Pregenerated sensors for TLDC2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074628

Ensembl transcript IDs: ENSMUST00000099140.3, ENSMUST00000166140.8

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CTGGCCCACTGTGACCCTCCATCTGTCGGTATAGTCTCCGCAGACTaGAGCCATCCCTTGATGTGCAGAAGACCAGACTCCAGGGGTGGC	+
Preference number: 5 (lower is better) Translates to: LAHCDPPSVGIVSAD*SHPLMCRRPDSRGG Trigger: GCCACCCCTGGAGTCTGGTCTTCTGCACATCAAGGGATGGCTTCAGTCTGCGGAGACTATACCGACAGATGGAGGGTCACAGTGGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099140.3 ENSMUST00000166140.8
CDS GCA 90 bp	CTCCAGGGGTGGCCAGTGACTCTTGGGGGCAGATGGAGGCTGAGCTaGTTAATCTCCGAGGCACCTAGGACTTGGCTAGCTTCTGTAAGC	+
Preference number: 5 (lower is better) Translates to: LQGWPVTLGGRWRLS*LISEAPRTWLASVS Trigger: GCTTACAGAAGCTAGCCAAGTCCTAGGTGCCTCGGAGATTAAGCAGCTCAGCCTCCATCTGCCCCCAAGAGTCACTGGCCACCCCTGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099140.3 ENSMUST00000166140.8
CDS CCA 90 bp	CAGAAGACCAGACTCCAGGGGTGGCCAGTGACTCTTGGGGGCAGATaGAGGCTGAGCTGCTTAATCTCCGAGGCACCTAGGACTTGGCTA	+
Preference number: 5 (lower is better) Translates to: QKTRLQGWPVTLGGR*RLSCLISEAPRTWL Trigger: TAGCCAAGTCCTAGGTGCCTCGGAGATTAAGCAGCTCAGCCTCCATCTGCCCCCAAGAGTCACTGGCCACCCCTGGAGTCTGGTCTTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099140.3 ENSMUST00000166140.8
CDS CCA 90 bp	AGACTGAAGCCATCCCTTGATGTGCAGAAGACCAGACTCCAGGGGTaGCCAGTGACTCTTGGGGGCAGATGGAGGCTGAGCTGCTTAATC	+
Preference number: 5 (lower is better) Translates to: RLKPSLDVQKTRLQG*PVTLGGRWRLSCLI Trigger: GATTAAGCAGCTCAGCCTCCATCTGCCCCCAAGAGTCACTGGCCACCCCTGGAGTCTGGTCTTCTGCACATCAAGGGATGGCTTCAGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099140.3 ENSMUST00000166140.8
CDS TCA 90 bp	GAATGTCTCTCCAGTACCGTAGAAGCCTTTGCTGAGTCGGATAGCTaGGGAGGAGAAGGCGCCAAACATCTGTCCATCCTGATCTCTCAG	+
Preference number: 5 (lower is better) Translates to: ECLSSTVEAFAESDS*GGEGAKHLSILISQ Trigger: CTGAGAGATCAGGATGGACAGATGTTTGGCGCCTTCTCCTCCTCAGCTATCCGACTCAGCAAAGGCTTCTACGGTACTGGAGAGACATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099140.3 ENSMUST00000166140.8
CDS TCA 72 bp	TGCAGAACTGCTCCCTGCGGGCCAGCACTTCATTGTTaGAGGTCGCACAGGGGTAGCTTCCGCCATGGTACA	+
Preference number: 6 (lower is better) Translates to: CRTAPCGPALHC*RSHRGSFRHGT Trigger: TGTACCATGGCGGAAGCTACCCCTGTGCGACCTTCAACAATGAAGTGCTGGCCCGCAGGGAGCAGTTCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099140.3 ENSMUST00000166140.8
CDS TCA 72 bp	TGTGACCCTCCATCTGTCGGTATAGTCTCCGCAGACTaGAGCCATCCCTTGATGTGCAGAAGACCAGACTCC	+
Preference number: 6 (lower is better) Translates to: CDPPSVGIVSAD*SHPLMCRRPDS Trigger: GGAGTCTGGTCTTCTGCACATCAAGGGATGGCTTCAGTCTGCGGAGACTATACCGACAGATGGAGGGTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099140.3 ENSMUST00000166140.8
CDS TCA 72 bp	TCCAGTACCGTAGAAGCCTTTGCTGAGTCGGATAGCTaGGGAGGAGAAGGCGCCAAACATCTGTCCATCCTG	+
Preference number: 6 (lower is better) Translates to: SSTVEAFAESDS*GGEGAKHLSIL Trigger: CAGGATGGACAGATGTTTGGCGCCTTCTCCTCCTCAGCTATCCGACTCAGCAAAGGCTTCTACGGTACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099140.3 ENSMUST00000166140.8

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