Pregenerated sensors for TLE7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095941Ensembl transcript IDs: ENSMUST00000178785.2, ENSMUST00000213641.2, ENSMUST00000219454.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGAGGCAGGTaGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGACCTCC | + |
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Preference number: 2 (lower is better) Translates to: ECSQPAIKAQVEGGR*WKMSGTVSSRDLTS Trigger: GGAGGTCAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| 3UTR CCA 72 bp | CCAGCCATCAAGGCTCAAGTAGAGGGAGGCAGGTTGTaGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTG | + |
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Preference number: 3 (lower is better) Translates to: PAIKAQVEGGRL*KMSGTVSSRDL Trigger: CAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCCTTGATGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCCAAGTCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTGTAGAGGGAGGCAGGTaGTGGAAGATGTCCGGCACT | + |
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Preference number: 3 (lower is better) Translates to: PPSHITKAWECSQPAIKAVEGGR*WKMSGT Trigger: AGTGCCGGACATCTTCCACAACCTGCCTCCCTCTAC...AGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGACTTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | GCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGTTGCGAGTCTCTGCTaGGGGGACCCGGGGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: AQVEGGRLWKMSGTVSSRVASLC*GDPGAA Trigger: GGCGGCCCCCGGGTCCCCCCAGCAGAGACTCGCAAC...GCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213641.2 |
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| CDS-3UTR CCA 90 bp | GGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGACCTCATCTGTGCCCTGACTTaGGGGGTGGGTGCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GRQVVEDVRHCELPRSDLICALT*GVGARS Trigger: GGACCTGGCACCCACCCCCCAAGTCAGGGCACAGAT...GAGGTCAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | GAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGGGCTTGGACGGAGGGTaGGTGGGATTTCCGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: ECSQPAIKAQVEGGRLWKGLDGG*VGFPRP Trigger: CGGCCGCGGAAATCCCACCCACCCTCCGTCCAAGCC...CTTCCACAACCTGCCTCCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213641.2 |
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| CDS-3UTR CCA 90 bp | AGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGACAGGCTTCCTGGAGGCTaGGCTTGGACGGAGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RGRQVVEDVRHCELPRSDRLPGG*AWTEGG Trigger: CCCACCCTCCGTCCAAGCCCAGCCTCCAGGAAGCCT...GTCAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213641.2 |
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| CDS-3UTR TCA 90 bp | AGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGACCTCCGTAAGTCCAGCTGGGCCTaGGGTGCCCTGTCTGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: RQVVEDVRHCELPRSDLRKSSWA*GALSEA Trigger: TGCCTCAGACAGGGCACCTCAGGCCCAGCTGGACTT...ACGGAGGTCAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | GGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGAAGTCCAGCTGGGCCTaGGGTGCCCTGTCTGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: GSSRGRQVVEDVRHCELPKSSWA*GALSEA Trigger: TGCCTCAGACAGGGCACCTCAGGCCCAGCTGGACTT...CGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | AGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGACGCGGCCGATAGGGGGTaGGAGCCACACCTCAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: RGRQVVEDVRHCELPRSDAADRG*EPHLKN Trigger: GTTCTTGAGGTGTGGCTCCCACCCCCTATCGGCCGC...GTCAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213641.2 |
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| CDS-3UTR CCA 90 bp | AAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGAGGCAGGTTGAGGGAGGCTTCCTaGAGGCTGGGCTTGGACGGA | + |
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Preference number: 4 (lower is better) Translates to: KAWECSQPAIKAQVEGGRLREAS*RLGLDG Trigger: TCCGTCCAAGCCCAGCCTCCAGGAAGCCTCCCTCAA...CCTGCCTCCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213641.2 |
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| CDS-3UTR TCA 90 bp | AAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGAGGCAGGGGAACAGCTTGCACGTaGGGACACGATTCCGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: KAWECSQPAIKAQVEGGRGTACT*GHDSEG Trigger: ACCCTCGGAATCGTGTCCTCACGTGCAAGCTGTTCC...CCTGCCTCCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | AGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTCACTGGGGTCGTGGGTaGTGCTCAGGATCTCATGGC | + |
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Preference number: 4 (lower is better) Translates to: SRGRQVVEDVRHCELPRSHWGRG*CSGSHG Trigger: GCCATGAGATCCTGAGCATCACCCACGACCCCAGTG...AGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | GGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCCGCCAGGAACCACATaGGGACTTCTGCTTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: GSSRGRQVVEDVRHCELPPPGTT*GLLLDH Trigger: GTGGTCAAGCAGAAGTCCCCATGTGGTTCCTGGCGG...CGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| 3UTR CAA 72 bp | CAGCCAGCCATCAAGGCTCAAGTAGAGGGAGGCAGGTaGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGAT | + |
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Preference number: 4 (lower is better) Translates to: QPAIKAQVEGGR*WKMSGTVSSRD Trigger: ATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCCTTGATGGCTGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR GCA 90 bp | AAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGAGGCAGGGCCCTGTCTGAGGCATaGAGCGCATTTTCATCCCAC | + |
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Preference number: 4 (lower is better) Translates to: KAWECSQPAIKAQVEGGRALSEA*SAFSSH Trigger: GTGGGATGAAAATGCGCTGCATGCCTCAGACAGGGC...CCTGCCTCCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR GCA 90 bp | GAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGACCGGATCCCACTGCTGCTaGATCATACTGTGCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: EGGRLWKMSGTVSSRDLTGSHCC*IILCIS Trigger: GGAGATGCACAGTATGATGCAGCAGCAGTGGGATCC...GGTCAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | AAGCCCCCAAGTCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGCACTGGGGTCGTGGGTaGTGCTCAGGATCTCATGGC | + |
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Preference number: 4 (lower is better) Translates to: KPPSHITKAWECSQPAIKHWGRG*CSGSHG Trigger: GCCATGAGATCCTGAGCATCACCCACGACCCCAGTG...CTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGACTTGGGGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR GCA 90 bp | GAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGACCCCTGTGATGAGACTCTaGTCATCAGGGAACAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: EGGRLWKMSGTVSSRDLTPVMRL*SSGNSL Trigger: CAAGCTGTTCCCTGATGAGCAGAGTCTCATCACAGG...GGTCAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | GGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCCCAGGAATATAGGGTaGTGTCTTCACCACCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: GSSRGRQVVEDVRHCELPPRNIG*CLHHLS Trigger: GGACAGGTGGTGAAGACACCACCCTATATTCCTGGG...CGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | AGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTTCCTCACTGGGGTCGTaGGTGATGCTCAGGATCTCA | + |
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Preference number: 4 (lower is better) Translates to: SRGRQVVEDVRHCELPRSSSLGS*VMLRIS Trigger: TGAGATCCTGAGCATCACCCACGACCCCAGTGAGGA...AGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | TATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGGAAGCCAAGCAGAGGTaGGCATCAGAGGAAAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: YNQSLGVQPASHQGSSRGEAKQR*ASEERA Trigger: GGCCCTTTCCTCTGATGCTCACCTCTGCTTGGCTTC...CCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | AGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGACTGGGAGGAATGGCTTTaGGGAATGACCAGACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RGRQVVEDVRHCELPRSDWEEWL*GMTRLL Trigger: GAGAAGTCTGGTCATTCCTCAAAGCCATTCCTCCCA...GTCAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR GCA 90 bp | CAAGGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCGCCCTGTCTGAGGCATaGAGCGCATTTTCATCCCAC | + |
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Preference number: 4 (lower is better) Translates to: QGSSRGRQVVEDVRHCELALSEA*SAFSSH Trigger: GTGGGATGAAAATGCGCTGCATGCCTCAGACAGGGC...GAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | AAGCCCCCAAGTCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGCCGCCAGGAACCACATaGGGACTTCTGCTTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: KPPSHITKAWECSQPAIKPPGTT*GLLLDH Trigger: GTGGTCAAGCAGAAGTCCCCATGTGGTTCCTGGCGG...CTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGACTTGGGGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | GCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCAGAGCTGATACACTGTaGCACTATCCTTGGAACCCG | + |
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Preference number: 4 (lower is better) Translates to: AQVEGGRLWKMSGTVSSRRADTL*HYPWNP Trigger: CGGGTTCCAAGGATAGTGCCACAGTGTATCAGCTCT...GCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | AGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGACCTCCGTGATGGAGAAGAGAACTaGCCAGTCTTGTCTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: RQVVEDVRHCELPRSDLRDGEEN*PVLSPG Trigger: ACCAGGAGACAAGACTGGCCAGTTCTCTTCTCCATC...ACGGAGGTCAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | AGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGGTGAGCATGCAGGATaGCAACATCGCTCATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SRGRQVVEDVRHCELPRSGEHAG*QHRSSS Trigger: TGAAGATGAGCGATGTTGTCATCCTGCATGCTCACC...AGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | AGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGACCTCCGTAATGGCTTTGAGGAATaGCCAGACTTCTCTGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: RQVVEDVRHCELPRSDLRNGFEE*PDFSVG Trigger: CCCAACAGAGAAGTCTGGTCATTCCTCAAAGCCATT...ACGGAGGTCAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | AGAAAAGCCCCCAAGTCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATAGGGTCATGCTGTATTaGGGGACATGGGGGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RKAPKSYNQSLGVQPASHRVMLY*GTWGQL Trigger: CAGCTGCCCCCATGTCCCTCAATACAGCATGACCCT...ATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGACTTGGGGGCTTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000219454.2 |
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| CDS-3UTR GCA 90 bp | TATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGCCACATGGGGACTTCTaGTTGACCACTGCCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: YNQSLGVQPASHQGSSRGPHGDF*LTTASS Trigger: GGATGAGGCAGTGGTCAAGCAGAAGTCCCCATGTGG...CCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR GCA 90 bp | GAAAAGCCCCCAAGTCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCCCACATGGGGACTTCTaGTTGACCACTGCCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: EKPPSHITKAWECSQPAIPHGDF*LTTASS Trigger: GGATGAGGCAGTGGTCAAGCAGAAGTCCCCATGTGG...GATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGACTTGGGGGCTTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | GAAAAGCCCCCAAGTCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCTCCTCACTGGGGTCGTaGGTGATGCTCAGGATCTCA | + |
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Preference number: 4 (lower is better) Translates to: EKPPSHITKAWECSQPAISSLGS*VMLRIS Trigger: TGAGATCCTGAGCATCACCCACGACCCCAGTGAGGA...GATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGACTTGGGGGCTTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | GCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGTCTTGTCTCCTGGTTaGAATCTTGAGCCAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: AQVEGGRLWKMSGTVSSRVLSPG*NLEPVP Trigger: AGGAACTGGCTCAAGATTCCAACCAGGAGACAAGAC...GCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | AGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGATGGAGAAGAGAACTaGCCAGTCTTGTCTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SRGRQVVEDVRHCELPRSDGEEN*PVLSPG Trigger: ACCAGGAGACAAGACTGGCCAGTTCTCTTCTCCATC...AGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | AGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGACCTCCGTACCAGACTTCTCTGTTaGGCAAGGATGGAGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: RQVVEDVRHCELPRSDLRTRLLC*ARMEKR Trigger: TCTCTTCTCCATCCTTGCCCAACAGAGAAGTCTGGT...ACGGAGGTCAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | AAGTCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTGGAACAGCTTGCACGTaGGGACACGATTCCGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: KSYNQSLGVQPASHQGSSGTACT*GHDSEG Trigger: ACCCTCGGAATCGTGTCCTCACGTGCAAGCTGTTCC...ACTTGAGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR GCA 90 bp | ATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGAGGATCCCACTGCTGCTaGATCATACTGTGCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: ITKAWECSQPAIKAQVEGGSHCC*IILCIS Trigger: GGAGATGCACAGTATGATGCAGCAGCAGTGGGATCC...TCCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | GAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGGTCTTGTCTCCTGGTTaGAATCTTGAGCCAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ECSQPAIKAQVEGGRLWKVLSPG*NLEPVP Trigger: AGGAACTGGCTCAAGATTCCAACCAGGAGACAAGAC...CTTCCACAACCTGCCTCCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | CAAGGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCTTCTGGTTCTGCTTCTaGAAACCACATGGACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: QGSSRGRQVVEDVRHCELFWFCF*KPHGLE Trigger: CTCCAGTCCATGTGGTTTTCAGAAGCAGAACCAGAA...GAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | CCCCCAAGTCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTTTCTGGTTCTGCTTCTaGAAACCACATGGACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PPSHITKAWECSQPAIKAFWFCF*KPHGLE Trigger: CTCCAGTCCATGTGGTTTTCAGAAGCAGAACCAGAA...AGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGACTTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | GAAAAGCCCCCAAGTCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCTGGGAGGAATGGCTTTaGGGAATGACCAGACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: EKPPSHITKAWECSQPAIWEEWL*GMTRLL Trigger: GAGAAGTCTGGTCATTCCTCAAAGCCATTCCTCCCA...GATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGACTTGGGGGCTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | GCCATCAAGGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGATGCTCAGGATCTCATaGCATAAGCTGTGTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AIKAQVEGGRLWKMSGTVMLRIS*HKLCCC Trigger: GCAGCAACACAGCTTATGCCATGAGATCCTGAGCAT...CACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCCTTGATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | GCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCAACACCCGAGCTTTCTaGCATCTTCTTTATCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: AQVEGGRLWKMSGTVSSRNTRAF*HLLYLL Trigger: AAGGAGATAAAGAAGATGCCAGAAAGCTCGGGTGTT...GCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | AAAGCCCCCAAGTCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGTGAGCATGCAGGATaGCAACATCGCTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KAPKSYNQSLGVQPASHQGEHAG*QHRSSS Trigger: TGAAGATGAGCGATGTTGTCATCCTGCATGCTCACC...TTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGACTTGGGGGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | ATCAAGGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCAATGGCTTTGAGGAATaGCCAGACTTCTCTGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IKAQVEGGRLWKMSGTVSNGFEE*PDFSVG Trigger: CCCAACAGAGAAGTCTGGTCATTCCTCAAAGCCATT...GCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCCTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR GCA 90 bp | GGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGATCAAGATTTGGTTCTaGACATCCCAAATCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GSSRGRQVVEDVRHCELPIKIWF*TSQIST Trigger: TGTGGAGATTTGGGATGTGCAGAACCAAATCTTGAT...CGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | TCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGACCCAGGAATATAGGGTaGTGTCTTCACCACCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SYNQSLGVQPASHQGSSRPRNIG*CLHHLS Trigger: GGACAGGTGGTGAAGACACCACCCTATATTCCTGGG...TCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | ATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGAATGCTCAGGATCTCATaGCATAAGCTGTGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ITKAWECSQPAIKAQVEGMLRIS*HKLCCC Trigger: GCAGCAACACAGCTTATGCCATGAGATCCTGAGCAT...TCCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | ATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGAACCAGACTTCTCTGTTaGGCAAGGATGGAGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ITKAWECSQPAIKAQVEGTRLLC*ARMEKR Trigger: TCTCTTCTCCATCCTTGCCCAACAGAGAAGTCTGGT...TCCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | GAAAAGCCCCCAAGTCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCTCTCCACAAATCCTTTaGAAGAAGCCAAGCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EKPPSHITKAWECSQPAISPQIL*KKPSRG Trigger: ACCTCTGCTTGGCTTCTTTCAAAGGATTTGTGGAGA...GATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGACTTGGGGGCTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | ATCAAGGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCTCCACAAATCCTTTaGAAGAAGCCAAGCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IKAQVEGGRLWKMSGTVSSPQIL*KKPSRG Trigger: ACCTCTGCTTGGCTTCTTTCAAAGGATTTGTGGAGA...GCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCCTTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | TATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGGCGAACTTGAGGTTGTaGTGTTGTGTGTATCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YNQSLGVQPASHQGSSRGANLRL*CCVYLW Trigger: CCAAAGATACACACAACATCACAACCTCAAGTTCGC...CCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | AGAAAAGCCCCCAAGTCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATATACTGTGCATCTCCTaGCAAACAGGGTCATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKAPKSYNQSLGVQPASHILCIS*QTGSCC Trigger: ACAGCATGACCCTGTTTGTCAGGAGATGCACAGTAT...ATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGACTTGGGGGCTTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219454.2 |
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| CDS-3UTR CCA 90 bp | TCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAAGAGCTGATACACTGTaGCACTATCCTTGGAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SYNQSLGVQPASHQGSSRRADTL*HYPWNP Trigger: CGGGTTCCAAGGATAGTGCCACAGTGTATCAGCTCT...TCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR TCA 90 bp | TCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGCGAACTTGAGGTTGTaGTGTTGTGTGTATCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SYNQSLGVQPASHQGSSRANLRL*CCVYLW Trigger: CCAAAGATACACACAACATCACAACCTCAAGTTCGC...TCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR GCA 90 bp | ATCAAGGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCATCAAGATTTGGTTCTaGACATCCCAAATCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: IKAQVEGGRLWKMSGTVSIKIWF*TSQIST Trigger: TGTGGAGATTTGGGATGTGCAGAACCAAATCTTGAT...GCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCCTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CAA 90 bp | GGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGTGGCGCAGTGTGCAGTaGAGGGAGGCTTCCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSRGRQVVEDVRHCELPWRSVQ*REASWR Trigger: CCTCCAGGAAGCCTCCCTCAACTGCACACTGCGCCA...CGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213641.2 |
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| CDS-3UTR CAA 90 bp | GGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGACCTCCATGGGGACTTCTGCTaGACCACTGCCTCATCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GRQVVEDVRHCELPRSDLHGDFC*TTASSG Trigger: TCCGGATGAGGCAGTGGTCAAGCAGAAGTCCCCATG...GAGGTCAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS TCA 90 bp | GAGGTGCCCTGTCTGAGGCATGCAGCGCATTTTCATCCCACACCCTaGTATAGCCAGTGCCACACGTGTACACGTGGCAGGGAGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: EVPCLRHAAHFHPTP*YSQCHTCTRGREHC Trigger: GCAGTGCTCCCTGCCACGTGTACACGTGTGGCACTGGCTATATCAGGGTGTGGGATGAAAATGCGCTGCATGCCTCAGACAGGGCACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS GCA 90 bp | TCCCAGAGAGTCAGACCCCTGGCCATTCCCCCTGTGATGAGACTCTaGTCATCAGGGAACAGCTTGCACGTGAGGACACGATTCCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQRVRPLAIPPVMRL*SSGNSLHVRTRFRG Trigger: CCCTCGGAATCGTGTCCTCACGTGCAAGCTGTTCCCTGATGAGCAGAGTCTCATCACAGGGGGAATGGCCAGGGGTCTGACTCTCTGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CAA 90 bp | GAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGCATGGGGACTTCTGCTaGACCACTGCCTCATCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ECSQPAIKAQVEGGRLWKHGDFC*TTASSG Trigger: TCCGGATGAGGCAGTGGTCAAGCAGAAGTCCCCATG...CTTCCACAACCTGCCTCCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CAA 90 bp | GGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGACCTCCTCCTGGTTGGAATCTaGAGCCAGTTCCTCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRQVVEDVRHCELPRSDLLLVGI*SQFLLL Trigger: CAGAAGGAGGAACTGGCTCAAGATTCCAACCAGGAG...GAGGTCAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CAA 90 bp | AAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGAGGCAGGTCATCAGGGAACAGCTaGCACGTGAGGACACGATTC | + |
|
Preference number: 5 (lower is better) Translates to: KAWECSQPAIKAQVEGGRSSGNS*HVRTRF Trigger: GAATCGTGTCCTCACGTGCAAGCTGTTCCCTGATGA...CCTGCCTCCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CAA 90 bp | CCCCCAAGTCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTGACCAGACTTCTCTGTaGGGCAAGGATGGAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPSHITKAWECSQPAIKADQTSL*GKDGEE Trigger: CTCTTCTCCATCCTTGCCCAACAGAGAAGTCTGGTC...AGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGACTTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CAA 90 bp | CAAGGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCGACCAGACTTCTCTGTaGGGCAAGGATGGAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGSSRGRQVVEDVRHCELDQTSL*GKDGEE Trigger: CTCTTCTCCATCCTTGCCCAACAGAGAAGTCTGGTC...GAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS CCA 90 bp | TCGCTCATCTTCAAGCCAGCTAGTACCCATTCCTCACTGGGGTCGTaGGTGATGCTCAGGATCTCATGGCATAAGCTGTGTTGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLIFKPASTHSSLGS*VMLRISWHKLCCCS Trigger: GCTGCAGCAACACAGCTTATGCCATGAGATCCTGAGCATCACCCACGACCCCAGTGAGGAATGGGTACTAGCTGGCTTGAAGATGAGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CAA 90 bp | ATCAAGGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCATCAGGGAACAGCTaGCACGTGAGGACACGATTC | + |
|
Preference number: 5 (lower is better) Translates to: IKAQVEGGRLWKMSGTVSSSGNS*HVRTRF Trigger: GAATCGTGTCCTCACGTGCAAGCTGTTCCCTGATGA...GCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCCTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CAA 90 bp | GAAAAGCCCCCAAGTCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCCTCCTGGTTGGAATCTaGAGCCAGTTCCTCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EKPPSHITKAWECSQPAILLVGI*SQFLLL Trigger: CAGAAGGAGGAACTGGCTCAAGATTCCAACCAGGAG...GATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGACTTGGGGGCTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CAA 90 bp | GAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGGGAGGAATGGCTTaGAGGAATGACCAGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ECSQPAIKAQVEGGRLWKMGGMA*RNDQTS Trigger: AGAAGTCTGGTCATTCCTCAAAGCCATTCCTCCCAT...CTTCCACAACCTGCCTCCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS CCA 90 bp | ATCTTGAGCCAGTTCCTCCTTCTGGTTCTGCTTCTGAAAACCACATaGACTGGAGTCCAGATGTGTCCTGGGCGTGAGGATCCCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILSQFLLLVLLLKTT*TGVQMCPGREDPTA Trigger: AGCAGTGGGATCCTCACGCCCAGGACACATCTGGACTCCAGTCCATGTGGTTTTCAGAAGCAGAACCAGAAGGAGGAACTGGCTCAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CAA 90 bp | GGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGACCTCCTTGAGGTTGTGATGTaGTGTGTATCTTTGGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: GRQVVEDVRHCELPRSDLLEVVM*CVSLDN Trigger: ATTGTCCAAAGATACACACAACATCACAACCTCAAG...GAGGTCAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CAA 90 bp | CAAGGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCATGGGAGGAATGGCTTaGAGGAATGACCAGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QGSSRGRQVVEDVRHCELMGGMA*RNDQTS Trigger: AGAAGTCTGGTCATTCCTCAAAGCCATTCCTCCCAT...GAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS TCA 90 bp | TTTGAAAGAAGCCAAGCAGAGGTGAGCATCAGAGGAAAGGGCCAATaGGTAGCATATGGAGCCCGTGGAAGCCATCTGTGCCCTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FERSQAEVSIRGKGQ*VAYGARGSHLCPDL Trigger: CAAGTCAGGGCACAGATGGCTTCCACGGGCTCCATATGCTACTCATTGGCCCTTTCCTCTGATGCTCACCTCTGCTTGGCTTCTTTCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS TCA 90 bp | TCATCTTCAAGCCAGCTAGTACCCATTCCTCACTGGGGTCGTGGGTaGTGCTCAGGATCTCATGGCATAAGCTGTGTTGCTGCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSSQLVPIPHWGRG*CSGSHGISCVAAAS Trigger: AGAAGCTGCAGCAACACAGCTTATGCCATGAGATCCTGAGCATCACCCACGACCCCAGTGAGGAATGGGTACTAGCTGGCTTGAAGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CAA 90 bp | CAAGGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCATCTCCACAAATCCTTaGAAAGAAGCCAAGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QGSSRGRQVVEDVRHCELISTNP*KEAKQR Trigger: CCTCTGCTTGGCTTCTTTCAAAGGATTTGTGGAGAT...GAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCTACTTGAGCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CAA 90 bp | AGAGGGAGGCAGGTTGTGGAAGATGTCCGGCACTGTGAGCTCCCGCGATCTGACTTTCCTGATCAAGATTaGGTTCTGCACATCCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RGRQVVEDVRHCELPRSDFPDQD*VLHIPN Trigger: ATTTGGGATGTGCAGAACCAAATCTTGATCAGGAAA...GTCAGATCGCGGGAGCTCACAGTGCCGGACATCTTCCACAACCTGCCTCCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CAA 90 bp | GAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGAGGGAGGCAGGTTGTGGAAGTTTCCTGATCAAGATTaGGTTCTGCACATCCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ECSQPAIKAQVEGGRLWKFPDQD*VLHIPN Trigger: ATTTGGGATGTGCAGAACCAAATCTTGATCAGGAAA...CTTCCACAACCTGCCTCCCTCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS-3UTR CAA 90 bp | TCATATAACCAAAGCCTGGGAGTGCAGCCAGCCAGCCATCAAGGCTCAAGTAGACTTGAGGTTGTGATGTaGTGTGTATCTTTGGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: SYNQSLGVQPASHQGSSRLEVVM*CVSLDN Trigger: ATTGTCCAAAGATACACACAACATCACAACCTCAAG...TCTACTTGAGCCTTGATGGCTGGCTGGCTGCACTCCCAGGCTTTGGTTATATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS CAA 72 bp | GGGGCCGCCACAGGAGACACTTGGCGCAGTGTGCAGTaGAGGGAGGCTTCCTGGAGGCTGGGCTTGGACGGA | + |
|
Preference number: 6 (lower is better) Translates to: GAATGDTWRSVQ*REASWRLGLDG Trigger: TCCGTCCAAGCCCAGCCTCCAGGAAGCCTCCCTCAACTGCACACTGCGCCAAGTGTCTCCTGTGGCGGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213641.2 |
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| CDS CCA 72 bp | CATATGGAGCCCGTGGAAGCCATCTGTGCCCTGACTTaGGGGGTGGGTGCCAGGTCCCAGAGAGTCAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: HMEPVEAICALT*GVGARSQRVRP Trigger: GGGTCTGACTCTCTGGGACCTGGCACCCACCCCCCAAGTCAGGGCACAGATGGCTTCCACGGGCTCCATATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS TCA 72 bp | GCACTGCTGATGGCAATGGCGTTGACTCGCTTCCCGTaGCGGAGAGTTCCAACCCGCCAGGAACCACATGGG | + |
|
Preference number: 6 (lower is better) Translates to: ALLMAMALTRFP*RRVPTRQEPHG Trigger: CCCATGTGGTTCCTGGCGGGTTGGAACTCTCCGTCACGGGAAGCGAGTCAACGCCATTGCCATCAGCAGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
||
| CDS GCA 72 bp | AGAGTTCCAACCCGCCAGGAACCACATGGGGACTTCTaGTTGACCACTGCCTCATCCGGAATGGGAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RVPTRQEPHGDF*LTTASSGMGGW Trigger: CCAGCCTCCCATTCCGGATGAGGCAGTGGTCAAGCAGAAGTCCCCATGTGGTTCCTGGCGGGTTGGAACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178785.2 |
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| CDS GCA 72 bp | GTCAGACCCCTGGCCATTCCCCCTGTGATGAGACTCTaGTCATCAGGGAACAGCTTGCACGTGAGGACACGA | + |
|
Preference number: 6 (lower is better) Translates to: VRPLAIPPVMRL*SSGNSLHVRTR Trigger: TCGTGTCCTCACGTGCAAGCTGTTCCCTGATGAGCAGAGTCTCATCACAGGGGGAATGGCCAGGGGTCTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
||
| CDS TCA 72 bp | TTCCAACCCGCCAGGAACCACATGGGGACTTCTGCTTaGCCACTGCCTCATCCGGAATGGGAGGAATGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FQPARNHMGTSA*PLPHPEWEEWL Trigger: AAGCCATTCCTCCCATTCCGGATGAGGCAGTGGTCAAGCAGAAGTCCCCATGTGGTTCCTGGCGGGTTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
||
| CDS GCA 72 bp | AGAGTTCCAACCCGCCAGGAACCACATGGGGACTTCTaGTTGACCACTGCCTCATCCGGAATGGGAGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: RVPTRQEPHGDF*LTTASSGMGGM Trigger: CATTCCTCCCATTCCGGATGAGGCAGTGGTCAAGCAGAAGTCCCCATGTGGTTCCTGGCGGGTTGGAACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
||
| CDS TCA 72 bp | TGTCTGAGGCATGCAGCGCATTTTCATCCCACACCCTaGTATAGCCAGTGCCACACGTGTACACGTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CLRHAAHFHPTP*YSQCHTCTRGR Trigger: CCTGCCACGTGTACACGTGTGGCACTGGCTATATCAGGGTGTGGGATGAAAATGCGCTGCATGCCTCAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS TCA 72 bp | AGCCAAGCAGAGGTGAGCATCAGAGGAAAGGGCCAATaGGTAGCATATGGAGCCCGTGGAAGCCATCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: SQAEVSIRGKGQ*VAYGARGSHLC Trigger: GCACAGATGGCTTCCACGGGCTCCATATGCTACTCATTGGCCCTTTCCTCTGATGCTCACCTCTGCTTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS TCA 72 bp | AACCACATGGACTGGAGTCCAGATGTGTCCTGGGCGTaGGGATCCCACTGCTGCTGCATCATACTGTGCATC | + |
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Preference number: 6 (lower is better) Translates to: NHMDWSPDVSWA*GSHCCCIILCI Trigger: GATGCACAGTATGATGCAGCAGCAGTGGGATCCTCACGCCCAGGACACATCTGGACTCCAGTCCATGTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS TCA 72 bp | ACTGTGCATCTCCTGACAAACAGGGTCATGCTGTATTaGGGGACATGGGGGCAGCTGGAGCATTCCCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: TVHLLTNRVMLY*GTWGQLEHSLC Trigger: GCACAGGGAATGCTCCAGCTGCCCCCATGTCCCTCAATACAGCATGACCCTGTTTGTCAGGAGATGCACAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219454.2 |
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| CDS TCA 72 bp | AGCCAGCTAGTACCCATTCCTCACTGGGGTCGTGGGTaGTGCTCAGGATCTCATGGCATAAGCTGTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: SQLVPIPHWGRG*CSGSHGISCVA Trigger: AGCAACACAGCTTATGCCATGAGATCCTGAGCATCACCCACGACCCCAGTGAGGAATGGGTACTAGCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS CCA 72 bp | TTCAAGCCAGCTAGTACCCATTCCTCACTGGGGTCGTaGGTGATGCTCAGGATCTCATGGCATAAGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: FKPASTHSSLGS*VMLRISWHKLC Trigger: ACACAGCTTATGCCATGAGATCCTGAGCATCACCCACGACCCCAGTGAGGAATGGGTACTAGCTGGCTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS CAA 72 bp | CTGTTGGGCAAGGATGGAGAAGAGAACTGGCCAGTCTaGTCTCCTGGTTGGAATCTTGAGCCAGTTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLGKDGEENWPV*SPGWNLEPVPP Trigger: AGGAGGAACTGGCTCAAGATTCCAACCAGGAGACAAGACTGGCCAGTTCTCTTCTCCATCCTTGCCCAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS CAA 90 bp | TCCGGAATGGGAGGAATGGCTTTGAGGAATGACCAGACTTCTCTGTaGGGCAAGGATGGAGAAGAGAACTGGCCAGTCTTGTCTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SGMGGMALRNDQTSL*GKDGEENWPVLSPG Trigger: ACCAGGAGACAAGACTGGCCAGTTCTCTTCTCCATCCTTGCCCAACAGAGAAGTCTGGTCATTCCTCAAAGCCATTCCTCCCATTCCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS TCA 72 bp | TGCCTCATCCGGAATGGGAGGAATGGCTTTGAGGAATaGCCAGACTTCTCTGTTGGGCAAGGATGGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: CLIRNGRNGFEE*PDFSVGQGWRR Trigger: TCTTCTCCATCCTTGCCCAACAGAGAAGTCTGGTCATTCCTCAAAGCCATTCCTCCCATTCCGGATGAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS CCA 72 bp | GATGGAGAAGAGAACTGGCCAGTCTTGTCTCCTGGTTaGAATCTTGAGCCAGTTCCTCCTTCTGGTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: DGEENWPVLSPG*NLEPVPPSGSA Trigger: AGCAGAACCAGAAGGAGGAACTGGCTCAAGATTCCAACCAGGAGACAAGACTGGCCAGTTCTCTTCTCCATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS CAA 72 bp | GGAGGAATGGCTTTGAGGAATGACCAGACTTCTCTGTaGGGCAAGGATGGAGAAGAGAACTGGCCAGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: GGMALRNDQTSL*GKDGEENWPVL Trigger: CAAGACTGGCCAGTTCTCTTCTCCATCCTTGCCCAACAGAGAAGTCTGGTCATTCCTCAAAGCCATTCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS TCA 72 bp | AGAGCTGATACACTGTGGCACTATCCTTGGAACCCGTaGCCAGATACCGATTATCAGAGGACACTTCACAGC | + |
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Preference number: 6 (lower is better) Translates to: RADTLWHYPWNP*PDTDYQRTLHS Trigger: GCTGTGAAGTGTCCTCTGATAATCGGTATCTGGTCACGGGTTCCAAGGATAGTGCCACAGTGTATCAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS CAA 72 bp | AAGAGAACTGGCCAGTCTTGTCTCCTGGTTGGAATCTaGAGCCAGTTCCTCCTTCTGGTTCTGCTTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: KRTGQSCLLVGI*SQFLLLVLLLK Trigger: TTTCAGAAGCAGAACCAGAAGGAGGAACTGGCTCAAGATTCCAACCAGGAGACAAGACTGGCCAGTTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS CAA 90 bp | ACATCGGGACGCATAGGGAGGGACTTCGTGTTTCCTGATCAAGATTaGGTTCTGCACATCCCAAATCTCCACAAATCCTTTGAAAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: TSGRIGRDFVFPDQD*VLHIPNLHKSFERS Trigger: GCTTCTTTCAAAGGATTTGTGGAGATTTGGGATGTGCAGAACCAAATCTTGATCAGGAAACACGAAGTCCCTCCCTATGCGTCCCGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS TCA 72 bp | TATCTTTGGACAATAGCTTTATACTTCTCCTCCCGGTaGGCATGCAGGATGACAACATCGCTCATCTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: YLWTIALYFSSR*ACRMTTSLIFK Trigger: CTTGAAGATGAGCGATGTTGTCATCCTGCATGCTCACCGGGAGGAGAAGTATAAAGCTATTGTCCAAAGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
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| CDS CAA 72 bp | ATAGGTCCCGCAAGAGGCGAACTTGAGGTTGTGATGTaGTGTGTATCTTTGGACAATAGCTTTATACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: IGPARGELEVVM*CVSLDNSFILL Trigger: GAGAAGTATAAAGCTATTGTCCAAAGATACACACAACATCACAACCTCAAGTTCGCCTCTTGCGGGACCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000178785.2 ENSMUST00000213641.2 ENSMUST00000219454.2 |
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