Pregenerated sensors for TLE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034771Ensembl transcript IDs: ENSMUST00000124854.8, ENSMUST00000131411.2, ENSMUST00000135211.8, ENSMUST00000136341.8, ENSMUST00000143285.8, ENSMUST00000146358.8, ENSMUST00000146916.8
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCATTCCTGGGGCATGTTaGCCTGTCTGTGAGGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: VKPTPGRIRSECKSLIQLIPGAC*PVCEAH Trigger: ATGAGCCTCACAGACAGGTCAACATGCCCCAGGAAT...GAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| 3UTR TCA 72 bp | CCAGCCCCACCCAGCCAGGAGGGAGCAAGCCAGGTATaGGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: PAPPSQEGASQV*AEGPVSRVASH Trigger: ATGGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCTGGCTGGGTGGGGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131411.2 ENSMUST00000135211.8 |
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| CDS-3UTR TCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGGCAGAGGTGACTGGCTaGGCTGGGCCCCGGGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRAEVTG*AGPRGG Trigger: TCCACCCCGGGGCCCAGCTCAGCCAGTCACCTCTGC...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCGCCACCAGCTGGGCCTaGGCAGCCAGTGCCCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPAATSWA*AASAPD Trigger: ATCTGGGGCACTGGCTGCGCAGGCCCAGCTGGTGGC...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCGGTGACTGGCTGAGCTaGGCCCCGGGGTGGACGAGT | + |
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Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPAGDWLS*APGWTS Trigger: ACTCGTCCACCCCGGGGCCCAGCTCAGCCAGTCACC...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | GGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCAGGGGCGATGCTGTCTGTaGGTGCTGCCGGCTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GARVPSGQPSRAGDLKRQGRCCL*VLPAEP Trigger: CGGCTCAGCCGGCAGCACCCACAGACAGCATCGCCC...CTGCCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCCCTGCGGGCAGGAATaGAGAGGGGCGCCTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRPCGQE*RGAPSH Trigger: GTGGGAAGGCGCCCCTCTGCATTCCTGCCCGCAGGG...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | GGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCAGGATGCTGTCTGTGGGTaGTGCCGGCTGAGCCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GARVPSGQPSRAGDLKRQDAVCG*CRLSRQ Trigger: CTGGCGGCTCAGCCGGCAGCACCCACAGACAGCATC...CTGCCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCGGGTGGTCACAGGGCTaGGGGGCTCTGACGGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPAGWSQG*GALTVG Trigger: ACCAACCGTCAGAGCCCCCCAGCCCTGTGACCACCC...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCACAGAGCTGCTGACCTaGGGGGACAGGTGGAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPATELLT*GDRWRP Trigger: CGGCCTCCACCTGTCCCCCCAGGTCAGCAGCTCTGT...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCGGACCTCCACGTGGCTaGTCTCCATCCCCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPAGPPRG*SPSPQP Trigger: TGGCTGTGGGGATGGAGAGCAGCCACGTGGAGGTCC...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131411.2 ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCCACTGCCGCCTCGGCTaGTGGGATGGTCCTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPAHCRLG*WDGPLP Trigger: TGGAAGAGGACCATCCCAGCAGCCGAGGCGGCAGTG...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCGACTCCTCAGGGCGATaGTGTCTGTGGGTGCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPADSSGR*CLWVLP Trigger: CGGCAGCACCCACAGACAGCATCGCCCTGAGGAGTC...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGGTGCCACAGGGGTCTTaGTACCCGGCTGGCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRVPQGS*YPAGPR Trigger: ACGTGGGCCAGCCGGGTAGCAAGACCCCTGTGGCAC...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | GGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCAGCAGCTCTGTCCACTCTaGACCCCTCGGCGTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: GARVPSGQPSRAGDLKRQQLCPL*TPRRPH Trigger: GTGTGGACGCCGAGGGGTCCAGAGTGGACAGAGCTG...CTGCCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | GGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCAGGGCACAGGCTGCATCTaGCCATCCGCAGACACGTGG | + |
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Preference number: 4 (lower is better) Translates to: GARVPSGQPSRAGDLKRQGTGCI*PSADTW Trigger: CCACGTGTCTGCGGATGGCCAGATGCAGCCTGTGCC...CTGCCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | GCCAGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCACACACCACCTCACCGTaGGCCAGCGTGTGTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ARREQARYEQRGPCPEWPHTTSP*ASVCSC Trigger: GCAGCTACACACGCTGGCCCACGGTGAGGTGGTGTG...TGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | GGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCAGGTCTTGCTACCCGGCTaGCCCACGTCCCACACCTTC | + |
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Preference number: 4 (lower is better) Translates to: GARVPSGQPSRAGDLKRQVLLPG*PTSHTF Trigger: GAAGGTGTGGGACGTGGGCCAGCCGGGTAGCAAGAC...CTGCCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR TCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCTGGAGAGGTACCACATaGCCTGGAGGCAGGAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPAWRGTT*PGGRSA Trigger: GGCACTCCTGCCTCCAGGTCATGTGGTACCTCTCCA...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR TCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGTGGAGAGGTCCCCATTaGGGGTGCTGTGGGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRWRGPH*GCCGSP Trigger: TGGGCTCCCACAGCACCCTCAATGGGGACCTCTCCA...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR TCA 90 bp | GGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCAGGGCCCTGGAACTGTCTaGCCATGGCCTGGTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GARVPSGQPSRAGDLKRQGPGTV*PWPGSA Trigger: TGCAGAACCAGGCCATGGTCAGACAGTTCCAGGGCC...CTGCCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCCCTACAATCAGGCTCTaGCCGTCGGGCAGCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPAPTIRL*PSGSSL Trigger: CAAGCTGCTGCCCGACGGGCAGAGCCTGATTGTAGG...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | GCCAGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGGAGGCCAAGGAGGCTaGACTGTCTGTGAGGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: ARREQARYEQRGPCPEWPGGQGG*TVCEVP Trigger: AGGGACCTCACAGACAGTCCAGCCTCCTTGGCCTCC...TGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | GCCAGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGTGGTGAGCCCAAACTaGAGGCCAAGGAGGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: ARREQARYEQRGPCPEWPVVSPN*RPRRLD Trigger: GTCCAGCCTCCTTGGCCTCCAGTTTGGGCTCACCAC...TGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCCGTCCGTGTGGCCCTaGAACTGTCTGACCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRPSVWP*NCLTMA Trigger: GGCCATGGTCAGACAGTTCCAGGGCCACACGGACGG...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | GCCAGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAATATGTCGATGCAGCTaGCCCCGTCCGTGTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: ARREQARYEQRGPCPEWPICRCS*PRPCGP Trigger: AGGGCCACACGGACGGGGCCAGCTGCATCGACATAT...TGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR TCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGGCTGATGCTCCTGAGTaGGGAACGGGACCATCTGGG | + |
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Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRADAPE*GTGPSG Trigger: CCCAGATGGTCCCGTTCCTCACTCAGGAGCATCAGC...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | GGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCAGCGTCGGGCAGCAGCTTaGAGGAGCGGATGTAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: GARVPSGQPSRAGDLKRQRRAAA*RSGCSC Trigger: ACAACTACATCCGCTCCTGCAAGCTGCTGCCCGACG...CTGCCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | GCCAGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAACCATGGCCTGGTTCTaGAGGTCCCAGACCACGATG | + |
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Preference number: 4 (lower is better) Translates to: ARREQARYEQRGPCPEWPTMAWF*RSQTTM Trigger: CATCGTGGTCTGGGACCTGCAGAACCAGGCCATGGT...TGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | GGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCAGGAGAACTTGAAAGGCTaGCCAGACTGCAGCGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: GARVPSGQPSRAGDLKRQENLKG*PDCSGV Trigger: GACCCCGCTGCAGTCTGGCCAGCCTTTCAAGTTCTC...CTGCCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCGGGAAGAACTCCTGCTaGCAGCTCTGTCCACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPAGKNSC*QLCPLW Trigger: CCAGAGTGGACAGAGCTGCCAGCAGGAGTTCTTCCC...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR TCA 90 bp | GCCAGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAACAGCCAACCAGTCCTaGTTGGGACAGTGGCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: ARREQARYEQRGPCPEWPTANQS*LGQWPN Trigger: ATTGGGCCACTGTCCCAATCAGGACTGGTTGGCTGT...TGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131411.2 ENSMUST00000135211.8 |
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| CDS-3UTR TCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCACAGCCAACCAGTCCTaGTTGGGACAGTGGCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPATANQS*LGQWPN Trigger: ATTGGGCCACTGTCCCAATCAGGACTGGTTGGCTGT...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131411.2 ENSMUST00000135211.8 |
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| CDS-3UTR TCA 90 bp | GGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCAGAAGTCAGCTCTGCTTTaGTCCGTGGTGTGGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GARVPSGQPSRAGDLKRQKSALL*SVVWVL Trigger: CAGCACCCACACCACGGATCAAAGCAGAGCTGACTT...CTGCCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | GCCAGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGGTACTTCTCAGGCTTaGGCACATGCAGGACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ARREQARYEQRGPCPEWPGTSQA*AHAGPP Trigger: TGGAGGTCCTGCATGTGCGCAAGCCTGAGAAGTACC...TGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131411.2 ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCGGTACTTCTCAGGCTTaGGCACATGCAGGACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPAGTSQA*AHAGPP Trigger: TGGAGGTCCTGCATGTGCGCAAGCCTGAGAAGTACC...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131411.2 ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCGGTTGTCCTTGCCTGTaGTCACAAACCAGCGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPAGCPCL*SQTSVH Trigger: GTGGACGCTGGTTTGTGAGCACAGGCAAGGACAACC...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131411.2 ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGACGGGGAAGAACTCCTaGTGGCAGCTCTGTCCACTC | + |
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Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRTGKNS*WQLCPL Trigger: GAGTGGACAGAGCTGCCAGCAGGAGTTCTTCCCCGT...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGTTGCGTGGCGAGGGATaGCTGTGCCTACCAGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRLRGEG*LCLPEH Trigger: ATGCTCTGGTAGGCACAGGCATCCCTCGCCACGCAA...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCCGCCTGTGTACACGTaGTGTGTGGAGCTGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRPPVYT*CVELLM Trigger: CATCAGCAGCTCCACACAGCACGTGTACACAGGCGG...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCCCTTCACGCATCCTTTaGCGCCTGTGTACACGTGCT | + |
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Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPAPSRIL*RLCTRA Trigger: AGCACGTGTACACAGGCGGCAAAGGATGCGTGAAGG...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGGATCCGTGGTGTGGGTaGTGCCAGGTCCCAAATGGA | + |
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Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRDPWCG*CQVPNG Trigger: TCCATTTGGGACCTGGCAGCACCCACACCACGGATC...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCTCTGCTTTGATCCGTaGTGTGGGTGCTGCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRLCFDP*CGCCQV Trigger: GACCTGGCAGCACCCACACCACGGATCAAAGCAGAG...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR TCA 90 bp | GCCAGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCACCAGTACTGAGAACTTaGAAGGCTGGCCAGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: ARREQARYEQRGPCPEWPPVLRT*KAGQTA Trigger: TGCAGTCTGGCCAGCCTTTCAAGTTCTCAGTACTGG...TGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGGGTTGTCCTTGCCTGTaGTCACAAACCAGCGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRGCPCL*SQTSVH Trigger: GTGGACGCTGGTTTGTGAGCACAGGCAAGGACAACC...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131411.2 ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCTTGTCTTCAGCTCTCTaGTGTTTCCCACTGCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPALSSAL*CFPLPP Trigger: AGGCGGCAGTGGGAAACAGCAGAGAGCTGAAGACAA...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR GCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGACCTGGAGGCAGGAGTaGCTGTGGGAAGATCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRTWRQE*LWEDRS Trigger: TGAACGATCTTCCCACAGGCACTCCTGCCTCCAGGT...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCACCTCGGAGATGGGGGTaGGATTCAAATGCCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARREQARYEQRGPCPEWPPRRWG*DSNAIR Trigger: TCTGATGGCATTTGAATCGCACCCCCATCTCCGAGG...TGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR TCA 90 bp | GGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCAGAAATGCCATCAGAGGTaGGCGTCCATACACGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GARVPSGQPSRAGDLKRQKCHQR*ASIHDR Trigger: TCTGTCGTGTATGGACGCTCACCTCTGATGGCATTT...CTGCCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGTCAGGGCTATGTCTTTaGTTCTGGGGAGTGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRSGLCL*FWGVVS Trigger: GCTCACCACTCCCCAGAAGCAAAGACATAGCCCTGA...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCACAGATTTCCAGTACTaGGAACTTGAAAGGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPATDFQY*ELERLA Trigger: GGCCAGCCTTTCAAGTTCTCAGTACTGGAAATCTGT...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCTATGTCTTTGCTTCTaGGGAGTGGTGAGCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRLCLCF*GVVSPN Trigger: GTTTGGGCTCACCACTCCCCAGAAGCAAAGACATAG...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR TCA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCACTGGAATTCCTCTTTaGTCCGGTCACAGATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RREQARYEQRGPCPEWPATGIPL*SGHRFP Trigger: TGGAAATCTGTGACCGGATCAAAGAGGAATTCCAGT...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCATATGCATCTCAATGTTaGGTCCGTAGGACATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ARREQARYEQRGPCPEWPYASQC*VRRTSR Trigger: ACGAGATGTCCTACGGACTCAACATTGAGATGCATA...TGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCGGATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGGGGCGATGCTGTCTGTaGGTGCTGCCGGCTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GRRISEFQTSLVYIVSGQGRCCL*VLPAEP Trigger: CGGCTCAGCCGGCAGCACCCACAGACAGCATCGCCC...CTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAATCCGCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCTGTGATGCTGTCTGTGGGTaGTGCCGGCTGAGCCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPTPGRIRSECKSLIQLCDAVCG*CRLSRQ Trigger: CTGGCGGCTCAGCCGGCAGCACCCACAGACAGCATC...ACAGAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR GCA 90 bp | GTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCGTGCCACAGGGGTCTTaGTACCCGGCTGGCCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: VKPTPGRIRSECKSLIQLVPQGS*YPAGPR Trigger: ACGTGGGCCAGCCGGGTAGCAAGACCCCTGTGGCAC...GAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR GCA 90 bp | GTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCTCCCCCACGGTCACCTaGTTGGCTCGGTCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKPTPGRIRSECKSLIQLSPTVT*LARSTA Trigger: GGCTGTGGACCGAGCCAAGCAGGTGACCGTGGGGGA...GAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCTGTACAGAGCTGCTGACCTaGGGGGACAGGTGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KPTPGRIRSECKSLIQLCTELLT*GDRWRP Trigger: CGGCCTCCACCTGTCCCCCCAGGTCAGCAGCTCTGT...ACAGAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR TCA 90 bp | ATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGCCAGTGCTAGCAGAGGTGACTGGCTaGGCTGGGCCCCGGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISEFQTSLVYIVSGQPVLAEVTG*AGPRGG Trigger: TCCACCCCGGGGCCCAGCTCAGCCAGTCACCTCTGC...TAGCACTGGCTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCTGTCCACCCTGGGGACACTaGTGGGGTGCAGCCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: KPTPGRIRSECKSLIQLCPPWGH*WGAAIT Trigger: TGTGATGGCTGCACCCCATCAGTGTCCCCAGGGTGG...ACAGAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR GCA 90 bp | GGCAGGCGGATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGCACTGCCGCCTCGGCTaGTGGGATGGTCCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRRISEFQTSLVYIVSGQHCRLG*WDGPLP Trigger: TGGAAGAGGACCATCCCAGCAGCCGAGGCGGCAGTG...CTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAATCCGCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCAGAAGATGATTCTTTaGACTGAAAAATGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGARVPSGQPSRAGDLKRQKMIL*TEKCWP Trigger: GGGCCAGCATTTTTCAGTCCAAAGAATCATCTTCTG...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000131411.2 ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | GGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCAGTGTACTTATTATTCCTaGAGATGTCGCAGCTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GARVPSGQPSRAGDLKRQCTYYS*RCRSSV Trigger: TACTGAGCTGCGACATCTCCAGGAATAATAAGTACA...CTGCCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131411.2 ENSMUST00000135211.8 |
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| CDS-3UTR CCA 90 bp | GTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCCACACCACCTCACCGTaGGCCAGCGTGTGTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VKPTPGRIRSECKSLIQLHTTSP*ASVCSC Trigger: GCAGCTACACACGCTGGCCCACGGTGAGGTGGTGTG...GAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR TCA 90 bp | GGCAGGCGGATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGTGGAGAGGTACCACATaGCCTGGAGGCAGGAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRRISEFQTSLVYIVSGQWRGTT*PGGRSA Trigger: GGCACTCCTGCCTCCAGGTCATGTGGTACCTCTCCA...CTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAATCCGCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR TCA 90 bp | AAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCTGTGGCCCTGGAACTGTCTaGCCATGGCCTGGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPTPGRIRSECKSLIQLCGPGTV*PWPGSA Trigger: TGCAGAACCAGGCCATGGTCAGACAGTTCCAGGGCC...ACAGAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR GCA 90 bp | AAGATGGTTCAGTTGGTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAACCCTGCGGGCAGGAATaGAGAGGGGCGCCTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KMVQLVKPTPGRIRSECKPCGQE*RGAPSH Trigger: GTGGGAAGGCGCCCCTCTGCATTCCTGCCCGCAGGG...TTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTACCAACTGAACCATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR GCA 90 bp | GGCAGGCGGATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGCCTACAATCAGGCTCTaGCCGTCGGGCAGCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRRISEFQTSLVYIVSGQPTIRL*PSGSSL Trigger: CAAGCTGCTGCCCGACGGGCAGAGCCTGATTGTAGG...CTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAATCCGCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR CCA 90 bp | GGCAGGCGGATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGGGAGGCCAAGGAGGCTaGACTGTCTGTGAGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRRISEFQTSLVYIVSGQGGQGG*TVCEVP Trigger: AGGGACCTCACAGACAGTCCAGCCTCCTTGGCCTCC...CTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAATCCGCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR CCA 90 bp | ATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGCCAGTGCTAGGTGACTGGCTGAGCTaGGCCCCGGGGTGGACGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISEFQTSLVYIVSGQPVLGDWLS*APGWTS Trigger: ACTCGTCCACCCCGGGGCCCAGCTCAGCCAGTCACC...TAGCACTGGCTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR GCA 90 bp | GTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCTTGCGTGGCGAGGGATaGCTGTGCCTACCAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VKPTPGRIRSECKSLIQLLRGEG*LCLPEH Trigger: ATGCTCTGGTAGGCACAGGCATCCCTCGCCACGCAA...GAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR GCA 90 bp | AAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCTGTCGTCGGGCAGCAGCTTaGAGGAGCGGATGTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KPTPGRIRSECKSLIQLCRRAAA*RSGCSC Trigger: ACAACTACATCCGCTCCTGCAAGCTGCTGCCCGACG...ACAGAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR GCA 90 bp | GTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCGATCCGTGGTGTGGGTaGTGCCAGGTCCCAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: VKPTPGRIRSECKSLIQLDPWCG*CQVPNG Trigger: TCCATTTGGGACCTGGCAGCACCCACACCACGGATC...GAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR GCA 90 bp | AAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCTGTACCATGGCCTGGTTCTaGAGGTCCCAGACCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: KPTPGRIRSECKSLIQLCTMAWF*RSQTTM Trigger: CATCGTGGTCTGGGACCTGCAGAACCAGGCCATGGT...ACAGAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR CCA 90 bp | GTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCGGGAAGAACTCCTGCTaGCAGCTCTGTCCACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VKPTPGRIRSECKSLIQLGKNSC*QLCPLW Trigger: CCAGAGTGGACAGAGCTGCCAGCAGGAGTTCTTCCC...GAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR CCA 90 bp | GTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCCTCTGCTTTGATCCGTaGTGTGGGTGCTGCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VKPTPGRIRSECKSLIQLLCFDP*CGCCQV Trigger: GACCTGGCAGCACCCACACCACGGATCAAAGCAGAG...GAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGGTTCAGTTGGTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATGGAGAGGTCCCCATTaGGGGTGCTGTGGGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KMVQLVKPTPGRIRSECKWRGPH*GCCGSP Trigger: TGGGCTCCCACAGCACCCTCAATGGGGACCTCTCCA...TTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTACCAACTGAACCATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR GCA 90 bp | ATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGCCAGTGCTAGGACCTCCACGTGGCTaGTCTCCATCCCCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISEFQTSLVYIVSGQPVLGPPRG*SPSPQP Trigger: TGGCTGTGGGGATGGAGAGCAGCCACGTGGAGGTCC...TAGCACTGGCTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR GCA 90 bp | AAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCTGTGGTTGTCCTTGCCTGTaGTCACAAACCAGCGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KPTPGRIRSECKSLIQLCGCPCL*SQTSVH Trigger: GTGGACGCTGGTTTGTGAGCACAGGCAAGGACAACC...ACAGAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGTTTTAAAGAGAGCCAGGAAGATGGTTCAGTTGGTAAAGCCCACACCAGCCACCAGCTGGGCCTaGGCAGCCAGTGCCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFVLKRARKMVQLVKPTPATSWA*AASAPD Trigger: ATCTGGGGCACTGGCTGCGCAGGCCCAGCTGGTGGC...TGGTGTGGGCTTTACCAACTGAACCATCTTCCTGGCTCTCTTTAAAACAAAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGGTTCAGTTGGTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAAGACTCCTCAGGGCGATaGTGTCTGTGGGTGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KMVQLVKPTPGRIRSECKDSSGR*CLWVLP Trigger: CGGCAGCACCCACAGACAGCATCGCCCTGAGGAGTC...TTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTACCAACTGAACCATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR GCA 90 bp | GTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCCCTTCACGCATCCTTTaGCGCCTGTGTACACGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VKPTPGRIRSECKSLIQLPSRIL*RLCTRA Trigger: AGCACGTGTACACAGGCGGCAAAGGATGCGTGAAGG...GAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCGGATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGAGTGTGGATAGCTGGTaGCACCCTGGGGACACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRRISEFQTSLVYIVSGQSVDSW*HPGDTD Trigger: ATCAGTGTCCCCAGGGTGGCACCAGCTATCCACACT...CTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAATCCGCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGTTTTTGTTTTAAAGAGAGCCAGGAAGATGGTTCAGTTGGTAAAGCCCACGGGTGGTCACAGGGCTaGGGGGCTCTGACGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSFCFKESQEDGSVGKAHGWSQG*GALTVG Trigger: ACCAACCGTCAGAGCCCCCCAGCCCTGTGACCACCC...GTGGGCTTTACCAACTGAACCATCTTCCTGGCTCTCTTTAAAACAAAAACTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CCA 90 bp | AAGATGGTTCAGTTGGTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAAGTCTTGCTACCCGGCTaGCCCACGTCCCACACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KMVQLVKPTPGRIRSECKVLLPG*PTSHTF Trigger: GAAGGTGTGGGACGTGGGCCAGCCGGGTAGCAAGAC...TTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTACCAACTGAACCATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGCCAGTGCTACCGTCCGTGTGGCCCTaGAACTGTCTGACCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISEFQTSLVYIVSGQPVLPSVWP*NCLTMA Trigger: GGCCATGGTCAGACAGTTCCAGGGCCACACGGACGG...TAGCACTGGCTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGCCAGTGCTACCACGGTCACCTGCTTaGCTCGGTCCACAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISEFQTSLVYIVSGQPVLPRSPA*LGPQPG Trigger: TCCAGGCTGTGGACCGAGCCAAGCAGGTGACCGTGG...TAGCACTGGCTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR GCA 90 bp | GTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCTCAGGGCTATGTCTTTaGTTCTGGGGAGTGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKPTPGRIRSECKSLIQLSGLCL*FWGVVS Trigger: GCTCACCACTCCCCAGAAGCAAAGACATAGCCCTGA...GAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGTTTTTGTTTTAAAGAGAGCCAGGAAGATGGTTCAGTTGGTAAAGCCCACCAGCTCTGTCCACTCTaGACCCCTCGGCGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PSFCFKESQEDGSVGKAHQLCPL*TPRRPH Trigger: GTGTGGACGCCGAGGGGTCCAGAGTGGACAGAGCTG...GTGGGCTTTACCAACTGAACCATCTTCCTGGCTCTCTTTAAAACAAAAACTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGTTTTTGTTTTAAAGAGAGCCAGGAAGATGGTTCAGTTGGTAAAGCCCACGCTGATGCTCCTGAGTaGGGAACGGGACCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSFCFKESQEDGSVGKAHADAPE*GTGPSG Trigger: CCCAGATGGTCCCGTTCCTCACTCAGGAGCATCAGC...GTGGGCTTTACCAACTGAACCATCTTCCTGGCTCTCTTTAAAACAAAAACTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGCCAGTGCTACCGCCTGTGTACACGTaGTGTGTGGAGCTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ISEFQTSLVYIVSGQPVLPPVYT*CVELLM Trigger: CATCAGCAGCTCCACACAGCACGTGTACACAGGCGG...TAGCACTGGCTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGTTTTAAAGAGAGCCAGGAAGATGGTTCAGTTGGTAAAGCCCACACCAGGCACAGGCTGCATCTaGCCATCCGCAGACACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFVLKRARKMVQLVKPTPGTGCI*PSADTW Trigger: CCACGTGTCTGCGGATGGCCAGATGCAGCCTGTGCC...TGGTGTGGGCTTTACCAACTGAACCATCTTCCTGGCTCTCTTTAAAACAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGTTTTTGTTTTAAAGAGAGCCAGGAAGATGGTTCAGTTGGTAAAGCCCACATATGTCGATGCAGCTaGCCCCGTCCGTGTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSFCFKESQEDGSVGKAHICRCS*PRPCGP Trigger: AGGGCCACACGGACGGGGCCAGCTGCATCGACATAT...GTGGGCTTTACCAACTGAACCATCTTCCTGGCTCTCTTTAAAACAAAAACTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCGGATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGCAAAGGAGACAGTCTTaGCCAGTGTGGATAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRRISEFQTSLVYIVSGQQRRQS*PVWIAG Trigger: ACCAGCTATCCACACTGGCCAAGACTGTCTCCTTTG...CTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAATCCGCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGGTTCAGTTGGTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAAACAGCCAACCAGTCCTaGTTGGGACAGTGGCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KMVQLVKPTPGRIRSECKTANQS*LGQWPN Trigger: ATTGGGCCACTGTCCCAATCAGGACTGGTTGGCTGT...TTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTACCAACTGAACCATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGCGGATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGACAGATTTCCAGTACTaGGAACTTGAAAGGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRRISEFQTSLVYIVSGQTDFQY*ELERLA Trigger: GGCCAGCCTTTCAAGTTCTCAGTACTGGAAATCTGT...CTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAATCCGCCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGCCAGTGCTAAAGTCAGCTCTGCTTTaGTCCGTGGTGTGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISEFQTSLVYIVSGQPVLKSALL*SVVWVL Trigger: CAGCACCCACACCACGGATCAAAGCAGAGCTGACTT...TAGCACTGGCTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGGTTCAGTTGGTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAAGGTACTTCTCAGGCTTaGGCACATGCAGGACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KMVQLVKPTPGRIRSECKGTSQA*AHAGPP Trigger: TGGAGGTCCTGCATGTGCGCAAGCCTGAGAAGTACC...TTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTACCAACTGAACCATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGTTTTTGTTTTAAAGAGAGCCAGGAAGATGGTTCAGTTGGTAAAGCCCACACGGGGAAGAACTCCTaGTGGCAGCTCTGTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PSFCFKESQEDGSVGKAHTGKNS*WQLCPL Trigger: GAGTGGACAGAGCTGCCAGCAGGAGTTCTTCCCCGT...GTGGGCTTTACCAACTGAACCATCTTCCTGGCTCTCTTTAAAACAAAAACTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGGTTCAGTTGGTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAAACCTGGAGGCAGGAGTaGCTGTGGGAAGATCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KMVQLVKPTPGRIRSECKTWRQE*LWEDRS Trigger: TGAACGATCTTCCCACAGGCACTCCTGCCTCCAGGT...TTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTACCAACTGAACCATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGTTTTAAAGAGAGCCAGGAAGATGGTTCAGTTGGTAAAGCCCACACCAGTGGTGAGCCCAAACTaGAGGCCAAGGAGGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VFVLKRARKMVQLVKPTPVVSPN*RPRRLD Trigger: GTCCAGCCTCCTTGGCCTCCAGTTTGGGCTCACCAC...TGGTGTGGGCTTTACCAACTGAACCATCTTCCTGGCTCTCTTTAAAACAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGCCAGTGCTACCAGTACTGAGAACTTaGAAGGCTGGCCAGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISEFQTSLVYIVSGQPVLPVLRT*KAGQTA Trigger: TGCAGTCTGGCCAGCCTTTCAAGTTCTCAGTACTGG...TAGCACTGGCTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGCCAGTGCTATTGTCTTCAGCTCTCTaGTGTTTCCCACTGCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISEFQTSLVYIVSGQPVLLSSAL*CFPLPP Trigger: AGGCGGCAGTGGGAAACAGCAGAGAGCTGAAGACAA...TAGCACTGGCTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CCA 90 bp | GTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCCAGAAGATGATTCTTTaGACTGAAAAATGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VKPTPGRIRSECKSLIQLQKMIL*TEKCWP Trigger: GGGCCAGCATTTTTCAGTCCAAAGAATCATCTTCTG...GAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGTTTTTGTTTTAAAGAGAGCCAGGAAGATGGTTCAGTTGGTAAAGCCCACCTATGTCTTTGCTTCTaGGGAGTGGTGAGCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PSFCFKESQEDGSVGKAHLCLCF*GVVSPN Trigger: GTTTGGGCTCACCACTCCCCAGAAGCAAAGACATAG...GTGGGCTTTACCAACTGAACCATCTTCCTGGCTCTCTTTAAAACAAAAACTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGCCAGTGCTATATGCATCTCAATGTTaGGTCCGTAGGACATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ISEFQTSLVYIVSGQPVLYASQC*VRRTSR Trigger: ACGAGATGTCCTACGGACTCAACATTGAGATGCATA...TAGCACTGGCTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| 3UTR CAA 72 bp | GTTTTTGTTTTAAAGAGAGCCAGGAAGATGGTTCAGTaGGTAAAGCCCACACCAGGCAGGATAAGGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VFVLKRARKMVQ*VKPTPGRIRSE Trigger: CTCACTCCTTATCCTGCCTGGTGTGGGCTTTACCAACTGAACCATCTTCCTGGCTCTCTTTAAAACAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTTGTTTTAAAGAGAGCCAGGAAGATGGTTCAGTTGGTAAAGCCCACACCAACTGGAATTCCTCTTTaGTCCGGTCACAGATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFVLKRARKMVQLVKPTPTGIPL*SGHRFP Trigger: TGGAAATCTGTGACCGGATCAAAGAGGAATTCCAGT...TGGTGTGGGCTTTACCAACTGAACCATCTTCCTGGCTCTCTTTAAAACAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCTGAGTTCCAGACCAGCCTGGTTTACATAGTTTCAGGACAGCCAGTGCTATGTACTTATTATTCCTaGAGATGTCGCAGCTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISEFQTSLVYIVSGQPVLCTYYS*RCRSSV Trigger: TACTGAGCTGCGACATCTCCAGGAATAATAAGTACA...TAGCACTGGCTGTCCTGAAACTATGTAAACCAGGCTGGTCTGGAACTCAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS CCA 90 bp | TCGGCGTCCACACCCACACGGTCTTCCTTTACGGCAGCCACCAGCTaGGCCTGCGCAGCCAGTGCCCCAGATAGGGCCAGCAGCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SASTPTRSSFTAATS*ACAASAPDRASSPV Trigger: CACTGGGCTGCTGGCCCTATCTGGGGCACTGGCTGCGCAGGCCCAGCTGGTGGCTGCCGTAAAGGAAGACCGTGTGGGTGTGGACGCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS TCA 90 bp | GGAGTGGTGAGCCCAAACTGGAGGCCAAGGAGGCTGGACTGTCTGTaGGGTCCCTGCGGGCAGGAATGCAGAGGGGCGCCTTCCCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: GVVSPNWRPRRLDCL*GPCGQECRGAPSHK Trigger: CTTGTGGGAAGGCGCCCCTCTGCATTCCTGCCCGCAGGGACCTCACAGACAGTCCAGCCTCCTTGGCCTCCAGTTTGGGCTCACCACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGCCACCTTCACGCATCCTTaGCCGCCTGTGTACACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RREQARYEQRGPCPEWPATFTHP*PPVYTC Trigger: GCACGTGTACACAGGCGGCAAAGGATGCGTGAAGGT...GGCTGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS-3UTR CAA 90 bp | GCCAGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCAGGCCCTGACAGATCCTaGTCTTCAGCTCTCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ARREQARYEQRGPCPEWPGPDRS*SSALCC Trigger: ACAGCAGAGAGCTGAAGACAAGGATCTGTCAGGGCC...TGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS GCA 90 bp | GATCCTTGTCTTCAGCTCTCTGCTGTTTCCCACTGCCGCCTCGGCTaGTGGGATGGTCCTCTTCCACCAGACTCTCAGGGGGAGACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DPCLQLSAVSHCRLG*WDGPLPPDSQGETG Trigger: CCCCGTCTCCCCCTGAGAGTCTGGTGGAAGAGGACCATCCCAGCAGCCGAGGCGGCAGTGGGAAACAGCAGAGAGCTGAAGACAAGGATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS CCA 90 bp | CCTTGTCTTCAGCTCTCTGCTGTTTCCCACTGCCGCCTCGGCTGCTaGGATGGTCCTCTTCCACCAGACTCTCAGGGGGAGACGGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PCLQLSAVSHCRLGC*DGPLPPDSQGETGK Trigger: CTTCCCCGTCTCCCCCTGAGAGTCTGGTGGAAGAGGACCATCCCAGCAGCCGAGGCGGCAGTGGGAAACAGCAGAGAGCTGAAGACAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS-3UTR CAA 90 bp | GGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCAGTTGAGCAGGTTGTCCTaGCCTGTGCTCACAAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GARVPSGQPSRAGDLKRQLSRLS*PVLTNQ Trigger: CTGGTTTGTGAGCACAGGCAAGGACAACCTGCTCAA...CTGCCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131411.2 ENSMUST00000135211.8 |
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| CDS-3UTR CAA 90 bp | GCCAGGAGGGAGCAAGCCAGGTATGAGCAGAGGGGCCCGTGTCCCGAGTGGCCATTGAGCAGGTTGTCCTaGCCTGTGCTCACAAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARREQARYEQRGPCPEWPLSRLS*PVLTNQ Trigger: CTGGTTTGTGAGCACAGGCAAGGACAACCTGCTCAA...TGGCCACTCGGGACACGGGCCCCTCTGCTCATACCTGGCTTGCTCCCTCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131411.2 ENSMUST00000135211.8 |
||
| CDS-3UTR CAA 90 bp | GGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGCAGTCCAGTACTGAGAACTaGAAAGGCTGGCCAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GARVPSGQPSRAGDLKRQSSTEN*KGWPDC Trigger: GCAGTCTGGCCAGCCTTTCAAGTTCTCAGTACTGGA...CTGCCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS GCA 90 bp | GCTGGTACTTCTCAGGCTTGCGCACATGCAGGACCTCCACGTGGCTaGTCTCCATCCCCACAGCCAACCAGTCCTGATTGGGACAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGTSQACAHAGPPRG*SPSPQPTSPDWDSG Trigger: GCCACTGTCCCAATCAGGACTGGTTGGCTGTGGGGATGGAGAGCAGCCACGTGGAGGTCCTGCATGTGCGCAAGCCTGAGAAGTACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000124854.8 ENSMUST00000131411.2 ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS CCA 90 bp | TCTTCAGCTCTCTGCTGTTTCCCACTGCCGCCTCGGCTGCTGGGATaGTCCTCTTCCACCAGACTCTCAGGGGGAGACGGGGAAGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: SSALCCFPLPPRLLG*SSSTRLSGGDGEEL Trigger: GAGTTCTTCCCCGTCTCCCCCTGAGAGTCTGGTGGAAGAGGACCATCCCAGCAGCCGAGGCGGCAGTGGGAAACAGCAGAGAGCTGAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGGGCCCGTGTCCCGAGTGGCCAGCCATCCAGGGCAGGTGACCTGAAAAGGTTCAGGGCTATGTCTTaGCTTCTGGGGAGTGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RGARVPSGQPSRAGDLKRFRAMS*LLGSGE Trigger: CTCACCACTCCCCAGAAGCAAAGACATAGCCCTGAA...CCTTTTCAGGTCACCTGCCCTGGATGGCTGGCCACTCGGGACACGGGCCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
||
| CDS GCA 90 bp | TGTAGTTGTCTCGGTTCAGGCAATCCAGCTGTGCCACAGGGGTCTTaGTACCCGGCTGGCCCACGTCCCACACCTTCACGCATCCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSCLGSGNPAVPQGS*YPAGPRPTPSRILC Trigger: GCAAAGGATGCGTGAAGGTGTGGGACGTGGGCCAGCCGGGTAGCAAGACCCCTGTGGCACAGCTGGATTGCCTGAACCGAGACAACTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
||
| CDS-3UTR CAA 90 bp | GTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCCCCACGGTCACCTGCTaGGCTCGGTCCACAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VKPTPGRIRSECKSLIQLPTVTC*ARSTAW Trigger: CCAGGCTGTGGACCGAGCCAAGCAGGTGACCGTGGG...GAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS GCA 90 bp | ACGAGTCCTGGGGTGGAGAGGTACCACATGACCTGGAGGCAGGAGTaGCTGTGGGAAGATCGTTCAGGGCTATGTCTTTGCTTCTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TSPGVERYHMTWRQE*LWEDRSGLCLCFWG Trigger: TCCCCAGAAGCAAAGACATAGCCCTGAACGATCTTCCCACAGGCACTCCTGCCTCCAGGTCATGTGGTACCTCTCCACCCCAGGACTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS GCA 90 bp | ACAGGGATGCCAGGCAAGGAGACAGACGAGCCTCGGAGATGGGGGTaGGATTCAAATGCCATCAGAGGTGAGCGTCCATACACGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TGMPGKETDEPRRWG*DSNAIRGERPYTTE Trigger: CTCTGTCGTGTATGGACGCTCACCTCTGATGGCATTTGAATCGCACCCCCATCTCCGAGGCTCGTCTGTCTCCTTGCCTGGCATCCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
||
| CDS CCA 90 bp | TTAGCCACAGGGATGCCAGGCAAGGAGACAGACGAGCCTCGGAGATaGGGGTGCGATTCAAATGCCATCAGAGGTGAGCGTCCATACACG | + |
|
Preference number: 5 (lower is better) Translates to: LATGMPGKETDEPRR*GCDSNAIRGERPYT Trigger: CGTGTATGGACGCTCACCTCTGATGGCATTTGAATCGCACCCCCATCTCCGAGGCTCGTCTGTCTCCTTGCCTGGCATCCCTGTGGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
||
| CDS CCA 90 bp | TTAGCCACAGGGATGCCAGGCAAGGAGACAGACGAGCCTCGGAGATaGGGGTGCGATTCAAATGCCATCTGCAGAGGTGAGCGTCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: LATGMPGKETDEPRR*GCDSNAICRGERPY Trigger: GTATGGACGCTCACCTCTGCAGATGGCATTTGAATCGCACCCCCATCTCCGAGGCTCGTCTGTCTCCTTGCCTGGCATCCCTGTGGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS TCA 90 bp | TGTGGGAAGATCGTTCAGGGCTATGTCTTTGCTTCTGGGGAGTGGTaGGCCCAAACTGGAGGCCAAGGAGGCTGGACTGTCTGTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CGKIVQGYVFASGEW*AQTGGQGGWTVCEV Trigger: GACCTCACAGACAGTCCAGCCTCCTTGGCCTCCAGTTTGGGCTCACCACTCCCCAGAAGCAAAGACATAGCCCTGAACGATCTTCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
||
| CDS CCA 90 bp | GTAGGACATCTCGTAGTACTGCAAAGGAGACAGTCTTGGCCAGTGTaGATAGCTGGTGCCACCCTGGGGACACTGATGGGGTGCAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VGHLVVLQRRQSWPV*IAGATLGTLMGCSH Trigger: ATGGCTGCACCCCATCAGTGTCCCCAGGGTGGCACCAGCTATCCACACTGGCCAAGACTGTCTCCTTTGCAGTACTACGAGATGTCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS CCA 90 bp | GTTGAGTCCGTAGGACATCTCGTAGTACTGCAAAGGAGACAGTCTTaGCCAGTGTGGATAGCTGGTGCCACCCTGGGGACACTGATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VESVGHLVVLQRRQS*PVWIAGATLGTLMG Trigger: CCCCATCAGTGTCCCCAGGGTGGCACCAGCTATCCACACTGGCCAAGACTGTCTCCTTTGCAGTACTACGAGATGTCCTACGGACTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCTGTACCTTCACGCATCCTTaGCCGCCTGTGTACACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KPTPGRIRSECKSLIQLCTFTHP*PPVYTC Trigger: GCACGTGTACACAGGCGGCAAAGGATGCGTGAAGGT...ACAGAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAATCCCTGATCCAGCTCTGTTCCAGTACTGAGAACTaGAAAGGCTGGCCAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: KPTPGRIRSECKSLIQLCSSTEN*KGWPDC Trigger: GCAGTCTGGCCAGCCTTTCAAGTTCTCAGTACTGGA...ACAGAGCTGGATCAGGGATTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
||
| CDS TCA 90 bp | TACCAGGTTATAGTCACTCTTGTCTTCCTCACTGTCATAAGGCCCTaGCAGATCCTTGTCTTCAGCTCTCTGCTGTTTCCCACTGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: YQVIVTLVFLTVIRP*QILVFSSLLFPTAA Trigger: GGCGGCAGTGGGAAACAGCAGAGAGCTGAAGACAAGGATCTGTCAGGGCCTTATGACAGTGAGGAAGACAAGAGTGACTATAACCTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS-3UTR CAA 90 bp | AAGATGGTTCAGTTGGTAAAGCCCACACCAGGCAGGATAAGGAGTGAGTGTAAAGCAAAGGAGACAGTCTaGGCCAGTGTGGATAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: KMVQLVKPTPGRIRSECKAKETV*ASVDSW Trigger: CCAGCTATCCACACTGGCCAAGACTGTCTCCTTTGC...TTTACACTCACTCCTTATCCTGCCTGGTGTGGGCTTTACCAACTGAACCATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR CAA 90 bp | CCCAGTTTTTGTTTTAAAGAGAGCCAGGAAGATGGTTCAGTTGGTAAAGCCCACGGCCCTGACAGATCCTaGTCTTCAGCTCTCTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: PSFCFKESQEDGSVGKAHGPDRS*SSALCC Trigger: ACAGCAGAGAGCTGAAGACAAGGATCTGTCAGGGCC...GTGGGCTTTACCAACTGAACCATCTTCCTGGCTCTCTTTAAAACAAAAACTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR CAA 90 bp | CCCAGTTTTTGTTTTAAAGAGAGCCAGGAAGATGGTTCAGTTGGTAAAGCCCACTTGAGCAGGTTGTCCTaGCCTGTGCTCACAAACCAG | + |
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Preference number: 5 (lower is better) Translates to: PSFCFKESQEDGSVGKAHLSRLS*PVLTNQ Trigger: CTGGTTTGTGAGCACAGGCAAGGACAACCTGCTCAA...GTGGGCTTTACCAACTGAACCATCTTCCTGGCTCTCTTTAAAACAAAAACTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS-3UTR CAA 90 bp | GTTTTTGTTTTAAAGAGAGCCAGGAAGATGGTTCAGTTGGTAAAGCCCACACCATTCAGGGCTATGTCTTaGCTTCTGGGGAGTGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: VFVLKRARKMVQLVKPTPFRAMS*LLGSGE Trigger: CTCACCACTCCCCAGAAGCAAAGACATAGCCCTGAA...TGGTGTGGGCTTTACCAACTGAACCATCTTCCTGGCTCTCTTTAAAACAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS GCA 72 bp | GGTCAGGGGACTCCTCAGGGCGATGCTGTCTGTGGGTaGTGCCGGCTGAGCCGCCAGCTGGCAGAGGTGACT | + |
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Preference number: 6 (lower is better) Translates to: GQGTPQGDAVCG*CRLSRQLAEVT Trigger: AGTCACCTCTGCCAGCTGGCGGCTCAGCCGGCAGCACCCACAGACAGCATCGCCCTGAGGAGTCCCCTGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS CCA 72 bp | ACACCCACACGGTCTTCCTTTACGGCAGCCACCAGCTaGGCCTGCGCAGCCAGTGCCCCAGATAGGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TPTRSSFTAATS*ACAASAPDRAS Trigger: GCTGGCCCTATCTGGGGCACTGGCTGCGCAGGCCCAGCTGGTGGCTGCCGTAAAGGAAGACCGTGTGGGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS CCA 72 bp | ACAAGGTCAGGGGACTCCTCAGGGCGATGCTGTCTGTaGGTGCTGCCGGCTGAGCCGCCAGCTGGCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: TRSGDSSGRCCL*VLPAEPPAGRG Trigger: ACCTCTGCCAGCTGGCGGCTCAGCCGGCAGCACCCACAGACAGCATCGCCCTGAGGAGTCCCCTGACCTTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS GCA 72 bp | GGGCCAGCGTGTGTAGCTGCCTTGCGTGGCGAGGGATaGCTGTGCCTACCAGAGCATCAGACGGGAAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: GPACVAALRGEG*LCLPEHQTGRA Trigger: TGCCCTTCCCGTCTGATGCTCTGGTAGGCACAGGCATCCCTCGCCACGCAAGGCAGCTACACACGCTGGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS CCA 72 bp | CTCTGCTGTTTCCCACTGCCGCCTCGGCTGCTGGGATaGTCCTCTTCCACCAGACTCTCAGGGGGAGACGGG | + |
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Preference number: 6 (lower is better) Translates to: LCCFPLPPRLLG*SSSTRLSGGDG Trigger: CCCGTCTCCCCCTGAGAGTCTGGTGGAAGAGGACCATCCCAGCAGCCGAGGCGGCAGTGGGAAACAGCAGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS GCA 72 bp | GCGTGTGTAGCTGCCTTGCGTGGCGAGGGATGCCTGTaGCTACCAGAGCATCAGACGGGAAGGGCACAGGCT | + |
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Preference number: 6 (lower is better) Translates to: ACVAALRGEGCL*LPEHQTGRAQA Trigger: AGCCTGTGCCCTTCCCGTCTGATGCTCTGGTAGGCACAGGCATCCCTCGCCACGCAAGGCAGCTACACACGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS CCA 72 bp | CAGCTCTCTGCTGTTTCCCACTGCCGCCTCGGCTGCTaGGATGGTCCTCTTCCACCAGACTCTCAGGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: QLSAVSHCRLGC*DGPLPPDSQGE Trigger: CTCCCCCTGAGAGTCTGGTGGAAGAGGACCATCCCAGCAGCCGAGGCGGCAGTGGGAAACAGCAGAGAGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS CAA 72 bp | ACACCACCTCACCGTGGGCCAGCGTGTGTAGCTGCCTaGCGTGGCGAGGGATGCCTGTGCCTACCAGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: TPPHRGPACVAA*RGEGCLCLPEH Trigger: ATGCTCTGGTAGGCACAGGCATCCCTCGCCACGCAAGGCAGCTACACACGCTGGCCCACGGTGAGGTGGTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS GCA 72 bp | GCGGATGTAGTTGTCTCGGTTCAGGCAATCCAGCTGTaGCACAGGGGTCTTGCTACCCGGCTGGCCCACGTC | + |
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Preference number: 6 (lower is better) Translates to: ADVVVSVQAIQL*HRGLATRLAHV Trigger: GACGTGGGCCAGCCGGGTAGCAAGACCCCTGTGGCACAGCTGGATTGCCTGAACCGAGACAACTACATCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS CCA 72 bp | TGGACGAGTCCTGGGGTGGAGAGGTACCACATGACCTaGAGGCAGGAGTGCCTGTGGGAAGATCGTTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: WTSPGVERYHMT*RQECLWEDRSG Trigger: CCCTGAACGATCTTCCCACAGGCACTCCTGCCTCCAGGTCATGTGGTACCTCTCCACCCCAGGACTCGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS CCA 72 bp | GGGATGCCAGGCAAGGAGACAGACGAGCCTCGGAGATaGGGGTGCGATTCAAATGCCATCTGCAGAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: GMPGKETDEPRR*GCDSNAICRGE Trigger: CTCACCTCTGCAGATGGCATTTGAATCGCACCCCCATCTCCGAGGCTCGTCTGTCTCCTTGCCTGGCATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS CAA 90 bp | CTGGAGGCAGGAGTGCCTGTGGGAAGATCGTTCAGGGCTATGTCTTaGCTTCTGGGGAGTGGTGAGCCCAAACTGGAGGCCAAGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LEAGVPVGRSFRAMS*LLGSGEPKLEAKEA Trigger: AGCCTCCTTGGCCTCCAGTTTGGGCTCACCACTCCCCAGAAGCAAAGACATAGCCCTGAACGATCTTCCCACAGGCACTCCTGCCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS GCA 72 bp | CCAGGCAAGGAGACAGACGAGCCTCGGAGATGGGGGTaGGATTCAAATGCCATCAGAGGTGAGCGTCCATAC | + |
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Preference number: 6 (lower is better) Translates to: PGKETDEPRRWG*DSNAIRGERPY Trigger: GTATGGACGCTCACCTCTGATGGCATTTGAATCGCACCCCCATCTCCGAGGCTCGTCTGTCTCCTTGCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135211.8 |
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| CDS TCA 72 bp | ATCGTTCAGGGCTATGTCTTTGCTTCTGGGGAGTGGTaGGCCCAAACTGGAGGCCAAGGAGGCTGGACTGTC | + |
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Preference number: 6 (lower is better) Translates to: IVQGYVFASGEW*AQTGGQGGWTV Trigger: GACAGTCCAGCCTCCTTGGCCTCCAGTTTGGGCTCACCACTCCCCAGAAGCAAAGACATAGCCCTGAACGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS GCA 72 bp | GAGTGCCTGTGGGAAGATCGTTCAGGGCTATGTCTTTaGTTCTGGGGAGTGGTGAGCCCAAACTGGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: ECLWEDRSGLCL*FWGVVSPNWRP Trigger: TGGCCTCCAGTTTGGGCTCACCACTCCCCAGAAGCAAAGACATAGCCCTGAACGATCTTCCCACAGGCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS CAA 72 bp | CGTAGGACATCTCGTAGTACTGCAAAGGAGACAGTCTaGGCCAGTGTGGATAGCTGGTGCCACCCTGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: RRTSRSTAKETV*ASVDSWCHPGD Trigger: GTCCCCAGGGTGGCACCAGCTATCCACACTGGCCAAGACTGTCTCCTTTGCAGTACTACGAGATGTCCTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS CCA 72 bp | GTAGGACATCTCGTAGTACTGCAAAGGAGACAGTCTTaGCCAGTGTGGATAGCTGGTGCCACCCTGGGGACA | + |
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Preference number: 6 (lower is better) Translates to: VGHLVVLQRRQS*PVWIAGATLGT Trigger: TGTCCCCAGGGTGGCACCAGCTATCCACACTGGCCAAGACTGTCTCCTTTGCAGTACTACGAGATGTCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146358.8 |
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| CDS CAA 72 bp | TCTTTGATCCGGTCACAGATTTCCAGTACTGAGAACTaGAAAGGCTGGCCAGACTGCAGCGGGGTCGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SLIRSQISSTEN*KGWPDCSGVGC Trigger: GCACCCGACCCCGCTGCAGTCTGGCCAGCCTTTCAAGTTCTCAGTACTGGAAATCTGTGACCGGATCAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000135211.8 ENSMUST00000136341.8 ENSMUST00000143285.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS TCA 72 bp | ATAGTCACTCTTGTCTTCCTCACTGTCATAAGGCCCTaGCAGATCCTTGTCTTCAGCTCTCTGCTGTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: IVTLVFLTVIRP*QILVFSSLLFP Trigger: GGGAAACAGCAGAGAGCTGAAGACAAGGATCTGTCAGGGCCTTATGACAGTGAGGAAGACAAGAGTGACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135211.8 ENSMUST00000146358.8 ENSMUST00000146916.8 |
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| CDS CCA 72 bp | TGTCCCCTGAGCCTGTCACGATGTACTTATTATTCCTaGAGATGTCGCAGCTCAGTACAGAAGATGATTCTT | + |
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Preference number: 6 (lower is better) Translates to: CPLSLSRCTYYS*RCRSSVQKMIL Trigger: AAGAATCATCTTCTGTACTGAGCTGCGACATCTCCAGGAATAATAAGTACATCGTGACAGGCTCAGGGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131411.2 ENSMUST00000135211.8 ENSMUST00000146358.8 |
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