Pregenerated sensors for TLL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053626Ensembl transcript IDs: ENSMUST00000066166.6
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATGAAGATGAAATATTCCAGTTTCCAAACACACATGCACACACATaGACACACACACACACGCACACACACACACACGCACACACACAC | + |
|
Preference number: 1 (lower is better) Translates to: NEDEIFQFPNTHAHT*THTHTHTHTHAHTH Trigger: GTGTGTGTGTGCGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGCATGTGTGTGCATGTGTGTTTGGAAACTGGAATATTTCATCTTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR CCA 90 bp | GCAGCAGCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTaGAAGATGGCTGCACACACCTCGTTGGAATTTTATCTTAAAGGT | + |
|
Preference number: 1 (lower is better) Translates to: AAAVVTGLRNIQAVI*KMAAHTSLEFYLKG Trigger: ACCTTTAAGATAAAATTCCAACGAGGTGTGTGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGCTGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR CCA 90 bp | TTTCCAAGCTATGATCCGTCCCATCATTTCTACGTCCCCAGATCTTaGAAAAGTAGTCAAGAAATCACTCCAGAGAATCACAGCTCATTA | + |
|
Preference number: 1 (lower is better) Translates to: FPSYDPSHHFYVPRS*KSSQEITPENHSSL Trigger: TAATGAGCTGTGATTCTCTGGAGTGATTTCTTGACTACTTTTCCAAGATCTGGGGACGTAGAAATGATGGGACGGATCATAGCTTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR TCA 90 bp | ACTGTCCAAAATGTGAAGCATCTATTTCAAGCTGTTAATCTTCCTTaGACAAGCATGACTTTCAAACATCCTTGCAATGCCAATCAGGTT | + |
|
Preference number: 1 (lower is better) Translates to: TVQNVKHLFQAVNLP*TSMTFKHPCNANQV Trigger: AACCTGATTGGCATTGCAAGGATGTTTGAAAGTCATGCTTGTTCAAGGAAGATTAACAGCTTGAAATAGATGCTTCACATTTTGGACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR TCA 90 bp | TGTAGACACTATAGATATTTCAAACTTCTCAAGATACAGATACAATaGAGTGGTCACAAAATCATTTGTGTGAACAGGTTAAGCTGGCCT | + |
|
Preference number: 1 (lower is better) Translates to: CRHYRYFKLLKIQIQ*SGHKIICVNRLSWP Trigger: AGGCCAGCTTAACCTGTTCACACAAATGATTTTGTGACCACTTCATTGTATCTGTATCTTGAGAAGTTTGAAATATCTATAGTGTCTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR-3UTR GCA 90 bp | TGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCACACACCTCGTTTGTCTTCTTTCCATATaGACATTCCTTTCTGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: WTKKHPGSHLEDGCTHLVCLLSI*TFLSVL Trigger: CAGAACAGAAAGGAATGTGCATATGGAAAGAAGACA...AACGAGGTGTGTGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR CAA 90 bp | GAACCACCTTCCAAAGACCACTATTCCACATCACCTTACATGAATTaGGTTTACACTGTGTCTGACCTACAGAGTCTAAGCAAACATGCT | + |
|
Preference number: 2 (lower is better) Translates to: EPPSKDHYSTSPYMN*VYTVSDLQSLSKHA Trigger: AGCATGTTTGCTTAGACTCTGTAGGTCAGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTCTTTGGAAGGTGGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR-3UTR TCA 90 bp | TACACTGTGTCTGACCTACAGAGTCTAAGCAAACATGCTAAGACCCAAGAAGTGTTCCTTGAACAAGCATaGCTTTCAAACATCCTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: YTVSDLQSLSKHAKTQEVFLEQA*LSNILA Trigger: TGCAAGGATGTTTGAAAGTCATGCTTGTTCAAGGAA...CACTTCTTGGGTCTTAGCATGTTTGCTTAGACTCTGTAGGTCAGACACAGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGCAGCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATTCACAGCTCATTAAATaGACTGTCCAAAATGTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SSSSSNWTKKHPGSHLEDSQLIK*TVQNVK Trigger: CTTCACATTTTGGACAGTTCATTTAATGAGCTGTGA...ATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGCTGCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR-3UTR TCA 90 bp | GACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTGACCTAGCTGTTAATCTTCCTTaGACAAGCATGACTTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: DHYSTSPYMNLVYTVSDLAVNLP*TSMTFK Trigger: TTTGAAAGTCATGCTTGTTCAAGGAAGATTAACAGC...TAGGTCAGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR-3UTR GCA 90 bp | GACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTGACCTAACTTTCAAACATCCTTaGAATGCCAATCAGGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: DHYSTSPYMNLVYTVSDLTFKHP*NANQVF Trigger: GAAAACCTGATTGGCATTGCAAGGATGTTTGAAAGT...TAGGTCAGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR GCA 72 bp | GAAATATTCCAGTTTCCAAACACACATGCACACACATaGACACACACACACACGCACACACACACACACGCA | + |
|
Preference number: 3 (lower is better) Translates to: EIFQFPNTHAHT*THTHTHTHTHA Trigger: TGCGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGCATGTGTGTGCATGTGTGTTTGGAAACTGGAATATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR TCA 72 bp | CACCTTCCAAAGACCACTATTCCACATCACCTTACATaGATTTGGTTTACACTGTGTCTGACCTACAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: HLPKTTIPHHLT*IWFTLCLTYRV Trigger: GACTCTGTAGGTCAGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTCTTTGGAAGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR CCA 72 bp | TATGATCCGTCCCATCATTTCTACGTCCCCAGATCTTaGAAAAGTAGTCAAGAAATCACTCCAGAGAATCAC | + |
|
Preference number: 3 (lower is better) Translates to: YDPSHHFYVPRS*KSSQEITPENH Trigger: GTGATTCTCTGGAGTGATTTCTTGACTACTTTTCCAAGATCTGGGGACGTAGAAATGATGGGACGGATCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR CCA 72 bp | GTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTaGAAGATGGCTGCACACACCTCGTTGGAATTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: VVTGLRNIQAVI*KMAAHTSLEFY Trigger: ATAAAATTCCAACGAGGTGTGTGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR-3UTR CAA 90 bp | TACACTGTGTCTGACCTACAGAGTCTAAGCAAACATGCTAAGACCCAAGAAGTGGACTTTCAAACATCCTaGCAATGCCAATCAGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: YTVSDLQSLSKHAKTQEVDFQTS*QCQSGF Trigger: AAAACCTGATTGGCATTGCAAGGATGTTTGAAAGTC...CACTTCTTGGGTCTTAGCATGTTTGCTTAGACTCTGTAGGTCAGACACAGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR TCA 72 bp | AATGTGAAGCATCTATTTCAAGCTGTTAATCTTCCTTaGACAAGCATGACTTTCAAACATCCTTGCAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: NVKHLFQAVNLP*TSMTFKHPCNA Trigger: GGCATTGCAAGGATGTTTGAAAGTCATGCTTGTTCAAGGAAGATTAACAGCTTGAAATAGATGCTTCACATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | TGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCACACACCTCGTTGATTCTGTACTGGCTTaGCGCGATCACTTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: WTKKHPGSHLEDGCTHLVDSVLA*RDHLPH Trigger: GTGTGGCAAGTGATCGCGCCAAGCCAGTACAGAATC...AACGAGGTGTGTGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGACCTACAGAGTCTAAGCAAACATGCTAAGACCCAAGAAGTGGGTTTCGGGGATCTGGTATCTTaGTGCCACATAGTCGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSDLQSLSKHAKTQEVGFGDLVS*CHIVGQ Trigger: TTGGCCGACTATGTGGCAGCAAGATACCAGATCCCC...GAAACCCACTTCTTGGGTCTTAGCATGTTTGCTTAGACTCTGTAGGTCAGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | GCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCAACAGCTTCTTCTGTCTaGCCCCAGTTCATAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVVTGLRNIQAVIWKMAATASSV*PQFIAR Trigger: CCTGGCTATGAACTGGGGCCAGACAGAAGAAGCTGT...TGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | GCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCAGTGCAATGTCTCCTTTaGTTAACCGGGTCCGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: AVVTGLRNIQAVIWKMAAVQCLL*LTGSVD Trigger: GTCAACGGACCCGGTTAAGCAAAGGAGACATTGCAC...TGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | GTGTCTGACCTACAGAGTCTAAGCAAACATGCTAAGACCCAAGAAGTGGGTTTCCTCCTCGGTCAGGTTTaGCACACTCATCTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSDLQSLSKHAKTQEVGFLLGQV*HTHLPL Trigger: AAGAGGAAGATGAGTGTGCCAAACCTGACCGAGGAG...GAAACCCACTTCTTGGGTCTTAGCATGTTTGCTTAGACTCTGTAGGTCAGACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | GACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTGACCTATTGGAGGGTACTCTTTaGGCCAGCCGGGGGTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: DHYSTSPYMNLVYTVSDLLEGTL*ASRGWL Trigger: TAACCACCCCCGGCTGGCCCAAAGAGTACCCTCCAA...TAGGTCAGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | TGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCACACACCTCGTTGCACTCTTTCCTGCTTaGATACTTGTCTGGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WTKKHPGSHLEDGCTHLVALFPA*ILVWPV Trigger: AACTGGCCAGACAAGTATCCAAGCAGGAAAGAGTGC...AACGAGGTGTGTGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR TCA 90 bp | TACACTGTGTCTGACCTACAGAGTCTAAGCAAACATGCTAAGACCCAAGAAGTGTATCCTTTCCGTTCTTaGGGTAGCAGCTCTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YTVSDLQSLSKHAKTQEVYPFRS*GSSSGN Trigger: GTTCCCAGAGCTGCTACCTCAAGAACGGAAAGGATA...CACTTCTTGGGTCTTAGCATGTTTGCTTAGACTCTGTAGGTCAGACACAGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | CTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCACACACCTCGTTGGAACCACAGAACTTGCCATaGAGTTTAGACTCAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRNIQAVIWKMAAHTSLEPQNLP*SLDSEE Trigger: TTCCTCTGAGTCTAAACTGCATGGCAAGTTCTGTGG...TTCCAACGAGGTGTGTGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | TGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCACACACCTCGTTTCATGCTTGTTCTCATaGAACACGAATCCATTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: WTKKHPGSHLEDGCTHLVSCLFS*NTNPFR Trigger: CCGGAATGGATTCGTGTTGCATGAGAACAAGCATGA...AACGAGGTGTGTGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | TCAGCACTTCCCCAGAGAGAAATGAGTTTACTAGTGAACTGGGTATTATCCAGTTGCCCCTCGCTTCTTTaGCATGCCATGGTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SALPQREMSLLVNWVLSSCPSLL*HAMVSK Trigger: TTTGGAGACCATGGCATGCCAAAGAAGCGAGGGGCA...ACTGGATAATACCCAGTTCACTAGTAAACTCATTTCTCTCTGGGGAAGTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | TGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCACACACCTCGTTTTGAACATGGCTCTCTaGCTGCCAGTAAAGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WTKKHPGSHLEDGCTHLVLNMAL*LPVKFP Trigger: AGGAAACTTTACTGGCAGCCAGAGAGCCATGTTCAA...AACGAGGTGTGTGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAGCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGAAGGGTAGCCATTTaGGAATCCTGGGGAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSNWTKKHPGSHLEDGRVAI*ESWGRK Trigger: CTTTCTTCCCCAGGATTCCCAAATGGCTACCCTTCC...ATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGCTGCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR TCA 90 bp | GTGTCTGACCTACAGAGTCTAAGCAAACATGCTAAGACCCAAGAAGTGGGTTTCACGTGGCCCAGTTCATaGACAACAATTCCAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSDLQSLSKHAKTQEVGFTWPSS*TTIPNL Trigger: CAAGTTTGGAATTGTTGTTCATGAACTGGGCCACGT...GAAACCCACTTCTTGGGTCTTAGCATGTTTGCTTAGACTCTGTAGGTCAGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR TCA 90 bp | TCAGCACTTCCCCAGAGAGAAATGAGTTTACTAGTGAACTGGGTATTATCCAGTTCTACCAAGGAGAGGTaGCTTCCTCCAGTAACCATC | + |
|
Preference number: 4 (lower is better) Translates to: SALPQREMSLLVNWVLSSSTKER*LPPVTI Trigger: GATGGTTACTGGAGGAAGTCACCTCTCCTTGGTAGA...ACTGGATAATACCCAGTTCACTAGTAAACTCATTTCTCTCTGGGGAAGTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR TCA 90 bp | TCAGCACTTCCCCAGAGAGAAATGAGTTTACTAGTGAACTGGGTATTATCCAGTTGGTTATGGTGCCATTaGGCTTCGTCAGAAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SALPQREMSLLVNWVLSSWLWCH*ASSEVL Trigger: GAGGACTTCTGACGAAGCTCAATGGCACCATAACCA...ACTGGATAATACCCAGTTCACTAGTAAACTCATTTCTCTCTGGGGAAGTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR TCA 90 bp | TCAGCACTTCCCCAGAGAGAAATGAGTTTACTAGTGAACTGGGTATTATCCAGTCAGGTCTCTAGGCTTTaGCTCTGCTTTCAATCGACC | + |
|
Preference number: 4 (lower is better) Translates to: SALPQREMSLLVNWVLSSQVSRL*LCFQST Trigger: GGTCGATTGAAAGCAGAGTCAAAGCCTAGAGACCTG...ACTGGATAATACCCAGTTCACTAGTAAACTCATTTCTCTCTGGGGAAGTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | TGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCACACACCTCGTTAAAACACAGCAGCTTTaGACGGGTCCTTGTAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: WTKKHPGSHLEDGCTHLVKTQQL*TGPCNL Trigger: TAGATTACAAGGACCCGTGCAAAGCTGCTGTGTTTT...AACGAGGTGTGTGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | GCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCATATAAGTTGGTAGAGTaGCCCTCGCTTCTTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVVTGLRNIQAVIWKMAAYKLVE*PSLLWH Trigger: ATGCCAAAGAAGCGAGGGGCACTCTACCAACTTATA...TGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | TACACTGTGTCTGACCTACAGAGTCTAAGCAAACATGCTAAGACCCAAGAAGTGTTGCCACTGGATTCTTaGAGGGTTTCTCCACATGCT | + |
|
Preference number: 4 (lower is better) Translates to: YTVSDLQSLSKHAKTQEVLPLDS*RVSPHA Trigger: AGCATGTGGAGAAACCCTGCAAGAATCCAGTGGCAA...CACTTCTTGGGTCTTAGCATGTTTGCTTAGACTCTGTAGGTCAGACACAGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGACCTACAGAGTCTAAGCAAACATGCTAAGACCCAAGAAGTGGGTTTCTTCCTACCCAGTTACTaGTGCTACGAAACTCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: VSDLQSLSKHAKTQEVGFFLPSY*CYETQS Trigger: GGATTGAGTTTCGTAGCAGCAGTAACTGGGTAGGAA...GAAACCCACTTCTTGGGTCTTAGCATGTTTGCTTAGACTCTGTAGGTCAGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAGCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATCGCTTCATAGACAGCTaGAAACCCTTTTCCTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSNWTKKHPGSHLEDRFIDS*KPFSYP Trigger: TGGGTAGGAAAAGGGTTTGCAGCTGTCTATGAAGCG...ATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGCTGCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | GACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTGACCTACTAATGATGGTGACATaGTTGTCTCGGTCTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DHYSTSPYMNLVYTVSDLLMMVT*LSRSGR Trigger: CCGCCCAGACCGAGACAACCATGTCACCATCATTAG...TAGGTCAGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR TCA 90 bp | GACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTGACCTAAACTTCCCATCGTGTTaGCACACTCATGCTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: DHYSTSPYMNLVYTVSDLNFPSC*HTHADS Trigger: GCTGTCAGCATGAGTGTGTCAACACGATGGGAAGTT...TAGGTCAGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR TCA 90 bp | GTGTCTGACCTACAGAGTCTAAGCAAACATGCTAAGACCCAAGAAGTGGGTTTCAGCCACATCTCCAATTaGATAGATTTCTTCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSDLQSLSKHAKTQEVGFSHISN*IDFFWW Trigger: CCACCAGAAGAAATCTATTCAATTGGAGATGTGGCT...GAAACCCACTTCTTGGGTCTTAGCATGTTTGCTTAGACTCTGTAGGTCAGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | TCAGCACTTCCCCAGAGAGAAATGAGTTTACTAGTGAACTGGGTATTATCCAGTCAATTGCAGGACGAATaGCATTATCATCACGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SALPQREMSLLVNWVLSSQLQDE*HYHHGR Trigger: CCTCCCGTGATGATAATGGCATTCGTCCTGCAATTG...ACTGGATAATACCCAGTTCACTAGTAAACTCATTTCTCTCTGGGGAAGTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | GACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTGACCTACAGACACTCTCCAGATaGAGTGTGTGTAGGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DHYSTSPYMNLVYTVSDLQTLSR*SVCRKG Trigger: ACCCTTCCTACACACACTGCATCTGGAGAGTGTCTG...TAGGTCAGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | GGAAAGTTCTCTTTCACTTCAGAGATAACTCTAATCTTGCAGGTTTCTTTTGCTGTTCGCAGCAAACCCTaGCTTGTTCACAGTCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKFSFTSEITLILQVSFAVRSKP*LVHSPV Trigger: GACGGGACTGTGAACAAGGCAGGGTTTGCTGCGAAC...AGCAAAAGAAACCTGCAAGATTAGAGTTATCTCTGAAGTGAAAGAGAACTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | CATGGTGAGTTTCTTGAATTTGGTGTGACTATTCAGCACTTCCCCAGAGAGAAAGATCTGGTATCTTGCTaGCACATAGTCGGCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HGEFLEFGVTIQHFPREKDLVSC*HIVGQV Trigger: TACTTGGCCGACTATGTGGCAGCAAGATACCAGATC...TTTCTCTCTGGGGAAGTGCTGAATAGTCACACCAAATTCAAGAAACTCACCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | CATGGTGAGTTTCTTGAATTTGGTGTGACTATTCAGCACTTCCCCAGAGAGAAATTCTTTGGCATGCCATaGTCTCCAAAGCCACCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HGEFLEFGVTIQHFPREKFFGMP*SPKPPV Trigger: TACAGGTGGCTTTGGAGACCATGGCATGCCAAAGAA...TTTCTCTCTGGGGAAGTGCTGAATAGTCACACCAAATTCAAGAAACTCACCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTATGGTTGTCTCGGTCTaGGCGGGTATGTTCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKDHYSTSPYMNLVYTVSMVVSV*AGMFMP Trigger: TGGCATGAACATACCCGCCCAGACCGAGACAACCAT...AGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTCTTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR TCA 90 bp | CATGGTGAGTTTCTTGAATTTGGTGTGACTATTCAGCACTTCCCCAGAGAGAAAAAGACCCACAGCTTTTaGACTGAGACCATCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HGEFLEFGVTIQHFPREKKTHSF*TETIKD Trigger: GTCTTTGATGGTCTCAGTTCAAAAGCTGTGGGTCTT...TTTCTCTCTGGGGAAGTGCTGAATAGTCACACCAAATTCAAGAAACTCACCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | AGCACAAACCTACATTTAAATGATGAACCACCTTCCAAAGACCACTATTCCACATTTCCAAAGGGGCTCTaGGTCAGGTCAATTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: STNLHLNDEPPSKDHYSTFPKGL*VRSIVL Trigger: CAGGACAATTGACCTGACCCAGAGCCCCTTTGGAAA...TGTGGAATAGTGGTCTTTGGAAGGTGGTTCATCATTTAAATGTAGGTTTGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | AGCACAAACCTACATTTAAATGATGAACCACCTTCCAAAGACCACTATTCCACAGCCATTTGGGAATCCTaGGGAAGAAAGGTTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: STNLHLNDEPPSKDHYSTAIWES*GRKVAT Trigger: AGTGGCAACCTTTCTTCCCCAGGATTCCCAAATGGC...TGTGGAATAGTGGTCTTTGGAAGGTGGTTCATCATTTAAATGTAGGTTTGTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | GACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTGACCTAAGTCATCGGGGTAATTaGGAGACTGAATCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DHYSTSPYMNLVYTVSDLSHRGN*ETESAL Trigger: AAGGGCAGATTCAGTCTCCCAATTACCCCGATGACT...TAGGTCAGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR TCA 90 bp | TCAGCACTTCCCCAGAGAGAAATGAGTTTACTAGTGAACTGGGTATTATCCAGTAGAAAATTGTACTCTTaGCCTGGCTGGATGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SALPQREMSLLVNWVLSSRKLYS*PGWMFS Trigger: AGAGAACATCCAGCCAGGTCAAGAGTACAATTTTCT...ACTGGATAATACCCAGTTCACTAGTAAACTCATTTCTCTCTGGGGAAGTGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | TACACTGTGTCTGACCTACAGAGTCTAAGCAAACATGCTAAGACCCAAGAAGTGTTCATCGTGTTATTTTaGTCCAAGCCAGAGCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: YTVSDLQSLSKHAKTQEVFIVLF*SKPEPI Trigger: AATTGGCTCTGGCTTGGAGCAAAATAACACGATGAA...CACTTCTTGGGTCTTAGCATGTTTGCTTAGACTCTGTAGGTCAGACACAGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | AGCACAAACCTACATTTAAATGATGAACCACCTTCCAAAGACCACTATTCCACAGGTCCGTTGACCAATTaGAGGACGAATGCCATTATC | + |
|
Preference number: 4 (lower is better) Translates to: STNLHLNDEPPSKDHYSTGPLTN*RTNAII Trigger: GATAATGGCATTCGTCCTGCAATTGGTCAACGGACC...TGTGGAATAGTGGTCTTTGGAAGGTGGTTCATCATTTAAATGTAGGTTTGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | GACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTGACCTACACACTCGGCTTCCTTaGAATCATGCTTGTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DHYSTSPYMNLVYTVSDLHTRLP*NHACSH Trigger: ATGAGAACAAGCATGATTGCAAGGAAGCCGAGTGTG...TAGGTCAGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTGGTGATGAGACCACTTaGGCTGTGTATCTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKDHYSTSPYMNLVYTVSGDETT*AVYLLF Trigger: GAACAGAAGATACACAGCCCAAGTGGTCTCATCACC...AGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTCTTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | TACACTGTGTCTGACCTACAGAGTCTAAGCAAACATGCTAAGACCCAAGAAGTGTCTACTTCGAATGTCTaGAAGGACAATTCAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YTVSDLQSLSKHAKTQEVSTSNV*KDNSSR Trigger: TCGACTTGAATTGTCCTTCCAGACATTCGAAGTAGA...CACTTCTTGGGTCTTAGCATGTTTGCTTAGACTCTGTAGGTCAGACACAGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| 3UTR CAA 72 bp | TCCAAAGACCACTATTCCACATCACCTTACATGAATTaGGTTTACACTGTGTCTGACCTACAGAGTCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKDHYSTSPYMN*VYTVSDLQSLS Trigger: GCTTAGACTCTGTAGGTCAGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTCTTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR TCA 90 bp | CATGGTGAGTTTCTTGAATTTGGTGTGACTATTCAGCACTTCCCCAGAGAGAAAGGATACAGTGTTGTCTaGCTTGAATTCAATCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HGEFLEFGVTIQHFPREKGYSVV*LEFNPH Trigger: ATGAGGATTGAATTCAAGTCAGACAACACTGTATCC...TTTCTCTCTGGGGAAGTGCTGAATAGTCACACCAAATTCAAGAAACTCACCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | AGCACAAACCTACATTTAAATGATGAACCACCTTCCAAAGACCACTATTCCACACTACCCAGTTACTGCTaGTACGAAACTCAATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: STNLHLNDEPPSKDHYSTLPSYC*YETQST Trigger: TGTGGATTGAGTTTCGTAGCAGCAGTAACTGGGTAG...TGTGGAATAGTGGTCTTTGGAAGGTGGTTCATCATTTAAATGTAGGTTTGTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | AGCACAAACCTACATTTAAATGATGAACCACCTTCCAAAGACCACTATTCCACAAAGAAAGGTTGCCACTaGATTCTTGCAGGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: STNLHLNDEPPSKDHYSTKKGCH*ILAGFL Trigger: GAGAAACCCTGCAAGAATCCAGTGGCAACCTTTCTT...TGTGGAATAGTGGTCTTTGGAAGGTGGTTCATCATTTAAATGTAGGTTTGTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR TCA 90 bp | TCCAAAGACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTTTATTATCACCAAACTaGGCATGGGAGTACAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKDHYSTSPYMNLVYTVSLLSPN*AWEYRS Trigger: AGACCTGTACTCCCATGCTCAGTTTGGTGATAATAA...AGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTCTTTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR GCA 90 bp | CATGGTGAGTTTCTTGAATTTGGTGTGACTATTCAGCACTTCCCCAGAGAGAAACGATTTTTCTCACTTTaGTCTGACAATTTTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HGEFLEFGVTIQHFPREKRFFSL*SDNFGG Trigger: ACCTCCAAAATTGTCAGAGCAAAGTGAGAAAAATCG...TTTCTCTCTGGGGAAGTGCTGAATAGTCACACCAAATTCAAGAAACTCACCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR TCA 90 bp | AGCACAAACCTACATTTAAATGATGAACCACCTTCCAAAGACCACTATTCCACACACAAGGCCTGTAGGTaGACACAATATAACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: STNLHLNDEPPSKDHYSTHKACR*TQYNFL Trigger: AAGAAAGTTATATTGTGTTCACCTACAGGCCTTGTG...TGTGGAATAGTGGTCTTTGGAAGGTGGTTCATCATTTAAATGTAGGTTTGTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR TCA 90 bp | GGAAAGTTCTCTTTCACTTCAGAGATAACTCTAATCTTGCAGGTTTCTTTTGCTCCACAGCTTTTGAACTaGGACCATCAAAGACTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GKFSFTSEITLILQVSFAPQLLN*DHQRLQ Trigger: TTGAAGTCTTTGATGGTCTCAGTTCAAAAGCTGTGG...AGCAAAAGAAACCTGCAAGATTAGAGTTATCTCTGAAGTGAAAGAGAACTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR TCA 90 bp | GGAAAGTTCTCTTTCACTTCAGAGATAACTCTAATCTTGCAGGTTTCTTTTGCTTCATCTGTGTGGAAATaGATCAAAGCCACATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKFSFTSEITLILQVSFASSVWK*IKATSP Trigger: TGGAGATGTGGCTTTGATTCATTTCCACACAGATGA...AGCAAAAGAAACCTGCAAGATTAGAGTTATCTCTGAAGTGAAAGAGAACTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CCA 90 bp | GGAAAGTTCTCTTTCACTTCAGAGATAACTCTAATCTTGCAGGTTTCTTTTGCTACAGTCCAGTTGTCCTaGGTAGTTATTATCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GKFSFTSEITLILQVSFATVQLS*VVIITK Trigger: TTTGGTGATAATAACTACCCAGGACAACTGGACTGT...AGCAAAAGAAACCTGCAAGATTAGAGTTATCTCTGAAGTGAAAGAGAACTTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS TCA 90 bp | AGCTTTCTTGCTTGTGCAATGTCTCCTTTGCTTAACCGGGTCCGTTaGCCAATTGCAGGACGAATGCCATTATCATCACGGGAGGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SFLACAMSPLLNRVR*PIAGRMPLSSREGS Trigger: ACTCCCCTCCCGTGATGATAATGGCATTCGTCCTGCAATTGGTCAACGGACCCGGTTAAGCAAAGGAGACATTGCACAAGCAAGAAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | GCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCACCTGGGGAAGAAAGGTaGCCACTGGATTCTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AVVTGLRNIQAVIWKMAAPGEER*PLDSCR Trigger: CCTGCAAGAATCCAGTGGCAACCTTTCTTCCCCAGG...TGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | GCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCAAGGGGATCTGGTATCTaGCTGCCACATAGTCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AVVTGLRNIQAVIWKMAARGSGI*LPHSRP Trigger: TGGCCGACTATGTGGCAGCAAGATACCAGATCCCCT...TGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CCA 90 bp | ATGGTAGCCCTCGGACACCATTATTTTCCATACACACTCCTTCATTaGTCGGTAGTCATCGGGGTAATTGGGAGACTGAATCTGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MVALGHHYFPYTLLH*SVVIGVIGRLNLPF Trigger: GAAGGGCAGATTCAGTCTCCCAATTACCCCGATGACTACCGACCAATGAAGGAGTGTGTATGGAAAATAATGGTGTCCGAGGGCTACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | CATGGTGAGTTTCTTGAATTTGGTGTGACTATTCAGCACTTCCCCAGAGAGAAAGTGCCCCTCGCTTCTTaGGCATGCCATGGTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HGEFLEFGVTIQHFPREKVPLAS*ACHGLQ Trigger: TTGGAGACCATGGCATGCCAAAGAAGCGAGGGGCAC...TTTCTCTCTGGGGAAGTGCTGAATAGTCACACCAAATTCAAGAAACTCACCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | GCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCAGTTGCCACTGGATTCTaGCAGGGTTTCTCCACATGC | + |
|
Preference number: 5 (lower is better) Translates to: AVVTGLRNIQAVIWKMAAVATGF*QGFSTC Trigger: GCATGTGGAGAAACCCTGCAAGAATCCAGTGGCAAC...TGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | AGCAGCAGCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATCCTCCTCGGTCAGGTTaGGCACACTCATCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSNWTKKHPGSHLEDPPRSG*AHSSSS Trigger: AGAGGAAGATGAGTGTGCCAAACCTGACCGAGGAGG...ATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGCTGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | GTGTCTGACCTACAGAGTCTAAGCAAACATGCTAAGACCCAAGAAGTGGGTTTCAGATTCTGTACTGGCTaGGCGCGATCACTTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VSDLQSLSKHAKTQEVGFRFCTG*ARSLAT Trigger: TGTGGCAAGTGATCGCGCCAAGCCAGTACAGAATCT...GAAACCCACTTCTTGGGTCTTAGCATGTTTGCTTAGACTCTGTAGGTCAGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | GCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCATACTTGTCTGGCCAGTaGGGACTGGTGATGAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: AVVTGLRNIQAVIWKMAAYLSGQ*GLVMRP Trigger: TGGTCTCATCACCAGTCCCAACTGGCCAGACAAGTA...TGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS TCA 90 bp | GTGGCCCTGACCCACAGAATCTACCAAGACCCACAGCTTTTGAACTaGGACCATCAAAGACTTCAACATAGTCATAGCCACAGTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VALTHRIYQDPQLLN*DHQRLQHSHSHSQL Trigger: AAGCTGACTGTGGCTATGACTATGTTGAAGTCTTTGATGGTCTCAGTTCAAAAGCTGTGGGTCTTGGTAGATTCTGTGGGTCAGGGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS GCA 90 bp | TGTCTCCTTTGCTTAACCGGGTCCGTTGACCAATTGCAGGACGAATaGCATTATCATCACGGGAGGGGAGTATTGTGTCTAAAAACATCC | + |
|
Preference number: 5 (lower is better) Translates to: CLLCLTGSVDQLQDE*HYHHGRGVLCLKTS Trigger: GGATGTTTTTAGACACAATACTCCCCTCCCGTGATGATAATGGCATTCGTCCTGCAATTGGTCAACGGACCCGGTTAAGCAAAGGAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS GCA 90 bp | ATGCTGGGCATCGATACAGCTTTCTTGCTTGTGCAATGTCTCCTTTaGTTAACCGGGTCCGTTGACCAATTGCAGGACGAATGCCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: MLGIDTAFLLVQCLL*LTGSVDQLQDECHY Trigger: ATAATGGCATTCGTCCTGCAATTGGTCAACGGACCCGGTTAAGCAAAGGAGACATTGCACAAGCAAGAAAGCTGTATCGATGCCCAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | GCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCAAGGAAGGGTAGCCATTaGGGAATCCTGGGGAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AVVTGLRNIQAVIWKMAARKGSH*GILGKK Trigger: TTTCTTCCCCAGGATTCCCAAATGGCTACCCTTCCT...TGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTTTTGGAGGGTACTCTTaGGGCCAGCCGGGGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SKDHYSTSPYMNLVYTVSFGGYS*GQPGVV Trigger: AACCACCCCCGGCTGGCCCAAAGAGTACCCTCCAAA...AGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTCTTTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | GCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCAGCTTGGCGCGATCACTaGCCACACACAGTTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AVVTGLRNIQAVIWKMAAAWRDH*PHTVFV Trigger: AACAAAAACTGTGTGTGGCAAGTGATCGCGCCAAGC...TGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS TCA 90 bp | GTTATTATCACCAAACTGAGCATGGGAGTACAGGTCTCTAGGCTTTaGCTCTGCTTTCAATCGACCACCACACTCTGTGGAATGTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VIITKLSMGVQVSRL*LCFQSTTTLCGMCS Trigger: GCTACACATTCCACAGAGTGTGGTGGTCGATTGAAAGCAGAGTCAAAGCCTAGAGACCTGTACTCCCATGCTCAGTTTGGTGATAATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CCA 90 bp | TCTTCTGATCCTCTCTATAAGTTGGTAGAGTGCCCCTCGCTTCTTTaGCATGCCATGGTCTCCAAAGCCACCTGTAATATGTCCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSDPLYKLVECPSLL*HAMVSKATCNMSKF Trigger: AAACTTGGACATATTACAGGTGGCTTTGGAGACCATGGCATGCCAAAGAAGCGAGGGGCACTCTACCAACTTATAGAGAGGATCAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | TACACTGTGTCTGACCTACAGAGTCTAAGCAAACATGCTAAGACCCAAGAAGTGAGAACTCCAGCCACTTaGTCCCCACAGAATCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: YTVSDLQSLSKHAKTQEVRTPAT*SPQNLP Trigger: TGGTAGATTCTGTGGGGACAAAGTGGCTGGAGTTCT...CACTTCTTGGGTCTTAGCATGTTTGCTTAGACTCTGTAGGTCAGACACAGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | AGCAGCAGCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATTCTATAGGCTCCGTTTaGTCCTCTTCGTTCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSNWTKKHPGSHLEDSIGSV*SSSFPS Trigger: TGATGGGAACGAAGAGGACAAAACGGAGCCTATAGA...ATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGCTGCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | GCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCATCTGGGTCAGGTCAATaGTCCTGTCTATTTGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AVVTGLRNIQAVIWKMAASGSGQ*SCLFGR Trigger: TCTTCCAAATAGACAGGACAATTGACCTGACCCAGA...TGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | TCAGCACTTCCCCAGAGAGAAATGAGTTTACTAGTGAACTGGGTATTATCCAGTGATCCTCTCTATAAGTaGGTAGAGTGCCCCTCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SALPQREMSLLVNWVLSSDPLYK*VECPSL Trigger: AAGCGAGGGGCACTCTACCAACTTATAGAGAGGATC...ACTGGATAATACCCAGTTCACTAGTAAACTCATTTCTCTCTGGGGAAGTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | CATGGTGAGTTTCTTGAATTTGGTGTGACTATTCAGCACTTCCCCAGAGAGAAACACGGGAGGGGAGTATaGTGTCTAAAAACATCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HGEFLEFGVTIQHFPREKHGRGV*CLKTSL Trigger: GAGGGATGTTTTTAGACACAATACTCCCCTCCCGTG...TTTCTCTCTGGGGAAGTGCTGAATAGTCACACCAAATTCAAGAAACTCACCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | GGAAAGTTCTCTTTCACTTCAGAGATAACTCTAATCTTGCAGGTTTCTTTTGCTGCAGCAAACCCTGCCTaGTTCACAGTCCCGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GKFSFTSEITLILQVSFAAANPA*FTVPSE Trigger: CTCTGACGGGACTGTGAACAAGGCAGGGTTTGCTGC...AGCAAAAGAAACCTGCAAGATTAGAGTTATCTCTGAAGTGAAAGAGAACTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | GCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCATGCCACACACAGTTTTaGTTTGGAGGGTACTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AVVTGLRNIQAVIWKMAACHTQF*FGGYSL Trigger: CAAAGAGTACCCTCCAAACAAAAACTGTGTGTGGCA...TGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | GCAGTAGTAACTGGACTAAGAAACATCCAGGCAGTCATTTGGAAGATGGCTGCAAGCCACCATTATCCTTaGAACACTCATCCTTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: AVVTGLRNIQAVIWKMAASHHYP*NTHPYL Trigger: CAGATAAGGATGAGTGTTCAAAGGATAATGGTGGCT...TGCAGCCATCTTCCAAATGACTGCCTGGATGTTTCTTAGTCCAGTTACTACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | GACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTGACCTACTAAAAACATCCCTCTaGAGAAGGTGTTCCTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: DHYSTSPYMNLVYTVSDLLKTSL*RRCSWR Trigger: ACGCCAGGAACACCTTCTCAAGAGGGATGTTTTTAG...TAGGTCAGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | GTGTCTGACCTACAGAGTCTAAGCAAACATGCTAAGACCCAAGAAGTGGGTTTCTCAATCCTCATGTTGTaGAAATGGGAAGTCATCACT | + |
|
Preference number: 5 (lower is better) Translates to: VSDLQSLSKHAKTQEVGFSILML*KWEVIT Trigger: AGTGATGACTTCCCATTTCAACAACATGAGGATTGA...GAAACCCACTTCTTGGGTCTTAGCATGTTTGCTTAGACTCTGTAGGTCAGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | TCAGCACTTCCCCAGAGAGAAATGAGTTTACTAGTGAACTGGGTATTATCCAGTCCATTCACAGTCCAGTaGTCCTGGGTAGTTATTATC | + |
|
Preference number: 5 (lower is better) Translates to: SALPQREMSLLVNWVLSSPFTVQ*SWVVII Trigger: GATAATAACTACCCAGGACAACTGGACTGTGAATGG...ACTGGATAATACCCAGTTCACTAGTAAACTCATTTCTCTCTGGGGAAGTGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CCA 90 bp | TCTCCAAAGCCACCTGTAATATGTCCAAGTTTTCCAAAGGGGCTCTaGGTCAGGTCAATTGTCCTGTCTATTTGGAAGATATTTAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPKPPVICPSFPKGL*VRSIVLSIWKIFKS Trigger: AGACTTAAATATCTTCCAAATAGACAGGACAATTGACCTGACCCAGAGCCCCTTTGGAAAACTTGGACATATTACAGGTGGCTTTGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | TCAGCACTTCCCCAGAGAGAAATGAGTTTACTAGTGAACTGGGTATTATCCAGTATCGATACAGCTTTCTaGCTTGTGCAATGTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SALPQREMSLLVNWVLSSIDTAF*LVQCLL Trigger: AAGGAGACATTGCACAAGCAAGAAAGCTGTATCGAT...ACTGGATAATACCCAGTTCACTAGTAAACTCATTTCTCTCTGGGGAAGTGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | GGAAAGTTCTCTTTCACTTCAGAGATAACTCTAATCTTGCAGGTTTCTTTTGCTGTGGTTATGGTGCCATaGAGCTTCGTCAGAAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GKFSFTSEITLILQVSFAVVMVP*SFVRSP Trigger: AGGACTTCTGACGAAGCTCAATGGCACCATAACCAC...AGCAAAAGAAACCTGCAAGATTAGAGTTATCTCTGAAGTGAAAGAGAACTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTTCACACTCGGCTTCCTaGCAATCATGCTTGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SKDHYSTSPYMNLVYTVSSHSAS*QSCLFS Trigger: TGAGAACAAGCATGATTGCAAGGAAGCCGAGTGTGA...AGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTCTTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | CATGGTGAGTTTCTTGAATTTGGTGTGACTATTCAGCACTTCCCCAGAGAGAAATGTGGAATGTGTAGCTaGAAAGCCTTTTCTTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HGEFLEFGVTIQHFPREKCGMCS*KAFSLN Trigger: GTTCAAAGAAAAGGCTTTCAAGCTACACATTCCACA...TTTCTCTCTGGGGAAGTGCTGAATAGTCACACCAAATTCAAGAAACTCACCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | AGCACAAACCTACATTTAAATGATGAACCACCTTCCAAAGACCACTATTCCACAATACAGCTTTCTTGCTaGTGCAATGTCTCCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: STNLHLNDEPPSKDHYSTIQLSC*CNVSFA Trigger: AGCAAAGGAGACATTGCACAAGCAAGAAAGCTGTAT...TGTGGAATAGTGGTCTTTGGAAGGTGGTTCATCATTTAAATGTAGGTTTGTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | CATGGTGAGTTTCTTGAATTTGGTGTGACTATTCAGCACTTCCCCAGAGAGAAATTGAAAGCCTTTTCTTaGAACAGAGGCATCAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HGEFLEFGVTIQHFPREKLKAFS*NRGIRN Trigger: ATTTCTGATGCCTCTGTTCAAAGAAAAGGCTTTCAA...TTTCTCTCTGGGGAAGTGCTGAATAGTCACACCAAATTCAAGAAACTCACCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | GACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTGACCTAAAGCCACATCTCCAATaGAATAGATTTCTTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DHYSTSPYMNLVYTVSDLKPHLQ*NRFLLV Trigger: CACCAGAAGAAATCTATTCAATTGGAGATGTGGCTT...TAGGTCAGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTACAGTGTTGTCTGACTaGAATTCAATCCTCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SKDHYSTSPYMNLVYTVSTVLSD*NSILML Trigger: CAACATGAGGATTGAATTCAAGTCAGACAACACTGT...AGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTCTTTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGACCACTATTCCACATCACCTTACATGAATTTGGTTTACACTGTGTCTTTCTTGGATACAGTGTaGTCTGACTTGAATTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: SKDHYSTSPYMNLVYTVSFLDTV*SDLNSI Trigger: GATTGAATTCAAGTCAGACAACACTGTATCCAAGAA...AGACACAGTGTAAACCAAATTCATGTAAGGTGATGTGGAATAGTGGTCTTTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 90 bp | TCACAGACACTCTCCAGATGCAGTGTGTGTAGGAAGGGTAGCCATTaGGGAATCCTGGGGAAGAAAGGTTGCCACTGGATTCTTGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SQTLSRCSVCRKGSH*GILGKKGCHWILAG Trigger: CCCTGCAAGAATCCAGTGGCAACCTTTCTTCCCCAGGATTCCCAAATGGCTACCCTTCCTACACACACTGCATCTGGAGAGTGTCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS GCA 72 bp | ATCACTTCAGGTATGTCAGCGCCACAGAACTTGCCATaGAGTTTAGACTCAGAGGAAAGGCCGCTCCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: ITSGMSAPQNLP*SLDSEERPLQI Trigger: GATCTGGAGCGGCCTTTCCTCTGAGTCTAAACTGCATGGCAAGTTCTGTGGCGCTGACATACCTGAAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CCA 72 bp | AACCACAGAACCGTCCTATCAAAGGGCTGTTCTCACTaGCTCCATCTCGAACTTCTAGGTGGTCATAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: NHRTVLSKGCSH*LHLELLGGHRH Trigger: GTGCCTATGACCACCTAGAAGTTCGAGATGGAGCCAGTGAGAACAGCCCTTTGATAGGACGGTTCTGTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 72 bp | CAATGTCTCCTTTGCTTAACCGGGTCCGTTGACCAATaGCAGGACGAATGCCATTATCATCACGGGAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: QCLLCLTGSVDQ*QDECHYHHGRG Trigger: TCCCCTCCCGTGATGATAATGGCATTCGTCCTGCAATTGGTCAACGGACCCGGTTAAGCAAAGGAGACATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 72 bp | GGGTTTCTCCACATGCTGGGCATCGATACAGCTTTCTaGCTTGTGCAATGTCTCCTTTGCTTAACCGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GFLHMLGIDTAF*LVQCLLCLTGS Trigger: GGACCCGGTTAAGCAAAGGAGACATTGCACAAGCAAGAAAGCTGTATCGATGCCCAGCATGTGGAGAAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 72 bp | GAAGTCATCACTTCAGGTATGTCAGCGCCACAGAACTaGCCATGCAGTTTAGACTCAGAGGAAAGGCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: EVITSGMSAPQN*PCSLDSEERPL Trigger: GAGCGGCCTTTCCTCTGAGTCTAAACTGCATGGCAAGTTCTGTGGCGCTGACATACCTGAAGTGATGACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 90 bp | TTGAAATGGGAAGTCATCACTTCAGGTATGTCAGCGCCACAGAACTaGCCATGCAGTTTAGACTCAGAGGAAAGGCCGCTCCAGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LKWEVITSGMSAPQN*PCSLDSEERPLQIS Trigger: GGAGATCTGGAGCGGCCTTTCCTCTGAGTCTAAACTGCATGGCAAGTTCTGTGGCGCTGACATACCTGAAGTGATGACTTCCCATTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS TCA 72 bp | GCTTGTGCAATGTCTCCTTTGCTTAACCGGGTCCGTTaGCCAATTGCAGGACGAATGCCATTATCATCACGG | + |
|
Preference number: 6 (lower is better) Translates to: ACAMSPLLNRVR*PIAGRMPLSSR Trigger: CCGTGATGATAATGGCATTCGTCCTGCAATTGGTCAACGGACCCGGTTAAGCAAAGGAGACATTGCACAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS TCA 72 bp | ACCAAACTGAGCATGGGAGTACAGGTCTCTAGGCTTTaGCTCTGCTTTCAATCGACCACCACACTCTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: TKLSMGVQVSRL*LCFQSTTTLCG Trigger: TCCACAGAGTGTGGTGGTCGATTGAAAGCAGAGTCAAAGCCTAGAGACCTGTACTCCCATGCTCAGTTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS GCA 72 bp | TGCTTAACCGGGTCCGTTGACCAATTGCAGGACGAATaGCATTATCATCACGGGAGGGGAGTATTGTGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: CLTGSVDQLQDE*HYHHGRGVLCL Trigger: TAGACACAATACTCCCCTCCCGTGATGATAATGGCATTCGTCCTGCAATTGGTCAACGGACCCGGTTAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 90 bp | TTGCTTGTGCAATGTCTCCTTTGCTTAACCGGGTCCGTTGACCAATaGCAGGACGAATGCCATTATCATCACGGGAGGGGAGTATTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLVQCLLCLTGSVDQ*QDECHYHHGRGVLC Trigger: ACACAATACTCCCCTCCCGTGATGATAATGGCATTCGTCCTGCAATTGGTCAACGGACCCGGTTAAGCAAAGGAGACATTGCACAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 90 bp | CATGGTAGCCCTCGGACACCATTATTTTCCATACACACTCCTTCATaGGTCGGTAGTCATCGGGGTAATTGGGAGACTGAATCTGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: HGSPRTPLFSIHTPS*VGSHRGNWETESAL Trigger: AAGGGCAGATTCAGTCTCCCAATTACCCCGATGACTACCGACCAATGAAGGAGTGTGTATGGAAAATAATGGTGTCCGAGGGCTACCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 90 bp | ATGAGACCACTTGGGCTGTGTATCTTCTGTTCACACTCGGCTTCCTaGCAATCATGCTTGTTCTCATGCAACACGAATCCATTCCGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: MRPLGLCIFCSHSAS*QSCLFSCNTNPFRH Trigger: GTGCCGGAATGGATTCGTGTTGCATGAGAACAAGCATGATTGCAAGGAAGCCGAGTGTGAACAGAAGATACACAGCCCAAGTGGTCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 72 bp | ATTTCATTCCCAGTAGCCATGAGGGGATCTGGTATCTaGCTGCCACATAGTCGGCCAAGTATTGGTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: ISFPVAMRGSGI*LPHSRPSIGDF Trigger: GAAGTCACCAATACTTGGCCGACTATGTGGCAGCAAGATACCAGATCCCCTCATGGCTACTGGGAATGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 90 bp | GACCAATTGCAGGACGAATGCCATTATCATCACGGGAGGGGAGTATaGTGTCTAAAAACATCCCTCTTGAGAAGGTGTTCCTGGCGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: DQLQDECHYHHGRGV*CLKTSLLRRCSWRS Trigger: ACTACGCCAGGAACACCTTCTCAAGAGGGATGTTTTTAGACACAATACTCCCCTCCCGTGATGATAATGGCATTCGTCCTGCAATTGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 90 bp | CGAATAAACATTTCATTCCCAGTAGCCATGAGGGGATCTGGTATCTaGCTGCCACATAGTCGGCCAAGTATTGGTGACTTCTCCGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RINISFPVAMRGSGI*LPHSRPSIGDFSVS Trigger: AGAAACGGAGAAGTCACCAATACTTGGCCGACTATGTGGCAGCAAGATACCAGATCCCCTCATGGCTACTGGGAATGAAATGTTTATTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS GCA 72 bp | ATCGATACAGCTTTCTTGCTTGTGCAATGTCTCCTTTaGTTAACCGGGTCCGTTGACCAATTGCAGGACGAA | + |
|
Preference number: 6 (lower is better) Translates to: IDTAFLLVQCLL*LTGSVDQLQDE Trigger: TTCGTCCTGCAATTGGTCAACGGACCCGGTTAAGCAAAGGAGACATTGCACAAGCAAGAAAGCTGTATCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS GCA 72 bp | TGTATCTTCTGTTCACACTCGGCTTCCTTGCAATCATaGTTGTTCTCATGCAACACGAATCCATTCCGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: CIFCSHSASLQS*LFSCNTNPFRH Trigger: GTGCCGGAATGGATTCGTGTTGCATGAGAACAAGCATGATTGCAAGGAAGCCGAGTGTGAACAGAAGATACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CCA 72 bp | CACACTCCTTCATTGGTCGGTAGTCATCGGGGTAATTaGGAGACTGAATCTGCCCTTCGTTTTTCCTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: HTPSLVGSHRGN*ETESALRFSLS Trigger: AGATAAGGAAAAACGAAGGGCAGATTCAGTCTCCCAATTACCCCGATGACTACCGACCAATGAAGGAGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 72 bp | CAGGACGAATGCCATTATCATCACGGGAGGGGAGTATaGTGTCTAAAAACATCCCTCTTGAGAAGGTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QDECHYHHGRGV*CLKTSLLRRCS Trigger: GGAACACCTTCTCAAGAGGGATGTTTTTAGACACAATACTCCCCTCCCGTGATGATAATGGCATTCGTCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 72 bp | CCTCGGACACCATTATTTTCCATACACACTCCTTCATaGGTCGGTAGTCATCGGGGTAATTGGGAGACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PRTPLFSIHTPS*VGSHRGNWETE Trigger: TTCAGTCTCCCAATTACCCCGATGACTACCGACCAATGAAGGAGTGTGTATGGAAAATAATGGTGTCCGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CCA 72 bp | CTCGGACACCATTATTTTCCATACACACTCCTTCATTaGTCGGTAGTCATCGGGGTAATTGGGAGACTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LGHHYFPYTLLH*SVVIGVIGRLN Trigger: ATTCAGTCTCCCAATTACCCCGATGACTACCGACCAATGAAGGAGTGTGTATGGAAAATAATGGTGTCCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 90 bp | CCCTTCTTGGATACAGTGTTGTCTGACTTGAATTCAATCCTCATGTaGTTGAAATGGGAAGTCATCACTTCAGGTATGTCAGCGCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: PFLDTVLSDLNSILM*LKWEVITSGMSAPQ Trigger: CTGTGGCGCTGACATACCTGAAGTGATGACTTCCCATTTCAACAACATGAGGATTGAATTCAAGTCAGACAACACTGTATCCAAGAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS TCA 72 bp | ACCCACAGAATCTACCAAGACCCACAGCTTTTGAACTaGGACCATCAAAGACTTCAACATAGTCATAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: THRIYQDPQLLN*DHQRLQHSHSH Trigger: GTGGCTATGACTATGTTGAAGTCTTTGATGGTCTCAGTTCAAAAGCTGTGGGTCTTGGTAGATTCTGTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 72 bp | GATCTGGTATCTTGCTGCCACATAGTCGGCCAAGTATaGGTGACTTCTCCGTTTCTCCATCAAAAATTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: DLVSCCHIVGQV*VTSPFLHQKFP Trigger: TGGAAATTTTTGATGGAGAAACGGAGAAGTCACCAATACTTGGCCGACTATGTGGCAGCAAGATACCAGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 90 bp | TTCTTGGATACAGTGTTGTCTGACTTGAATTCAATCCTCATGTTGTaGAAATGGGAAGTCATCACTTCAGGTATGTCAGCGCCACAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FLDTVLSDLNSILML*KWEVITSGMSAPQN Trigger: GTTCTGTGGCGCTGACATACCTGAAGTGATGACTTCCCATTTCAACAACATGAGGATTGAATTCAAGTCAGACAACACTGTATCCAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 72 bp | ACAGTGTTGTCTGACTTGAATTCAATCCTCATGTTGTaGAAATGGGAAGTCATCACTTCAGGTATGTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: TVLSDLNSILML*KWEVITSGMSA Trigger: CGCTGACATACCTGAAGTGATGACTTCCCATTTCAACAACATGAGGATTGAATTCAAGTCAGACAACACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||
| CDS CAA 72 bp | GATACAGTGTTGTCTGACTTGAATTCAATCCTCATGTaGTTGAAATGGGAAGTCATCACTTCAGGTATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: DTVLSDLNSILM*LKWEVITSGMS Trigger: TGACATACCTGAAGTGATGACTTCCCATTTCAACAACATGAGGATTGAATTCAAGTCAGACAACACTGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066166.6 |
||