Pregenerated sensors for TLCD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048503Ensembl transcript IDs: ENSMUST00000061833.6, ENSMUST00000213544.2, ENSMUST00000216126.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTTTTGCTGGAAAGGAACACACCACCACCAGGGATTGGGTAGAGTaGTTTGCCTCGCAAGCGCAAGGCCCTGGGTTCGGTCCTCAGCTC | + |
|
Preference number: 1 (lower is better) Translates to: SFAGKEHTTTRDWVE*FASQAQGPGFGPQL Trigger: GAGCTGAGGACCGAACCCAGGGCCTTGCGCTTGCGAGGCAAAGCACTCTACCCAATCCCTGGTGGTGGTGTGTTCCTTTCCAGCAAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| 3UTR GCA 90 bp | TTCTGTGCACACAGAGTTAACACAGGAACCCTGAGCTGCTATCCTTaGAAAGGCCTGCTTGTAACGTTGGTGAGGGCTCCCACCAGAAAC | + |
|
Preference number: 1 (lower is better) Translates to: FCAHRVNTGTLSCYP*KGLLVTLVRAPTRN Trigger: GTTTCTGGTGGGAGCCCTCACCAACGTTACAAGCAGGCCTTTGCAAGGATAGCAGCTCAGGGTTCCTGTGTTAACTCTGTGTGCACAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR GCA 90 bp | CTCTACAGTTTCTGTGCACACAGAGTTAACACAGGAACCCTGAGCTaGTATCCTTGCAAAGGCCTGCTTGTAACGTTGGTGAGGGCTCCC | + |
|
Preference number: 1 (lower is better) Translates to: LYSFCAHRVNTGTLS*YPCKGLLVTLVRAP Trigger: GGGAGCCCTCACCAACGTTACAAGCAGGCCTTTGCAAGGATAGCAGCTCAGGGTTCCTGTGTTAACTCTGTGTGCACAGAAACTGTAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR GCA 90 bp | TTGCTGAAGTCAGCATTCCCCAGTTTCCAGTTCTGCCCACAGTTTTaGTGGAAAGGAACACACCACCACCAGGGATTGGGTAGAGTGCTT | + |
|
Preference number: 1 (lower is better) Translates to: LLKSAFPSFQFCPQF*WKGTHHHQGLGRVL Trigger: AAGCACTCTACCCAATCCCTGGTGGTGGTGTGTTCCTTTCCAGCAAAACTGTGGGCAGAACTGGAAACTGGGGAATGCTGACTTCAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| 3UTR CCA 90 bp | TGGCCTCTCATGCCTAGCAGATTAATTCACAAAAGCCCTGAGAACTaGCATACTCTTCCTGGTCGGGCAGAACCCGTACAACTGGACCAA | + |
|
Preference number: 1 (lower is better) Translates to: WPLMPSRLIHKSPEN*HTLPGRAEPVQLDQ Trigger: TTGGTCCAGTTGTACGGGTTCTGCCCGACCAGGAAGAGTATGCCAGTTCTCAGGGCTTTTGTGAATTAATCTGCTAGGCATGAGAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR CCA 90 bp | AAGTTCCTGCCATTGTTAGCTTCACTCCCTCCTCTCTGTCCCTCTTaGCATAACAGCTCCCATTCACAGATACTTGAATGCCTGACCCAT | + |
|
Preference number: 1 (lower is better) Translates to: KFLPLLASLPPLCPS*HNSSHSQILECLTH Trigger: ATGGGTCAGGCATTCAAGTATCTGTGAATGGGAGCTGTTATGCCAAGAGGGACAGAGAGGAGGGAGTGAAGCTAACAATGGCAGGAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR TCA 90 bp | ACAGTGGTCATCACTAAACAGCTCTGCCCACTTGTCAATCATCACTaGGGGTGTACAAGTGCCACTACAGGAGTAGGTGTTTCAAGACTG | + |
|
Preference number: 1 (lower is better) Translates to: TVVITKQLCPLVNHH*GCTSATTGVGVSRL Trigger: CAGTCTTGAAACACCTACTCCTGTAGTGGCACTTGTACACCCTCAGTGATGATTGACAAGTGGGCAGAGCTGTTTAGTGATGACCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR GCA 90 bp | GATTGCCTCACTGTTCCTAAACTGTTTCTGAAACACTATGGCTTATaGCAAATGACCGCTTTGGGGGATCTGGAATGTTGCCTCACGCTA | + |
|
Preference number: 1 (lower is better) Translates to: DCLTVPKLFLKHYGL*QMTALGDLECCLTL Trigger: TAGCGTGAGGCAACATTCCAGATCCCCCAAAGCGGTCATTTGGCATAAGCCATAGTGTTTCAGAAACAGTTTAGGAACAGTGAGGCAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR CCA 90 bp | CTTTCATCATTGCAGATGAAAGCCCTGAGTCTTCTTGATGAATCATaGAAGCCGAGGGTGTCCTTGGTAACCTCTGGCACAGTTAGTGAA | + |
|
Preference number: 1 (lower is better) Translates to: LSSLQMKALSLLDES*KPRVSLVTSGTVSE Trigger: TTCACTAACTGTGCCAGAGGTTACCAAGGACACCCTCGGCTTCCATGATTCATCAAGAAGACTCAGGGCTTTCATCTGCAATGATGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR TCA 90 bp | AAAATCTTTGGTTCTAGTTTGCAGTATGTACCAGGAGCTGAAACCTaGACTCCATCTCAAGTACAGTGGAATCCACATGGTAAATCCCCG | + |
|
Preference number: 1 (lower is better) Translates to: KIFGSSLQYVPGAET*TPSQVQWNPHGKSP Trigger: CGGGGATTTACCATGTGGATTCCACTGTACTTGAGATGGAGTTCAGGTTTCAGCTCCTGGTACATACTGCAAACTAGAACCAAAGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR TCA 90 bp | AAGGAAGGAAGGAAGGAAGGAAGGAGCCTGAGGCTATCACATACATaGAAATCTTTGGTTCTAGTTTGCAGTATGTACCAGGAGCTGAAA | + |
|
Preference number: 1 (lower is better) Translates to: KEGRKEGRSLRLSHT*KSLVLVCSMYQELK Trigger: TTTCAGCTCCTGGTACATACTGCAAACTAGAACCAAAGATTTTCATGTATGTGATAGCCTCAGGCTCCTTCCTTCCTTCCTTCCTTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR TCA 90 bp | GACCAAGTAAATCTAAATCTACCCACATCTCACTCATCTTGCATCTaGAGCACTAGCTCTACAGTTTCTGTGCACACAGAGTTAACACAG | + |
|
Preference number: 1 (lower is better) Translates to: DQVNLNLPTSHSSCI*STSSTVSVHTELTQ Trigger: CTGTGTTAACTCTGTGTGCACAGAAACTGTAGAGCTAGTGCTTCAGATGCAAGATGAGTGAGATGTGGGTAGATTTAGATTTACTTGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR CAA 90 bp | TCTGGCACAGTTAGTGAAGGGAGACGCAGTGAGAAGTTCCTGCCATaGTTAGCTTCACTCCCTCCTCTCTGTCCCTCTTGGCATAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: SGTVSEGRRSEKFLP*LASLPPLCPSWHNS Trigger: GCTGTTATGCCAAGAGGGACAGAGAGGAGGGAGTGAAGCTAACAATGGCAGGAACTTCTCACTGCGTCTCCCTTCACTAACTGTGCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTGAACTCCATCTCAAGTACAGTGGAATCCACATGGTAAATCCCCGTGGAATTAGATACTTGAATGCCTaGCCCATGCCCCTTCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: PELHLKYSGIHMVNPRGIRYLNA*PMPLPE Trigger: CTCAGGAAGGGGCATGGGTCAGGCATTCAAGTATCT...AATTCCACGGGGATTTACCATGTGGATTCCACTGTACTTGAGATGGAGTTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR TCA 90 bp | CATACTCTTCCTGGTCGGGCAGAACCCGTACAACTGGACCAAGTAAATCTAAATCCATTCACAGATACTTaGATGCCTGACCCATGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: HTLPGRAEPVQLDQVNLNPFTDT*MPDPCP Trigger: GGGGCATGGGTCAGGCATTCAAGTATCTGTGAATGG...ATTTAGATTTACTTGGTCCAGTTGTACGGGTTCTGCCCGACCAGGAAGAGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGTGCTTAGATCCCATGAGCTTGGACAAAGGTTCTTTTCCCTTTGCTGAGTCTCCATTCACAGATACTTaGATGCCTGACCCATGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: ECLDPMSLDKGSFPFAESPFTDT*MPDPCP Trigger: GGGGCATGGGTCAGGCATTCAAGTATCTGTGAATGG...AGACTCAGCAAAGGGAAAAGAACCTTTGTCCAAGCTCATGGGATCTAAGCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCAGCCTGAACTATACAAGCAAGACAGTGTCTCAGGAGAAGGGAAAAGGTGATCTGAGGGTGTACAAGTaGCACTACAGGAGTAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: ASLNYTSKTVSQEKGKGDLRVYK*HYRSRC Trigger: ACACCTACTCCTGTAGTGGCACTTGTACACCCTCAG...ATCACCTTTTCCCTTCTCCTGAGACACTGTCTTGCTTGTATAGTTCAGGCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR CCA 90 bp | CCATGGCCTCTCATGCCTAGCAGATTAATTCACAAAAGCCCTGAGAACTGGCATCCTCTCTGTCCCTCTTaGCATAACAGCTCCCATTCA | + |
|
Preference number: 2 (lower is better) Translates to: PWPLMPSRLIHKSPENWHPLCPS*HNSSHS Trigger: TGAATGGGAGCTGTTATGCCAAGAGGGACAGAGAGG...ATGCCAGTTCTCAGGGCTTTTGTGAATTAATCTGCTAGGCATGAGAGGCCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR GCA 90 bp | CATACTCTTCCTGGTCGGGCAGAACCCGTACAACTGGACCAAGTAAATCTAAATCTGAGCTGCTATCCTTaGAAAGGCCTGCTTGTAACG | + |
|
Preference number: 2 (lower is better) Translates to: HTLPGRAEPVQLDQVNLNLSCYP*KGLLVT Trigger: CGTTACAAGCAGGCCTTTGCAAGGATAGCAGCTCAG...ATTTAGATTTACTTGGTCCAGTTGTACGGGTTCTGCCCGACCAGGAAGAGTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR GCA 90 bp | CCATGGCCTCTCATGCCTAGCAGATTAATTCACAAAAGCCCTGAGAACTGGCATAAGCACATGACCTACTaGCATCAAAGTTTGGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: PWPLMPSRLIHKSPENWHKHMTY*HQSLGH Trigger: GTGTCCCAAACTTTGATGGCAGTAGGTCATGTGCTT...ATGCCAGTTCTCAGGGCTTTTGTGAATTAATCTGCTAGGCATGAGAGGCCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTAGACCATCAAGAAGAGCTGAAATGAGGAATTCCTCCCCACTTATCGCTCGTCCCAGTTTCCAGTTCTaGCCACAGTTTTGCTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VRPSRRAEMRNSSPLIARPSFQF*PQFCWK Trigger: TTTCCAGCAAAACTGTGGGCAGAACTGGAAACTGGG...ACGAGCGATAAGTGGGGAGGAATTCCTCATTTCAGCTCTTCTTGATGGTCTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| 3UTR-3UTR TCA 90 bp | AGGAATTCCTCCCCACTTATCGCTCGTTCAGGTGCCTTGTTATCAAAAATAAATAGATACTTGAATGCCTaGCCCATGCCCCTTCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: RNSSPLIARSGALLSKINRYLNA*PMPLPE Trigger: CTCAGGAAGGGGCATGGGTCAGGCATTCAAGTATCT...ATTTATTTTTGATAACAAGGCACCTGAACGAGCGATAAGTGGGGAGGAATTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| 3UTR-3UTR GCA 90 bp | GCCAGCCTGAACTATACAAGCAAGACAGTGTCTCAGGAGAAGGGAAAAGGTGATTCTTTGGTTCTAGTTTaGAGTATGTACCAGGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: ASLNYTSKTVSQEKGKGDSLVLV*SMYQEL Trigger: CAGCTCCTGGTACATACTGCAAACTAGAACCAAAGA...ATCACCTTTTCCCTTCTCCTGAGACACTGTCTTGCTTGTATAGTTCAGGCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGCCTGAACTATACAAGCAAGACAGTGTCTCAGGAGAAGGGAAAAGGTGATGTTTCTGAAACACTATaGCTTATGCCAAATGACCGC | + |
|
Preference number: 2 (lower is better) Translates to: ASLNYTSKTVSQEKGKGDVSETL*LMPNDR Trigger: GCGGTCATTTGGCATAAGCCATAGTGTTTCAGAAAC...ATCACCTTTTCCCTTCTCCTGAGACACTGTCTTGCTTGTATAGTTCAGGCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR CAA 90 bp | TTTTCTTTATGCCTATGTGCCAAGCCACTCTTATTGACTCTGCTTTaGCTGAAGTCAGCATTCCCCAGTTTCCAGTTCTGCCCACAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: FSLCLCAKPLLLTLL*LKSAFPSFQFCPQF Trigger: AAACTGTGGGCAGAACTGGAAACTGGGGAATGCTGACTTCAGCAAAAGCAGAGTCAATAAGAGTGGCTTGGCACATAGGCATAAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| 3UTR-3UTR TCA 90 bp | CCTGAACTCCATCTCAAGTACAGTGGAATCCACATGGTAAATCCCCGTGGAATTCTTTTCAGAGATGTCTaGATACCAAGGTCTCCAATG | + |
|
Preference number: 2 (lower is better) Translates to: PELHLKYSGIHMVNPRGILFRDV*IPRSPM Trigger: CATTGGAGACCTTGGTATTCAGACATCTCTGAAAAG...AATTCCACGGGGATTTACCATGTGGATTCCACTGTACTTGAGATGGAGTTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGTGCTTAGATCCCATGAGCTTGGACAAAGGTTCTTTTCCCTTTGCTGAGTCTCTTTTCAGAGATGTCTaGATACCAAGGTCTCCAATG | + |
|
Preference number: 2 (lower is better) Translates to: ECLDPMSLDKGSFPFAESLFRDV*IPRSPM Trigger: CATTGGAGACCTTGGTATTCAGACATCTCTGAAAAG...AGACTCAGCAAAGGGAAAAGAACCTTTGTCCAAGCTCATGGGATCTAAGCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGAATTCCTCCCCACTTATCGCTCGTTCAGGTGCCTTGTTATCAAAAATAAATATTAAAGCCCTACATTaGAGCCAGGCATGGTGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: RNSSPLIARSGALLSKINIKALH*SQAWWH Trigger: GTGCCACCATGCCTGGCTCCAATGTAGGGCTTTAAT...ATTTATTTTTGATAACAAGGCACCTGAACGAGCGATAAGTGGGGAGGAATTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| 3UTR-3UTR TCA 90 bp | GAGTGCTTAGATCCCATGAGCTTGGACAAAGGTTCTTTTCCCTTTGCTGAGTCTAGCCTGGAAAATGACTaGAGTCATAACCATACCTTT | + |
|
Preference number: 2 (lower is better) Translates to: ECLDPMSLDKGSFPFAESSLEND*SHNHTF Trigger: AAAGGTATGGTTATGACTTCAGTCATTTTCCAGGCT...AGACTCAGCAAAGGGAAAAGAACCTTTGTCCAAGCTCATGGGATCTAAGCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR TCA 90 bp | TCATCACTAAACAGCTCTGCCCACTTGTCAATCATCACTGAGGGTGTACAAGTGAGCCTGGAAAATGACTaGAGTCATAACCATACCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SSLNSSAHLSIITEGVQVSLEND*SHNHTF Trigger: AAAGGTATGGTTATGACTTCAGTCATTTTCCAGGCT...CACTTGTACACCCTCAGTGATGATTGACAAGTGGGCAGAGCTGTTTAGTGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTGAACTCCATCTCAAGTACAGTGGAATCCACATGGTAAATCCCCGTGGAATTGAAACAGCACTGATTTaGCTCAAGTTCTTTTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PELHLKYSGIHMVNPRGIETALI*LKFFSE Trigger: CTCTGAAAAGAACTTGAGTCAAATCAGTGCTGTTTC...AATTCCACGGGGATTTACCATGTGGATTCCACTGTACTTGAGATGGAGTTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR TCA 90 bp | CATACTCTTCCTGGTCGGGCAGAACCCGTACAACTGGACCAAGTAAATCTAAATTTCCTAAACTGTTTCTaGAACACTATGGCTTATGCC | + |
|
Preference number: 2 (lower is better) Translates to: HTLPGRAEPVQLDQVNLNFLNCF*NTMAYA Trigger: GGCATAAGCCATAGTGTTTCAGAAACAGTTTAGGAA...ATTTAGATTTACTTGGTCCAGTTGTACGGGTTCTGCCCGACCAGGAAGAGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR GCA 90 bp | CACCAAGTGTTTGATGACTTTCATGTGTGTTGTTGTGAATCACTCCTGTATATCCTGAGGGTGTACAAGTaGCACTACAGGAGTAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: HQVFDDFHVCCCESLLYILRVYK*HYRSRC Trigger: ACACCTACTCCTGTAGTGGCACTTGTACACCCTCAG...GATATACAGGAGTGATTCACAACAACACACATGAAAGTCATCAAACACTTGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR GCA 90 bp | TCATCACTAAACAGCTCTGCCCACTTGTCAATCATCACTGAGGGTGTACAAGTGTTTTTGAAACCTAAGTaGTCGCTTTCTAAGCCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: SSLNSSAHLSIITEGVQVFLKPK*SLSKPY Trigger: ATAGGGCTTAGAAAGCGAGCACTTAGGTTTCAAAAA...CACTTGTACACCCTCAGTGATGATTGACAAGTGGGCAGAGCTGTTTAGTGATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGTGCTTAGATCCCATGAGCTTGGACAAAGGTTCTTTTCCCTTTGCTGAGTCTTTTTTGAAACCTAAGTaGTCGCTTTCTAAGCCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: ECLDPMSLDKGSFPFAESFLKPK*SLSKPY Trigger: ATAGGGCTTAGAAAGCGAGCACTTAGGTTTCAAAAA...AGACTCAGCAAAGGGAAAAGAACCTTTGTCCAAGCTCATGGGATCTAAGCACTC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR GCA 72 bp | GGAAAGGAACACACCACCACCAGGGATTGGGTAGAGTaGTTTGCCTCGCAAGCGCAAGGCCCTGGGTTCGGT | + |
|
Preference number: 3 (lower is better) Translates to: GKEHTTTRDWVE*FASQAQGPGFG Trigger: ACCGAACCCAGGGCCTTGCGCTTGCGAGGCAAAGCACTCTACCCAATCCCTGGTGGTGGTGTGTTCCTTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| 3UTR GCA 72 bp | CACAGAGTTAACACAGGAACCCTGAGCTGCTATCCTTaGAAAGGCCTGCTTGTAACGTTGGTGAGGGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: HRVNTGTLSCYP*KGLLVTLVRAP Trigger: GGGAGCCCTCACCAACGTTACAAGCAGGCCTTTGCAAGGATAGCAGCTCAGGGTTCCTGTGTTAACTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR TCA 72 bp | GGCATAACAGCTCCCATTCACAGATACTTGAATGCCTaGCCCATGCCCCTTCCTGAGAGTCCCTCCCTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: GITAPIHRYLNA*PMPLPESPSLY Trigger: GTAAAGGGAGGGACTCTCAGGAAGGGGCATGGGTCAGGCATTCAAGTATCTGTGAATGGGAGCTGTTATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR GCA 72 bp | TCAGCATTCCCCAGTTTCCAGTTCTGCCCACAGTTTTaGTGGAAAGGAACACACCACCACCAGGGATTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SAFPSFQFCPQF*WKGTHHHQGLG Trigger: ACCCAATCCCTGGTGGTGGTGTGTTCCTTTCCAGCAAAACTGTGGGCAGAACTGGAAACTGGGGAATGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| 3UTR CCA 72 bp | GCATTCCCCAGTTTCCAGTTCTGCCCACAGTTTTGCTaGAAAGGAACACACCACCACCAGGGATTGGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: AFPSFQFCPQFC*KGTHHHQGLGR Trigger: TCTACCCAATCCCTGGTGGTGGTGTGTTCCTTTCCAGCAAAACTGTGGGCAGAACTGGAAACTGGGGAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| 3UTR GCA 72 bp | TTCTGTGCACACAGAGTTAACACAGGAACCCTGAGCTaGTATCCTTGCAAAGGCCTGCTTGTAACGTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FCAHRVNTGTLS*YPCKGLLVTLV Trigger: CACCAACGTTACAAGCAGGCCTTTGCAAGGATAGCAGCTCAGGGTTCCTGTGTTAACTCTGTGTGCACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR CCA 72 bp | TTGCAGATGAAAGCCCTGAGTCTTCTTGATGAATCATaGAAGCCGAGGGTGTCCTTGGTAACCTCTGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: LQMKALSLLDES*KPRVSLVTSGT Trigger: TGTGCCAGAGGTTACCAAGGACACCCTCGGCTTCCATGATTCATCAAGAAGACTCAGGGCTTTCATCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR CCA 72 bp | AAAGGAACCAGCATGAATTTGATTAAGCCTGCTCCCTaGTCTGGTCTGGAGCAGGTTACACGGGGCCAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: KGTSMNLIKPAP*SGLEQVTRGQN Trigger: ATTTTGGCCCCGTGTAACCTGCTCCAGACCAGACCAGGGAGCAGGCTTAATCAAATTCATGCTGGTTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGCCTGAACTATACAAGCAAGACAGTGTCTCAGGAGAAGGGAAAAGGTGATAACAGCTCTGCCCACTaGTCAATCATCACTGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ASLNYTSKTVSQEKGKGDNSSAH*SIITEG Trigger: ACCCTCAGTGATGATTGACAAGTGGGCAGAGCTGTT...ATCACCTTTTCCCTTCTCCTGAGACACTGTCTTGCTTGTATAGTTCAGGCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR TCA 72 bp | TCACAGATACTTGAATGCCTGACCCATGCCCCTTCCTaGGAGTCCCTCCCTTTACATGGGATGAACATACTT | + |
|
Preference number: 3 (lower is better) Translates to: SQILECLTHAPS*ESLPLHGMNIL Trigger: AAGTATGTTCATCCCATGTAAAGGGAGGGACTCTCAGGAAGGGGCATGGGTCAGGCATTCAAGTATCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR CCA 72 bp | CCATTGTTAGCTTCACTCCCTCCTCTCTGTCCCTCTTaGCATAACAGCTCCCATTCACAGATACTTGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: PLLASLPPLCPS*HNSSHSQILEC Trigger: GCATTCAAGTATCTGTGAATGGGAGCTGTTATGCCAAGAGGGACAGAGAGGAGGGAGTGAAGCTAACAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGCCTGAACTATACAAGCAAGACAGTGTCTCAGGAGAAGGGAAAAGGTGATAAGGTTCTTTTCCCTTaGCTGAGTCTTCTCCGTATC | + |
|
Preference number: 3 (lower is better) Translates to: ASLNYTSKTVSQEKGKGDKVLFP*LSLLRI Trigger: GATACGGAGAAGACTCAGCAAAGGGAAAAGAACCTT...ATCACCTTTTCCCTTCTCCTGAGACACTGTCTTGCTTGTATAGTTCAGGCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR TCA 72 bp | ATCACTAAACAGCTCTGCCCACTTGTCAATCATCACTaGGGGTGTACAAGTGCCACTACAGGAGTAGGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ITKQLCPLVNHH*GCTSATTGVGV Trigger: AACACCTACTCCTGTAGTGGCACTTGTACACCCTCAGTGATGATTGACAAGTGGGCAGAGCTGTTTAGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR TCA 72 bp | CACTGGGTTAGTGTCCCCAGTGACTATAGAATGGGCTaGCACTTCTCTCTGACCTTTAACCTTGCTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HWVSVPSDYRMG*HFSLTFNLASS Trigger: TGAAGAAGCAAGGTTAAAGGTCAGAGAGAAGTGTCAGCCCATTCTATAGTCACTGGGGACACTAACCCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| 3UTR-3UTR CAA 90 bp | CCATGGCCTCTCATGCCTAGCAGATTAATTCACAAAAGCCCTGAGAACTGGCATACCTTTAGCCCTTTTTaGAAACCTAAGTGCTCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PWPLMPSRLIHKSPENWHTFSPF*KPKCSL Trigger: AAGCGAGCACTTAGGTTTCAAAAAAGGGCTAAAGGT...ATGCCAGTTCTCAGGGCTTTTGTGAATTAATCTGCTAGGCATGAGAGGCCATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCCGTACAACTGGACCAAGTAAATCTAAATCTACCCACATCTCACTCATCTTGAACAGCTCTGCCCACTaGTCAATCATCACTGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TRTTGPSKSKSTHISLILNSSAH*SIITEG Trigger: ACCCTCAGTGATGATTGACAAGTGGGCAGAGCTGTT...CAAGATGAGTGAGATGTGGGTAGATTTAGATTTACTTGGTCCAGTTGTACGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCATTTGCTTGAGTTTGCCTCAAACAGAAAGATCTACAATCCTTTCCTTCTGCCTGAGCTGCTATCCTaGCAAAGGCCTGCTTGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: RHLLEFASNRKIYNPFLLPELLS*QRPACN Trigger: GTTACAAGCAGGCCTTTGCAAGGATAGCAGCTCAGG...CAGAAGGAAAGGATTGTAGATCTTTCTGTTTGAGGCAAACTCAAGCAAATGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| 3UTR TCA 72 bp | ATGCCCCTTCCTGAGAGTCCCTCCCTTTACATGGGATaGACATACTTAAAATGTCTCGTGGAAATCAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: MPLPESPSLYMG*TYLKCLVEIRS Trigger: ACTCCTGATTTCCACGAGACATTTTAAGTATGTTCATCCCATGTAAAGGGAGGGACTCTCAGGAAGGGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR TCA 72 bp | GGTTCTAGTTTGCAGTATGTACCAGGAGCTGAAACCTaGACTCCATCTCAAGTACAGTGGAATCCACATGGT | + |
|
Preference number: 3 (lower is better) Translates to: GSSLQYVPGAET*TPSQVQWNPHG Trigger: ACCATGTGGATTCCACTGTACTTGAGATGGAGTTCAGGTTTCAGCTCCTGGTACATACTGCAAACTAGAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTAGACCATCAAGAAGAGCTGAAATGAGGAATTCCTCCCCACTTATCGCTCGTACCTTTAGCCCTTTTTaGAAACCTAAGTGCTCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VRPSRRAEMRNSSPLIARTFSPF*KPKCSL Trigger: AAGCGAGCACTTAGGTTTCAAAAAAGGGCTAAAGGT...ACGAGCGATAAGTGGGGAGGAATTCCTCATTTCAGCTCTTCTTGATGGTCTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| 3UTR CCA 72 bp | CACAGGATTGTAATCCTAGCCCTGAGGAAGCTTAAGTaGAAAAATAGAGTTCAAGGCCAGCCTGAACTATAC | + |
|
Preference number: 3 (lower is better) Translates to: HRIVILALRKLK*KNRVQGQPELY Trigger: GTATAGTTCAGGCTGGCCTTGAACTCTATTTTTCCACTTAAGCTTCCTCAGGGCTAGGATTACAATCCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR-3UTR CAA 90 bp | CCATGGCCTCTCATGCCTAGCAGATTAATTCACAAAAGCCCTGAGAACTGGCATAGAAACAGCACTGATTaGACTCAAGTTCTTTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PWPLMPSRLIHKSPENWHRNSTD*TQVLFR Trigger: TCTGAAAAGAACTTGAGTCAAATCAGTGCTGTTTCT...ATGCCAGTTCTCAGGGCTTTTGTGAATTAATCTGCTAGGCATGAGAGGCCATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR TCA 72 bp | AGCACTGATTTGACTCAAGTTCTTTTCAGAGATGTCTaGATACCAAGGTCTCCAATGAACATGGGGACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: STDLTQVLFRDV*IPRSPMNMGTQ Trigger: TTGGGTCCCCATGTTCATTGGAGACCTTGGTATTCAGACATCTCTGAAAAGAACTTGAGTCAAATCAGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR TCA 72 bp | AATCTAAATCTACCCACATCTCACTCATCTTGCATCTaGAGCACTAGCTCTACAGTTTCTGTGCACACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NLNLPTSHSSCI*STSSTVSVHTE Trigger: CTCTGTGTGCACAGAAACTGTAGAGCTAGTGCTTCAGATGCAAGATGAGTGAGATGTGGGTAGATTTAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR TCA 72 bp | CATTTGCAAGAATGTCTACGTTTTCAACCTCCCTTGTaGCTGGTTTTTGTAGGTAATGCTGCTCACTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: HLQECLRFQPPL*LVFVGNAAHWV Trigger: AACCCAGTGAGCAGCATTACCTACAAAAACCAGTCACAAGGGAGGTTGAAAACGTAGACATTCTTGCAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| 3UTR-3UTR CAA 90 bp | CACCAAGTGTTTGATGACTTTCATGTGTGTTGTTGTGAATCACTCCTGTATATCAAGGTTCTTTTCCCTTaGCTGAGTCTTCTCCGTATC | + |
|
Preference number: 3 (lower is better) Translates to: HQVFDDFHVCCCESLLYIKVLFP*LSLLRI Trigger: GATACGGAGAAGACTCAGCAAAGGGAAAAGAACCTT...GATATACAGGAGTGATTCACAACAACACACATGAAAGTCATCAAACACTTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR GCA 72 bp | CTCTTTAGCTACTTACTGTTAAAGAACCTTTCCATTTaGAAGAATGTCTACGTTTTCAACCTCCCTTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LFSYLLLKNLSI*KNVYVFNLPCD Trigger: GTCACAAGGGAGGTTGAAAACGTAGACATTCTTGCAAATGGAAAGGTTCTTTAACAGTAAGTAGCTAAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| CDS-3UTR GCA 90 bp | TTCCTGCCATTGTTAGCTTCACTCCCTCCTCTCTGTCCCTCTTGGCATAACAGCGCCAGCCACCCAGGCTaGACAGCACCTGCACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLPLLASLPPLCPSWHNSASHPG*TAPAHR Trigger: TCTGTGTGCAGGTGCTGTGCAGCCTGGGTGGCTGGC...GCTGTTATGCCAAGAGGGACAGAGAGGAGGGAGTGAAGCTAACAATGGCAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTGCCATTGTTAGCTTCACTCCCTCCTCTCTGTCCCTCTTGGCATAACAGCGAGAGGTGTGTTCGGTaGGCCTGGGTGGGTAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLPLLASLPPLCPSWHNSERCVR*AWVGKR Trigger: CCTTTTACCCACCCAGGCTCACCGAACACACCTCTC...GCTGTTATGCCAAGAGGGACAGAGAGGAGGGAGTGAAGCTAACAATGGCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCCATTGTTAGCTTCACTCCCTCCTCTCTGTCCCTCTTGGCATAACAGCTTCGGTGAGCCTGGGTaGGTAAAAGGCCAAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLPLLASLPPLCPSWHNSFGEPG*VKGQGP Trigger: TGGCCCTTGGCCTTTTACCCACCCAGGCTCACCGAA...GCTGTTATGCCAAGAGGGACAGAGAGGAGGGAGTGAAGCTAACAATGGCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR CAA 72 bp | GTCAGCATTCCCCAGTTTCCAGTTCTGCCCACAGTTTaGCTGGAAAGGAACACACCACCACCAGGGATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSIPQFPVLPTV*LERNTPPPGIG Trigger: CCCAATCCCTGGTGGTGGTGTGTTCCTTTCCAGCAAAACTGTGGGCAGAACTGGAAACTGGGGAATGCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| CDS-3UTR GCA 90 bp | CCTGAACTCCATCTCAAGTACAGTGGAATCCACATGGTAAATCCCCGTGGAATTGCCAGCCACCCAGGCTaGACAGCACCTGCACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PELHLKYSGIHMVNPRGIASHPG*TAPAHR Trigger: TCTGTGTGCAGGTGCTGTGCAGCCTGGGTGGCTGGC...AATTCCACGGGGATTTACCATGTGGATTCCACTGTACTTGAGATGGAGTTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR CAA 72 bp | GTTAGTGAAGGGAGACGCAGTGAGAAGTTCCTGCCATaGTTAGCTTCACTCCCTCCTCTCTGTCCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSEGRRSEKFLP*LASLPPLCPSW Trigger: CCAAGAGGGACAGAGAGGAGGGAGTGAAGCTAACAATGGCAGGAACTTCTCACTGCGTCTCCCTTCACTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR CCA 90 bp | CCATGGCCTCTCATGCCTAGCAGATTAATTCACAAAAGCCCTGAGAACTGGCATATGGAGAGGACTCCGTaGGTGAAGGTCACCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PWPLMPSRLIHKSPENWHMERTP*VKVTSR Trigger: TCGGCTGGTGACCTTCACCCACGGAGTCCTCTCCAT...ATGCCAGTTCTCAGGGCTTTTGTGAATTAATCTGCTAGGCATGAGAGGCCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAACTCCATCTCAAGTACAGTGGAATCCACATGGTAAATCCCCGTGGAATTTTCGGTGAGCCTGGGTaGGTAAAAGGCCAAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PELHLKYSGIHMVNPRGIFGEPG*VKGQGP Trigger: TGGCCCTTGGCCTTTTACCCACCCAGGCTCACCGAA...AATTCCACGGGGATTTACCATGTGGATTCCACTGTACTTGAGATGGAGTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR TCA 90 bp | CCATGGCCTCTCATGCCTAGCAGATTAATTCACAAAAGCCCTGAGAACTGGCATGGAGCAGCGGGTTGGTaGTCTCACTTCCAAAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PWPLMPSRLIHKSPENWHGAAGW*SHFQRV Trigger: TACTCTTTGGAAGTGAGATCACCAACCCGCTGCTCC...ATGCCAGTTCTCAGGGCTTTTGTGAATTAATCTGCTAGGCATGAGAGGCCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR TCA 90 bp | CCATGGCCTCTCATGCCTAGCAGATTAATTCACAAAAGCCCTGAGAACTGGCATTCACAGAAAAGGAGATaGGCGCCCACACCAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PWPLMPSRLIHKSPENWHSQKRR*APTPIL Trigger: GAGGATTGGTGTGGGCGCTCATCTCCTTTTCTGTGA...ATGCCAGTTCTCAGGGCTTTTGTGAATTAATCTGCTAGGCATGAGAGGCCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGCCTGAACTATACAAGCAAGACAGTGTCTCAGGAGAAGGGAAAAGGTGATCCACTTGGGGGTGGGTaGGACCATTTCACAGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASLNYTSKTVSQEKGKGDPLGGG*DHFTEK Trigger: CTTTTCTGTGAAATGGTCTCACCCACCCCCAAGTGG...ATCACCTTTTCCCTTCTCCTGAGACACTGTCTTGCTTGTATAGTTCAGGCTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR TCA 90 bp | CAATCATCACTGAGGGTGTACAAGTGCCACTACAGGAGTAGGTGTTTCAAGACTGAAAGATGTATAGAGTaGGAGCCAGCCACCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSSLRVYKCHYRSRCFKTERCIE*EPATQA Trigger: AGCCTGGGTGGCTGGCTCTCACTCTATACATCTTTC...AGTCTTGAAACACCTACTCCTGTAGTGGCACTTGTACACCCTCAGTGATGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR TCA 90 bp | TCATCACTAAACAGCTCTGCCCACTTGTCAATCATCACTGAGGGTGTACAAGTGCCACTTGGGGGTGGGTaGGACCATTTCACAGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSLNSSAHLSIITEGVQVPLGGG*DHFTEK Trigger: CTTTTCTGTGAAATGGTCTCACCCACCCCCAAGTGG...CACTTGTACACCCTCAGTGATGATTGACAAGTGGGCAGAGCTGTTTAGTGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR CCA 90 bp | CCATGGCCTCTCATGCCTAGCAGATTAATTCACAAAAGCCCTGAGAACTGGCATCAAACCACTTGGGGGTaGGTGAGACCATTTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PWPLMPSRLIHKSPENWHQTTWG*VRPFHR Trigger: TCTGTGAAATGGTCTCACCCACCCCCAAGTGGTTTG...ATGCCAGTTCTCAGGGCTTTTGTGAATTAATCTGCTAGGCATGAGAGGCCATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR CAA 72 bp | TGCCTATGTGCCAAGCCACTCTTATTGACTCTGCTTTaGCTGAAGTCAGCATTCCCCAGTTTCCAGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLCAKPLLLTLL*LKSAFPSFQFC Trigger: GCAGAACTGGAAACTGGGGAATGCTGACTTCAGCAAAAGCAGAGTCAATAAGAGTGGCTTGGCACATAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| CDS-3UTR TCA 90 bp | TCATCACTAAACAGCTCTGCCCACTTGTCAATCATCACTGAGGGTGTACAAGTGGCCAAGGGCCATCGATaGAGCCAATATAAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SSLNSSAHLSIITEGVQVAKGHR*SQYKQT Trigger: TGTCTGCTTATATTGGCTTCATCGATGGCCCTTGGC...CACTTGTACACCCTCAGTGATGATTGACAAGTGGGCAGAGCTGTTTAGTGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAACTCCATCTCAAGTACAGTGGAATCCACATGGTAAATCCCCGTGGAATTGCCAAGGGCCATCGATaGAGCCAATATAAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PELHLKYSGIHMVNPRGIAKGHR*SQYKQT Trigger: TGTCTGCTTATATTGGCTTCATCGATGGCCCTTGGC...AATTCCACGGGGATTTACCATGTGGATTCCACTGTACTTGAGATGGAGTTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR TCA 90 bp | GAGTGCTTAGATCCCATGAGCTTGGACAAAGGTTCTTTTCCCTTTGCTGAGTCTCAATCCTCACACCAGTaGACAGAGCCACAAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ECLDPMSLDKGSFPFAESQSSHQ*TEPQRG Trigger: TCCTCTTTGTGGCTCTGTTCACTGGTGTGAGGATTG...AGACTCAGCAAAGGGAAAAGAACCTTTGTCCAAGCTCATGGGATCTAAGCACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAACTCCATCTCAAGTACAGTGGAATCCACATGGTAAATCCCCGTGGAATTCAATCCTCACACCAGTaGACAGAGCCACAAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PELHLKYSGIHMVNPRGIQSSHQ*TEPQRG Trigger: TCCTCTTTGTGGCTCTGTTCACTGGTGTGAGGATTG...AATTCCACGGGGATTTACCATGTGGATTCCACTGTACTTGAGATGGAGTTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR CCA 90 bp | CATACTCTTCCTGGTCGGGCAGAACCCGTACAACTGGACCAAGTAAATCTAAATCCTTCACAAACCACTTaGGGGTGGGTGAGACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: HTLPGRAEPVQLDQVNLNPSQTT*GWVRPF Trigger: AAATGGTCTCACCCACCCCCAAGTGGTTTGTGAAGG...ATTTAGATTTACTTGGTCCAGTTGTACGGGTTCTGCCCGACCAGGAAGAGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR TCA 90 bp | ACCCGTACAACTGGACCAAGTAAATCTAAATCTACCCACATCTCACTCATCTTGGAAAGATGTATAGAGTaGGAGCCAGCCACCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRTTGPSKSKSTHISLILERCIE*EPATQA Trigger: AGCCTGGGTGGCTGGCTCTCACTCTATACATCTTTC...CAAGATGAGTGAGATGTGGGTAGATTTAGATTTACTTGGTCCAGTTGTACGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR GCA 90 bp | CCATGGCCTCTCATGCCTAGCAGATTAATTCACAAAAGCCCTGAGAACTGGCATGATGCTTTTCTTCCATaGAAAGCGCCAGATGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PWPLMPSRLIHKSPENWHDAFLP*KAPDAN Trigger: GTTAGCATCTGGCGCTTTGCATGGAAGAAAAGCATC...ATGCCAGTTCTCAGGGCTTTTGTGAATTAATCTGCTAGGCATGAGAGGCCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR CCA 90 bp | CACCAAGTGTTTGATGACTTTCATGTGTGTTGTTGTGAATCACTCCTGTATATCATGGAGAGGACTCCGTaGGTGAAGGTCACCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HQVFDDFHVCCCESLLYIMERTP*VKVTSR Trigger: TCGGCTGGTGACCTTCACCCACGGAGTCCTCTCCAT...GATATACAGGAGTGATTCACAACAACACACATGAAAGTCATCAAACACTTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR TCA 90 bp | AGGCATTTGCTTGAGTTTGCCTCAAACAGAAAGATCTACAATCCTTTCCTTCTGGGAGCAGCGGGTTGGTaGTCTCACTTCCAAAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RHLLEFASNRKIYNPFLLGAAGW*SHFQRV Trigger: TACTCTTTGGAAGTGAGATCACCAACCCGCTGCTCC...CAGAAGGAAAGGATTGTAGATCTTTCTGTTTGAGGCAAACTCAAGCAAATGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| CDS-3UTR TCA 90 bp | AGGCATTTGCTTGAGTTTGCCTCAAACAGAAAGATCTACAATCCTTTCCTTCTGTCACAGAAAAGGAGATaGGCGCCCACACCAATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RHLLEFASNRKIYNPFLLSQKRR*APTPIL Trigger: GAGGATTGGTGTGGGCGCTCATCTCCTTTTCTGTGA...CAGAAGGAAAGGATTGTAGATCTTTCTGTTTGAGGCAAACTCAAGCAAATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| CDS-3UTR CCA 90 bp | ACCCGTACAACTGGACCAAGTAAATCTAAATCTACCCACATCTCACTCATCTTGCCTTCACAAACCACTTaGGGGTGGGTGAGACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TRTTGPSKSKSTHISLILPSQTT*GWVRPF Trigger: AAATGGTCTCACCCACCCCCAAGTGGTTTGTGAAGG...CAAGATGAGTGAGATGTGGGTAGATTTAGATTTACTTGGTCCAGTTGTACGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR CAA 72 bp | CAAGAGACTAGAAGCGAGTGCTTAGATCCCATGAGCTaGGACAAAGGTTCTTTTCCCTTTGCTGAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QETRSECLDPMS*DKGSFPFAESS Trigger: AGAAGACTCAGCAAAGGGAAAAGAACCTTTGTCCAAGCTCATGGGATCTAAGCACTCGCTTCTAGTCTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR GCA 90 bp | AGGCATTTGCTTGAGTTTGCCTCAAACAGAAAGATCTACAATCCTTTCCTTCTGGCTCTTCATTCCGTCTaGTTCTCCACGCATGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RHLLEFASNRKIYNPFLLALHSV*FSTHGT Trigger: AGTACCATGCGTGGAGAAGCAGACGGAATGAAGAGC...CAGAAGGAAAGGATTGTAGATCTTTCTGTTTGAGGCAAACTCAAGCAAATGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| CDS-3UTR CCA 90 bp | ACCCGTACAACTGGACCAAGTAAATCTAAATCTACCCACATCTCACTCATCTTGCTGCTTCTCCACGCATaGTACTTCTTGATGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRTTGPSKSKSTHISLILLLLHA*YFLMLF Trigger: GAAAAGCATCAAGAAGTACCATGCGTGGAGAAGCAG...CAAGATGAGTGAGATGTGGGTAGATTTAGATTTACTTGGTCCAGTTGTACGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| 3UTR CAA 72 bp | TTCCCTTTGCTGAGTCTTCTCCGTATCCTTTCATCATaGCAGATGAAAGCCCTGAGTCTTCTTGATGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: FPLLSLLRILSS*QMKALSLLDES Trigger: TGATTCATCAAGAAGACTCAGGGCTTTCATCTGCAATGATGAAAGGATACGGAGAAGACTCAGCAAAGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR CCA 90 bp | AGGAATTCCTCCCCACTTATCGCTCGTTCAGGTGCCTTGTTATCAAAAATAAATCTGCTTCTCCACGCATaGTACTTCTTGATGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RNSSPLIARSGALLSKINLLLHA*YFLMLF Trigger: GAAAAGCATCAAGAAGTACCATGCGTGGAGAAGCAG...ATTTATTTTTGATAACAAGGCACCTGAACGAGCGATAAGTGGGGAGGAATTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| CDS-3UTR GCA 90 bp | CACCAAGTGTTTGATGACTTTCATGTGTGTTGTTGTGAATCACTCCTGTATATCGATGCTTTTCTTCCATaGAAAGCGCCAGATGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HQVFDDFHVCCCESLLYIDAFLP*KAPDAN Trigger: GTTAGCATCTGGCGCTTTGCATGGAAGAAAAGCATC...GATATACAGGAGTGATTCACAACAACACACATGAAAGTCATCAAACACTTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS TCA 90 bp | CTTGGAGAGGTGTGTTCGGTGAGCCTATGGAGAGGACTCCGTGGGTaGAGGTCACCAGCCGACAGCTCCACTCACAGCTTCGGTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LGEVCSVSLWRGLRG*RSPADSSTHSFGAC Trigger: ACAAGCACCGAAGCTGTGAGTGGAGCTGTCGGCTGGTGACCTTCACCCACGGAGTCCTCTCCATAGGCTCACCGAACACACCTCTCCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216126.2 |
||
| CDS TCA 90 bp | ACAAACCACTTGGGGGTGGGTGAGACCATTTCACAGAAAAGGAGATaGGCGCCCACACCAATCCTCACACCAGTGAACAGAGCCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TNHLGVGETISQKRR*APTPILTPVNRATK Trigger: CTTTGTGGCTCTGTTCACTGGTGTGAGGATTGGTGTGGGCGCTCATCTCCTTTTCTGTGAAATGGTCTCACCCACCCCCAAGTGGTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 ENSMUST00000216126.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTGCCATTGTTAGCTTCACTCCCTCCTCTCTGTCCCTCTTGGCATAACAGCTCACAGCTTCGGTGCTaGTTCAGGCAGCAGAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLPLLASLPPLCPSWHNSSQLRC*FRQQKD Trigger: ATCTTTCTGCTGCCTGAACAAGCACCGAAGCTGTGA...GCTGTTATGCCAAGAGGGACAGAGAGGAGGGAGTGAAGCTAACAATGGCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR CAA 90 bp | CATACTCTTCCTGGTCGGGCAGAACCCGTACAACTGGACCAAGTAAATCTAAATCCAAAGAGTACAGCATaGACCTCTGTGCCCGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: HTLPGRAEPVQLDQVNLNPKSTA*TSVPDS Trigger: GGAGTCGGGCACAGAGGTCAATGCTGTACTCTTTGG...ATTTAGATTTACTTGGTCCAGTTGTACGGGTTCTGCCCGACCAGGAAGAGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS CCA 90 bp | TTGTGTCTTAGCTGCCGCTCTTCATTCCGTCTGCTTCTCCACGCATaGTACTTCTTGATGCTTTTCTTCCATGCAAAGCGCCAGATGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LCLSCRSSFRLLLHA*YFLMLFFHAKRQML Trigger: TAGCATCTGGCGCTTTGCATGGAAGAAAAGCATCAAGAAGTACCATGCGTGGAGAAGCAGACGGAATGAAGAGCGGCAGCTAAGACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS-3UTR CAA 90 bp | AGGCATTTGCTTGAGTTTGCCTCAAACAGAAAGATCTACAATCCTTTCCTTCTGCCAAAGAGTACAGCATaGACCTCTGTGCCCGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RHLLEFASNRKIYNPFLLPKSTA*TSVPDS Trigger: GGAGTCGGGCACAGAGGTCAATGCTGTACTCTTTGG...CAGAAGGAAAGGATTGTAGATCTTTCTGTTTGAGGCAAACTCAAGCAAATGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061833.6 |
||
| CDS-3UTR CAA 90 bp | ACCCGTACAACTGGACCAAGTAAATCTAAATCTACCCACATCTCACTCATCTTGTCACAGCTTCGGTGCTaGTTCAGGCAGCAGAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TRTTGPSKSKSTHISLILSQLRC*FRQQKD Trigger: ATCTTTCTGCTGCCTGAACAAGCACCGAAGCTGTGA...CAAGATGAGTGAGATGTGGGTAGATTTAGATTTACTTGGTCCAGTTGTACGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS TCA 72 bp | GTGTGTTCGGTGAGCCTATGGAGAGGACTCCGTGGGTaGAGGTCACCAGCCGACAGCTCCACTCACAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VCSVSLWRGLRG*RSPADSSTHSF Trigger: GAAGCTGTGAGTGGAGCTGTCGGCTGGTGACCTTCACCCACGGAGTCCTCTCCATAGGCTCACCGAACACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216126.2 |
||
| CDS CCA 72 bp | AGAGGTGTGTTCGGTGAGCCTATGGAGAGGACTCCGTaGGTGAAGGTCACCAGCCGACAGCTCCACTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: RGVFGEPMERTP*VKVTSRQLHSQ Trigger: CTGTGAGTGGAGCTGTCGGCTGGTGACCTTCACCCACGGAGTCCTCTCCATAGGCTCACCGAACACACCTCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216126.2 |
||
| CDS TCA 72 bp | TCGGTGCTTGTTCAGGCAGCAGAAAGATGTATAGAGTaGGAGCCAGCCACCCAGGCTGCACAGCACCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SVLVQAAERCIE*EPATQAAQHLH Trigger: GTGCAGGTGCTGTGCAGCCTGGGTGGCTGGCTCTCACTCTATACATCTTTCTGCTGCCTGAACAAGCACCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 ENSMUST00000216126.2 |
||
| CDS TCA 72 bp | TATAAGCAGACAGACCTATGGAGAGGACTCCGTGGGTaGAGGTCACCAGCCGACAGCTCCACTCACAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: YKQTDLWRGLRG*RSPADSSTHSF Trigger: GAAGCTGTGAGTGGAGCTGTCGGCTGGTGACCTTCACCCACGGAGTCCTCTCCATAGGTCTGTCTGCTTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||
| CDS TCA 72 bp | AAAGGAGATGAGCGCCCACACCAATCCTCACACCAGTaGACAGAGCCACAAAGAGGAAGTCCACCACATCCC | + |
|
Preference number: 6 (lower is better) Translates to: KGDERPHQSSHQ*TEPQRGSPPHP Trigger: GGGATGTGGTGGACTTCCTCTTTGTGGCTCTGTTCACTGGTGTGAGGATTGGTGTGGGCGCTCATCTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 ENSMUST00000216126.2 |
||
| CDS CCA 72 bp | AGCTGCCGCTCTTCATTCCGTCTGCTTCTCCACGCATaGTACTTCTTGATGCTTTTCTTCCATGCAAAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SCRSSFRLLLHA*YFLMLFFHAKR Trigger: GCGCTTTGCATGGAAGAAAAGCATCAAGAAGTACCATGCGTGGAGAAGCAGACGGAATGAAGAGCGGCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061833.6 ENSMUST00000213544.2 |
||