCCTGGCTAGCATaGCCCTGGACAGCTGCGTTAGCTGCTTCACACAGATTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: AATCLAEEMSFSWLA*PWTAALAASHRLLV
Trigger: CACCAACAATCTGTGTGAAGCAGCTAACGCAGCTGTCCAGGGCCATGCTAGCCAGGAGAAACTCATTTCCTCAGCCAAGCAAGTAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGCAGCCCTCCACAGCTTaGGCCACCAGTCGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: KLRYGSINNTLGALILWRQPSTA*ATSRPA
Trigger: GGCTGGGCGACTGGTGGCCAAAGCTGTGGAGGGCTG...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTATCTTCTGTAGCTGCTaGCGAGGCAGACACACAGCC +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTIFCSC*RGRHTA
Trigger: GGCTGTGTGTCTGCCTCGCAAGCAGCTACAGAAGAT...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCCCTCAGCATCGGCCTaGATAGCATTGACCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTPSASA*IALTRS
Trigger: AGACCTGGTCAATGCTATCAAGGCCGATGCTGAGGG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAGCTGTCAGGCTGAGCTaGACTTCCTCGGACACCCTG +
Preference number: 5 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVAVRLS*TSSDTL
Trigger: CAGGGTGTCCGAGGAAGTCAAGCTCAGCCTGACAGC...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCAGTGCCTAGGTTCTTaGCGCACTGACTCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTQCLGS*RTDSAA
Trigger: TGCAGCTGAGTCAGTGCGCAAAGAACCTAGGCACTG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGGTAAGGGCTTAAGCTaGCCATCTCGAGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTGKGLS*PSRAAA
Trigger: AGCAGCAGCTCGAGATGGCAAGCTTAAGCCCTTACC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGCAGAGCTCACCGCTTaGGTGCTGTTGCCAAGATCT +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTAELTA*VLLPRS
Trigger: AGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGATCACTCAGGAGTCGCTaGCTGGCATCTCCAACGGCT +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGSLRSR*LASPTA
Trigger: AGCCGTTGGAGATGCCAGCAAGCGACTCCTGAGTGA...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTTCGGCTCTGTGCTTCTaGAAATGTCCCCGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTSALCF*KCPRAW
Trigger: CCAAGCACGGGGACATTTCAAGAAGCACAGAGCCGA...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAAAGCCACAGAGAGCCTaGGAGGCTGTGGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGKPQRA*EAVAMA
Trigger: TGCCATTGCCACAGCCTCCAAGGCTCTCTGTGGCTT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGGTGTGCAAAGCCTCTaGAGAGATTCCTTCACGGGG +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTGVQSL*RDSFTG
Trigger: CCCCGTGAAGGAATCTCTCAAGAGGCTTTGCACACC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGCACTGGCTGCTTCGTaGAGGGTCGTCGTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: LRYGSINNTLGALILWRGALAAS*RVVVRS
Trigger: AGACCTGACGACGACCCTCAACGAAGCAGCCAGTGC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTTCCTGTCGACAGGAATaGCCAGCAGCAACGGCTTTG +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTSCRQE*PAATAL
Trigger: CAAAGCCGTTGCTGCTGGCAATTCCTGTCGACAGGA...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 90 bp CAGGATCTCCTGCTGTCAGGTTTACCACAGAGGCAGTGCCAGCTGTaGTGGCATCTACCTGGGAGTGGATCTCATGCTTTGATTCATCCA +
Preference number: 5 (lower is better)
Translates to: QDLLLSGLPQRQCQL*WHLPGSGSHALIHP
Trigger: TGGATGAATCAAAGCATGAGATCCACTCCCAGGTAGATGCCATCACAGCTGGCACTGCCTCTGTGGTAAACCTGACAGCAGGAGATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS CCA 90 bp GCAATGGCATCTCCAAACTCCGGCAGATTTCCATTCTTGGCATTTTaGGAGATGCCAGTCATGGCCTCACCTAGGACCTTGGAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: AMASPNSGRFPFLAF*EMPVMASPRTLEFS
Trigger: GGAGAACTCCAAGGTCCTAGGTGAGGCCATGACTGGCATCTCCCAAAATGCCAAGAATGGAAATCTGCCGGAGTTTGGAGATGCCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGAGGCAGCCCAGCGTTaGATGTTGGTGAGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: LRYGSINNTLGALILWRGEAAQR*MLVRLH
Trigger: ATGGAGCCTCACCAACATCAAACGCTGGGCTGCCTC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCAAGGCCCTTTGCTGCTaGCAGAAGGGGCCGGCCATT +
Preference number: 5 (lower is better)
Translates to: VESPLLESDLFGFTTLKPKALCC*QKGPAI
Trigger: AATGGCCGGCCCCTTCTGCAAGCAGCAAAGGGCCTT...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGACAGCAATGGTCTGTGTaGCAGAGGCTGCAGCTTGCT +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGQQWSV*QRLQLA
Trigger: AGCAAGCTGCAGCCTCTGCAACACAGACCATTGCTG...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCATGAGGCTGCTGGCCTaGTCCAGAACGTCGCTGGCT +
Preference number: 5 (lower is better)
Translates to: VESPLLESDLFGFTTLKPMRLLA*SRTSLA
Trigger: AGCCAGCGACGTTCTGGACAAGGCCAGCAGCCTCAT...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTATACCTGAGCAAGCCTTaGCTGGCTTTCTGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVYLSKP*LAFWVP
Trigger: GGGGACCCAGAAAGCCAGCAAAGGCTTGCTCAGGTA...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGAAATGTCCCCGTGCTaGGAGGAAGCGAGTCACTCA +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGEMSPC*EEASHS
Trigger: TGAGTGACTCGCTTCCTCCAAGCACGGGGACATTTC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGACAGGCCATCTGAATaGCCTGGTTTGCACGGGCAA +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGDRPSE*PGLHGQ
Trigger: TTGCCCGTGCAAACCAGGCAATTCAGATGGCCTGTC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGACTGTTGGCCACCTCCTaGGCTGACTGTACAAACTGG +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGLLATS*ADCTNW
Trigger: CCAGTTTGTACAGTCAGCCAAGGAGGTGGCCAACAG...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCCTGGGTGTGTGCTGCTaGCTTGGGGTTACCACCAGC +
Preference number: 5 (lower is better)
Translates to: VESPLLESDLFGFTTLKPLGVCC*LGVTTS
Trigger: GCTGGTGGTAACCCCAAGCAAGCAGCACACACCCAG...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGTGACAGCAATGGCCTaGGCTGTCCTCACCATGGTT +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGVTAMA*AVLTMV
Trigger: AACCATGGTGAGGACAGCCAAGGCCATTGCTGTCAC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCTGCAAGGCACCTGCCTaGGTGACCAGAGCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: VESPLLESDLFGFTTLKPCKAPA*VTRAEQ
Trigger: CTGCTCTGCTCTGGTCACCAAGGCAGGTGCCTTGCA...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGGGTCATCCCCAACTTaGCCCGCTGCAGCCTTCGTA +
Preference number: 5 (lower is better)
Translates to: VESPLLESDLFGFTTLKPGSSPT*PAAAFV
Trigger: TACGAAGGCTGCAGCGGGCAAAGTTGGGGATGACCC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGCCCGTCGGCTCAGATaGGCTGTGGCAATGACATCT +
Preference number: 5 (lower is better)
Translates to: LRYGSINNTLGALILWRGARRLR*AVAMTS
Trigger: AGATGTCATTGCCACAGCCAATCTGAGCCGACGGGC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCTTCACACAGATTGTaGGTGGCCGCAGCCACCATA +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGASHRL*VAAATI
Trigger: TATGGTGGCTGCGGCCACCAACAATCTGTGTGAAGC...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 90 bp GCCAGCAATGAGCTGTGCGATCTGCTCGCCTTCTGTCGTCTGTACTaGGTAGTAGCCATCCTGATAGTCTCCAAAGTCCAGAGTAAAGCT +
Preference number: 5 (lower is better)
Translates to: ASNELCDLLAFCRLY*VVAILIVSKVQSKA
Trigger: AGCTTTACTCTGGACTTTGGAGACTATCAGGATGGCTACTACTCAGTACAGACGACAGAAGGCGAGCAGATCGCACAGCTCATTGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 90 bp GAGGCAGTGCCAGCTGTGATGGCATCTACCTGGGAGTGGATCTCATaGTTTGATTCATCCATCTTGTTCTTACGCCAAGCTTTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: EAVPAVMASTWEWIS*FDSSILFLRQALEA
Trigger: TGCCTCCAAAGCTTGGCGTAAGAACAAGATGGATGAATCAAAGCATGAGATCCACTCCCAGGTAGATGCCATCACAGCTGGCACTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS CCA 90 bp GTGTCCTCCACAAGAACCTTTGCTGTCTTTAAGATACCCTCCCGGTaGTCAGCAAAAGTTTCAGCACCCTCACGGTTAAGTGTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: VSSTRTFAVFKIPSR*SAKVSAPSRLSVPA
Trigger: TGCTGGCACACTTAACCGTGAGGGTGCTGAAACTTTTGCTGACCACCGGGAGGGTATCTTAAAGACAGCAAAGGTTCTTGTGGAGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTATTCTTACGCCAAGCTTaGGAGGCAGCATCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVFLRQA*EAASWP
Trigger: TGGCCAGGATGCTGCCTCCAAAGCTTGGCGTAAGAA...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGAGCTGCAGCAATCACTaGGGTCTGAAGCCCGGAATC +
Preference number: 5 (lower is better)
Translates to: LRYGSINNTLGALILWRGSCSNH*GLKPGI
Trigger: GATTCCGGGCTTCAGACCCAAGTGATTGCTGCAGCT...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACCTGGTCCTGAATTGTaGGCACTGAGGCTTTTGCCG +
Preference number: 5 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVPGPEL*ALRLLP
Trigger: CGGCAAAAGCCTCAGTGCCAACAATTCAGGACCAGG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAACCGCTTTGGTGCTGTaGCCAAGATCTTGGGTACAC +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGTALVL*PRSWVH
Trigger: GTGTACCCAAGATCTTGGCAACAGCACCAAAGCGGT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGATTATCCACGTCTCTTaGGCCAGGCAGGCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: LRYGSINNTLGALILWRGIIHVS*ARQAAD
Trigger: GTCAGCTGCCTGCCTGGCCAAAGAGACGTGGATAAT...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTATGGAAAGCTGCTTCCTaGCAAGCCCGAAGCATGTCC +
Preference number: 5 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVWKAAS*QARSMS
Trigger: GGACATGCTTCGGGCTTGCAAGGAAGCAGCTTTCCA...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGAGGCAGCTACTTGCTaGGCTGAGGAAATGAGTTTC +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTEAATC*AEEMSF
Trigger: GAAACTCATTTCCTCAGCCAAGCAAGTAGCTGCCTC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 90 bp AAGTCCTTCAGGTCAAGGAAGCCAGCCTTGTGCTTCTGTTCATTGTaGGGTCCAAACTGGATCTGGCACTGGAAGCCTGCAAATTCACAG +
Preference number: 5 (lower is better)
Translates to: KSFRSRKPALCFCSL*GPNWIWHWKPANSQ
Trigger: CTGTGAATTTGCAGGCTTCCAGTGCCAGATCCAGTTTGGACCTCACAATGAACAGAAGCACAAGGCTGGCTTCCTTGACCTGAAGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 90 bp AGTGCCAGCTGTGATGGCATCTACCTGGGAGTGGATCTCATGCTTTaGTTCATCCATCTTGTTCTTACGCCAAGCTTTGGAGGCAGCATC +
Preference number: 5 (lower is better)
Translates to: SASCDGIYLGVDLML*FIHLVLTPSFGGSI
Trigger: GATGCTGCCTCCAAAGCTTGGCGTAAGAACAAGATGGATGAATCAAAGCATGAGATCCACTCCCAGGTAGATGCCATCACAGCTGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 90 bp CGCCCATGGTCCAGCCAGTTCAACTCATCGTCTGTGTGCAACTTCTaGTTTAGCTTCTCCATCTTCTTTTCATCTCGCAGTAGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: RPWSSQFNSSSVCNF*FSFSIFFSSRSRVL
Trigger: CAAGACCCTACTGCGAGATGAAAAGAAGATGGAGAAGCTAAAGCAGAAGTTGCACACAGACGATGAGTTGAACTGGCTGGACCATGGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000130353.2
CDS CCA 90 bp GTCAGGTTTACCACAGAGGCAGTGCCAGCTGTGATGGCATCTACCTaGGAGTGGATCTCATGCTTTGATTCATCCATCTTGTTCTTACGC +
Preference number: 5 (lower is better)
Translates to: VRFTTEAVPAVMAST*EWISCFDSSILFLR
Trigger: GCGTAAGAACAAGATGGATGAATCAAAGCATGAGATCCACTCCCAGGTAGATGCCATCACAGCTGGCACTGCCTCTGTGGTAAACCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS-3UTR CAA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTCTCGCAGTAGGGTCTaGTCTTTTCTCAGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: LRYGSINNTLGALILWRGSRSRV*SFLRVP
Trigger: AGGGACCCTGAGAAAAGACAAGACCCTACTGCGAGA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCACTTGCCACTGCCTTaGCTAGCTGCATTAGAACAT +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTHLPLP*LAALEH
Trigger: ATGTTCTAATGCAGCTAGCAAAGGCAGTGGCAAGTG...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTATGCACCAACTTCTTCTaGATGGCGTTCTGCGCAGCT +
Preference number: 5 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVCTNFF*MAFCAA
Trigger: AGCTGCGCAGAACGCCATCAAGAAGAAGTTGGTGCA...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTGCGGCAAGGAGAAGTTaGCTTGAAGACATGGATATG +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTAARRS*LEDMDM
Trigger: CATATCCATGTCTTCAAGCAAACTTCTCCTTGCCGC...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTAAAAGTACTGGGCCATTaGGGACACCTTGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVKVLGH*GHLVSQ
Trigger: CTGGGACACAAGGTGTCCCAAATGGCCCAGTACTTT...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTTGGTCACCATCACCTaGGCAGAGTTCTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LRYGSINNTLGALILWRGLVTIT*AEFLSC
Trigger: GCAGCTCAAGAACTCTGCCAAGGTGATGGTGACCAA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGAGGGCCCGTGTGCCTTaGGTGGCCTCATCTTCCACA +
Preference number: 5 (lower is better)
Translates to: KLRYGSINNTLGALILWRRARVP*VASSST
Trigger: TGTGGAAGATGAGGCCACCAAAGGCACACGGGCCCT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTATCTGAAGGCAAGAACTaGTACTGCTGCTGCCGGATC +
Preference number: 5 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVSEGKN*YCCCRI
Trigger: GATCCGGCAGCAGCAGTACAAGTTCTTGCCTTCAGA...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 90 bp TTTACCACAGAGGCAGTGCCAGCTGTGATGGCATCTACCTGGGAGTaGATCTCATGCTTTGATTCATCCATCTTGTTCTTACGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: FTTEAVPAVMASTWE*ISCFDSSILFLRQA
Trigger: AGCTTGGCGTAAGAACAAGATGGATGAATCAAAGCATGAGATCCACTCCCAGGTAGATGCCATCACAGCTGGCACTGCCTCTGTGGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAAGCCAGATGCCTTTTTaGGGGTCATCATCTGACAGA +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGSQMPF*GSSSDR
Trigger: TCTGTCAGATGATGACCCCAAAAAAGGCATCTGGCT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AGCAGCTGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTAATGCAGATGTGTGTTaGGCTACAATAGTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: SSWGPGRFKLRYGSINNTNADVC*ATIVAA
Trigger: TGCAGCCACTATTGTAGCCAAACACACATCTGCATT...AGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCAGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGCTGGAGAACTCAGGGTaGGAGGCAAAGGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: KLRYGSINNTLGALILWRLENSG*EAKALR
Trigger: CCTGAGTGCCTTTGCCTCCAACCCTGAGTTCTCCAG...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTTACCACCAGCCTCCTaGGCAGTATATAGCAACTGC +
Preference number: 5 (lower is better)
Translates to: LRYGSINNTLGALILWRGLPPAS*AVYSNC
Trigger: GCAGTTGCTATATACTGCCAAGGAGGCTGGTGGTAA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACTTCAGGGCTGGTGTTaGACTTGGTTACCATCTCCT +
Preference number: 5 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVLQGWC*TWLPSP
Trigger: AGGAGATGGTAACCAAGTCAAACACCAGCCCTGAAG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGACCTTGGCAGAGTTCTaGAGCTGCCACACTGCAGGG +
Preference number: 5 (lower is better)
Translates to: KLRYGSINNTLGALILWRTLAEF*SCHTAG
Trigger: CCCTGCAGTGTGGCAGCTCAAGAACTCTGCCAAGGT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGACAGCGGTTCAGGGCTaGGGTCACTGCTTTAGCTAC +
Preference number: 5 (lower is better)
Translates to: KLRYGSINNTLGALILWRTAVQG*GHCFSY
Trigger: GTAGCTAAAGCAGTGACCCAAGCCCTGAACCGCTGT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGATGGTGATGAGCTGGTaGATGCTGTCCGTCACTGCC +
Preference number: 5 (lower is better)
Translates to: KLRYGSINNTLGALILWRMVMSW*MLSVTA
Trigger: GGCAGTGACGGACAGCATCAACCAGCTCATCACCAT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGGGCAGATTTCCATTCTaGGCATTTTGGGAGATGCCA +
Preference number: 5 (lower is better)
Translates to: LRYGSINNTLGALILWRGGRFPF*AFWEMP
Trigger: TGGCATCTCCCAAAATGCCAAGAATGGAAATCTGCC...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGTGTACAAACTGGCGCTaGGCAGTGGGATTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: KLRYGSINNTLGALILWRCTNWR*AVGLAV
Trigger: GACTGCCAATCCCACTGCCAAGCGCCAGTTTGTACA...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCATGGTCTTGACAAGATaGGCTGTACTGTTGGCCACC +
Preference number: 5 (lower is better)
Translates to: VESPLLESDLFGFTTLKPMVLTR*AVLLAT
Trigger: GGTGGCCAACAGTACAGCCAATCTTGTCAAGACCAT...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGAGTGCCTTGATGGTCTaGACAAGATTGGCTGTACTG +
Preference number: 5 (lower is better)
Translates to: LRYGSINNTLGALILWRGSALMV*TRLAVL
Trigger: CAGTACAGCCAATCTTGTCAAGACCATCAAGGCACT...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGTCCCCATCTAGTGCCTaGATGGTCTTGACAAGATTG +
Preference number: 5 (lower is better)
Translates to: LRYGSINNTLGALILWRGSPSSA*MVLTRL
Trigger: CAATCTTGTCAAGACCATCAAGGCACTAGATGGGGA...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAACAGCCTTCACTGTCTaGAGCAATGATGTCACATTG +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGTAFTV*SNDVTL
Trigger: CAATGTGACATCATTGCTCAAGACAGTGAAGGCTGT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGCTTCAGGTCTGGGTTaGGCTTCTGAAGGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: KLRYGSINNTLGALILWRASGLG*ASEGSA
Trigger: TGCTGACCCTTCAGAAGCCAAACCCAGACCTGAAGC...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCATGTCTGTGACGGTCTaGGAGTCATCCACCATGATA +
Preference number: 5 (lower is better)
Translates to: VESPLLESDLFGFTTLKPMSVTV*ESSTMI
Trigger: TATCATGGTGGATGACTCCAAGACCGTCACAGACAT...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACCCTTCATCTTTTCCTaGACTAGGAAGAAGGAGACA +
Preference number: 5 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVPFIFS*TRKKET
Trigger: TGTCTCCTTCTTCCTAGTCAAGGAAAAGATGAAGGG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGTCACTTTCCCCAATTaGCTGCAACAGCTCCCCACT +
Preference number: 5 (lower is better)
Translates to: KLRYGSINNTLGALILWRVTFPN*LQQLPT
Trigger: AGTGGGGAGCTGTTGCAGCAAATTGGGGAAAGTGAC...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp CTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGGGCCTCCACAAGAACCTTaGCTGTCTTTAAGATACCCT +
Preference number: 5 (lower is better)
Translates to: LRYGSINNTLGALILWRGPPQEP*LSLRYP
Trigger: AGGGTATCTTAAAGACAGCAAAGGTTCTTGTGGAGG...CCCCCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCAGCAATGATGTCACATaGGTCACCATCACCTTGGCA +
Preference number: 5 (lower is better)
Translates to: VESPLLESDLFGFTTLKPSNDVT*VTITLA
Trigger: TGCCAAGGTGATGGTGACCAATGTGACATCATTGCT...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGCTGCAGCGATGGACTaGGCAGCTTCTAGGATTTGT +
Preference number: 5 (lower is better)
Translates to: KLRYGSINNTLGALILWRAAAMD*AASRIC
Trigger: ACAAATCCTAGAAGCTGCCAAGTCCATCGCTGCAGC...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGAGGACTGTTGACTTTTaGGGTGACACTGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: KLRYGSINNTLGALILWRRTVDF*GDTESS
Trigger: GGAGGACTCAGTGTCACCCAAAAAGTCAACAGTCCT...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGGGGCCCTGGCAGGTTCAAACTGAGGTACGGCAGCATTAATAATACTCTTGGAAGTGGATCTCATGCTTaGATTCATCCATCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: WGPGRFKLRYGSINNTLGSGSHA*IHPSCS
Trigger: AGAACAAGATGGATGAATCAAAGCATGAGATCCACT...TCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTTGAACCTGCCAGGGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp GTAGAATCACCTTTATTGGAGTCTGACCTGTTTGGGTTTACAACCCTCAAGCCCGCCATAGTAATACCCTaGGTCATTCGGATGAAGTCT +
Preference number: 5 (lower is better)
Translates to: VESPLLESDLFGFTTLKPAIVIP*VIRMKS
Trigger: AGACTTCATCCGAATGACCAAGGGTATTACTATGGC...GGGCTTGAGGGTTGTAAACCCAAACAGGTCAGACTCCAATAAAGGTGATTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTATTTGATTCATCCATCTaGTTCTTACGCCAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVFDSSI*FLRQAL
Trigger: CAAAGCTTGGCGTAAGAACAAGATGGATGAATCAAA...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp AAACTGAGGTACGGCAGCATTAATAATACTCTTGGAGCGTTAATACTCTGGAGGGCTGTTGCCAAGATCTaGGGTACACTTCTCCATTGT +
Preference number: 5 (lower is better)
Translates to: KLRYGSINNTLGALILWRAVAKI*GTLLHC
Trigger: ACAATGGAGAAGTGTACCCAAGATCTTGGCAACAGC...CCTCCAGAGTATTAACGCTCCAAGAGTATTATTAATGCTGCCGTACCTCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS-3UTR CAA 90 bp TGTTTGGGTTTACAACCCTCAAGCCCCATAGGTAGCTGGGTAGGGGATATAGTACTTGTAATAAGTTTCTaGATGGAATCTGAGACAGTC +
Preference number: 5 (lower is better)
Translates to: CLGLQPSSPIGSWVGDIVLVISF*MESETV
Trigger: GACTGTCTCAGATTCCATCAAGAAACTTATTACAAG...TACTATATCCCCTACCCAGCTACCTATGGGGCTTGAGGGTTGTAAACCCAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp GCAGGCCCAGCTCCGGTGGCGTGGGCCTTCACGTGCTaGAGCAGCTCATTGAGGGCCTGGGTGACAGCCGTG +
Preference number: 6 (lower is better)
Translates to: AGPAPVAWAFTC*SSSLRAWVTAV
Trigger: CACGGCTGTCACCCAGGCCCTCAATGAGCTGCTGCAGCACGTGAAGGCCCACGCCACCGGAGCTGGGCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000134623.2
CDS CCA 72 bp CGGCTGCCTGCAGCAGGTTCTGACGGGGCTCAGCGCTaGCGGGCTGAGCACTGCGAAGCAGTTCCGACACAG +
Preference number: 6 (lower is better)
Translates to: RLPAAGSDGAQR*RAEHCEAVPTQ
Trigger: CTGTGTCGGAACTGCTTCGCAGTGCTCAGCCCGCCAGCGCTGAGCCCCGTCAGAACCTGCTGCAGGCAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS CCA 72 bp TGGTCATACCGACCGGCAGGCCCAGCTCCGGTGGCGTaGGCCTTCACGTGCTGCAGCAGCTCATTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: WSYRPAGPAPVA*AFTCCSSSLRA
Trigger: GGCCCTCAATGAGCTGCTGCAGCACGTGAAGGCCCACGCCACCGGAGCTGGGCCTGCCGGTCGGTATGACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000134623.2
CDS GCA 72 bp GGGCTGAGCACTGCGAAGCAGTTCCGACACAGCCCCTaGAAGGCCCTTTGCTGCTTGCAGAAGGGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: GLSTAKQFRHSP*KALCCLQKGPA
Trigger: GGCCGGCCCCTTCTGCAAGCAGCAAAGGGCCTTGCAGGGGCTGTGTCGGAACTGCTTCGCAGTGCTCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS CAA 72 bp CCGGAATCCTCTGTGCGCTGGGCCACACTCTTGGCCTaGAGGACCAGGGCGGCTGCAGCACTTGCCACTGCC +
Preference number: 6 (lower is better)
Translates to: PESSVRWATLLA*RTRAAAALATA
Trigger: GGCAGTGGCAAGTGCTGCAGCCGCCCTGGTCCTCAAGGCCAAGAGTGTGGCCCAGCGCACAGAGGATTCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 72 bp GGCTGTGTCAAGCACAATGGCCTGCACTGCAGGATCTaGTGTCAGCGCAGCCACACCCCGCGCAGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: GCVKHNGLHCRI*CQRSHTPRSLG
Trigger: GCCCAGGCTGCGCGGGGTGTGGCTGCGCTGACATCAGATCCTGCAGTGCAGGCCATTGTGCTTGACACAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp GCGAAGCAGTTCCGACACAGCCCCTGCAAGGCCCTTTaGTGCTTGCAGAAGGGGCCGGCCATTGCCGCCTTC +
Preference number: 6 (lower is better)
Translates to: AKQFRHSPCKAL*CLQKGPAIAAF
Trigger: GAAGGCGGCAATGGCCGGCCCCTTCTGCAAGCAGCAAAGGGCCTTGCAGGGGCTGTGTCGGAACTGCTTCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 72 bp ATGCGAAGCCCCTCAGCTGCTTCACGCAGTCGCTGCTaGTGTTCCTCACTGTCAGGGTGGGCGGCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: MRSPSAASRSRC*CSSLSGWAAAP
Trigger: GGGAGCAGCCGCCCACCCTGACAGTGAGGAACAGCAGCAGCGACTGCGTGAAGCAGCTGAGGGGCTTCGCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp GCCATGCGAAGCCCCTCAGCTGCTTCACGCAGTCGCTaGTGCTGTTCCTCACTGTCAGGGTGGGCGGCTGCT +
Preference number: 6 (lower is better)
Translates to: AMRSPSAASRSR*CCSSLSGWAAA
Trigger: AGCAGCCGCCCACCCTGACAGTGAGGAACAGCAGCAGCGACTGCGTGAAGCAGCTGAGGGGCTTCGCATGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp AAGTACTGGGCCATTTGGGACACCTTGTGTCCCAGCTaGGAGGCTTCAGCCCGAGCAGCGCTGGCCAGCGGC +
Preference number: 6 (lower is better)
Translates to: KYWAIWDTLCPS*EASARAALASG
Trigger: GCCGCTGGCCAGCGCTGCTCGGGCTGAAGCCTCCCAGCTGGGACACAAGGTGTCCCAAATGGCCCAGTACTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp ACTGCGAAGCAGTTCCGACACAGCCCCTGCAAGGCCCTTTGCTGCTaGCAGAAGGGGCCGGCCATTGCCGCCTTCATCCTCCAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: TAKQFRHSPCKALCC*QKGPAIAAFILQQG
Trigger: GCCCTGCTGGAGGATGAAGGCGGCAATGGCCGGCCCCTTCTGCAAGCAGCAAAGGGCCTTGCAGGGGCTGTGTCGGAACTGCTTCGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS TCA 72 bp TCCTGTCCAAATCGGCCGGAGGCCCGAGCCAGGTCCTaGGGAGTTCCTCGGGAGGCTTGCACCAGTTCTGTG +
Preference number: 6 (lower is better)
Translates to: SCPNRPEARARS*GVPREACTSSV
Trigger: CACAGAACTGGTGCAAGCCTCCCGAGGAACTCCTCAGGACCTGGCTCGGGCCTCCGGCCGATTTGGACAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 72 bp ATGCTGTCCGTCACTGCCCGGGCAGCCGCAGCCAGCTaGCTCTTGAGGTTGGGAGAAGCAGGGTCTGTGGAC +
Preference number: 6 (lower is better)
Translates to: MLSVTARAAAAS*LLRLGEAGSVD
Trigger: GTCCACAGACCCTGCTTCTCCCAACCTCAAGAGTCAGCTGGCTGCGGCTGCCCGGGCAGTGACGGACAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp AGTTCCGACACAGCCCCTGCAAGGCCCTTTGCTGCTTaGAGAAGGGGCCGGCCATTGCCGCCTTCATCCTCC +
Preference number: 6 (lower is better)
Translates to: SSDTAPARPFAA*RRGRPLPPSSS
Trigger: GGAGGATGAAGGCGGCAATGGCCGGCCCCTTCTGCAAGCAGCAAAGGGCCTTGCAGGGGCTGTGTCGGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 72 bp CTGCCACACTGCAGGGTCATCCCCAACTTTGCCCGCTaGAGCCTTCGTAGCGCTGATGAGGTCACCCAGGGC +
Preference number: 6 (lower is better)
Translates to: LPHCRVIPNFAR*SLRSADEVTQG
Trigger: GCCCTGGGTGACCTCATCAGCGCTACGAAGGCTGCAGCGGGCAAAGTTGGGGATGACCCTGCAGTGTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp TTTGGCCCTGGGCTTCAGCTGCTCCAGCTTCTTGGCTaGAGCCTCGATGGCGGCTGCGGCTCCCAAGAGTTC +
Preference number: 6 (lower is better)
Translates to: FGPGLQLLQLLG*SLDGGCGSQEF
Trigger: GAACTCTTGGGAGCCGCAGCCGCCATCGAGGCTGCAGCCAAGAAGCTGGAGCAGCTGAAGCCCAGGGCCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp GCCGCAGCCACCATACGGGCAGCGGAAATGAGGCCCTaGGACCACTGCCCATCATCCAGTGCATTGGCTGGA +
Preference number: 6 (lower is better)
Translates to: AAATIRAAEMRP*DHCPSSSALAG
Trigger: TCCAGCCAATGCACTGGATGATGGGCAGTGGTCGCAGGGCCTCATTTCCGCTGCCCGTATGGTGGCTGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp TCTGCCACGGCCTTACAGCTCTGCACCAGTAGGGGCTaGGGGCCCGCAGAGGCCTTGATAGCATTGACCAGG +
Preference number: 6 (lower is better)
Translates to: SATALQLCTSRG*GPAEALIALTR
Trigger: CCTGGTCAATGCTATCAAGGCCTCTGCGGGCCCCCAGCCCCTACTGGTGCAGAGCTGTAAGGCCGTGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134623.2
CDS CAA 72 bp CAGTTCCGACACAGCCCCTGCAAGGCCCTTTGCTGCTaGCAGAAGGGGCCGGCCATTGCCGCCTTCATCCTC +
Preference number: 6 (lower is better)
Translates to: QFRHSPCKALCC*QKGPAIAAFIL
Trigger: GAGGATGAAGGCGGCAATGGCCGGCCCCTTCTGCAAGCAGCAAAGGGCCTTGCAGGGGCTGTGTCGGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS CAA 72 bp TGCGAAGCAGTTCCGACACAGCCCCTGCAAGGCCCTTaGCTGCTTGCAGAAGGGGCCGGCCATTGCCGCCTT +
Preference number: 6 (lower is better)
Translates to: CEAVPTQPLQGP*LLAEGAGHCRL
Trigger: AAGGCGGCAATGGCCGGCCCCTTCTGCAAGCAGCAAAGGGCCTTGCAGGGGCTGTGTCGGAACTGCTTCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS CAA 90 bp GCTGAGCACTGCGAAGCAGTTCCGACACAGCCCCTGCAAGGCCCTTaGCTGCTTGCAGAAGGGGCCGGCCATTGCCGCCTTCATCCTCCA +
Preference number: 6 (lower is better)
Translates to: AEHCEAVPTQPLQGP*LLAEGAGHCRLHPP
Trigger: TGGAGGATGAAGGCGGCAATGGCCGGCCCCTTCTGCAAGCAGCAAAGGGCCTTGCAGGGGCTGTGTCGGAACTGCTTCGCAGTGCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS TCA 72 bp GGAGCAAGCTGCTGGCTGACAGCGGCAAGCGAAGCCTaGTCTAGGTCCCGCAAGCAGCTGTTCAGAGCCGCA +
Preference number: 6 (lower is better)
Translates to: GASCWLTAASEA*SRSRKQLFRAA
Trigger: TGCGGCTCTGAACAGCTGCTTGCGGGACCTAGATCAGGCTTCGCTTGCCGCTGTCAGCCAGCAGCTTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp CAAGGCCCTTTGCTGCTTGCAGAAGGGGCCGGCCATTaGCGCCTTCATCCTCCAGCAGGGCAGCCAATAGCT +
Preference number: 6 (lower is better)
Translates to: QGPLLLAEGAGH*RLHPPAGQPIA
Trigger: AGCTATTGGCTGCCCTGCTGGAGGATGAAGGCGGCAATGGCCGGCCCCTTCTGCAAGCAGCAAAGGGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 72 bp CAGCAGCTCATTGAGGGCCTGGGTGACAGCCGTGGCTaGTGCTCCTACCCCTCGAAGCAGCTGTCCATCTTC +
Preference number: 6 (lower is better)
Translates to: QQLIEGLGDSRG*CSYPSKQLSIF
Trigger: GAAGATGGACAGCTGCTTCGAGGGGTAGGAGCAGCAGCCACGGCTGTCACCCAGGCCCTCAATGAGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp CGCAGCTGCATTGGTGGCCATGCGAAGCCCCTCAGCTaGTTCACGCAGTCGCTGCTGCTGTTCCTCACTGTC +
Preference number: 6 (lower is better)
Translates to: RSCIGGHAKPLS*FTQSLLLFLTV
Trigger: GACAGTGAGGAACAGCAGCAGCGACTGCGTGAAGCAGCTGAGGGGCTTCGCATGGCCACCAATGCAGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp ACCATACGGGCAGCGGAAATGAGGCCCTGCGACCACTaGCCATCATCCAGTGCATTGGCTGGAATGGCGCCC +
Preference number: 6 (lower is better)
Translates to: TIRAAEMRPCDH*PSSSALAGMAP
Trigger: GGGCGCCATTCCAGCCAATGCACTGGATGATGGGCAGTGGTCGCAGGGCCTCATTTCCGCTGCCCGTATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp GCCACGGAGGACTGGGCGGCTTGTGCCAACTTCTCCTaGCTCCCAGCTGCATTCTGCACTAGGACCTTGGTG +
Preference number: 6 (lower is better)
Translates to: ATEDWAACANFS*LPAAFCTRTLV
Trigger: CACCAAGGTCCTAGTGCAGAATGCAGCTGGGAGCCAGGAGAAGTTGGCACAAGCCGCCCAGTCCTCCGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp TCAGCAGCACGTGGTCCAGCAGTTCCAGGTAACCATTaGCACACTCCCGGCCATAGTGCAGGGCTCGGAGCC +
Preference number: 6 (lower is better)
Translates to: SAARGPAVPGNH*HTPGHSAGLGA
Trigger: GGCTCCGAGCCCTGCACTATGGCCGGGAGTGTGCCAATGGTTACCTGGAACTGCTGGACCACGTGCTGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp AGGCGCTGCACCAACTTCTTCTTGATGGCGTTCTGCGCAGCTGCATaGGTGGCCATGCGAAGCCCCTCAGCTGCTTCACGCAGTCGCTGC +
Preference number: 6 (lower is better)
Translates to: RRCTNFFLMAFCAAA*VAMRSPSAASRSRC
Trigger: GCAGCGACTGCGTGAAGCAGCTGAGGGGCTTCGCATGGCCACCAATGCAGCTGCGCAGAACGCCATCAAGAAGAAGTTGGTGCAGCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp GGCAGCAATGAGGGCGAGCTGAGCACTAGGGCTGTCAGGCTGAGCTaGACTTCCTCGGACACCCTGCACCAGCAACGGAATCTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: GSNEGELSTRAVRLS*TSSDTLHQQRNLLC
Trigger: GCAGAGCAGATTCCGTTGCTGGTGCAGGGTGTCCGAGGAAGTCAAGCTCAGCCTGACAGCCCTAGTGCTCAGCTCGCCCTCATTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000134623.2
CDS CAA 90 bp GCGGCAAGGAGAAGTTTGCTTGAAGACATGGATATGCCCTTCAGGTaGGACACCACCTGGGCTCGGTCCTCCTGGCTCGGGGCCTGTCCG +
Preference number: 6 (lower is better)
Translates to: AARRSLLEDMDMPFR*DTTWARSSWLGACP
Trigger: CGGACAGGCCCCGAGCCAGGAGGACCGAGCCCAGGTGGTGTCCAACCTGAAGGGCATATCCATGTCTTCAAGCAAACTTCTCCTTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp TTGGCAGAGTTCTTGAGCTGCCACACTGCAGGGTCATCCCCAACTTaGCCCGCTGCAGCCTTCGTAGCGCTGATGAGGTCACCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: LAEFLSCHTAGSSPT*PAAAFVALMRSPRA
Trigger: GGCCCTGGGTGACCTCATCAGCGCTACGAAGGCTGCAGCGGGCAAAGTTGGGGATGACCCTGCAGTGTGGCAGCTCAAGAACTCTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp CTAGCATGGCCCTGGACAGCTGCGTTAGCTGCTTCACACAGATTGTaGGTGGCCGCAGCCACCATACGGGCAGCGGAAATGAGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: LAWPWTAALAASHRL*VAAATIRAAEMRPC
Trigger: GCAGGGCCTCATTTCCGCTGCCCGTATGGTGGCTGCGGCCACCAACAATCTGTGTGAAGCAGCTAACGCAGCTGTCCAGGGCCATGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp TGGCTAGCATGGCCCTGGACAGCTGCGTTAGCTGCTTCACACAGATaGTTGGTGGCCGCAGCCACCATACGGGCAGCGGAAATGAGGCCC +
Preference number: 6 (lower is better)
Translates to: WLAWPWTAALAASHR*LVAAATIRAAEMRP
Trigger: GGGCCTCATTTCCGCTGCCCGTATGGTGGCTGCGGCCACCAACAATCTGTGTGAAGCAGCTAACGCAGCTGTCCAGGGCCATGCTAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 72 bp TGCCGCCAACGACTCCTGCAGCACTGGCTGCTTCGTTaGGGGTCGTCGTCAGGTCTTCTACGGCCTCTGTCA +
Preference number: 6 (lower is better)
Translates to: CRQRLLQHWLLR*GSSSGLLRPLS
Trigger: TGACAGAGGCCGTAGAAGACCTGACGACGACCCTCAACGAAGCAGCCAGTGCTGCAGGAGTCGTTGGCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp CAGCTCATTGAGGGCCTGGGTGACAGCCGTGGCTGCTaGTCCTACCCCTCGAAGCAGCTGTCCATCTTCTGT +
Preference number: 6 (lower is better)
Translates to: QLIEGLGDSRGC*SYPSKQLSIFC
Trigger: ACAGAAGATGGACAGCTGCTTCGAGGGGTAGGAGCAGCAGCCACGGCTGTCACCCAGGCCCTCAATGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp AAGGTCCACATGCCTCCTGAGCCTTCTGAGCAGCAGTaGGCAGCTCGGCCAGGGCAGTGCCTAGGTTCTTTG +
Preference number: 6 (lower is better)
Translates to: KVHMPPEPSEQQ*AARPGQCLGSL
Trigger: CAAAGAACCTAGGCACTGCCCTGGCCGAGCTGCGCACTGCTGCTCAGAAGGCTCAGGAGGCATGTGGACCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp GCAGGCCCAGCTCCGGTGGCGTGGGCCTTTGCTAGCTaGATTAGAACATCCTGGAAGTGGGGGTCAGTGTCA +
Preference number: 6 (lower is better)
Translates to: AGPAPVAWAFAS*IRTSWKWGSVS
Trigger: TGACACTGACCCCCACTTCCAGGATGTTCTAATGCAGCTAGCAAAGGCCCACGCCACCGGAGCTGGGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000125509.2
CDS CCA 72 bp GTGATCTGCTGCTGGGCAGGTGGCATGCTCCCCACCTaGAAATTCTCAGGACCAGAGGCTCCAGAGCGCATG +
Preference number: 6 (lower is better)
Translates to: VICCWAGGMLPT*KFSGPEAPERM
Trigger: CATGCGCTCTGGAGCCTCTGGTCCTGAGAATTTCCAGGTGGGGAGCATGCCACCTGCCCAGCAGCAGATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp AGGGCTCGGAGCCGTACATCAGGCGCCACTTCTGGGTaGAAAGCTGCTTCCTTGCAAGCCCGAAGCATGTCC +
Preference number: 6 (lower is better)
Translates to: RARSRTSGATSG*KAASLQARSMS
Trigger: GGACATGCTTCGGGCTTGCAAGGAAGCAGCTTTCCACCCAGAAGTGGCGCCTGATGTACGGCTCCGAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp GTGCAGGGCTCGGAGCCGTACATCAGGCGCCACTTCTaGGTGGAAAGCTGCTTCCTTGCAAGCCCGAAGCAT +
Preference number: 6 (lower is better)
Translates to: VQGSEPYIRRHF*VESCFLASPKH
Trigger: ATGCTTCGGGCTTGCAAGGAAGCAGCTTTCCACCCAGAAGTGGCGCCTGATGTACGGCTCCGAGCCCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp TGGTCATACCGACCGGCAGGCCCAGCTCCGGTGGCGTaGGCCTTTGCTAGCTGCATTAGAACATCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: WSYRPAGPAPVA*AFASCIRTSWK
Trigger: CTTCCAGGATGTTCTAATGCAGCTAGCAAAGGCCCACGCCACCGGAGCTGGGCCTGCCGGTCGGTATGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125509.2
CDS CCA 72 bp TGGCTTGGTCATACCGACCGGCAGGCCCAGCTCCGGTaGCGTGGGCCTTTGCTAGCTGCATTAGAACATCCT +
Preference number: 6 (lower is better)
Translates to: WLGHTDRQAQLR*RGPLLAALEHP
Trigger: AGGATGTTCTAATGCAGCTAGCAAAGGCCCACGCCACCGGAGCTGGGCCTGCCGGTCGGTATGACCAAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125509.2
CDS CAA 72 bp GAGGGCGAGCTGAGCACTAGGGCTGTCAGGCTGAGCTaGACTTCCTCGGACACCCTGCACCAGCAACGGAAT +
Preference number: 6 (lower is better)
Translates to: EGELSTRAVRLS*TSSDTLHQQRN
Trigger: ATTCCGTTGCTGGTGCAGGGTGTCCGAGGAAGTCAAGCTCAGCCTGACAGCCCTAGTGCTCAGCTCGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000134623.2
CDS CAA 72 bp ATGCCGCCAACGACTCCTGCAGCACTGGCTGCTTCGTaGAGGGTCGTCGTCAGGTCTTCTACGGCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: MPPTTPAALAAS*RVVVRSSTASV
Trigger: GACAGAGGCCGTAGAAGACCTGACGACGACCCTCAACGAAGCAGCCAGTGCTGCAGGAGTCGTTGGCGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp TGGCCCTGGACAGCTGCGTTAGCTGCTTCACACAGATaGTTGGTGGCCGCAGCCACCATACGGGCAGCGGAA +
Preference number: 6 (lower is better)
Translates to: WPWTAALAASHR*LVAAATIRAAE
Trigger: TTCCGCTGCCCGTATGGTGGCTGCGGCCACCAACAATCTGTGTGAAGCAGCTAACGCAGCTGTCCAGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp TGCTGCTCCTACCCCTCGAAGCAGCTGTCCATCTTCTGTAGCTGCTaGCGAGGCAGACACACAGCCCTCCACAGCTTTGGCCACCAGTCG +
Preference number: 6 (lower is better)
Translates to: CCSYPSKQLSIFCSC*RGRHTALHSFGHQS
Trigger: CGACTGGTGGCCAAAGCTGTGGAGGGCTGTGTGTCTGCCTCGCAAGCAGCTACAGAAGATGGACAGCTGCTTCGAGGGGTAGGAGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 72 bp CTTGAGAGATTCCTTCACGGGGAGCAAGCTGCTGGCTaGCAGCGGCAAGCGAAGCCTGATCTAGGTCCCGCA +
Preference number: 6 (lower is better)
Translates to: LERFLHGEQAAG*QRQAKPDLGPA
Trigger: TGCGGGACCTAGATCAGGCTTCGCTTGCCGCTGTCAGCCAGCAGCTTGCTCCCCGTGAAGGAATCTCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 72 bp GGCTGCAGCTTTCTGGGCCGCCTTTACCAGGTTATCTaGGGCCCTCTTCACTGCATTGCCAGCAGCCTGGAG +
Preference number: 6 (lower is better)
Translates to: GCSFLGRLYQVI*GPLHCIASSLE
Trigger: CTCCAGGCTGCTGGCAATGCAGTGAAGAGGGCCTCAGATAACCTGGTAAAGGCGGCCCAGAAAGCTGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp GCCTGCATGCTGGAGTTAATGGTTCCAGTGAGCGCCTaGTGGGCTGAAGTCAGAGGTGGCATGTGTCCTCGG +
Preference number: 6 (lower is better)
Translates to: ACMLELMVPVSA*WAEVRGGMCPR
Trigger: CCGAGGACACATGCCACCTCTGACTTCAGCCCAGCAGGCGCTCACTGGAACCATTAACTCCAGCATGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp AAGTCATCCAGAGTGGCCTGGGCAGCCTGCACAGCCTaGATGCTGGAGTTAATGGTTCCAGTGAGCGCCTGC +
Preference number: 6 (lower is better)
Translates to: KSSRVAWAACTA*MLELMVPVSAC
Trigger: GCAGGCGCTCACTGGAACCATTAACTCCAGCATGCAGGCTGTGCAGGCTGCCCAGGCCACTCTGGATGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 72 bp CTGTGGGTGGCTCAGGGTCTTAGACGCAGCACCCACTaGAGCCAGGGTGAGTGGTTCAAAGTACTGGGCCAT +
Preference number: 6 (lower is better)
Translates to: LWVAQGLRRSTH*SQGEWFKVLGH
Trigger: ATGGCCCAGTACTTTGAACCACTCACCCTGGCTGCAGTGGGTGCTGCGTCTAAGACCCTGAGCCACCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp GTGCATCTGGCCACTGGTGATCTGCTGCTGGGCAGGTaGCATGCTCCCCACCTGGAAATTCTCAGGACCAGA +
Preference number: 6 (lower is better)
Translates to: VHLATGDLLLGR*HAPHLEILRTR
Trigger: TCTGGTCCTGAGAATTTCCAGGTGGGGAGCATGCCACCTGCCCAGCAGCAGATCACCAGTGGCCAGATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp CATTGCCCTGGGCAATCTCCCCCAGCAGCTTGGCGATaGCAGAGCTCACCGCTTTGGTGCTGTTGCCAAGAT +
Preference number: 6 (lower is better)
Translates to: HCPGQSPPAAWR*QSSPLWCCCQD
Trigger: ATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGCCATCGCCAAGCTGCTGGGGGAGATTGCCCAGGGCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp AGTTCTCATTGCCCTGGGCAATCTCCCCCAGCAGCTTaGCGATGGCAGAGCTCACCGCTTTGGTGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: SSHCPGQSPPAA*RWQSSPLWCCC
Trigger: GCAACAGCACCAAAGCGGTGAGCTCTGCCATCGCCAAGCTGCTGGGGGAGATTGCCCAGGGCAATGAGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp TCTCCAACGGCTCGTAGGGCATTATCCACGTCTCTTTaGCCAGGCAGGCAGCTGACACAGCGGTTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: SPTARRALSTSL*PGRQLTQRFRA
Trigger: AGCCCTGAACCGCTGTGTCAGCTGCCTGCCTGGCCAAAGAGACGTGGATAATGCCCTACGAGCCGTTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp GATCTAGGTCCCGCAAGCAGCTGTTCAGAGCCGCAATaGCTGTCTCACACTCCAGCTGCCCTGGGGCTTTGT +
Preference number: 6 (lower is better)
Translates to: DLGPASSCSEPQ*LSHTPAALGLC
Trigger: ACAAAGCCCCAGGGCAGCTGGAGTGTGAGACAGCCATTGCGGCTCTGAACAGCTGCTTGCGGGACCTAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp GCACCCACTGCAGCCAGGGTGAGTGGTTCAAAGTACTaGGCCATTTGGGACACCTTGTGTCCCAGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: APTAARVSGSKY*AIWDTLCPSWE
Trigger: CTCCCAGCTGGGACACAAGGTGTCCCAAATGGCCCAGTACTTTGAACCACTCACCCTGGCTGCAGTGGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp GTGAGGCCAGTCGGCCATAGTCACTGGTCAGCTGGTTaGCAAGAGGGCCTAGCTCTTCAGGGCTGGTGTTTG +
Preference number: 6 (lower is better)
Translates to: VRPVGHSHWSAG*QEGLALQGWCL
Trigger: CAAACACCAGCCCTGAAGAGCTAGGCCCTCTTGCCAACCAGCTGACCAGTGACTATGGCCGACTGGCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp CAGGCTTGGCTTGTGAGGCCAGTCGGCCATAGTCACTaGTCAGCTGGTTGGCAAGAGGGCCTAGCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: QAWLVRPVGHSH*SAGWQEGLALQ
Trigger: CTGAAGAGCTAGGCCCTCTTGCCAACCAGCTGACCAGTGACTATGGCCGACTGGCCTCACAAGCCAAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp CCCGTGCTTGGAGGAAGCGAGTCACTCAGGAGTCGCTaGCTGGCATCTCCAACGGCTCGTAGGGCATTATCC +
Preference number: 6 (lower is better)
Translates to: PVLGGSESLRSR*LASPTARRALS
Trigger: GGATAATGCCCTACGAGCCGTTGGAGATGCCAGCAAGCGACTCCTGAGTGACTCGCTTCCTCCAAGCACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp CCCTGGACAGCTGCGTTAGCTGCTTCACACAGATTGTaGGTGGCCGCAGCCACCATACGGGCAGCGGAAATG +
Preference number: 6 (lower is better)
Translates to: PWTAALAASHRL*VAAATIRAAEM
Trigger: CATTTCCGCTGCCCGTATGGTGGCTGCGGCCACCAACAATCTGTGTGAAGCAGCTAACGCAGCTGTCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp TCTTCTGTAGCTGCTTGCGAGGCAGACACACAGCCCTCCACAGCTTaGGCCACCAGTCGCCCAGCCTCGACTAGCTGTTCTTGGCACACA +
Preference number: 6 (lower is better)
Translates to: SSVAACEADTQPSTA*ATSRPASTSCSWHT
Trigger: TGTGTGCCAAGAACAGCTAGTCGAGGCTGGGCGACTGGTGGCCAAAGCTGTGGAGGGCTGTGTGTCTGCCTCGCAAGCAGCTACAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp CCCTTGGCCGCCTCCACCATCTTGGCGGTGGCATCAGCGAGGATCTaGGCAGCACTCAGGAGCTTTCTAGAGTTCTCCAGATCACTCTCC +
Preference number: 6 (lower is better)
Translates to: PLAASTILAVASARI*AALRSFLEFSRSLS
Trigger: GGAGAGTGATCTGGAGAACTCTAGAAAGCTCCTGAGTGCTGCCAAGATCCTCGCTGATGCCACCGCCAAGATGGTGGAGGCGGCCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp CACGTCTCTTTGGCCAGGCAGGCAGCTGACACAGCGGTTCAGGGCTaGGGTCACTGCTTTAGCTACCTGAGCAAGCCTTTGCTGGCTTTC +
Preference number: 6 (lower is better)
Translates to: HVSLARQAADTAVQG*GHCFSYLSKPLLAF
Trigger: GAAAGCCAGCAAAGGCTTGCTCAGGTAGCTAAAGCAGTGACCCAAGCCCTGAACCGCTGTGTCAGCTGCCTGCCTGGCCAAAGAGACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp AGATATGCTGCCTGTGCGGCTGCCTCCGTGAAGCCACAGAGAGCCTaGGAGGCTGTGGCAATGGCATCTCCAAACTCCGGCAGATTTCCA +
Preference number: 6 (lower is better)
Translates to: RYAACAAASVKPQRA*EAVAMASPNSGRFP
Trigger: TGGAAATCTGCCGGAGTTTGGAGATGCCATTGCCACAGCCTCCAAGGCTCTCTGTGGCTTCACGGAGGCAGCCGCACAGGCAGCATATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp GCAAACTGTGTGGGTTCCACCAGTCCTTGCTGTCCAGCTTGGCTGTaGGGGTCAGAGACACCAACTAGATATGCTGCCTGTGCGGCTGCC +
Preference number: 6 (lower is better)
Translates to: ANCVGSTSPCCPAWL*GSETPTRYAACAAA
Trigger: GGCAGCCGCACAGGCAGCATATCTAGTTGGTGTCTCTGACCCCAACAGCCAAGCTGGACAGCAAGGACTGGTGGAACCCACACAGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp CTGCACCAACTTCTTCTTGATGGCGTTCTGCGCAGCTaGATTGGTGGCCATGCGAAGCCCCTCAGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LHQLLLDGVLRS*IGGHAKPLSCF
Trigger: GAAGCAGCTGAGGGGCTTCGCATGGCCACCAATGCAGCTGCGCAGAACGCCATCAAGAAGAAGTTGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp CCGTGCTTGGAGGAAGCGAGTCACTCAGGAGTCGCTTaGTGGCATCTCCAACGGCTCGTAGGGCATTATCCA +
Preference number: 6 (lower is better)
Translates to: PCLEEASHSGVA*WHLQRLVGHYP
Trigger: TGGATAATGCCCTACGAGCCGTTGGAGATGCCAGCAAGCGACTCCTGAGTGACTCGCTTCCTCCAAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp CACCATCACCTTGGCAGAGTTCTTGAGCTGCCACACTaGAGGGTCATCCCCAACTTTGCCCGCTGCAGCCTT +
Preference number: 6 (lower is better)
Translates to: HHHLGRVLELPH*RVIPNFARCSL
Trigger: AAGGCTGCAGCGGGCAAAGTTGGGGATGACCCTGCAGTGTGGCAGCTCAAGAACTCTGCCAAGGTGATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp TGCATGCTGGAGTTAATGGTTCCAGTGAGCGCCTGCTaGGCTGAAGTCAGAGGTGGCATGTGTCCTCGGTGC +
Preference number: 6 (lower is better)
Translates to: CMLELMVPVSAC*AEVRGGMCPRC
Trigger: GCACCGAGGACACATGCCACCTCTGACTTCAGCCCAGCAGGCGCTCACTGGAACCATTAACTCCAGCATGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp TTGGCCACCAGTCGCCCAGCCTCGACTAGCTGTTCTTaGCACACAGGTGAGCTGATTGTAGGTGCTACCACC +
Preference number: 6 (lower is better)
Translates to: LATSRPASTSCS*HTGELIVGATT
Trigger: GGTGGTAGCACCTACAATCAGCTCACCTGTGTGCCAAGAACAGCTAGTCGAGGCTGGGCGACTGGTGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp CCCCCAGCAGCTTGGCGATGGCAGAGCTCACCGCTTTaGTGCTGTTGCCAAGATCTTGGGTACACTTCTCCA +
Preference number: 6 (lower is better)
Translates to: PPAAWRWQSSPL*CCCQDLGYTSP
Trigger: TGGAGAAGTGTACCCAAGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGCCATCGCCAAGCTGCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp CCTTGTCCAGAACGTCGCTGGCTGTGTCAAGCACAATaGCCTGCACTGCAGGATCTGATGTCAGCGCAGCCA +
Preference number: 6 (lower is better)
Translates to: PCPERRWLCQAQ*PALQDLMSAQP
Trigger: TGGCTGCGCTGACATCAGATCCTGCAGTGCAGGCCATTGTGCTTGACACAGCCAGCGACGTTCTGGACAAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp GTTTTAGTCTGGTCCAGAAGTGCCATCTGCTGTGGGTaGCTCAGGGTCTTAGACGCAGCACCCACTGCAGCC +
Preference number: 6 (lower is better)
Translates to: VLVWSRSAICCG*LRVLDAAPTAA
Trigger: GGCTGCAGTGGGTGCTGCGTCTAAGACCCTGAGCCACCCACAGCAGATGGCACTTCTGGACCAGACTAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp AGTGGACAGAGCACATTGCGTAGCTGCAGCAATCACTaGGGTCTGAAGCCCGGAATCCTCTGTGCGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SGQSTLRSCSNH*GLKPGILCALG
Trigger: GCCCAGCGCACAGAGGATTCCGGGCTTCAGACCCAAGTGATTGCTGCAGCTACGCAATGTGCTCTGTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp GGTACAGGCCACCAGCTGGGAAGTGGACAGAGCACATaGCGTAGCTGCAGCAATCACTTGGGTCTGAAGCCC +
Preference number: 6 (lower is better)
Translates to: GTGHQLGSGQST*RSCSNHLGLKP
Trigger: GGGCTTCAGACCCAAGTGATTGCTGCAGCTACGCAATGTGCTCTGTCCACTTCCCAGCTGGTGGCCTGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp TACCCCTCGAAGCAGCTGTCCATCTTCTGTAGCTGCTaGCGAGGCAGACACACAGCCCTCCACAGCTTTGGC +
Preference number: 6 (lower is better)
Translates to: YPSKQLSIFCSC*RGRHTALHSFG
Trigger: GCCAAAGCTGTGGAGGGCTGTGTGTCTGCCTCGCAAGCAGCTACAGAAGATGGACAGCTGCTTCGAGGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp ACCAACTTCTTCTTGATGGCGTTCTGCGCAGCTGCATaGGTGGCCATGCGAAGCCCCTCAGCTGCTTCACGC +
Preference number: 6 (lower is better)
Translates to: TNFFLMAFCAAA*VAMRSPSAASR
Trigger: GCGTGAAGCAGCTGAGGGGCTTCGCATGGCCACCAATGCAGCTGCGCAGAACGCCATCAAGAAGAAGTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp TCCCCCAGCAGCTTGGCGATGGCAGAGCTCACCGCTTaGGTGCTGTTGCCAAGATCTTGGGTACACTTCTCC +
Preference number: 6 (lower is better)
Translates to: SPSSLAMAELTA*VLLPRSWVHFS
Trigger: GGAGAAGTGTACCCAAGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGCCATCGCCAAGCTGCTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp GGCTTGGGTCACTGCTTTAGCTACCTGAGCAAGCCTTaGCTGGCTTTCTGGGTCCCCTGGGTGTCCAGATGC +
Preference number: 6 (lower is better)
Translates to: GLGHCFSYLSKP*LAFWVPWVSRC
Trigger: GCATCTGGACACCCAGGGGACCCAGAAAGCCAGCAAAGGCTTGCTCAGGTAGCTAAAGCAGTGACCCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp TTGGCCAGGCAGGCAGCTGACACAGCGGTTCAGGGCTaGGGTCACTGCTTTAGCTACCTGAGCAAGCCTTTG +
Preference number: 6 (lower is better)
Translates to: LARQAADTAVQG*GHCFSYLSKPL
Trigger: CAAAGGCTTGCTCAGGTAGCTAAAGCAGTGACCCAAGCCCTGAACCGCTGTGTCAGCTGCCTGCCTGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp GCAGCCTTCGTAGCGCTGATGAGGTCACCCAGGGCCTaGGCTACGTCCTTTACTGCATTGATCAGCACCACC +
Preference number: 6 (lower is better)
Translates to: AAFVALMRSPRA*ATSFTALISTT
Trigger: GGTGGTGCTGATCAATGCAGTAAAGGACGTAGCCAAGGCCCTGGGTGACCTCATCAGCGCTACGAAGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp TTCTTGAGCTGCCACACTGCAGGGTCATCCCCAACTTaGCCCGCTGCAGCCTTCGTAGCGCTGATGAGGTCA +
Preference number: 6 (lower is better)
Translates to: FLSCHTAGSSPT*PAAAFVALMRS
Trigger: TGACCTCATCAGCGCTACGAAGGCTGCAGCGGGCAAAGTTGGGGATGACCCTGCAGTGTGGCAGCTCAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp AGAAGACCGCCAGTTCCTGACGTATGTGCTCTGTGGTaGCCTCTAGGGCCCGTGTGCCTTTGGTGGCCTCAT +
Preference number: 6 (lower is better)
Translates to: RRPPVPDVCALW*PLGPVCLWWPH
Trigger: ATGAGGCCACCAAAGGCACACGGGCCCTAGAGGCAACCACAGAGCACATACGTCAGGAACTGGCGGTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp TACCACCTTGGTACAGGCCACCAGCTGGGAAGTGGACAGAGCACATaGCGTAGCTGCAGCAATCACTTGGGTCTGAAGCCCGGAATCCTC +
Preference number: 6 (lower is better)
Translates to: YHLGTGHQLGSGQST*RSCSNHLGLKPGIL
Trigger: GAGGATTCCGGGCTTCAGACCCAAGTGATTGCTGCAGCTACGCAATGTGCTCTGTCCACTTCCCAGCTGGTGGCCTGTACCAAGGTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp TCCCCCAGCAGCTTGGCGATGGCAGAGCTCACCGCTTTGGTGCTGTaGCCAAGATCTTGGGTACACTTCTCCATTGTTTCCCCGGGTAAG +
Preference number: 6 (lower is better)
Translates to: SPSSLAMAELTALVL*PRSWVHFSIVSPGK
Trigger: CTTACCCGGGGAAACAATGGAGAAGTGTACCCAAGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGCCATCGCCAAGCTGCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 72 bp GTTCCTCGGGAGGCTTGCACCAGTTCTGTGGCGGCCTaGTTTAACCCAGCTGCAGCTTCATTCAATCGGCTC +
Preference number: 6 (lower is better)
Translates to: VPREACTSSVAA*FNPAAASFNRL
Trigger: GAGCCGATTGAATGAAGCTGCAGCTGGGTTAAATCAGGCCGCCACAGAACTGGTGCAAGCCTCCCGAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp AGGGCGGCTGCAGCACTTGCCACTGCCTTTGCTAGCTaGATTAGAACATCCTGGAAGTGGGGGTCAGTGTCA +
Preference number: 6 (lower is better)
Translates to: RAAAALATAFAS*IRTSWKWGSVS
Trigger: TGACACTGACCCCCACTTCCAGGATGTTCTAATGCAGCTAGCAAAGGCAGTGGCAAGTGCTGCAGCCGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp TCCTACCCCTCGAAGCAGCTGTCCATCTTCTGTAGCTaGTTGCGAGGCAGACACACAGCCCTCCACAGCTTT +
Preference number: 6 (lower is better)
Translates to: SYPSKQLSIFCS*LRGRHTALHSF
Trigger: AAAGCTGTGGAGGGCTGTGTGTCTGCCTCGCAAGCAGCTACAGAAGATGGACAGCTGCTTCGAGGGGTAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp CAGGCAGCTGACACAGCGGTTCAGGGCTTGGGTCACTaGTTTAGCTACCTGAGCAAGCCTTTGCTGGCTTTC +
Preference number: 6 (lower is better)
Translates to: QAADTAVQGLGH*FSYLSKPLLAF
Trigger: GAAAGCCAGCAAAGGCTTGCTCAGGTAGCTAAAGCAGTGACCCAAGCCCTGAACCGCTGTGTCAGCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp TTTGCACGGGCAAACTGTGTGGGTTCCACCAGTCCTTaGTGTCCAGCTTGGCTGTTGGGGTCAGAGACACCA +
Preference number: 6 (lower is better)
Translates to: FARANCVGSTSP*CPAWLLGSETP
Trigger: TGGTGTCTCTGACCCCAACAGCCAAGCTGGACAGCAAGGACTGGTGGAACCCACACAGTTTGCCCGTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp CCCCAGACTCTGACAGGCCATCTGAATTGCCTGGTTTaGACGGGCAAACTGTGTGGGTTCCACCAGTCCTTG +
Preference number: 6 (lower is better)
Translates to: PQTLTGHLNCLV*TGKLCGFHQSL
Trigger: CAAGGACTGGTGGAACCCACACAGTTTGCCCGTGCAAACCAGGCAATTCAGATGGCCTGTCAGAGTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp TGCTCGTCTCGAAGCTCTGAAGGCAAGAACTTGTACTaGTGCTGCCGGATCTGGGCGAGCTTTTTCCGAGCC +
Preference number: 6 (lower is better)
Translates to: CSSRSSEGKNLY*CCRIWASFFRA
Trigger: GGCTCGGAAAAAGCTCGCCCAGATCCGGCAGCAGCAGTACAAGTTCTTGCCTTCAGAGCTTCGAGACGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp TGCTCTTCCACTCCCTGTTCCCTCAGTGTCCGCCCATaGTCCAGCCAGTTCAACTCATCGTCTGTGTGCAAC +
Preference number: 6 (lower is better)
Translates to: CSSTPCSLSVRP*SSQFNSSSVCN
Trigger: GTTGCACACAGACGATGAGTTGAACTGGCTGGACCATGGGCGGACACTGAGGGAACAGGGAGTGGAAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000130353.2
CDS CCA 72 bp TGCTTGGAGGAAGCGAGTCACTCAGGAGTCGCTTGCTaGCATCTCCAACGGCTCGTAGGGCATTATCCACGT +
Preference number: 6 (lower is better)
Translates to: CLEEASHSGVAC*HLQRLVGHYPR
Trigger: ACGTGGATAATGCCCTACGAGCCGTTGGAGATGCCAGCAAGCGACTCCTGAGTGACTCGCTTCCTCCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp CAACGTTTTAGTCTGGTCCAGAAGTGCCATCTGCTGTaGGTGGCTCAGGGTCTTAGACGCAGCACCCACTGC +
Preference number: 6 (lower is better)
Translates to: QRFSLVQKCHLL*VAQGLRRSTHC
Trigger: GCAGTGGGTGCTGCGTCTAAGACCCTGAGCCACCCACAGCAGATGGCACTTCTGGACCAGACTAAAACGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp GCCTCCACCATCTTGGCGGTGGCATCAGCGAGGATCTaGGCAGCACTCAGGAGCTTTCTAGAGTTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: ASTILAVASARI*AALRSFLEFSR
Trigger: TCTGGAGAACTCTAGAAAGCTCCTGAGTGCTGCCAAGATCCTCGCTGATGCCACCGCCAAGATGGTGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp AGAAGTTTGCTTGAAGACATGGATATGCCCTTCAGGTaGGACACCACCTGGGCTCGGTCCTCCTGGCTCGGG +
Preference number: 6 (lower is better)
Translates to: RSLLEDMDMPFR*DTTWARSSWLG
Trigger: CCCGAGCCAGGAGGACCGAGCCCAGGTGGTGTCCAACCTGAAGGGCATATCCATGTCTTCAAGCAAACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp TTGGCTGACTGTACAAACTGGCGCTTGGCAGTGGGATaGGCAGTCCTAGCGGAAGCCAGGCGACAGCTGTTA +
Preference number: 6 (lower is better)
Translates to: LADCTNWRLAVG*AVLAEARRQLL
Trigger: TAACAGCTGTCGCCTGGCTTCCGCTAGGACTGCCAATCCCACTGCCAAGCGCCAGTTTGTACAGTCAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp GCCCGAAGCATGTCCGCAATAGCCCGTCGGCTCAGATaGGCTGTGGCAATGACATCTTCCTGTCGACAGGAA +
Preference number: 6 (lower is better)
Translates to: ARSMSAIARRLR*AVAMTSSCRQE
Trigger: TTCCTGTCGACAGGAAGATGTCATTGCCACAGCCAATCTGAGCCGACGGGCTATTGCGGACATGCTTCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp TGGGCAATCTCCCCCAGCAGCTTGGCGATGGCAGAGCTCACCGCTTaGGTGCTGTTGCCAAGATCTTGGGTACACTTCTCCATTGTTTCC +
Preference number: 6 (lower is better)
Translates to: WAISPSSLAMAELTA*VLLPRSWVHFSIVS
Trigger: GGAAACAATGGAGAAGTGTACCCAAGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGCCATCGCCAAGCTGCTGGGGGAGATTGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 72 bp GACAAGATTGGCTGTACTGTTGGCCACCTCCTTGGCTaGCTGTACAAACTGGCGCTTGGCAGTGGGATTGGC +
Preference number: 6 (lower is better)
Translates to: DKIGCTVGHLLG*LYKLALGSGIG
Trigger: GCCAATCCCACTGCCAAGCGCCAGTTTGTACAGTCAGCCAAGGAGGTGGCCAACAGTACAGCCAATCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 72 bp AGCCTGGAGTGCAGCCAGAACATGGGAGACCTTCTCTaGCACTCTGCGGGCACACTCTATGAGCTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: SLECSQNMGDLL*HSAGTLYELLL
Trigger: AAGAAGGAGCTCATAGAGTGTGCCCGCAGAGTGTCAGAGAAGGTCTCCCATGTTCTGGCTGCACTCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp GCCCACTGCTGTATAGTCTGTCTCTGCAGGATCTCCTaGTGTCAGGTTTACCACAGAGGCAGTGCCAGCTGT +
Preference number: 6 (lower is better)
Translates to: AHCCIVCLCRIS*CQVYHRGSASC
Trigger: ACAGCTGGCACTGCCTCTGTGGTAAACCTGACAGCAGGAGATCCTGCAGAGACAGACTATACAGCAGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 72 bp GGTGACTGCACAGCCCACTGCTGTATAGTCTGTCTCTaGAGGATCTCCTGCTGTCAGGTTTACCACAGAGGC +
Preference number: 6 (lower is better)
Translates to: GDCTAHCCIVCL*RISCCQVYHRG
Trigger: GCCTCTGTGGTAAACCTGACAGCAGGAGATCCTGCAGAGACAGACTATACAGCAGTGGGCTGTGCAGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 72 bp CCAGCAGCTTGGCGATGGCAGAGCTCACCGCTTTGGTaGTGTTGCCAAGATCTTGGGTACACTTCTCCATTG +
Preference number: 6 (lower is better)
Translates to: PAAWRWQSSPLW*CCQDLGYTSPL
Trigger: CAATGGAGAAGTGTACCCAAGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGCCATCGCCAAGCTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp ACATTGGTCACCATCACCTTGGCAGAGTTCTTGAGCTaGCACACTGCAGGGTCATCCCCAACTTTGCCCGCT +
Preference number: 6 (lower is better)
Translates to: TLVTITLAEFLS*HTAGSSPTLPA
Trigger: AGCGGGCAAAGTTGGGGATGACCCTGCAGTGTGGCAGCTCAAGAACTCTGCCAAGGTGATGGTGACCAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp TCTCGAAGCTCTGAAGGCAAGAACTTGTACTGCTGCTaGCGGATCTGGGCGAGCTTTTTCCGAGCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: SRSSEGKNLYCC*RIWASFFRASS
Trigger: GGAAGAGGCTCGGAAAAAGCTCGCCCAGATCCGGCAGCAGCAGTACAAGTTCTTGCCTTCAGAGCTTCGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp TCGTCTCGAAGCTCTGAAGGCAAGAACTTGTACTGCTaGTGCCGGATCTGGGCGAGCTTTTTCCGAGCCTCT +
Preference number: 6 (lower is better)
Translates to: SSRSSEGKNLYC*CRIWASFFRAS
Trigger: AGAGGCTCGGAAAAAGCTCGCCCAGATCCGGCAGCAGCAGTACAAGTTCTTGCCTTCAGAGCTTCGAGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp GCAGAGCTCACCGCTTTGGTGCTGTTGCCAAGATCTTaGGTACACTTCTCCATTGTTTCCCCGGGTAAGGGC +
Preference number: 6 (lower is better)
Translates to: AELTALVLLPRS*VHFSIVSPGKG
Trigger: GCCCTTACCCGGGGAAACAATGGAGAAGTGTACCCAAGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp TGGGTTCCACCAGTCCTTGCTGTCCAGCTTGGCTGTTaGGGTCAGAGACACCAACTAGATATGCTGCCTGTG +
Preference number: 6 (lower is better)
Translates to: WVPPVLAVQLGC*GQRHQLDMLPV
Trigger: CACAGGCAGCATATCTAGTTGGTGTCTCTGACCCCAACAGCCAAGCTGGACAGCAAGGACTGGTGGAACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp GTCTCATTCTCCTGGTCTTCGAAGGCTGCAGCTTTCTaGGCCGCCTTTACCAGGTTATCTGAGGCCCTCTTC +
Preference number: 6 (lower is better)
Translates to: VSFSWSSKAAAF*AAFTRLSEALF
Trigger: GAAGAGGGCCTCAGATAACCTGGTAAAGGCGGCCCAGAAAGCTGCAGCCTTCGAAGACCAGGAGAATGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp TTGGTCATTCGGATGAAGTCTTCAGGGGTAGAGGTCTaGGCAGGTGGCTCTGGGGAACAGAAGACCGCCAGT +
Preference number: 6 (lower is better)
Translates to: LVIRMKSSGVEV*AGGSGEQKTAS
Trigger: ACTGGCGGTCTTCTGTTCCCCAGAGCCACCTGCCAAGACCTCTACCCCTGAAGACTTCATCCGAATGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp GCCTTTACCAGGTTATCTGAGGCCCTCTTCACTGCATaGCCAGCAGCCTGGAGCCGTTTCATTGCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: AFTRLSEALFTA*PAAWSRFIASE
Trigger: CTCTGAGGCAATGAAACGGCTCCAGGCTGCTGGCAATGCAGTGAAGAGGGCCTCAGATAACCTGGTAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp GGAGAAGCAGGGTCTGTGGACAAGGCCTTAGCGGCAAGGAGAAGTTaGCTTGAAGACATGGATATGCCCTTCAGGTTGGACACCACCTGG +
Preference number: 6 (lower is better)
Translates to: GEAGSVDKALAARRS*LEDMDMPFRLDTTW
Trigger: CCAGGTGGTGTCCAACCTGAAGGGCATATCCATGTCTTCAAGCAAACTTCTCCTTGCCGCTAAGGCCTTGTCCACAGACCCTGCTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp AGCCCGAGCAGCGCTGGCCAGCGGCTCAATGAGATGAGAAATTTCTaGCACTGCAGTGAGCATCTGGGTGTGCAAAGCCTCTTGAGAGAT +
Preference number: 6 (lower is better)
Translates to: SPSSAGQRLNEMRNF*HCSEHLGVQSLLRD
Trigger: ATCTCTCAAGAGGCTTTGCACACCCAGATGCTCACTGCAGTGCAAGAAATTTCTCATCTCATTGAGCCGCTGGCCAGCGCTGCTCGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 72 bp CTGCTGTCAGGTTTACCACAGAGGCAGTGCCAGCTGTaGTGGCATCTACCTGGGAGTGGATCTCATGCTTTG +
Preference number: 6 (lower is better)
Translates to: LLSGLPQRQCQL*WHLPGSGSHAL
Trigger: CAAAGCATGAGATCCACTCCCAGGTAGATGCCATCACAGCTGGCACTGCCTCTGTGGTAAACCTGACAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS TCA 72 bp CAGAGCAGCCATGGCCCAGCTCCTGTACTCGGTGTTTaGTGTGAGCGCCTATCTCTTCATTTTCAGCAGCCA +
Preference number: 6 (lower is better)
Translates to: QSSHGPAPVLGV*CERLSLHFQQP
Trigger: TGGCTGCTGAAAATGAAGAGATAGGCGCTCACATCAAACACCGAGTACAGGAGCTGGGCCATGGCTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp GCTTGGCGATGGCAGAGCTCACCGCTTTGGTGCTGTTaGCAAGATCTTGGGTACACTTCTCCATTGTTTCCC +
Preference number: 6 (lower is better)
Translates to: AWRWQSSPLWCC*QDLGYTSPLFP
Trigger: GGGAAACAATGGAGAAGTGTACCCAAGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGCCATCGCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp CATTCAATCGGCTCTGTGCTTCTTGAAATGTCCCCGTaGTTGGAGGAAGCGAGTCACTCAGGAGTCGCTTGC +
Preference number: 6 (lower is better)
Translates to: HSIGSVLLEMSP*LEEASHSGVAC
Trigger: GCAAGCGACTCCTGAGTGACTCGCTTCCTCCAAGCACGGGGACATTTCAAGAAGCACAGAGCCGATTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp CTGTTCAGAGCCGCAATGGCTGTCTCACACTCCAGCTaGCCTGGGGCTTTGTCCCTCATGCTTGTAATAAGT +
Preference number: 6 (lower is better)
Translates to: LFRAAMAVSHSS*PGALSLMLVIS
Trigger: ACTTATTACAAGCATGAGGGACAAAGCCCCAGGGCAGCTGGAGTGTGAGACAGCCATTGCGGCTCTGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp GATGAGGTCACCCAGGGCCTTGGCTACGTCCTTTACTaGATTGATCAGCACCACCTGAGTTTCAGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: DEVTQGLGYVLY*IDQHHLSFRVF
Trigger: GAAGACCCTGAAACTCAGGTGGTGCTGATCAATGCAGTAAAGGACGTAGCCAAGGCCCTGGGTGACCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp AGCCTGGAGCCGTTTCATTGCCTCAGAGTCCTGATCTaGTTTGACCTTGCAAGCTACCAGGAGCTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: SLEPFHCLRVLI*FDLASYQELSC
Trigger: ACAGCTCAGCTCCTGGTAGCTTGCAAGGTCAAAGCAGATCAGGACTCTGAGGCAATGAAACGGCTCCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp CCTTTACCAGGTTATCTGAGGCCCTCTTCACTGCATTaGCAGCAGCCTGGAGCCGTTTCATTGCCTCAGAGT +
Preference number: 6 (lower is better)
Translates to: PLPGYLRPSSLH*QQPGAVSLPQS
Trigger: ACTCTGAGGCAATGAAACGGCTCCAGGCTGCTGGCAATGCAGTGAAGAGGGCCTCAGATAACCTGGTAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp CCCAGCTGCAGCTTCATTCAATCGGCTCTGTGCTTCTaGAAATGTCCCCGTGCTTGGAGGAAGCGAGTCACT +
Preference number: 6 (lower is better)
Translates to: PSCSFIQSALCF*KCPRAWRKRVT
Trigger: AGTGACTCGCTTCCTCCAAGCACGGGGACATTTCAAGAAGCACAGAGCCGATTGAATGAAGCTGCAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp AGCGCTGGCCAGCGGCTCAATGAGATGAGAAATTTCTaGCACTGCAGTGAGCATCTGGGTGTGCAAAGCCTC +
Preference number: 6 (lower is better)
Translates to: SAGQRLNEMRNF*HCSEHLGVQSL
Trigger: GAGGCTTTGCACACCCAGATGCTCACTGCAGTGCAAGAAATTTCTCATCTCATTGAGCCGCTGGCCAGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp GAGGCTGTGGCAATGGCATCTCCAAACTCCGGCAGATTTCCATTCTaGGCATTTTGGGAGATGCCAGTCATGGCCTCACCTAGGACCTTG +
Preference number: 6 (lower is better)
Translates to: EAVAMASPNSGRFPF*AFWEMPVMASPRTL
Trigger: CAAGGTCCTAGGTGAGGCCATGACTGGCATCTCCCAAAATGCCAAGAATGGAAATCTGCCGGAGTTTGGAGATGCCATTGCCACAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp CTAGCGGAAGCCAGGCGACAGCTGTTACACAATGCAGATGTGTGTTaGGCTACAATAGTGGCTGCAGATAACACCTGGGCCTGGGTACAG +
Preference number: 6 (lower is better)
Translates to: LAEARRQLLHNADVC*ATIVAADNTWAWVQ
Trigger: CTGTACCCAGGCCCAGGTGTTATCTGCAGCCACTATTGTAGCCAAACACACATCTGCATTGTGTAACAGCTGTCGCCTGGCTTCCGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 72 bp AGGTCAAGGAAGCCAGCCTTGTGCTTCTGTTCATTGTaGGGTCCAAACTGGATCTGGCACTGGAAGCCTGCA +
Preference number: 6 (lower is better)
Translates to: RSRKPALCFCSL*GPNWIWHWKPA
Trigger: TGCAGGCTTCCAGTGCCAGATCCAGTTTGGACCTCACAATGAACAGAAGCACAAGGCTGGCTTCCTTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 72 bp GGCTGGTGTTTGACTTGGTTACCATCTCCTGAACAGTaGCAGCAATGGCCTTGGCTGTCCTCACCATGGTTG +
Preference number: 6 (lower is better)
Translates to: GWCLTWLPSPEQ*QQWPWLSSPWL
Trigger: CAACCATGGTGAGGACAGCCAAGGCCATTGCTGTCACTGTTCAGGAGATGGTAACCAAGTCAAACACCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 72 bp ATGTCACATTGGTCACCATCACCTTGGCAGAGTTCTTaGGCTGCCACACTGCAGGGTCATCCCCAACTTTGC +
Preference number: 6 (lower is better)
Translates to: MSHWSPSPWQSS*AATLQGHPQLC
Trigger: GCAAAGTTGGGGATGACCCTGCAGTGTGGCAGCTCAAGAACTCTGCCAAGGTGATGGTGACCAATGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp AACTGTGTGGGTTCCACCAGTCCTTGCTGTCCAGCTTaGCTGTTGGGGTCAGAGACACCAACTAGATATGCT +
Preference number: 6 (lower is better)
Translates to: NCVGSTSPCCPA*LLGSETPTRYA
Trigger: AGCATATCTAGTTGGTGTCTCTGACCCCAACAGCCAAGCTGGACAGCAAGGACTGGTGGAACCCACACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp CAGAGCCGCAATGGCTGTCTCACACTCCAGCTGCCCTaGGGCTTTGTCCCTCATGCTTGTAATAAGTTTCTT +
Preference number: 6 (lower is better)
Translates to: QSRNGCLTLQLP*GFVPHACNKFL
Trigger: AAGAAACTTATTACAAGCATGAGGGACAAAGCCCCAGGGCAGCTGGAGTGTGAGACAGCCATTGCGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp TCCTTCCGAAGCATCTCTTCCTGTGCTGCGATAATCTaGGCAATGCCCCCAACCATTTTCTCCTTCACCACC +
Preference number: 6 (lower is better)
Translates to: SFRSISSCAAII*AMPPTIFSFTT
Trigger: GGTGGTGAAGGAGAAAATGGTTGGGGGCATTGCCCAGATTATCGCAGCACAGGAAGAGATGCTTCGGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp AGCTTGGCGATGGCAGAGCTCACCGCTTTGGTGCTGTaGCCAAGATCTTGGGTACACTTCTCCATTGTTTCC +
Preference number: 6 (lower is better)
Translates to: SLAMAELTALVL*PRSWVHFSIVS
Trigger: GGAAACAATGGAGAAGTGTACCCAAGATCTTGGCAACAGCACCAAAGCGGTGAGCTCTGCCATCGCCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp GGGTCTGTGGACAAGGCCTTAGCGGCAAGGAGAAGTTaGCTTGAAGACATGGATATGCCCTTCAGGTTGGAC +
Preference number: 6 (lower is better)
Translates to: GSVDKALAARRS*LEDMDMPFRLD
Trigger: GTCCAACCTGAAGGGCATATCCATGTCTTCAAGCAAACTTCTCCTTGCCGCTAAGGCCTTGTCCACAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 72 bp GCCAGGCGACAGCTGTTACACAATGCAGATGTGTGTTaGGCTACAATAGTGGCTGCAGATAACACCTGGGCC +
Preference number: 6 (lower is better)
Translates to: ARRQLLHNADVC*ATIVAADNTWA
Trigger: GGCCCAGGTGTTATCTGCAGCCACTATTGTAGCCAAACACACATCTGCATTGTGTAACAGCTGTCGCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CAA 90 bp ATGGCATCTACCTGGGAGTGGATCTCATGCTTTGATTCATCCATCTaGTTCTTACGCCAAGCTTTGGAGGCAGCATCCTGGCCAAGAGGG +
Preference number: 6 (lower is better)
Translates to: MASTWEWISCFDSSI*FLRQALEAASWPRG
Trigger: CCCTCTTGGCCAGGATGCTGCCTCCAAAGCTTGGCGTAAGAACAAGATGGATGAATCAAAGCATGAGATCCACTCCCAGGTAGATGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS TCA 72 bp TGTGGACAAGGCCTTAGCGGCAAGGAGAAGTTTGCTTaGAGACATGGATATGCCCTTCAGGTTGGACACCAC +
Preference number: 6 (lower is better)
Translates to: CGQGLSGKEKFA*RHGYALQVGHH
Trigger: GTGGTGTCCAACCTGAAGGGCATATCCATGTCTTCAAGCAAACTTCTCCTTGCCGCTAAGGCCTTGTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp ACTCCGGCAGATTTCCATTCTTGGCATTTTGGGAGATaGCAGTCATGGCCTCACCTAGGACCTTGGAGTTCT +
Preference number: 6 (lower is better)
Translates to: TPADFHSWHFGR*QSWPHLGPWSS
Trigger: AGAACTCCAAGGTCCTAGGTGAGGCCATGACTGGCATCTCCCAAAATGCCAAGAATGGAAATCTGCCGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS GCA 72 bp TTCCAGCTCTCGTTCCTTCCGAAGCATCTCTTCCTGTaGTGCGATAATCTGGGCAATGCCCCCAACCATTTT +
Preference number: 6 (lower is better)
Translates to: FQLSFLPKHLFL*CDNLGNAPNHF
Trigger: AAAATGGTTGGGGGCATTGCCCAGATTATCGCAGCACAGGAAGAGATGCTTCGGAAGGAACGAGAGCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp ATCTTGTTCTTACGCCAAGCTTTGGAGGCAGCATCCTaGCCAAGAGGGGGTAGAGTCTCAAAGTCATCCAGA +
Preference number: 6 (lower is better)
Translates to: ILFLRQALEAAS*PRGGRVSKSSR
Trigger: TCTGGATGACTTTGAGACTCTACCCCCTCTTGGCCAGGATGCTGCCTCCAAAGCTTGGCGTAAGAACAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS CCA 72 bp ACCACAGAGGCAGTGCCAGCTGTGATGGCATCTACCTaGGAGTGGATCTCATGCTTTGATTCATCCATCTTG +
Preference number: 6 (lower is better)
Translates to: TTEAVPAVMAST*EWISCFDSSIL
Trigger: CAAGATGGATGAATCAAAGCATGAGATCCACTCCCAGGTAGATGCCATCACAGCTGGCACTGCCTCTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS CAA 72 bp TCCAAAGCTTTCCCAGCCTCTAGCCAGATGCCTTTTTaGGGGTCATCATCTGACAGAAAGAGCCCAAAGTCG +
Preference number: 6 (lower is better)
Translates to: SKAFPASSQMPF*GSSSDRKSPKS
Trigger: CGACTTTGGGCTCTTTCTGTCAGATGATGACCCCAAAAAAGGCATCTGGCTAGAGGCTGGGAAAGCTTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000130353.2
CDS CAA 72 bp ACCTGGGAGTGGATCTCATGCTTTGATTCATCCATCTaGTTCTTACGCCAAGCTTTGGAGGCAGCATCCTGG +
Preference number: 6 (lower is better)
Translates to: TWEWISCFDSSI*FLRQALEAASW
Trigger: CCAGGATGCTGCCTCCAAAGCTTGGCGTAAGAACAAGATGGATGAATCAAAGCATGAGATCCACTCCCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 72 bp CCAGCTGTGATGGCATCTACCTGGGAGTGGATCTCATaGTTTGATTCATCCATCTTGTTCTTACGCCAAGCT +
Preference number: 6 (lower is better)
Translates to: PAVMASTWEWIS*FDSSILFLRQA
Trigger: AGCTTGGCGTAAGAACAAGATGGATGAATCAAAGCATGAGATCCACTCCCAGGTAGATGCCATCACAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS CAA 90 bp TCTTGGGTACACTTCTCCATTGTTTCCCCGGGTAAGGGCTTAAGCTaGCCATCTCGAGCTGCTGCTTTTATTTCCTGTAGGTCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: SWVHFSIVSPGKGLS*PSRAAAFISCRSFS
Trigger: AGAGAAAGACCTACAGGAAATAAAAGCAGCAGCTCGAGATGGCAAGCTTAAGCCCTTACCCGGGGAAACAATGGAGAAGTGTACCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS CCA 72 bp ACAAGAACCTTTGCTGTCTTTAAGATACCCTCCCGGTaGTCAGCAAAAGTTTCAGCACCCTCACGGTTAAGT +
Preference number: 6 (lower is better)
Translates to: TRTFAVFKIPSR*SAKVSAPSRLS
Trigger: ACTTAACCGTGAGGGTGCTGAAACTTTTGCTGACCACCGGGAGGGTATCTTAAAGACAGCAAAGGTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030187.14
CDS TCA 72 bp TGTGATGGCATCTACCTGGGAGTGGATCTCATGCTTTaGTTCATCCATCTTGTTCTTACGCCAAGCTTTGGA +
Preference number: 6 (lower is better)
Translates to: CDGIYLGVDLML*FIHLVLTPSFG
Trigger: TCCAAAGCTTGGCGTAAGAACAAGATGGATGAATCAAAGCATGAGATCCACTCCCAGGTAGATGCCATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000125509.2
CDS GCA 72 bp TCCAGCCAGTTCAACTCATCGTCTGTGTGCAACTTCTaGTTTAGCTTCTCCATCTTCTTTTCATCTCGCAGT +
Preference number: 6 (lower is better)
Translates to: SSQFNSSSVCNF*FSFSIFFSSRS
Trigger: ACTGCGAGATGAAAAGAAGATGGAGAAGCTAAAGCAGAAGTTGCACACAGACGATGAGTTGAACTGGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000130353.2
CDS CCA 72 bp TCTTCCATCAGCTCTCGAACCAGTGAATACTCATCATaGTTGGTGATACCAATTCGGGCACAAATGGTCATG +
Preference number: 6 (lower is better)
Translates to: SSISSRTSEYSS*LVIPIRAQMVM
Trigger: CATGACCATTTGTGCCCGAATTGGTATCACCAACCATGATGAGTATTCACTGGTTCGAGAGCTGATGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030187.14
ENSMUST00000130353.2