Pregenerated sensors for TLK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020694Ensembl transcript IDs: ENSMUST00000092537.10, ENSMUST00000106939.9, ENSMUST00000145048.8
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGCCAGTGTATGTTCTCTGGGGCTTCTCCAGGCAGTGGAAAGATaGCGTGCGCAGATTCAAGCCAGACCAGGCAAGACTCAGACTGAT | + |
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Preference number: 1 (lower is better) Translates to: EASVCSLGLLQAVER*RAQIQARPGKTQTD Trigger: ATCAGTCTGAGTCTTGCCTGGTCTGGCTTGAATCTGCGCACGGCATCTTTCCACTGCCTGGAGAAGCCCCAGAGAACATACACTGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR CCA 90 bp | GAGGAAAAGAGGCCAGTGTATGTTCTCTGGGGCTTCTCCAGGCAGTaGAAAGATGCCGTGCGCAGATTCAAGCCAGACCAGGCAAGACTC | + |
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Preference number: 1 (lower is better) Translates to: EEKRPVYVLWGFSRQ*KDAVRRFKPDQARL Trigger: GAGTCTTGCCTGGTCTGGCTTGAATCTGCGCACGGCATCTTTCCACTGCCTGGAGAAGCCCCAGAGAACATACACTGGCCTCTTTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR CCA 90 bp | TTTACTGGCTCCTTCAAAGAGGAAAAGAGGCCAGTGTATGTTCTCTaGGGCTTCTCCAGGCAGTGGAAAGATGCCGTGCGCAGATTCAAG | + |
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Preference number: 1 (lower is better) Translates to: FTGSFKEEKRPVYVL*GFSRQWKDAVRRFK Trigger: CTTGAATCTGCGCACGGCATCTTTCCACTGCCTGGAGAAGCCCCAGAGAACATACACTGGCCTCTTTTCCTCTTTGAAGGAGCCAGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR GCA 90 bp | CATACGACAAAACCTACCTACAAGTTCCTTTGGTTTGGAATGCTCTaGCTTTCTTTAAGATCACTTGATACCAAGGAGTGTGGGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: HTTKPTYKFLWFGML*LSLRSLDTKECGAG Trigger: TCCTGCCCCACACTCCTTGGTATCAAGTGATCTTAAAGAAAGGCAGAGCATTCCAAACCAAAGGAACTTGTAGGTAGGTTTTGTCGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR CCA 90 bp | CTCTCCTCAGAGCACCATACGACAAAACCTACCTACAAGTTCCTTTaGTTTGGAATGCTCTGCCTTTCTTTAAGATCACTTGATACCAAG | + |
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Preference number: 1 (lower is better) Translates to: LSSEHHTTKPTYKFL*FGMLCLSLRSLDTK Trigger: CTTGGTATCAAGTGATCTTAAAGAAAGGCAGAGCATTCCAAACCAAAGGAACTTGTAGGTAGGTTTTGTCGTATGGTGCTCTGAGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR TCA 90 bp | CTTGGAGAAAGTGAAACTCATCTGACATCAGAGAAACCCACTCAATaGTTTTACTGGCTCCTTCAAAGAGGAAAAGAGGCCAGTGTATGT | + |
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Preference number: 1 (lower is better) Translates to: LGESETHLTSEKPTQ*FYWLLQRGKEASVC Trigger: ACATACACTGGCCTCTTTTCCTCTTTGAAGGAGCCAGTAAAATCATTGAGTGGGTTTCTCTGATGTCAGATGAGTTTCACTTTCTCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR CCA 90 bp | ACATGTCTTATATTTGAGATTGCAACATGCATGTCTCTGATGGCTTaGGAGAATTCAGTAGGTGCTCTTCAGCCTGGAATTTGTAGGTAT | + |
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Preference number: 1 (lower is better) Translates to: TCLIFEIATCMSLMA*ENSVGALQPGICRY Trigger: ATACCTACAAATTCCAGGCTGAAGAGCACCTACTGAATTCTCCCAAGCCATCAGAGACATGCATGTTGCAATCTCAAATATAAGACATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| 3UTR GCA 90 bp | ATTCACATCAGAATTAAAACATGTCTTATATTTGAGATTGCAACATaGATGTCTCTGATGGCTTGGGAGAATTCAGTAGGTGCTCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: IHIRIKTCLIFEIAT*MSLMAWENSVGALQ Trigger: CTGAAGAGCACCTACTGAATTCTCCCAAGCCATCAGAGACATGCATGTTGCAATCTCAAATATAAGACATGTTTTAATTCTGATGTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| 3UTR-3UTR TCA 90 bp | TATGTGTGGGTAATGGTAGTACCAAGGCAGGTATGTGGAGGTCAGAGGACAATTCGGGACCTTTTCCTATaGGGCCTGGCCAGAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: YVWVMVVPRQVCGGQRTIRDLFL*GLARAA Trigger: GGCAGCTCTGGCCAGGCCTCATAGGAAAAGGTCCCG...AATTGTCCTCTGACCTCCACATACCTGCCTTGGTACTACCATTACCCACACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR GCA 90 bp | GCGCAGATTCAAGCCAGACCAGGCAAGACTCAGACTGATTCACATGAGAAGGGATCCTGCAGAGTCATCTaGTGTTTCCAGGGCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: AQIQARPGKTQTDSHEKGSCRVI*CFQGTV Trigger: CACTGTGCCCTGGAAACAGCAGATGACTCTGCAGGA...TCCCTTCTCATGTGAATCAGTCTGAGTCTTGCCTGGTCTGGCTTGAATCTGCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR CCA 90 bp | TATGTGTGGGTAATGGTAGTACCAAGGCAGGTATGTGGAGGTCAGAGGACAATTGGCTTCTCCAGGCAGTaGAAAGATGCCGTGCGCAGA | + |
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Preference number: 2 (lower is better) Translates to: YVWVMVVPRQVCGGQRTIGFSRQ*KDAVRR Trigger: TCTGCGCACGGCATCTTTCCACTGCCTGGAGAAGCC...AATTGTCCTCTGACCTCCACATACCTGCCTTGGTACTACCATTACCCACACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR CCA 90 bp | TTATGTGTGGGTAATGGTAGTACCAAGGCAGGTATGTGGAGGTCAGAGGACAATCCAGTGTATGTTCTCTaGGGCTTCTCCAGGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: LCVGNGSTKAGMWRSEDNPVYVL*GFSRQW Trigger: CCACTGCCTGGAGAAGCCCCAGAGAACATACACTGG...ATTGTCCTCTGACCTCCACATACCTGCCTTGGTACTACCATTACCCACACATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR TCA 90 bp | ATTCAAGCCAGACCAGGCAAGACTCAGACTGATTCACATGAGAAGGGATGGCGCTTCTTTAAGATCACTTaGTACCAAGGAGTGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: IQARPGKTQTDSHEKGWRFFKIT*YQGVWG Trigger: GCCCCACACTCCTTGGTATCAAGTGATCTTAAAGAA...GCGCCATCCCTTCTCATGTGAATCAGTCTGAGTCTTGCCTGGTCTGGCTTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR GCA 90 bp | ATTCAAGCCAGACCAGGCAAGACTCAGACTGATTCACATGAGAAGGGATGGCGCACTAGAGGCATGAATTaGCTTAAGAGCTCTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: IQARPGKTQTDSHEKGWRTRGMN*LKSSAL Trigger: AAGGGCAGAGCTCTTAAGGCAATTCATGCCTCTAGT...GCGCCATCCCTTCTCATGTGAATCAGTCTGAGTCTTGCCTGGTCTGGCTTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR TCA 90 bp | ATTCAAGCCAGACCAGGCAAGACTCAGACTGATTCACATGAGAAGGGATGGCGCATGGTTAGCAAGAAATaGGCAAGAAGATTGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: IQARPGKTQTDSHEKGWRMVSKK*ARRLWA Trigger: TGCCCACAATCTTCTTGCTCATTTCTTGCTAACCAT...GCGCCATCCCTTCTCATGTGAATCAGTCTGAGTCTTGCCTGGTCTGGCTTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR TCA 90 bp | ATTCAAGCCAGACCAGGCAAGACTCAGACTGATTCACATGAGAAGGGATGGCGCGAAAAGCCCATGTGTTaGTCGAGTTTAATGGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: IQARPGKTQTDSHEKGWREKPMC*SSLMVS Trigger: GCTAACCATTAAACTCGATCAACACATGGGCTTTTC...GCGCCATCCCTTCTCATGTGAATCAGTCTGAGTCTTGCCTGGTCTGGCTTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR GCA 90 bp | CAAGACAGACGTGATGTCATACCAGCATTCAAGAGGTTGAGGCACAGGGATTGCGGAGAATTCAGTAGGTaGTCTTCAGCCTGGAATTTG | + |
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Preference number: 2 (lower is better) Translates to: QDRRDVIPAFKRLRHRDCGEFSR*SSAWNL Trigger: CAAATTCCAGGCTGAAGAGCACCTACTGAATTCTCC...GCAATCCCTGTGCCTCAACCTCTTGAATGCTGGTATGACATCACGTCTGTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| 3UTR-3UTR GCA 90 bp | ATATTCACCACAATTCAAATGCCTGAGAGAGGATTTGTTCTCCTCAAAGATCTAAGGCCTGGCCAGAGCTaGCCAAGGCTTCTCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: IFTTIQMPERGFVLLKDLRPGQS*PRLLLS Trigger: ACTGAGGAGAAGCCTTGGGCAGCTCTGGCCAGGCCT...TAGATCTTTGAGGAGAACAAATCCTCTCTCAGGCATTTGAATTGTGGTGAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR GCA 90 bp | CAAGACAGACGTGATGTCATACCAGCATTCAAGAGGTTGAGGCACAGGGATTGCTTTGAGATTGCAACATaGATGTCTCTGATGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: QDRRDVIPAFKRLRHRDCFEIAT*MSLMAW Trigger: CCAAGCCATCAGAGACATGCATGTTGCAATCTCAAA...GCAATCCCTGTGCCTCAACCTCTTGAATGCTGGTATGACATCACGTCTGTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| 3UTR-3UTR TCA 90 bp | GCGCAGATTCAAGCCAGACCAGGCAAGACTCAGACTGATTCACATGAGAAGGGACATGTTTTTAGAAACTaGGATTATTCAGGGCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: AQIQARPGKTQTDSHEKGHVFRN*DYSGLA Trigger: TGCTAGCCCTGAATAATCTCAGTTTCTAAAAACATG...TCCCTTCTCATGTGAATCAGTCTGAGTCTTGCCTGGTCTGGCTTGAATCTGCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR TCA 90 bp | TATGTGTGGGTAATGGTAGTACCAAGGCAGGTATGTGGAGGTCAGAGGACAATTACACCTTGGAGAAAGTaGAACTCATCTGACATCAGA | + |
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Preference number: 2 (lower is better) Translates to: YVWVMVVPRQVCGGQRTITPWRK*NSSDIR Trigger: TCTGATGTCAGATGAGTTTCACTTTCTCCAAGGTGT...AATTGTCCTCTGACCTCCACATACCTGCCTTGGTACTACCATTACCCACACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR GCA 90 bp | TATGTGTGGGTAATGGTAGTACCAAGGCAGGTATGTGGAGGTCAGAGGACAATTAGGGGTGAAGGAAGCTaGATGTTTTTAGAAACTGAG | + |
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Preference number: 2 (lower is better) Translates to: YVWVMVVPRQVCGGQRTIRGEGS*MFLETE Trigger: CTCAGTTTCTAAAAACATGCAGCTTCCTTCACCCCT...AATTGTCCTCTGACCTCCACATACCTGCCTTGGTACTACCATTACCCACACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR GCA 90 bp | TATGTGTGGGTAATGGTAGTACCAAGGCAGGTATGTGGAGGTCAGAGGACAATTTCACCACAATTCAAATaGCTGAGAGAGGATTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: YVWVMVVPRQVCGGQRTISPQFK*LREDLF Trigger: GAACAAATCCTCTCTCAGGCATTTGAATTGTGGTGA...AATTGTCCTCTGACCTCCACATACCTGCCTTGGTACTACCATTACCCACACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR CCA 90 bp | TTATGTGTGGGTAATGGTAGTACCAAGGCAGGTATGTGGAGGTCAGAGGACAATCAAGTTCCTTTGGTTTaGAATGCTCTGCCTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LCVGNGSTKAGMWRSEDNQVPLV*NALPFF Trigger: AAAGAAAGGCAGAGCATTCCAAACCAAAGGAACTTG...ATTGTCCTCTGACCTCCACATACCTGCCTTGGTACTACCATTACCCACACATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR TCA 90 bp | CATCAGAGAAACCCACTCAATGATTTTACTGGCTCCTTCAAAGAGGAAAAGAGGCACAATTCAAATGCCTaGGAGAGGATTTGTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: HQRNPLNDFTGSFKEEKRHNSNA*ERICSP Trigger: AGGAGAACAAATCCTCTCTCAGGCATTTGAATTGTG...CCTCTTTTCCTCTTTGAAGGAGCCAGTAAAATCATTGAGTGGGTTTCTCTGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR GCA 72 bp | TTCTCTGGGGCTTCTCCAGGCAGTGGAAAGATGCCGTaGGCAGATTCAAGCCAGACCAGGCAAGACTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: FSGASPGSGKMP*ADSSQTRQDSD Trigger: GTCTGAGTCTTGCCTGGTCTGGCTTGAATCTGCGCACGGCATCTTTCCACTGCCTGGAGAAGCCCCAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR CCA 72 bp | AGGCCAGTGTATGTTCTCTGGGGCTTCTCCAGGCAGTaGAAAGATGCCGTGCGCAGATTCAAGCCAGACCAG | + |
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Preference number: 3 (lower is better) Translates to: RPVYVLWGFSRQ*KDAVRRFKPDQ Trigger: CTGGTCTGGCTTGAATCTGCGCACGGCATCTTTCCACTGCCTGGAGAAGCCCCAGAGAACATACACTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR GCA 72 bp | TGCCTTAAGAGCTCTGCCCTTCCTGACTCCCGCCCCTaGTCTGATCTCTCCAGCTCTAAGTATTTCTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: CLKSSALPDSRP*SDLSSSKYFWL Trigger: CAGCCAGAAATACTTAGAGCTGGAGAGATCAGAGCAGGGGCGGGAGTCAGGAAGGGCAGAGCTCTTAAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR CAA 90 bp | GCGCAGATTCAAGCCAGACCAGGCAAGACTCAGACTGATTCACATGAGAAGGGAAGGCTAGAGCTGCACTaGCCTGGCATACGGAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: AQIQARPGKTQTDSHEKGRLELH*PGIRKV Trigger: GACCTTCCGTATGCCAGGCAAGTGCAGCTCTAGCCT...TCCCTTCTCATGTGAATCAGTCTGAGTCTTGCCTGGTCTGGCTTGAATCTGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR CAA 90 bp | TTCAAGAGGTTGAGGCACAGGGATTGCCTTGAGTCTGAGGTCAGCCTCTGCTACCATGTCTCTGATGGCTaGGGAGAATTCAGTAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: FKRLRHRDCLESEVSLCYHVSDG*GEFSRC Trigger: GCACCTACTGAATTCTCCCAAGCCATCAGAGACATG...GTAGCAGAGGCTGACCTCAGACTCAAGGCAATCCCTGTGCCTCAACCTCTTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| 3UTR TCA 72 bp | AGGAACACTTTTAGCAAGCACAGAGCACTAGAGGCATaGATTGCCTTAAGAGCTCTGCCCTTCCTGACTCCC | + |
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Preference number: 3 (lower is better) Translates to: RNTFSKHRALEA*IALRALPFLTP Trigger: GGGAGTCAGGAAGGGCAGAGCTCTTAAGGCAATTCATGCCTCTAGTGCTCTGTGCTTGCTAAAAGTGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR GCA 72 bp | GTCATACCAGCATTCAAGAGGTTGAGGCACAGGGATTaGCTTGAGTCTGAGGTCAGCCTCTGCTACGTATAT | + |
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Preference number: 3 (lower is better) Translates to: VIPAFKRLRHRD*LESEVSLCYVY Trigger: ATATACGTAGCAGAGGCTGACCTCAGACTCAAGGCAATCCCTGTGCCTCAACCTCTTGAATGCTGGTATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| 3UTR TCA 72 bp | AGAGGTAGGACAATCTCTGTAAGTTTAAGGCCGGCCTaGTCTAAACATAGACAACTCCAAACCAGCCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: RGRTISVSLRPA*SKHRQLQTSQG Trigger: GCCCTGGCTGGTTTGGAGTTGTCTATGTTTAGATCAGGCCGGCCTTAAACTTACAGAGATTGTCCTACCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145048.8 |
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| 3UTR CCA 72 bp | TTCTTTGGTCACTGTATTACAGGAAGAGTCCAGCCATaGGCCACATGTGTCCCAGAACAGTCAGGAATGCAA | + |
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Preference number: 3 (lower is better) Translates to: FFGHCITGRVQP*ATCVPEQSGMQ Trigger: TTGCATTCCTGACTGTTCTGGGACACATGTGGCCCATGGCTGGACTCTTCCTGTAATACAGTGACCAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR CAA 90 bp | TTATGTGTGGGTAATGGTAGTACCAAGGCAGGTATGTGGAGGTCAGAGGACAATAGCAAGTTCCTTTACTaGCTAAGCCATCTCATCACC | + |
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Preference number: 3 (lower is better) Translates to: LCVGNGSTKAGMWRSEDNSKFLY*LSHLIT Trigger: GGTGATGAGATGGCTTAGCAAGTAAAGGAACTTGCT...ATTGTCCTCTGACCTCCACATACCTGCCTTGGTACTACCATTACCCACACATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR-3UTR CAA 90 bp | TTATGTGTGGGTAATGGTAGTACCAAGGCAGGTATGTGGAGGTCAGAGGACAATGCCCTATATCCAATGTaGGAAAAGGCCAAAACAGTA | + |
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Preference number: 3 (lower is better) Translates to: LCVGNGSTKAGMWRSEDNALYPM*EKAKTV Trigger: TACTGTTTTGGCCTTTTCCAACATTGGATATAGGGC...ATTGTCCTCTGACCTCCACATACCTGCCTTGGTACTACCATTACCCACACATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR TCA 72 bp | TTGGTTTGGAATGCTCTGCCTTTCTTTAAGATCACTTaGTACCAAGGAGTGTGGGGCAGGACTACAAAATGC | + |
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Preference number: 3 (lower is better) Translates to: LVWNALPFFKIT*YQGVWGRTTKC Trigger: GCATTTTGTAGTCCTGCCCCACACTCCTTGGTATCAAGTGATCTTAAAGAAAGGCAGAGCATTCCAAACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR TCA 72 bp | AGTGAAACTCATCTGACATCAGAGAAACCCACTCAATaGTTTTACTGGCTCCTTCAAAGAGGAAAAGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: SETHLTSEKPTQ*FYWLLQRGKEA Trigger: GGCCTCTTTTCCTCTTTGAAGGAGCCAGTAAAATCATTGAGTGGGTTTCTCTGATGTCAGATGAGTTTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR CCA 72 bp | ATATTTGAGATTGCAACATGCATGTCTCTGATGGCTTaGGAGAATTCAGTAGGTGCTCTTCAGCCTGGAATT | + |
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Preference number: 3 (lower is better) Translates to: IFEIATCMSLMA*ENSVGALQPGI Trigger: AATTCCAGGCTGAAGAGCACCTACTGAATTCTCCCAAGCCATCAGAGACATGCATGTTGCAATCTCAAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| 3UTR TCA 72 bp | CACACACCAGAGCATATTCACCACAATTCAAATGCCTaGGAGAGGATTTGTTCTCCTCAAAGATCTAACAGA | + |
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Preference number: 3 (lower is better) Translates to: HTPEHIHHNSNA*ERICSPQRSNR Trigger: TCTGTTAGATCTTTGAGGAGAACAAATCCTCTCTCAGGCATTTGAATTGTGGTGAATATGCTCTGGTGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR TCA 72 bp | ATAAGGGACTACACCTTGGAGAAAGTGAAACTCATCTaGCATCAGAGAAACCCACTCAATGATTTTACTGGC | + |
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Preference number: 3 (lower is better) Translates to: IRDYTLEKVKLI*HQRNPLNDFTG Trigger: GCCAGTAAAATCATTGAGTGGGTTTCTCTGATGTCAGATGAGTTTCACTTTCTCCAAGGTGTAGTCCCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR CCA 72 bp | GAGCACCATACGACAAAACCTACCTACAAGTTCCTTTaGTTTGGAATGCTCTGCCTTTCTTTAAGATCACTT | + |
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Preference number: 3 (lower is better) Translates to: EHHTTKPTYKFL*FGMLCLSLRSL Trigger: AAGTGATCTTAAAGAAAGGCAGAGCATTCCAAACCAAAGGAACTTGTAGGTAGGTTTTGTCGTATGGTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| 3UTR GCA 72 bp | AAACCTACCTACAAGTTCCTTTGGTTTGGAATGCTCTaGCTTTCTTTAAGATCACTTGATACCAAGGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: KPTYKFLWFGML*LSLRSLDTKEC Trigger: ACACTCCTTGGTATCAAGTGATCTTAAAGAAAGGCAGAGCATTCCAAACCAAAGGAACTTGTAGGTAGGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| CDS-3UTR CCA 90 bp | TTCAAGAGGTTGAGGCACAGGGATTGCCTTGAGTCTGAGGTCAGCCTCTGCTACGTGAGGTGGTGGGTATaGCCCCAGGCTGCTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: FKRLRHRDCLESEVSLCYVRWWV*PQAAPL Trigger: CAGTGGAGCAGCCTGGGGCCATACCCACCACCTCAC...GTAGCAGAGGCTGACCTCAGACTCAAGGCAATCCCTGTGCCTCAACCTCTTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR CCA 90 bp | TTGAGTCTGAGGTCAGCCTCTGCTACGTATATAGTACAGGCCAACCACAGCTACGTGAGGTGGTGGGTATaGCCCCAGGCTGCTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: LSLRSASATYIVQANHSYVRWWV*PQAAPL Trigger: CAGTGGAGCAGCCTGGGGCCATACCCACCACCTCAC...GTAGCTGTGGTTGGCCTGTACTATATACGTAGCAGAGGCTGACCTCAGACTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR GCA 90 bp | CAAGACAGACGTGATGTCATACCAGCATTCAAGAGGTTGAGGCACAGGGATTGCGGTATGGCCCCAGGCTaGTCCACTGCCTTCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QDRRDVIPAFKRLRHRDCGMAPG*STAFFL Trigger: GAGGAAGAAGGCAGTGGAGCAGCCTGGGGCCATACC...GCAATCCCTGTGCCTCAACCTCTTGAATGCTGGTATGACATCACGTCTGTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR CCA 90 bp | CAAGACAGACGTGATGTCATACCAGCATTCAAGAGGTTGAGGCACAGGGATTGCATCCCAGTGAGGTGGTaGGTATGGCCCCAGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QDRRDVIPAFKRLRHRDCIPVRW*VWPQAA Trigger: AGCAGCCTGGGGCCATACCCACCACCTCACTGGGAT...GCAATCCCTGTGCCTCAACCTCTTGAATGCTGGTATGACATCACGTCTGTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR CCA 90 bp | CACAGGGATTGCCTTGAGTCTGAGGTCAGCCTCTGCTACGTATATAGTACAGGCAGAATCCCAGTGAGGTaGTGGGTATGGCCCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: HRDCLESEVSLCYVYSTGRIPVR*WVWPQA Trigger: AGCCTGGGGCCATACCCACCACCTCACTGGGATTCT...GCCTGTACTATATACGTAGCAGAGGCTGACCTCAGACTCAAGGCAATCCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR GCA 90 bp | CAAGACAGACGTGATGTCATACCAGCATTCAAGAGGTTGAGGCACAGGGATTGCCCCAGGCTGCTCCACTaGCTTCTTCCTCACCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: QDRRDVIPAFKRLRHRDCPRLLH*LLPHLP Trigger: AGGAAGGTGAGGAAGAAGGCAGTGGAGCAGCCTGGG...GCAATCCCTGTGCCTCAACCTCTTGAATGCTGGTATGACATCACGTCTGTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR GCA 90 bp | TGCATGTCTCTGATGGCTTGGGAGAATTCAGTAGGTGCTCTTCAGCCTGGAATTGGTATGGCCCCAGGCTaGTCCACTGCCTTCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: CMSLMAWENSVGALQPGIGMAPG*STAFFL Trigger: GAGGAAGAAGGCAGTGGAGCAGCCTGGGGCCATACC...AATTCCAGGCTGAAGAGCACCTACTGAATTCTCCCAAGCCATCAGAGACATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR CCA 90 bp | TTGAGTCTGAGGTCAGCCTCTGCTACGTATATAGTACAGGCCAACCACAGCTACAGAATCCCAGTGAGGTaGTGGGTATGGCCCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LSLRSASATYIVQANHSYRIPVR*WVWPQA Trigger: AGCCTGGGGCCATACCCACCACCTCACTGGGATTCT...GTAGCTGTGGTTGGCCTGTACTATATACGTAGCAGAGGCTGACCTCAGACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR TCA 90 bp | TTGAGTCTGAGGTCAGCCTCTGCTACGTATATAGTACAGGCCAACCACAGCTACAAAGAAGAATCCCAGTaGGGTGGTGGGTATGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LSLRSASATYIVQANHSYKEESQ*GGGYGP Trigger: GGGGCCATACCCACCACCTCACTGGGATTCTTCTTT...GTAGCTGTGGTTGGCCTGTACTATATACGTAGCAGAGGCTGACCTCAGACTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR GCA 90 bp | ATGCATGTCTCTGATGGCTTGGGAGAATTCAGTAGGTGCTCTTCAGCCTGGAATGTGGGCAGAGCAGACTaGTCTTCTGAGGCCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: MHVSDGLGEFSRCSSAWNVGRAD*SSEASF Trigger: AAAGGAGGCCTCAGAAGAGCAGTCTGCTCTGCCCAC...ATTCCAGGCTGAAGAGCACCTACTGAATTCTCCCAAGCCATCAGAGACATGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| 3UTR CAA 72 bp | CAAGACAGACGTGATGTCATACCAGCATTCAAGAGGTaGAGGCACAGGGATTGCCTTGAGTCTGAGGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: QDRRDVIPAFKR*RHRDCLESEVS Trigger: GCTGACCTCAGACTCAAGGCAATCCCTGTGCCTCAACCTCTTGAATGCTGGTATGACATCACGTCTGTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR TCA 90 bp | TTCAAGCCAGACCAGGCAAGACTCAGACTGATTCACATGAGAAGGGATGGCGCCTTACACCAACTCCAGTaGACCTGGCCTCTAGTAATT | + |
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Preference number: 4 (lower is better) Translates to: FKPDQARLRLIHMRRDGALHQLQ*TWPLVI Trigger: AATTACTAGAGGCCAGGTTCACTGGAGTTGGTGTAA...GGCGCCATCCCTTCTCATGTGAATCAGTCTGAGTCTTGCCTGGTCTGGCTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| CDS-3UTR CCA 90 bp | TTCAAGCCAGACCAGGCAAGACTCAGACTGATTCACATGAGAAGGGATGGCGCCTGTTACTACTGGCTTTaGCGGGAACTGTACTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: FKPDQARLRLIHMRRDGACYYWL*RELYFS Trigger: ACTGAAGTACAGTTCCCGCCAAAGCCAGTAGTAACA...GGCGCCATCCCTTCTCATGTGAATCAGTCTGAGTCTTGCCTGGTCTGGCTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| CDS-3UTR TCA 90 bp | CACAGGGATTGCCTTGAGTCTGAGGTCAGCCTCTGCTACGTATATAGTACAGGCTTACACCAACTCCAGTaGACCTGGCCTCTAGTAATT | + |
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Preference number: 4 (lower is better) Translates to: HRDCLESEVSLCYVYSTGLHQLQ*TWPLVI Trigger: AATTACTAGAGGCCAGGTTCACTGGAGTTGGTGTAA...GCCTGTACTATATACGTAGCAGAGGCTGACCTCAGACTCAAGGCAATCCCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR TCA 90 bp | CAGATTGTTCATGCCACTAAAGGATTTCAAGACAGACGTGATGTCATACCAGCAAAAGAAGAATCCCAGTaGGGTGGTGGGTATGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QIVHATKGFQDRRDVIPAKEESQ*GGGYGP Trigger: GGGGCCATACCCACCACCTCACTGGGATTCTTCTTT...TGCTGGTATGACATCACGTCTGTCTTGAAATCCTTTAGTGGCATGAACAATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR CCA 90 bp | TTCAAGAGGTTGAGGCACAGGGATTGCCTTGAGTCTGAGGTCAGCCTCTGCTACATTTCCTCTTGTTCATaGTACTCGGCTAACGTTAAC | + |
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Preference number: 4 (lower is better) Translates to: FKRLRHRDCLESEVSLCYISSCS*YSANVN Trigger: GTTAACGTTAGCCGAGTACCATGAACAAGAGGAAAT...GTAGCAGAGGCTGACCTCAGACTCAAGGCAATCCCTGTGCCTCAACCTCTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR TCA 90 bp | TGCATGTCTCTGATGGCTTGGGAGAATTCAGTAGGTGCTCTTCAGCCTGGAATTGAAGGACTGTTTTGTTaGGCAGAGACGAAAGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: CMSLMAWENSVGALQPGIEGLFC*AETKVK Trigger: CTTCACTTTCGTCTCTGCTCAACAAAACAGTCCTTC...AATTCCAGGCTGAAGAGCACCTACTGAATTCTCCCAAGCCATCAGAGACATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092537.10 |
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| CDS-3UTR GCA 90 bp | CAGAGCATATTCACCACAATTCAAATGCCTGAGAGAGGATTTGTTCTCCTCAAAGTGGGCAGAGCAGACTaGTCTTCTGAGGCCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: QSIFTTIQMPERGFVLLKVGRAD*SSEASF Trigger: AAAGGAGGCCTCAGAAGAGCAGTCTGCTCTGCCCAC...TTTGAGGAGAACAAATCCTCTCTCAGGCATTTGAATTGTGGTGAATATGCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| CDS-3UTR CCA 90 bp | TTCAAGCCAGACCAGGCAAGACTCAGACTGATTCACATGAGAAGGGATGGCGCCTCATTTAGTGTTGGATaGTCTTTAAACTGCGAATTG | + |
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Preference number: 4 (lower is better) Translates to: FKPDQARLRLIHMRRDGASFSVG*SLNCEL Trigger: CAATTCGCAGTTTAAAGACCATCCAACACTAAATGA...GGCGCCATCCCTTCTCATGTGAATCAGTCTGAGTCTTGCCTGGTCTGGCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| CDS-3UTR CCA 90 bp | ATTAAAACATGTCTTATATTTGAGATTGCAACATGCATGTCTCTGATGGCTTGGATCCCAGTGAGGTGGTaGGTATGGCCCCAGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: IKTCLIFEIATCMSLMAWIPVRW*VWPQAA Trigger: AGCAGCCTGGGGCCATACCCACCACCTCACTGGGAT...CCAAGCCATCAGAGACATGCATGTTGCAATCTCAAATATAAGACATGTTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR GCA 90 bp | CATCAGAGAAACCCACTCAATGATTTTACTGGCTCCTTCAAAGAGGAAAAGAGGGCTGCTGCACATCAATaGGATCTTCCTTTCGATAGG | + |
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Preference number: 4 (lower is better) Translates to: HQRNPLNDFTGSFKEEKRAAAHQ*DLPFDR Trigger: CCTATCGAAAGGAAGATCGCATTGATGTGCAGCAGC...CCTCTTTTCCTCTTTGAAGGAGCCAGTAAAATCATTGAGTGGGTTTCTCTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| CDS-3UTR GCA 90 bp | ATTAAAACATGTCTTATATTTGAGATTGCAACATGCATGTCTCTGATGGCTTGGCCCAGGCTGCTCCACTaGCTTCTTCCTCACCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: IKTCLIFEIATCMSLMAWPRLLH*LLPHLP Trigger: AGGAAGGTGAGGAAGAAGGCAGTGGAGCAGCCTGGG...CCAAGCCATCAGAGACATGCATGTTGCAATCTCAAATATAAGACATGTTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR CCA 90 bp | ATGCATGTCTCTGATGGCTTGGGAGAATTCAGTAGGTGCTCTTCAGCCTGGAATATTTCCTCTTGTTCATaGTACTCGGCTAACGTTAAC | + |
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Preference number: 4 (lower is better) Translates to: MHVSDGLGEFSRCSSAWNISSCS*YSANVN Trigger: GTTAACGTTAGCCGAGTACCATGAACAAGAGGAAAT...ATTCCAGGCTGAAGAGCACCTACTGAATTCTCCCAAGCCATCAGAGACATGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR GCA 90 bp | ATTAAAACATGTCTTATATTTGAGATTGCAACATGCATGTCTCTGATGGCTTGGGTGGGCAGAGCAGACTaGTCTTCTGAGGCCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: IKTCLIFEIATCMSLMAWVGRAD*SSEASF Trigger: AAAGGAGGCCTCAGAAGAGCAGTCTGCTCTGCCCAC...CCAAGCCATCAGAGACATGCATGTTGCAATCTCAAATATAAGACATGTTTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR CCA 90 bp | ATGCATGTCTCTGATGGCTTGGGAGAATTCAGTAGGTGCTCTTCAGCCTGGAATTCATTTAGTGTTGGATaGTCTTTAAACTGCGAATTG | + |
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Preference number: 4 (lower is better) Translates to: MHVSDGLGEFSRCSSAWNSFSVG*SLNCEL Trigger: CAATTCGCAGTTTAAAGACCATCCAACACTAAATGA...ATTCCAGGCTGAAGAGCACCTACTGAATTCTCCCAAGCCATCAGAGACATGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| 3UTR CAA 72 bp | AGAGCACCATACGACAAAACCTACCTACAAGTTCCTTaGGTTTGGAATGCTCTGCCTTTCTTTAAGATCACT | + |
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Preference number: 4 (lower is better) Translates to: RAPYDKTYLQVP*VWNALPFFKIT Trigger: AGTGATCTTAAAGAAAGGCAGAGCATTCCAAACCAAAGGAACTTGTAGGTAGGTTTTGTCGTATGGTGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| CDS-3UTR TCA 90 bp | AAAACATGTCTTATATTTGAGATTGCAACATGCATGTCTCTGATGGCTTGGGAGTTACACCAACTCCAGTaGACCTGGCCTCTAGTAATT | + |
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Preference number: 4 (lower is better) Translates to: KTCLIFEIATCMSLMAWELHQLQ*TWPLVI Trigger: AATTACTAGAGGCCAGGTTCACTGGAGTTGGTGTAA...CTCCCAAGCCATCAGAGACATGCATGTTGCAATCTCAAATATAAGACATGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR TCA 90 bp | ATATTCACCACAATTCAAATGCCTGAGAGAGGATTTGTTCTCCTCAAAGATCTAGAAGGACTGTTTTGTTaGGCAGAGACGAAAGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: IFTTIQMPERGFVLLKDLEGLFC*AETKVK Trigger: CTTCACTTTCGTCTCTGCTCAACAAAACAGTCCTTC...TAGATCTTTGAGGAGAACAAATCCTCTCTCAGGCATTTGAATTGTGGTGAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| CDS-3UTR GCA 90 bp | CAGAGCATATTCACCACAATTCAAATGCCTGAGAGAGGATTTGTTCTCCTCAAAACATCTCCTGATAAATaGCTTTGCTTCAGGTGTTAC | + |
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Preference number: 4 (lower is better) Translates to: QSIFTTIQMPERGFVLLKTSPDK*LCFRCY Trigger: GTAACACCTGAAGCAAAGGCATTTATCAGGAGATGT...TTTGAGGAGAACAAATCCTCTCTCAGGCATTTGAATTGTGGTGAATATGCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| CDS-3UTR CCA 90 bp | CAGAGCATATTCACCACAATTCAAATGCCTGAGAGAGGATTTGTTCTCCTCAAAATTTCCTCTTGTTCATaGTACTCGGCTAACGTTAAC | + |
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Preference number: 4 (lower is better) Translates to: QSIFTTIQMPERGFVLLKISSCS*YSANVN Trigger: GTTAACGTTAGCCGAGTACCATGAACAAGAGGAAAT...TTTGAGGAGAACAAATCCTCTCTCAGGCATTTGAATTGTGGTGAATATGCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| CDS-3UTR CAA 90 bp | CACAGGGATTGCCTTGAGTCTGAGGTCAGCCTCTGCTACGTATATAGTACAGGCAGAAGAAGGACTGTTTaGTTGAGCAGAGACGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: HRDCLESEVSLCYVYSTGRRRTV*LSRDES Trigger: ACTTTCGTCTCTGCTCAACAAAACAGTCCTTCTTCT...GCCTGTACTATATACGTAGCAGAGGCTGACCTCAGACTCAAGGCAATCCCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092537.10 |
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| CDS-3UTR CAA 90 bp | ATTCAAGCCAGACCAGGCAAGACTCAGACTGATTCACATGAGAAGGGATGGCGCCAAGAATGTTCTGTATaGCCAGAACCCGTAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: IQARPGKTQTDSHEKGWRQECSV*PEPVEE Trigger: TTCTTCTACGGGTTCTGGCAATACAGAACATTCTTG...GCGCCATCCCTTCTCATGTGAATCAGTCTGAGTCTTGCCTGGTCTGGCTTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| CDS-3UTR CAA 90 bp | TTGAGTCTGAGGTCAGCCTCTGCTACGTATATAGTACAGGCCAACCACAGCTACATCCTTTCCTGTTGCTaGATGAGGTTTTGGAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: LSLRSASATYIVQANHSYILSCC*MRFWKA Trigger: TGCTTTCCAAAACCTCATCAAGCAACAGGAAAGGAT...GTAGCTGTGGTTGGCCTGTACTATATACGTAGCAGAGGCTGACCTCAGACTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR CAA 90 bp | ATGCATGTCTCTGATGGCTTGGGAGAATTCAGTAGGTGCTCTTCAGCCTGGAATCAAGAATGTTCTGTATaGCCAGAACCCGTAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: MHVSDGLGEFSRCSSAWNQECSV*PEPVEE Trigger: TTCTTCTACGGGTTCTGGCAATACAGAACATTCTTG...ATTCCAGGCTGAAGAGCACCTACTGAATTCTCCCAAGCCATCAGAGACATGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092537.10 |
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| CDS-3UTR CAA 90 bp | CACAGGGATTGCCTTGAGTCTGAGGTCAGCCTCTGCTACGTATATAGTACAGGCATTTATCCTTTCCTGTaGCTTGATGAGGTTTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: HRDCLESEVSLCYVYSTGIYPFL*LDEVLE Trigger: TTCCAAAACCTCATCAAGCAACAGGAAAGGATAAAT...GCCTGTACTATATACGTAGCAGAGGCTGACCTCAGACTCAAGGCAATCCCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR CAA 90 bp | TTGAGTCTGAGGTCAGCCTCTGCTACGTATATAGTACAGGCCAACCACAGCTACATTTATCCTTTCCTGTaGCTTGATGAGGTTTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: LSLRSASATYIVQANHSYIYPFL*LDEVLE Trigger: TTCCAAAACCTCATCAAGCAACAGGAAAGGATAAAT...GTAGCTGTGGTTGGCCTGTACTATATACGTAGCAGAGGCTGACCTCAGACTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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| CDS-3UTR CAA 90 bp | ATATTCACCACAATTCAAATGCCTGAGAGAGGATTTGTTCTCCTCAAAGATCTAAGAAGAAGGACTGTTTaGTTGAGCAGAGACGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: IFTTIQMPERGFVLLKDLRRRTV*LSRDES Trigger: ACTTTCGTCTCTGCTCAACAAAACAGTCCTTCTTCT...TAGATCTTTGAGGAGAACAAATCCTCTCTCAGGCATTTGAATTGTGGTGAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| CDS-3UTR CAA 90 bp | CAGAGCATATTCACCACAATTCAAATGCCTGAGAGAGGATTTGTTCTCCTCAAAATTTATCCTTTCCTGTaGCTTGATGAGGTTTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: QSIFTTIQMPERGFVLLKIYPFL*LDEVLE Trigger: TTCCAAAACCTCATCAAGCAACAGGAAAGGATAAAT...TTTGAGGAGAACAAATCCTCTCTCAGGCATTTGAATTGTGGTGAATATGCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106939.9 |
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| CDS TCA 72 bp | AGGATTCCAATGATTAACTGCAAAGAAGAATCCCAGTaGGGTGGTGGGTATGGCCCCAGGCTGCTCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: RIPMINCKEESQ*GGGYGPRLLHC Trigger: GCAGTGGAGCAGCCTGGGGCCATACCCACCACCTCACTGGGATTCTTCTTTGCAGTTAATCATTGGAATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092537.10 ENSMUST00000145048.8 |
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