Pregenerated sensors for TLCD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028132Ensembl transcript IDs: ENSMUST00000029777.14, ENSMUST00000128909.8, ENSMUST00000135818.8, ENSMUST00000155309.8
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGCATCAGGCTTAGCTTTCGGTAGCTTTGGCATGAGCCAGGTGTaGTTAAGGCTGGGAGGTGTGTGTGCACATTCAGAGACTCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: SASGLAFGSFGMSQV*LRLGGVCAHSETLH Trigger: ATGAAGAGTCTCTGAATGTGCACACACACCTCCCAGCCTTAACCACACCTGGCTCATGCCAAAGCTACCGAAAGCTAAGCCTGATGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR TCA 90 bp | TCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCAAGAAGAAATATaGTCTTTATGGGGAAAGTACCCGGAAGCAGGCGAAGGCAGCGTG | + |
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Preference number: 1 (lower is better) Translates to: SGVRFGTWKTLQEEI*SLWGKYPEAGEGSV Trigger: CACGCTGCCTTCGCCTGCTTCCGGGTACTTTCCCCATAAAGATCATATTTCTTCTTGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| 3UTR TCA 90 bp | ACTTGCCACAAGAAATTAAGACGCATCCAGATGAGTGGTGGTGTCTaGGAAAGAGACATTAGAAAGGCCCTGGCATATGGAAAGGGGATA | + |
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Preference number: 1 (lower is better) Translates to: TCHKKLRRIQMSGGV*ERDIRKALAYGKGI Trigger: TATCCCCTTTCCATATGCCAGGGCCTTTCTAATGTCTCTTTCTCAGACACCACCACTCATCTGGATGCGTCTTAATTTCTTGTGGCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR GCA 90 bp | CCTCCAGGAGTTAGGCAGAAACCTCACAAAGAACTTGTCTCTAAATaGCCAAGGCTTCAGAGGAAGCAATTTACACATCTGACACTTGAA | + |
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Preference number: 1 (lower is better) Translates to: PPGVRQKPHKELVSK*PRLQRKQFTHLTLE Trigger: TTCAAGTGTCAGATGTGTAAATTGCTTCCTCTGAAGCCTTGGGCATTTAGAGACAAGTTCTTTGTGAGGTTTCTGCCTAACTCCTGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR TCA 90 bp | CATTTGCATCCCTATACCTTCACTTTTACACAACCAGTGCACACCTaGGTTGCCTATGATGGAGACAGCACTAAACTTAGCAAGCCATTA | + |
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Preference number: 1 (lower is better) Translates to: HLHPYTFTFTQPVHT*VAYDGDSTKLSKPL Trigger: TAATGGCTTGCTAAGTTTAGTGCTGTCTCCATCATAGGCAACTCAGGTGTGCACTGGTTGTGTAAAAGTGAAGGTATAGGGATGCAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR GCA 90 bp | GACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTaGAAGAAGAAATATGATCTTTATGGGGAAAGTACCCGGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: DKTGVLVSGLELGKL*KKKYDLYGESTRKQ Trigger: CTGCTTCCGGGTACTTTCCCCATAAAGATCATATTTCTTCTTGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| 3UTR GCA 90 bp | GACTCTTCATACAGGAAGATTCTCACTAGTGTGCTGGCTCACACCTaGGGAAAAACACTCTGCCAATCTAACAGAATACAATGTTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: DSSYRKILTSVLAHT*GKTLCQSNRIQCFL Trigger: AAGGAAACATTGTATTCTGTTAGATTGGCAGAGTGTTTTTCCGCAGGTGTGAGCCAGCACACTAGTGAGAATCTTCCTGTATGAAGAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR CCA 90 bp | AGGTATAGAGCTTATGAATCTGAGATGGAGAAGCAGCTTTGTGTTTaGTCCTGTGTAGGACCTGATATCAAAACTGCTCTTCAGAGTGGA | + |
|
Preference number: 1 (lower is better) Translates to: RYRAYESEMEKQLCV*SCVGPDIKTALQSG Trigger: TCCACTCTGAAGAGCAGTTTTGATATCAGGTCCTACACAGGACCAAACACAAAGCTGCTTCTCCATCTCAGATTCATAAGCTCTATACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR TCA 90 bp | TGTGTAGGACCTGATATCAAAACTGCTCTTCAGAGTGGATACATTTaGATGTTTCAATGCAAACAAACCCATCTTTCGAAGCTGACCACT | + |
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Preference number: 1 (lower is better) Translates to: CVGPDIKTALQSGYI*MFQCKQTHLSKLTT Trigger: AGTGGTCAGCTTCGAAAGATGGGTTTGTTTGCATTGAAACATTCAAATGTATCCACTCTGAAGAGCAGTTTTGATATCAGGTCCTACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR GCA 90 bp | TATAAAATCATTTGCATCCCTATACCTTCACTTTTACACAACCAGTaGACACCTGAGTTGCCTATGATGGAGACAGCACTAAACTTAGCA | + |
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Preference number: 1 (lower is better) Translates to: YKIICIPIPSLLHNQ*TPELPMMETALNLA Trigger: TGCTAAGTTTAGTGCTGTCTCCATCATAGGCAACTCAGGTGTGCACTGGTTGTGTAAAAGTGAAGGTATAGGGATGCAAATGATTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR GCA 90 bp | AGCATGAAGCAATTATCGCCTTCACAGAGACTCATAACCATACACTaGCATCATTTTAATGGCGAGTTTAAAATCTGCGTTCAGAACTGT | + |
|
Preference number: 1 (lower is better) Translates to: SMKQLSPSQRLITIH*HHFNGEFKICVQNC Trigger: ACAGTTCTGAACGCAGATTTTAAACTCGCCATTAAAATGATGGCAGTGTATGGTTATGAGTCTCTGTGAAGGCGATAATTGCTTCATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR TCA 90 bp | GTGTCATTCTTAATACTTAAAGGAAACTGTCATGACAAAGGATGCTaGCCAGGTCCAACATGCAGGTTATTGCTTAGAACTTGCATAAAC | + |
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Preference number: 1 (lower is better) Translates to: VSFLILKGNCHDKGC*PGPTCRLLLRTCIN Trigger: GTTTATGCAAGTTCTAAGCAATAACCTGCATGTTGGACCTGGTCAGCATCCTTTGTCATGACAGTTTCCTTTAAGTATTAAGAATGACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR TCA 90 bp | AAACTCCCAAGGTGTTCACTGGGAGAGGGGAGAGTTATACAATATTaGTCTGTGTCATTCTTAATACTTAAAGGAAACTGTCATGACAAA | + |
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Preference number: 1 (lower is better) Translates to: KLPRCSLGEGRVIQY*SVSFLILKGNCHDK Trigger: TTTGTCATGACAGTTTCCTTTAAGTATTAAGAATGACACAGATCAATATTGTATAACTCTCCCCTCTCCCAGTGAACACCTTGGGAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR GCA 90 bp | CTCATAACCATACACTGCCATCATTTTAATGGCGAGTTTAAAATCTaGGTTCAGAACTGTAGTACTAGCCAAAGAGACAAACATATTTAC | + |
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Preference number: 1 (lower is better) Translates to: LITIHCHHFNGEFKI*VQNCSTSQRDKHIY Trigger: GTAAATATGTTTGTCTCTTTGGCTAGTACTACAGTTCTGAACGCAGATTTTAAACTCGCCATTAAAATGATGGCAGTGTATGGTTATGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGCATACCCCCATGAAACCATGTCAGTTCTGATGGCCTGGGGAAGGGACGTGCGGGACAAAGAGGAATaGAGATGGCTTATGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: TAYPHETMSVLMAWGRDVRDKEE*RWLMEA Trigger: TGCTTCCATAAGCCATCTTCATTCCTCTTTGTCCCG...CACGTCCCTTCCCCAGGCCATCAGAACTGACATGGTTTCATGGGGGTATGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGACTGCTAAAGTTCTTAAAGCAAGGCAATGAATACACACAGACCAATCGTGCCCCAGGGGAGGGCTaGCTTGCAGTGGCAGTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: HRLLKFLKQGNEYTQTNRAPGEG*LAVAVC Trigger: GCAAACTGCCACTGCAAGCCAGCCCTCCCCTGGGGC...ACGATTGGTCTGTGTGTATTCATTGCCTTGCTTTAAGAACTTTAGCAGTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCAAGAAACCATGTCAGTTCTaGTGGCCTGGGGAAGGGACG | + |
|
Preference number: 2 (lower is better) Translates to: LDKTGVLVSGLELGKLCKKPCQF*WPGEGT Trigger: CGTCCCTTCCCCAGGCCATCAGAACTGACATGGTTT...CTTGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCAAACCATGTCAGTTCTaGTGGCCTGGGGAAGGGACG | + |
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Preference number: 2 (lower is better) Translates to: ILDKTGVLVSGLELGKLCKPCQF*WPGEGT Trigger: CGTCCCTTCCCCAGGCCATCAGAACTGACATGGTTT...GCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCTATATTTGGATTGCAAGAATCAAAGGAAAAACACCCCACTACACGCGCACTCAGTTCTGATGGCCTaGGGAAGGGACGTGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: ILYLDCKNQRKNTPLHAHSVLMA*GRDVLA Trigger: TGCCAGCACGTCCCTTCCCCAGGCCATCAGAACTGA...GTGCGCGTGTAGTGGGGTGTTTTTCCTTTGATTCTTGCAATCCAAATATAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTTCAAACAAAGCATAACCAGAAACCAAATCGAAGAGCCTAGGTTGTACTTTAAACCATGTCAGTTCTaGTGGCCTGGGGAAGGGACG | + |
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Preference number: 2 (lower is better) Translates to: PFKQSITRNQIEEPRLYFKPCQF*WPGEGT Trigger: CGTCCCTTCCCCAGGCCATCAGAACTGACATGGTTT...AAAGTACAACCTAGGCTCTTCGATTTGGTTTCTGGTTATGCTTTGTTTGAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCGCGCACATTCTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTTTCAGCAAAATAAAATaGGTGGTGTACAAAGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: PSAHILDKTGVLVSGLELFSKIK*VVYKGH Trigger: GTGGCCTTTGTACACCACCCATTTTATTTTGCTGAA...AAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAGAATGTGCGCGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| 3UTR CAA 90 bp | GGATCAATAAAGGAAGAGATAGCATCTCTGAAAGGAAAAGCAGTCTaGCTATCTCCTCCCACTCCGGGTCCTGGAGGATTTTCTCATTTC | + |
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Preference number: 2 (lower is better) Translates to: GSIKEEIASLKGKAV*LSPPTPGPGGFSHF Trigger: GAAATGAGAAAATCCTCCAGGACCCGGAGTGGGAGGAGATAGCAAGACTGCTTTTCCTTTCAGAGATGCTATCTCTTCCTTTATTGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCAAGCGGGACAAAGAGGAATaGAGATGGCTTATGGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LDKTGVLVSGLELGKLCKRDKEE*RWLMEA Trigger: TGCTTCCATAAGCCATCTTCATTCCTCTTTGTCCCG...CTTGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGACTGCTAAAGTTCTTAAAGCAAGGCAATGAATACACACAGACCAATCGTCAACCAGTGCACACCTaGGTTGCCTATGATGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: HRLLKFLKQGNEYTQTNRQPVHT*VAYDGD Trigger: GTCTCCATCATAGGCAACTCAGGTGTGCACTGGTTG...ACGATTGGTCTGTGTGTATTCATTGCCTTGCTTTAAGAACTTTAGCAGTCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR CAA 90 bp | CCCAGCGCGCACATTCTAGACAAGACTGGTGTTCTGGTGTCAGGTTaGGAACTTGGAAAACTTTGCAAGAAGAAATATGATCTTTATGGG | + |
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Preference number: 2 (lower is better) Translates to: PSAHILDKTGVLVSG*ELGKLCKKKYDLYG Trigger: CCCATAAAGATCATATTTCTTCTTGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAGAATGTGCGCGCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| 3UTR CAA 90 bp | CCTAAGAAATGCCTCCAGGAGTTAGGCAGAAACCTCACAAAGAACTaGTCTCTAAATGCCCAAGGCTTCAGAGGAAGCAATTTACACATC | + |
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Preference number: 2 (lower is better) Translates to: PKKCLQELGRNLTKN*SLNAQGFRGSNLHI Trigger: GATGTGTAAATTGCTTCCTCTGAAGCCTTGGGCATTTAGAGACAAGTTCTTTGTGAGGTTTCTGCCTAACTCCTGGAGGCATTTCTTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR CAA 90 bp | TGCATCCCTATACCTTCACTTTTACACAACCAGTGCACACCTGAGTaGCCTATGATGGAGACAGCACTAAACTTAGCAAGCCATTACAAA | + |
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Preference number: 2 (lower is better) Translates to: CIPIPSLLHNQCTPE*PMMETALNLASHYK Trigger: TTTGTAATGGCTTGCTAAGTTTAGTGCTGTCTCCATCATAGGCAACTCAGGTGTGCACTGGTTGTGTAAAAGTGAAGGTATAGGGATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR TCA 90 bp | CACAAGAATGCAAATTCTATGAACCCAAGCTCCAAATACCTCAAGTCTAGCACACGGGACAAAGAGGAATaGAGATGGCTTATGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: HKNANSMNPSSKYLKSSTRDKEE*RWLMEA Trigger: TGCTTCCATAAGCCATCTTCATTCCTCTTTGTCCCG...TGTGCTAGACTTGAGGTATTTGGAGCTTGGGTTCATAGAATTTGCATTCTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTTCAAACAAAGCATAACCAGAAACCAAATCGAAGAGCCTAGGTTGTACTTTGGAAAGGACAGATGGTaGCTAACAGATTTCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: PFKQSITRNQIEEPRLYFGKDRW*LTDFQA Trigger: TGCCTGGAAATCTGTTAGTCACCATCTGTCCTTTCC...AAAGTACAACCTAGGCTCTTCGATTTGGTTTCTGGTTATGCTTTGTTTGAAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR TCA 90 bp | CACAAGAATGCAAATTCTATGAACCCAAGCTCCAAATACCTCAAGTCTAGCACAATGACCCTTTCAGCATaGAGCAATTATCGCCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: HKNANSMNPSSKYLKSSTMTLSA*SNYRLH Trigger: GTGAAGGCGATAATTGCTTCATGCTGAAAGGGTCAT...TGTGCTAGACTTGAGGTATTTGGAGCTTGGGTTCATAGAATTTGCATTCTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR GCA 90 bp | CACAGACTGCTAAAGTTCTTAAAGCAAGGCAATGAATACACACAGACCAATCGTGAACTTGTCTCTAAATaGCCAAGGCTTCAGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: HRLLKFLKQGNEYTQTNRELVSK*PRLQRK Trigger: CTTCCTCTGAAGCCTTGGGCATTTAGAGACAAGTTC...ACGATTGGTCTGTGTGTATTCATTGCCTTGCTTTAAGAACTTTAGCAGTCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTGGATTGCAAGAATCAAAGGAAAAACACCCCACTACACGCGCACACACACATTCTGGTGTCAGGTTTaGAACTTGGAAAACTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: IWIARIKGKTPHYTRTHTFWCQV*NLENFA Trigger: TGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAA...TGTGTGTGTGCGCGTGTAGTGGGGTGTTTTTCCTTTGATTCTTGCAATCCAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTGGATTGCAAGAATCAAAGGAAAAACACCCCACTACACGCGCACACACACAGATAATCAGAATACTTaGGGTAAGTCACCTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: IWIARIKGKTPHYTRTHTDNQNT*GKSPSF Trigger: GAAGGAAGGTGACTTACCCCAAGTATTCTGATTATC...TGTGTGTGTGCGCGTGTAGTGGGGTGTTTTTCCTTTGATTCTTGCAATCCAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGCACTAAACTTAGCAAGCCATTACAAATGTGGCATTAGCTGCTTTAAAGACAGAACACTGAAACCATaGGTAACAACCGTGCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: TALNLASHYKCGISCFKDRTLKP*VTTVPN Trigger: GTTAGGCACGGTTGTTACTCATGGTTTCAGTGTTCT...GTCTTTAAAGCAGCTAATGCCACATTTGTAATGGCTTGCTAAGTTTAGTGCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTTCAAACAAAGCATAACCAGAAACCAAATCGAAGAGCCTAGGTTGTACTTTGCAACGAAATACAAATaGCCCTTTCAGCATGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: PFKQSITRNQIEEPRLYFATKYK*PFQHEA Trigger: TGCTTCATGCTGAAAGGGTCATTTGTATTTCGTTGC...AAAGTACAACCTAGGCTCTTCGATTTGGTTTCTGGTTATGCTTTGTTTGAAGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGACTGCTAAAGTTCTTAAAGCAAGGCAATGAATACACACAGACCAATCGTGCAACGAAATACAAATaGCCCTTTCAGCATGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: HRLLKFLKQGNEYTQTNRATKYK*PFQHEA Trigger: TGCTTCATGCTGAAAGGGTCATTTGTATTTCGTTGC...ACGATTGGTCTGTGTGTATTCATTGCCTTGCTTTAAGAACTTTAGCAGTCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTTCAAACAAAGCATAACCAGAAACCAAATCGAAGAGCCTAGGTTGTACTTTCTTAAAGCAAGGCAATaGATACACACAGACCAATCG | + |
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Preference number: 2 (lower is better) Translates to: PFKQSITRNQIEEPRLYFLKARQ*IHTDQS Trigger: CGATTGGTCTGTGTGTATTCATTGCCTTGCTTTAAG...AAAGTACAACCTAGGCTCTTCGATTTGGTTTCTGGTTATGCTTTGTTTGAAGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR CCA 90 bp | AGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCAAGAAGAAATTTCAGCAAAATAAAATaGGTGGTGTACAAAGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: RLVFWCQVWNLENFARRNFSKIK*VVYKGH Trigger: GTGGCCTTTGTACACCACCCATTTTATTTTGCTGAA...ATTTCTTCTTGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGACTGCTAAAGTTCTTAAAGCAAGGCAATGAATACACACAGACCAATCGTTTCTGGTGTCAGGTTTaGAACTTGGAAAACTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: HRLLKFLKQGNEYTQTNRFWCQV*NLENFA Trigger: TGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAA...ACGATTGGTCTGTGTGTATTCATTGCCTTGCTTTAAGAACTTTAGCAGTCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR TCA 90 bp | GGAATAAACGTATCCAGATATGTTAATGGAGTCTTGTGGGACATGTTGATTTTTAGAACACTGAAACCATaGGTAACAACCGTGCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: GINVSRYVNGVLWDMLIFRTLKP*VTTVPN Trigger: GTTAGGCACGGTTGTTACTCATGGTTTCAGTGTTCT...AAAAATCAACATGTCCCACAAGACTCCATTAACATATCTGGATACGTTTATTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCTATATTTGGATTGCAAGAATCAAAGGAAAAACACCCCACTACACGCGCACGTAAAGCACAAACTCTaGCTTGTCTGTAGTTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: ILYLDCKNQRKNTPLHAHVKHKL*LVCSFS Trigger: ACTAAAACTACAGACAAGTCAGAGTTTGTGCTTTAC...GTGCGCGTGTAGTGGGGTGTTTTTCCTTTGATTCTTGCAATCCAAATATAGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| 3UTR-3UTR TCA 90 bp | CACAAGAATGCAAATTCTATGAACCCAAGCTCCAAATACCTCAAGTCTAGCACAGTAAAGCACAAACTCTaGCTTGTCTGTAGTTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: HKNANSMNPSSKYLKSSTVKHKL*LVCSFS Trigger: ACTAAAACTACAGACAAGTCAGAGTTTGTGCTTTAC...TGTGCTAGACTTGAGGTATTTGGAGCTTGGGTTCATAGAATTTGCATTCTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCTATATTTGGATTGCAAGAATCAAAGGAAAAACACCCCACTACACGCGCACGTCAGGTTTGGAACTTaGAAAACTTTGCAAGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: ILYLDCKNQRKNTPLHAHVRFGT*KTLQEE Trigger: TTCTTCTTGCAAAGTTTTCCAAGTTCCAAACCTGAC...GTGCGCGTGTAGTGGGGTGTTTTTCCTTTGATTCTTGCAATCCAAATATAGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| 3UTR CAA 90 bp | AAAACAATTCACCACAAGCCAGACCCTGCTGTCATCAAAACTGTTTaGCATCCTCAATACTGCCATAGGGTCTATAAAGAACATTTATTA | + |
|
Preference number: 2 (lower is better) Translates to: KTIHHKPDPAVIKTV*HPQYCHRVYKEHLL Trigger: TAATAAATGTTCTTTATAGACCCTATGGCAGTATTGAGGATGCAAAACAGTTTTGATGACAGCAGGGTCTGGCTTGTGGTGAATTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCACTAAACTTAGCAAGCCATTACAAATGTGGCATTAGCTGCTTTAAAGACGTCAGGTTTGGAACTTaGAAAACTTTGCAAGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TALNLASHYKCGISCFKDVRFGT*KTLQEE Trigger: TTCTTCTTGCAAAGTTTTCCAAGTTCCAAACCTGAC...GTCTTTAAAGCAGCTAATGCCACATTTGTAATGGCTTGCTAAGTTTAGTGCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAATAAACGTATCCAGATATGTTAATGGAGTCTTGTGGGACATGTTGATTTTTAACTACATTTCCAAATaGCTAAGAAATGCCTCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GINVSRYVNGVLWDMLIFNYISK*LRNASR Trigger: CCTGGAGGCATTTCTTAGGCATTTGGAAATGTAGTT...AAAAATCAACATGTCCCACAAGACTCCATTAACATATCTGGATACGTTTATTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAATAAACGTATCCAGATATGTTAATGGAGTCTTGTGGGACATGTTGATTTTTTTCTGGTGTCAGGTTTaGAACTTGGAAAACTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: GINVSRYVNGVLWDMLIFFWCQV*NLENFA Trigger: TGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAA...AAAAATCAACATGTCCCACAAGACTCCATTAACATATCTGGATACGTTTATTCC 37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTACAAATGTGGCATTAGCTGCTTTAAAGACAAAGCCCTATCTTTTTCATGACGATAATCAGAATACTTaGGGTAAGTCACCTTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ITNVALAALKTKPYLFHDDNQNT*GKSPSF Trigger: GAAGGAAGGTGACTTACCCCAAGTATTCTGATTATC...GTCATGAAAAAGATAGGGCTTTGTCTTTAAAGCAGCTAATGCCACATTTGTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAATAAACGTATCCAGATATGTTAATGGAGTCTTGTGGGACATGTTGATTTTTAGCAATTTACACATCTaGCACTTGAACAGAAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: GINVSRYVNGVLWDMLIFSNLHI*HLNRNL Trigger: CAAGTTTCTGTTCAAGTGTCAGATGTGTAAATTGCT...AAAAATCAACATGTCCCACAAGACTCCATTAACATATCTGGATACGTTTATTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCATACCCCCATGAAACCATGTCAGTTCTGATGGCCTGGGGAAGGGACGTGACACAGGCTCTGATGTaGGAAAAGACCGGAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: TAYPHETMSVLMAWGRDVTQALM*EKTGAQ Trigger: CTGTGCTCCGGTCTTTTCCAACATCAGAGCCTGTGT...CACGTCCCTTCCCCAGGCCATCAGAACTGACATGGTTTCATGGGGGTATGCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| 3UTR TCA 72 bp | GCAGGAGCTCATCGTGTCGGCCGGGACAAAGAGGAATaGAGATGGCTTATGGAAGCAAGGTGTCCGATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: AGAHRVGRDKEE*RWLMEARCPMK Trigger: CTTCATCGGACACCTTGCTTCCATAAGCCATCTTCATTCCTCTTTGTCCCGGCCGACACGATGAGCTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| 3UTR CCA 72 bp | GGCTTAGCTTTCGGTAGCTTTGGCATGAGCCAGGTGTaGTTAAGGCTGGGAGGTGTGTGTGCACATTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLAFGSFGMSQV*LRLGGVCAHSE Trigger: CTCTGAATGTGCACACACACCTCCCAGCCTTAACCACACCTGGCTCATGCCAAAGCTACCGAAAGCTAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR GCA 72 bp | CCTCCCACTCCGGGTCCTGGAGGATTTTCTCATTTCTaGACACGTCATCAGAGTTCTGCATCAGGCTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PPTPGPGGFSHF*TRHQSSASGLA Trigger: AGCTAAGCCTGATGCAGAACTCTGATGACGTGTGCAGAAATGAGAAAATCCTCCAGGACCCGGAGTGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR TCA 72 bp | CTCTATCGTAGCGTAACAGATGACTGCATACCCCCATaGAACCATGTCAGTTCTGATGGCCTGGGGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LYRSVTDDCIPP*NHVSSDGLGKG Trigger: TCCCTTCCCCAGGCCATCAGAACTGACATGGTTTCATGGGGGTATGCAGTCATCTGTTACGCTACGATAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| 3UTR CCA 72 bp | CAGGAGCATGCCCAGCGCGCACATTCTAGACAAGACTaGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: QEHAQRAHSRQD*CSGVRFGTWKT Trigger: AGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAGAATGTGCGCGCTGGGCATGCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTCAAACAAAGCATAACCAGAAACCAAATCGAAGAGCCTAGGTTGTACTTTCAGGGGAGGGCTGGCTaGCAGTGGCAGTTTGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PFKQSITRNQIEEPRLYFQGRAG*QWQFAG Trigger: TCCTGCAAACTGCCACTGCAAGCCAGCCCTCCCCTG...AAAGTACAACCTAGGCTCTTCGATTTGGTTTCTGGTTATGCTTTGTTTGAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAAGAATGCAAATTCTATGAACCCAAGCTCCAAATACCTCAAGTCTAGCACACAGGGGAGGGCTGGCTaGCAGTGGCAGTTTGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HKNANSMNPSSKYLKSSTQGRAG*QWQFAG Trigger: TCCTGCAAACTGCCACTGCAAGCCAGCCCTCCCCTG...TGTGCTAGACTTGAGGTATTTGGAGCTTGGGTTCATAGAATTTGCATTCTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR CCA 72 bp | AAAAGCAGTCTTGCTATCTCCTCCCACTCCGGGTCCTaGAGGATTTTCTCATTTCTGCACACGTCATCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KSSLAISSHSGS*RIFSFLHTSSE Trigger: CTCTGATGACGTGTGCAGAAATGAGAAAATCCTCCAGGACCCGGAGTGGGAGGAGATAGCAAGACTGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR TCA 72 bp | AACTCTGACTTGTCTGTAGTTTTAGTCTCACCAAAATaGGGCCGATTTCAGGAGCATGCCCAGCGCGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: NSDLSVVLVSPK*GRFQEHAQRAH Trigger: ATGTGCGCGCTGGGCATGCTCCTGAAATCGGCCTCATTTTGGTGAGACTAAAACTACAGACAAGTCAGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCAAGACACAGGCTCTGATGTaGGAAAAGACCGGAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LDKTGVLVSGLELGKLCKTQALM*EKTGAQ Trigger: CTGTGCTCCGGTCTTTTCCAACATCAGAGCCTGTGT...CTTGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGGATTGCAAGAATCAAAGGAAAAACACCCCACTACACGCGCACACACACAACACAGGCTCTGATGTaGGAAAAGACCGGAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: IWIARIKGKTPHYTRTHTTQALM*EKTGAQ Trigger: CTGTGCTCCGGTCTTTTCCAACATCAGAGCCTGTGT...TGTGTGTGTGCGCGTGTAGTGGGGTGTTTTTCCTTTGATTCTTGCAATCCAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| 3UTR TCA 72 bp | ACAAAGTATGACACAGTCTATCTAGTGGATGGGAGCTaGAGTCTGGACCACAAAGGAACCAGAGGCTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TKYDTVYLVDGS*SLDHKGTRGSS Trigger: ACTTGAGCCTCTGGTTCCTTTGTGGTCCAGACTTCAGCTCCCATCCACTAGATAGACTGTGTCATACTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR TCA 72 bp | CCCTATACCTTCACTTTTACACAACCAGTGCACACCTaGGTTGCCTATGATGGAGACAGCACTAAACTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: PYTFTFTQPVHT*VAYDGDSTKLS Trigger: GCTAAGTTTAGTGCTGTCTCCATCATAGGCAACTCAGGTGTGCACTGGTTGTGTAAAAGTGAAGGTATAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR GCA 72 bp | ATTTGCATCCCTATACCTTCACTTTTACACAACCAGTaGACACCTGAGTTGCCTATGATGGAGACAGCACTA | + |
|
Preference number: 3 (lower is better) Translates to: ICIPIPSLLHNQ*TPELPMMETAL Trigger: TAGTGCTGTCTCCATCATAGGCAACTCAGGTGTGCACTGGTTGTGTAAAAGTGAAGGTATAGGGATGCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR GCA 72 bp | TACAGGAAGATTCTCACTAGTGTGCTGGCTCACACCTaGGGAAAAACACTCTGCCAATCTAACAGAATACAA | + |
|
Preference number: 3 (lower is better) Translates to: YRKILTSVLAHT*GKTLCQSNRIQ Trigger: TTGTATTCTGTTAGATTGGCAGAGTGTTTTTCCGCAGGTGTGAGCCAGCACACTAGTGAGAATCTTCCTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR GCA 72 bp | ACCACAAGCCAGACCCTGCTGTCATCAAAACTGTTTTaGATCCTCAATACTGCCATAGGGTCTATAAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TTSQTLLSSKLF*ILNTAIGSIKN Trigger: GTTCTTTATAGACCCTATGGCAGTATTGAGGATGCAAAACAGTTTTGATGACAGCAGGGTCTGGCTTGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR TCA 72 bp | CTTTCGAAGCTGACCACTGCAATAGAAAACAAAGTATaGCACAGTCTATCTAGTGGATGGGAGCTGAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSKLTTAIENKV*HSLSSGWELKS Trigger: AGACTTCAGCTCCCATCCACTAGATAGACTGTGTCATACTTTGTTTTCTATTGCAGTGGTCAGCTTCGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR GCA 72 bp | ACTAGTGTGCTGGCTCACACCTGCGGAAAAACACTCTaGCAATCTAACAGAATACAATGTTTCCTTTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: TSVLAHTCGKTL*QSNRIQCFLLM Trigger: CATCAAAAGGAAACATTGTATTCTGTTAGATTGGCAGAGTGTTTTTCCGCAGGTGTGAGCCAGCACACTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR CCA 72 bp | GCTTATGAATCTGAGATGGAGAAGCAGCTTTGTGTTTaGTCCTGTGTAGGACCTGATATCAAAACTGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AYESEMEKQLCV*SCVGPDIKTAL Trigger: AAGAGCAGTTTTGATATCAGGTCCTACACAGGACCAAACACAAAGCTGCTTCTCCATCTCAGATTCATAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAGACTGCTAAAGTTCTTAAAGCAAGGCAATGAATACACACAGACCAATCGTGTTCTGGTGTCAGGTTaGGAACTTGGAAAACTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: HRLLKFLKQGNEYTQTNRVLVSG*ELGKLC Trigger: GCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAAC...ACGATTGGTCTGTGTGTATTCATTGCCTTGCTTTAAGAACTTTAGCAGTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGGATTGCAAGAATCAAAGGAAAAACACCCCACTACACGCGCACACACACAAGCACAAACTCTGACTaGTCTGTAGTTTTAGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: IWIARIKGKTPHYTRTHTSTNSD*SVVLVS Trigger: TGAGACTAAAACTACAGACAAGTCAGAGTTTGTGCT...TGTGTGTGTGCGCGTGTAGTGGGGTGTTTTTCCTTTGATTCTTGCAATCCAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| 3UTR TCA 72 bp | ATGCTTGTGTGCGTGAGGAAACCTGTTTGTAAACTCTaGAACTTGCCACAAGAAATTAAGACGCATCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: MLVCVRKPVCKL*NLPQEIKTHPD Trigger: ATCTGGATGCGTCTTAATTTCTTGTGGCAAGTTTCAGAGTTTACAAACAGGTTTCCTCACGCACACAAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAGACTGCTAAAGTTCTTAAAGCAAGGCAATGAATACACACAGACCAATCGTATACCCATTTCAAGTTaGAAAAGCCAACACACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HRLLKFLKQGNEYTQTNRIPISS*KSQHTR Trigger: CCTGGTGTGTTGGCTTTTCAAACTTGAAATGGGTAT...ACGATTGGTCTGTGTGTATTCATTGCCTTGCTTTAAGAACTTTAGCAGTCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR TCA 72 bp | GATCTTTATTTATACCTCCTACAATGCTTGTGTGCGTaGGGAAACCTGTTTGTAAACTCTGAAACTTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: DLYLYLLQCLCA*GNLFVNSETCH Trigger: GTGGCAAGTTTCAGAGTTTACAAACAGGTTTCCTCACGCACACAAGCATTGTAGGAGGTATAAATAAAGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTACAAATGTGGCATTAGCTGCTTTAAAGACAAAGCCCTATCTTTTTCATGACGTTCTGGTGTCAGGTTaGGAACTTGGAAAACTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: ITNVALAALKTKPYLFHDVLVSG*ELGKLC Trigger: GCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAAC...GTCATGAAAAAGATAGGGCTTTGTCTTTAAAGCAGCTAATGCCACATTTGTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR TCA 72 bp | AATGCCCAAGGCTTCAGAGGAAGCAATTTACACATCTaGCACTTGAACAGAAACTTGGACTTAAGCAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: NAQGFRGSNLHI*HLNRNLDLSKL Trigger: TAATTTGCTTAAGTCCAAGTTTCTGTTCAAGTGTCAGATGTGTAAATTGCTTCCTCTGAAGCCTTGGGCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR GCA 72 bp | CAATTATCGCCTTCACAGAGACTCATAACCATACACTaGCATCATTTTAATGGCGAGTTTAAAATCTGCGTT | + |
|
Preference number: 3 (lower is better) Translates to: QLSPSQRLITIH*HHFNGEFKICV Trigger: AACGCAGATTTTAAACTCGCCATTAAAATGATGGCAGTGTATGGTTATGAGTCTCTGTGAAGGCGATAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR CCA 72 bp | ACCTTCTATGAAACATTACTGATGCCCATAACTATGTaGGCTTTTCAACTGCACAGACTGCTAAAGTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: TFYETLLMPITM*AFQLHRLLKFL Trigger: TAAGAACTTTAGCAGTCTGTGCAGTTGAAAAGCCCACATAGTTATGGGCATCAGTAATGTTTCATAGAAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR TCA 72 bp | CCTGATATCAAAACTGCTCTTCAGAGTGGATACATTTaGATGTTTCAATGCAAACAAACCCATCTTTCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PDIKTALQSGYI*MFQCKQTHLSK Trigger: CTTCGAAAGATGGGTTTGTTTGCATTGAAACATTCAAATGTATCCACTCTGAAGAGCAGTTTTGATATCAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR TCA 72 bp | AGGTGTTCACTGGGAGAGGGGAGAGTTATACAATATTaGTCTGTGTCATTCTTAATACTTAAAGGAAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: RCSLGEGRVIQY*SVSFLILKGNC Trigger: ACAGTTTCCTTTAAGTATTAAGAATGACACAGATCAATATTGTATAACTCTCCCCTCTCCCAGTGAACACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR GCA 72 bp | ATACACTGCCATCATTTTAATGGCGAGTTTAAAATCTaGGTTCAGAACTGTAGTACTAGCCAAAGAGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: IHCHHFNGEFKI*VQNCSTSQRDK Trigger: TTTGTCTCTTTGGCTAGTACTACAGTTCTGAACGCAGATTTTAAACTCGCCATTAAAATGATGGCAGTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR CCA 72 bp | TTCACAATGAATGACAGTTTTGATAATCAGAATACTTaGGGTAAGTCACCTTCCTTCCTTCTGCTCTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: FTMNDSFDNQNT*GKSPSFLLLFK Trigger: CTTAAAGAGCAGAAGGAAGGAAGGTGACTTACCCCAAGTATTCTGATTATCAAAACTGTCATTCATTGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAATAAACGTATCCAGATATGTTAATGGAGTCTTGTGGGACATGTTGATTTTTTGTCAGGTTTGGAACTaGGAAAACTTTGCAAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GINVSRYVNGVLWDMLIFCQVWN*ENFARR Trigger: TCTTCTTGCAAAGTTTTCCAAGTTCCAAACCTGACA...AAAAATCAACATGTCCCACAAGACTCCATTAACATATCTGGATACGTTTATTCC 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTACAAATGTGGCATTAGCTGCTTTAAAGACAAAGCCCTATCTTTTTCATGACTGTCAGGTTTGGAACTaGGAAAACTTTGCAAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ITNVALAALKTKPYLFHDCQVWN*ENFARR Trigger: TCTTCTTGCAAAGTTTTCCAAGTTCCAAACCTGACA...GTCATGAAAAAGATAGGGCTTTGTCTTTAAAGCAGCTAATGCCACATTTGTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| 3UTR TCA 72 bp | ACTGCACAGACTGCTAAAGTTCTTAAAGCAAGGCAATaGATACACACAGACCAATCGTTAAGATTCATATTA | + |
|
Preference number: 3 (lower is better) Translates to: TAQTAKVLKARQ*IHTDQSLRFIL Trigger: TAATATGAATCTTAACGATTGGTCTGTGTGTATTCATTGCCTTGCTTTAAGAACTTTAGCAGTCTGTGCAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGCTCTGATGTTGGAAAAGACCGGAGCACAGCCAACGGAGCTGCTCGCAGAGGTTTACAAAGGGGCTaGAAAGCTCGGCAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGSDVGKDRSTANGAARRGLQRG*KARQAG Trigger: GCCTGCTTGCCGAGCTTTCCAGCCCCTTTGTAAACC...TCTGCGAGCAGCTCCGTTGGCTGTGCTCCGGTCTTTTCCAACATCAGAGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCTCTGATGTTGGAAAAGACCGGAGCACAGCCAACGGAGCTGCTCGCAGACACAAAGAGTGGCACGTaGATACTACCCTTGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QALMLEKTGAQPTELLADTKSGT*ILPLSS Trigger: GGAACTCAAGGGTAGTATCCACGTGCCACTCTTTGT...GTCTGCGAGCAGCTCCGTTGGCTGTGCTCCGGTCTTTTCCAACATCAGAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCGCGCACATTCTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGTTTACAAAGGGGCTaGAAAGCTCGGCAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSAHILDKTGVLVSGLELGLQRG*KARQAG Trigger: GCCTGCTTGCCGAGCTTTCCAGCCCCTTTGTAAACC...AAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAGAATGTGCGCGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CCA 90 bp | CAAACTAGATTTCTTCAGCTTTGGGTTTTCTCTGATGCTGGAATCTCATCGGGGGGTTTACAAAGGGGCTaGAAAGCTCGGCAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTRFLQLWVFSDAGISSGGLQRG*KARQAG Trigger: GCCTGCTTGCCGAGCTTTCCAGCCCCTTTGTAAACC...CCCCGATGAGATTCCAGCATCAGAGAAAACCCAAAGCTGAAGAAATCTAGTTTG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000135818.8 |
||
| 3UTR CAA 72 bp | AAGGAAGAGATAGCATCTCTGAAAGGAAAAGCAGTCTaGCTATCTCCTCCCACTCCGGGTCCTGGAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: KEEIASLKGKAV*LSPPTPGPGGF Trigger: AAATCCTCCAGGACCCGGAGTGGGAGGAGATAGCAAGACTGCTTTTCCTTTCAGAGATGCTATCTCTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCCACCGAATCACCAGCCATTTTCCTGCAGAGAATAATCCCCATGAACACTACAAAGAGTGGCACGTaGATACTACCCTTGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KATESPAIFLQRIIPMNTTKSGT*ILPLSS Trigger: GGAACTCAAGGGTAGTATCCACGTGCCACTCTTTGT...AGTGTTCATGGGGATTATTCTCTGCAGGAAAATGGCTGGTGATTCGGTGGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CCA 90 bp | TCACTTAATCCACAAGAGCCATTGACTGGCATTGACTGGGTAGCTCCGGTCTTGTCAAAGAACCACCTCTaGTTTACAAAGGGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLNPQEPLTGIDWVAPVLSKNHL*FTKGLE Trigger: TTCCAGCCCCTTTGTAAACCAGAGGTGGTTCTTTGA...CAAGACCGGAGCTACCCAGTCAATGCCAGTCAATGGCTCTTGTGGATTAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135818.8 |
||
| CDS-3UTR CCA 90 bp | TCACTTAATCCACAAGAGCCATTGACTGGCATTGACTGGGTAGCTCCGGTCTTGTGGCTTTGGAAAACTTaGGGTACTTCAGGGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLNPQEPLTGIDWVAPVLWLWKT*GTSGLQ Trigger: TTGAAGCCCTGAAGTACCCCAAGTTTTCCAAAGCCA...CAAGACCGGAGCTACCCAGTCAATGCCAGTCAATGGCTCTTGTGGATTAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135818.8 |
||
| CDS-3UTR CCA 90 bp | AGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCAAGAAGAAATGGTTTACAAAGGGGCTaGAAAGCTCGGCAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLVFWCQVWNLENFARRNGLQRG*KARQAG Trigger: GCCTGCTTGCCGAGCTTTCCAGCCCCTTTGTAAACC...ATTTCTTCTTGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCCACCGAATCACCAGCCATTTTCCTGCAGAGAATAATCCCCATGAACACTTCAAAGAACCACCTCTaGTTTACAAAGGGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KATESPAIFLQRIIPMNTSKNHL*FTKGLE Trigger: TTCCAGCCCCTTTGTAAACCAGAGGTGGTTCTTTGA...AGTGTTCATGGGGATTATTCTCTGCAGGAAAATGGCTGGTGATTCGGTGGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCCACCGAATCACCAGCCATTTTCCTGCAGAGAATAATCCCCATGAACACTTGGCTTTGGAAAACTTaGGGTACTTCAGGGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KATESPAIFLQRIIPMNTWLWKT*GTSGLQ Trigger: TTGAAGCCCTGAAGTACCCCAAGTTTTCCAAAGCCA...AGTGTTCATGGGGATTATTCTCTGCAGGAAAATGGCTGGTGATTCGGTGGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGTAGCTCCGGTCTTGCTAATAAGCACAAACTAGATTTCTTCAGCTTTGGGCGTGGATACTACCCTTaGGTTCCATTCAATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGSSGLANKHKLDFFSFGRGYYP*VPFNLL Trigger: AAGAAGATTGAATGGAACTCAAGGGTAGTATCCACG...CCCAAAGCTGAAGAAATCTAGTTTGTGCTTATTAGCAAGACCGGAGCTACCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135818.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGCTCCGGTCTTGCTAATAAGCACAAACTAGATTTCTTCAGCTTTGGGTTTACAAAGAGTGGCACGTaGATACTACCCTTGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSSGLANKHKLDFFSFGFTKSGT*ILPLSS Trigger: GGAACTCAAGGGTAGTATCCACGTGCCACTCTTTGT...AAACCCAAAGCTGAAGAAATCTAGTTTGTGCTTATTAGCAAGACCGGAGCTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135818.8 |
||
| CDS-3UTR CCA 90 bp | CTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCAAGTGGCTTTGGAAAACTTaGGGTACTTCAGGGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LDKTGVLVSGLELGKLCKWLWKT*GTSGLQ Trigger: TTGAAGCCCTGAAGTACCCCAAGTTTTCCAAAGCCA...CTTGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| 3UTR CAA 72 bp | ATACCTTCACTTTTACACAACCAGTGCACACCTGAGTaGCCTATGATGGAGACAGCACTAAACTTAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IPSLLHNQCTPE*PMMETALNLAS Trigger: GCTTGCTAAGTTTAGTGCTGTCTCCATCATAGGCAACTCAGGTGTGCACTGGTTGTGTAAAAGTGAAGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| CDS-3UTR TCA 90 bp | CTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCAAGCGTGGATACTACCCTTaGGTTCCATTCAATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LDKTGVLVSGLELGKLCKRGYYP*VPFNLL Trigger: AAGAAGATTGAATGGAACTCAAGGGTAGTATCCACG...CTTGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTATATTTGGATTGCAAGAATCAAAGGAAAAACACCCCACTACACGCGCACACAAAGAGTGGCACGTaGATACTACCCTTGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILYLDCKNQRKNTPLHAHTKSGT*ILPLSS Trigger: GGAACTCAAGGGTAGTATCCACGTGCCACTCTTTGT...GTGCGCGTGTAGTGGGGTGTTTTTCCTTTGATTCTTGCAATCCAAATATAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCTCAAAGAACCACCTCTaGTTTACAAAGGGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILDKTGVLVSGLELGKLCSKNHL*FTKGLE Trigger: TTCCAGCCCCTTTGTAAACCAGAGGTGGTTCTTTGA...GCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTATATTTGGATTGCAAGAATCAAAGGAAAAACACCCCACTACACGCGCACCCAACTAACAAAGAGTaGCACGTGGATACTACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILYLDCKNQRKNTPLHAHPTNKE*HVDTTL Trigger: AAGGGTAGTATCCACGTGCCACTCTTTGTTAGTTGG...GTGCGCGTGTAGTGGGGTGTTTTTCCTTTGATTCTTGCAATCCAAATATAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR TCA 90 bp | CACAGACTGCTAAAGTTCTTAAAGCAAGGCAATGAATACACACAGACCAATCGTCGTGGATACTACCCTTaGGTTCCATTCAATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HRLLKFLKQGNEYTQTNRRGYYP*VPFNLL Trigger: AAGAAGATTGAATGGAACTCAAGGGTAGTATCCACG...ACGATTGGTCTGTGTGTATTCATTGCCTTGCTTTAAGAACTTTAGCAGTCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAATTTCAATTCCCATCTTTAAACATACCAGAACTTGCCAGACTCTATCTGTGGCTTTGGAAAACTTaGGGTACTTCAGGGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LEFQFPSLNIPELARLYLWLWKT*GTSGLQ Trigger: TTGAAGCCCTGAAGTACCCCAAGTTTTCCAAAGCCA...CAGATAGAGTCTGGCAAGTTCTGGTATGTTTAAAGATGGGAATTGAAATTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAATTTCAATTCCCATCTTTAAACATACCAGAACTTGCCAGACTCTATCTGCGTGGATACTACCCTTaGGTTCCATTCAATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEFQFPSLNIPELARLYLRGYYP*VPFNLL Trigger: AAGAAGATTGAATGGAACTCAAGGGTAGTATCCACG...CAGATAGAGTCTGGCAAGTTCTGGTATGTTTAAAGATGGGAATTGAAATTCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| CDS-3UTR TCA 90 bp | CACAGACTGCTAAAGTTCTTAAAGCAAGGCAATGAATACACACAGACCAATCGTTCAATAAATCAGAAATaGGGTAGCCTGAAGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HRLLKFLKQGNEYTQTNRSINQK*GSLKQL Trigger: CAACTGCTTCAGGCTACCTCATTTCTGATTTATTGA...ACGATTGGTCTGTGTGTATTCATTGCCTTGCTTTAAGAACTTTAGCAGTCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| CDS-3UTR CCA 90 bp | ATTACAAATGTGGCATTAGCTGCTTTAAAGACAAAGCCCTATCTTTTTCATGACTCAAAGAACCACCTCTaGTTTACAAAGGGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ITNVALAALKTKPYLFHDSKNHL*FTKGLE Trigger: TTCCAGCCCCTTTGTAAACCAGAGGTGGTTCTTTGA...GTCATGAAAAAGATAGGGCTTTGTCTTTAAAGCAGCTAATGCCACATTTGTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCATACCCCCATGAAACCATGTCAGTTCTGATGGCCTGGGGAAGGGACGTGGTGCAGATGACCGCCTaGGTGCTCGCCTCCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TAYPHETMSVLMAWGRDVVQMTA*VLASIA Trigger: GGCTATGGAGGCGAGCACCAAGGCGGTCATCTGCAC...CACGTCCCTTCCCCAGGCCATCAGAACTGACATGGTTTCATGGGGGTATGCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CAA 90 bp | TCACTTAATCCACAAGAGCCATTGACTGGCATTGACTGGGTAGCTCCGGTCTTGGTGCAGATGACCGCCTaGGTGCTCGCCTCCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLNPQEPLTGIDWVAPVLVQMTA*VLASIA Trigger: GGCTATGGAGGCGAGCACCAAGGCGGTCATCTGCAC...CAAGACCGGAGCTACCCAGTCAATGCCAGTCAATGGCTCTTGTGGATTAAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135818.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCTCTGATGTTGGAAAAGACCGGAGCACAGCCAACGGAGCTGCTCGCAGATTGGCTTTGGAAAACTaGGGGTACTTCAGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TGSDVGKDRSTANGAARRLALEN*GYFRAS Trigger: TGAAGCCCTGAAGTACCCCAAGTTTTCCAAAGCCAA...TCTGCGAGCAGCTCCGTTGGCTGTGCTCCGGTCTTTTCCAACATCAGAGCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CAA 90 bp | CTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCAAGGTGCAGATGACCGCCTaGGTGCTCGCCTCCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LDKTGVLVSGLELGKLCKVQMTA*VLASIA Trigger: GGCTATGGAGGCGAGCACCAAGGCGGTCATCTGCAC...CTTGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCATACCCCCATGAAACCATGTCAGTTCTGATGGCCTGGGGAAGGGACGTGTTGGCTTTGGAAAACTaGGGGTACTTCAGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TAYPHETMSVLMAWGRDVLALEN*GYFRAS Trigger: TGAAGCCCTGAAGTACCCCAAGTTTTCCAAAGCCAA...CACGTCCCTTCCCCAGGCCATCAGAACTGACATGGTTTCATGGGGGTATGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCATACCCCCATGAAACCATGTCAGTTCTGATGGCCTGGGGAAGGGACGTGATCCTTGGCTTTCTCTaGTCTGATGAGGGAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: TAYPHETMSVLMAWGRDVILGFL*SDEGDD Trigger: GTCATCTCCCTCATCAGACAAGAGAAAGCCAAGGAT...CACGTCCCTTCCCCAGGCCATCAGAACTGACATGGTTTCATGGGGGTATGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCTCTGATGTTGGAAAAGACCGGAGCACAGCCAACGGAGCTGCTCGCAGATTGATGACATTGGCTTaGGAAAACTTGGGGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TGSDVGKDRSTANGAARRLMTLA*ENLGYF Trigger: GAAGTACCCCAAGTTTTCCAAAGCCAATGTCATCAA...TCTGCGAGCAGCTCCGTTGGCTGTGCTCCGGTCTTTTCCAACATCAGAGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGCGCGCACATTCTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTATCCTTGGCTTTCTCTaGTCTGATGAGGGAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSAHILDKTGVLVSGLELILGFL*SDEGDD Trigger: GTCATCTCCCTCATCAGACAAGAGAAAGCCAAGGAT...AAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAGAATGTGCGCGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS CCA 90 bp | TCTGGTTTACAAAGGGGCTGGAAAGCTCGGCAAGCAGGCGGAAATTaGCAATGTAGGCAAGCGCTCCAGTTGTCAATACAAAGTAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: SGLQRGWKARQAGGN*QCRQALQLSIQSSM Trigger: CATACTACTTTGTATTGACAACTGGAGCGCTTGCCTACATTGCCAATTTCCGCCTGCTTGCCGAGCTTTCCAGCCCCTTTGTAAACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000135818.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCACTAAACTTAGCAAGCCATTACAAATGTGGCATTAGCTGCTTTAAAGACGTGCAGATGACCGCCTaGGTGCTCGCCTCCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TALNLASHYKCGISCFKDVQMTA*VLASIA Trigger: GGCTATGGAGGCGAGCACCAAGGCGGTCATCTGCAC...GTCTTTAAAGCAGCTAATGCCACATTTGTAATGGCTTGCTAAGTTTAGTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGCGCGCACATTCTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTTTGATGACATTGGCTTaGGAAAACTTGGGGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSAHILDKTGVLVSGLELLMTLA*ENLGYF Trigger: GAAGTACCCCAAGTTTTCCAAAGCCAATGTCATCAA...AAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAGAATGTGCGCGCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCATACCCCCATGAAACCATGTCAGTTCTGATGGCCTGGGGAAGGGACGTGCATCCTTTCGTGATTTaGATCATCCACATGATATTC | + |
|
Preference number: 5 (lower is better) Translates to: TAYPHETMSVLMAWGRDVHPFVI*IIHMIF Trigger: GAATATCATGTGGATGATCAAAATCACGAAAGGATG...CACGTCCCTTCCCCAGGCCATCAGAACTGACATGGTTTCATGGGGGTATGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CAA 90 bp | TCACTTAATCCACAAGAGCCATTGACTGGCATTGACTGGGTAGCTCCGGTCTTGATTCCATTGATGACATaGGCTTTGGAAAACTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLNPQEPLTGIDWVAPVLIPLMT*ALENLG Trigger: CCCCAAGTTTTCCAAAGCCAATGTCATCAATGGAAT...CAAGACCGGAGCTACCCAGTCAATGCCAGTCAATGGCTCTTGTGGATTAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135818.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCCACCGAATCACCAGCCATTTTCCTGCAGAGAATAATCCCCATGAACACTACGTGGATACTACCCTaGAGTTCCATTCAATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KATESPAIFLQRIIPMNTTWILP*SSIQSS Trigger: AGAAGATTGAATGGAACTCAAGGGTAGTATCCACGT...AGTGTTCATGGGGATTATTCTCTGCAGGAAAATGGCTGGTGATTCGGTGGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCCACCGAATCACCAGCCATTTTCCTGCAGAGAATAATCCCCATGAACACTTTGATGACATTGGCTTaGGAAAACTTGGGGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: KATESPAIFLQRIIPMNTLMTLA*ENLGYF Trigger: GAAGTACCCCAAGTTTTCCAAAGCCAATGTCATCAA...AGTGTTCATGGGGATTATTCTCTGCAGGAAAATGGCTGGTGATTCGGTGGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CAA 90 bp | GGTAGCTCCGGTCTTGCTAATAAGCACAAACTAGATTTCTTCAGCTTTGGGTTTTTGGCTTTGGAAAACTaGGGGTACTTCAGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSSGLANKHKLDFFSFGFLALEN*GYFRAS Trigger: TGAAGCCCTGAAGTACCCCAAGTTTTCCAAAGCCAA...AAACCCAAAGCTGAAGAAATCTAGTTTGTGCTTATTAGCAAGACCGGAGCTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135818.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCTTGGCTTTGGAAAACTaGGGGTACTTCAGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILDKTGVLVSGLELGKLCLALEN*GYFRAS Trigger: TGAAGCCCTGAAGTACCCCAAGTTTTCCAAAGCCAA...GCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CAA 90 bp | CTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCAAGATGAGGGAGATGACTTaGATGCATCCTTTCGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: LDKTGVLVSGLELGKLCKMREMT*MHPFVI Trigger: AATCACGAAAGGATGCATCAAAGTCATCTCCCTCAT...CTTGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CAA 90 bp | AGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCAAGAAGAAATATCCTTGGCTTTCTCTaGTCTGATGAGGGAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLVFWCQVWNLENFARRNILGFL*SDEGDD Trigger: GTCATCTCCCTCATCAGACAAGAGAAAGCCAAGGAT...ATTTCTTCTTGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCATTCCATTGATGACATaGGCTTTGGAAAACTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ILDKTGVLVSGLELGKLCIPLMT*ALENLG Trigger: CCCCAAGTTTTCCAAAGCCAATGTCATCAATGGAAT...GCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
||
| CDS-3UTR CAA 90 bp | CACAAGAATGCAAATTCTATGAACCCAAGCTCCAAATACCTCAAGTCTAGCACAATTCCATTGATGACATaGGCTTTGGAAAACTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HKNANSMNPSSKYLKSSTIPLMT*ALENLG Trigger: CCCCAAGTTTTCCAAAGCCAATGTCATCAATGGAAT...TGTGCTAGACTTGAGGTATTTGGAGCTTGGGTTCATAGAATTTGCATTCTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCAAACAAAGCATAACCAGAAACCAAATCGAAGAGCCTAGGTTGTACTTTATTCCATTGATGACATaGGCTTTGGAAAACTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PFKQSITRNQIEEPRLYFIPLMT*ALENLG Trigger: CCCCAAGTTTTCCAAAGCCAATGTCATCAATGGAAT...AAAGTACAACCTAGGCTCTTCGATTTGGTTTCTGGTTATGCTTTGTTTGAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| CDS-3UTR CAA 90 bp | CTAGACAAGACTGGTGTTCTGGTGTCAGGTTTGGAACTTGGAAAACTTTGCAAGCATCCTTTCGTGATTTaGATCATCCACATGATATTC | + |
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Preference number: 5 (lower is better) Translates to: LDKTGVLVSGLELGKLCKHPFVI*IIHMIF Trigger: GAATATCATGTGGATGATCAAAATCACGAAAGGATG...CTTGCAAAGTTTTCCAAGTTCCAAACCTGACACCAGAACACCAGTCTTGTCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| CDS-3UTR CAA 90 bp | ATTCTATATTTGGATTGCAAGAATCAAAGGAAAAACACCCCACTACACGCGCACATGAGGGAGATGACTTaGATGCATCCTTTCGTGATT | + |
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Preference number: 5 (lower is better) Translates to: ILYLDCKNQRKNTPLHAHMREMT*MHPFVI Trigger: AATCACGAAAGGATGCATCAAAGTCATCTCCCTCAT...GTGCGCGTGTAGTGGGGTGTTTTTCCTTTGATTCTTGCAATCCAAATATAGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| CDS-3UTR CAA 90 bp | AAGCACAAACTAGATTTCTTCAGCTTTGGGTTTTCTCTGATGCTGGAATCTCATTTGATGACATTGGCTTaGGAAAACTTGGGGTACTTC | + |
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Preference number: 5 (lower is better) Translates to: KHKLDFFSFGFSLMLESHLMTLA*ENLGYF Trigger: GAAGTACCCCAAGTTTTCCAAAGCCAATGTCATCAA...ATGAGATTCCAGCATCAGAGAAAACCCAAAGCTGAAGAAATCTAGTTTGTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135818.8 |
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| CDS-3UTR CAA 90 bp | ACAGCACTAAACTTAGCAAGCCATTACAAATGTGGCATTAGCTGCTTTAAAGACATGAGGGAGATGACTTaGATGCATCCTTTCGTGATT | + |
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Preference number: 5 (lower is better) Translates to: TALNLASHYKCGISCFKDMREMT*MHPFVI Trigger: AATCACGAAAGGATGCATCAAAGTCATCTCCCTCAT...GTCTTTAAAGCAGCTAATGCCACATTTGTAATGGCTTGCTAAGTTTAGTGCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| CDS-3UTR CAA 90 bp | ATTACAAATGTGGCATTAGCTGCTTTAAAGACAAAGCCCTATCTTTTTCATGACCATCCTTTCGTGATTTaGATCATCCACATGATATTC | + |
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Preference number: 5 (lower is better) Translates to: ITNVALAALKTKPYLFHDHPFVI*IIHMIF Trigger: GAATATCATGTGGATGATCAAAATCACGAAAGGATG...GTCATGAAAAAGATAGGGCTTTGTCTTTAAAGCAGCTAATGCCACATTTGTAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 |
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| CDS CCA 72 bp | CAAAGGGGCTGGAAAGCTCGGCAAGCAGGCGGAAATTaGCAATGTAGGCAAGCGCTCCAGTTGTCAATACAA | + |
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Preference number: 6 (lower is better) Translates to: QRGWKARQAGGN*QCRQALQLSIQ Trigger: TTGTATTGACAACTGGAGCGCTTGCCTACATTGCCAATTTCCGCCTGCTTGCCGAGCTTTCCAGCCCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000135818.8 ENSMUST00000155309.8 |
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| CDS CCA 72 bp | GGGCTTCAAAGAACCACCTCTGGTTTACAAAGGGGCTaGAAAGCTCGGCAAGCAGGCGGAAATTGGCAATGT | + |
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Preference number: 6 (lower is better) Translates to: GLQRTTSGLQRG*KARQAGGNWQC Trigger: ACATTGCCAATTTCCGCCTGCTTGCCGAGCTTTCCAGCCCCTTTGTAAACCAGAGGTGGTTCTTTGAAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000135818.8 ENSMUST00000155309.8 |
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| CDS CAA 90 bp | GCTCGGCAAGCAGGCGGAAATTGGCAATGTAGGCAAGCGCTCCAGTaGTCAATACAAAGTAGTATGCAGTTAGTCCTGCGCAATGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: ARQAGGNWQCRQALQ*SIQSSMQLVLRNGE Trigger: TTCACCATTGCGCAGGACTAACTGCATACTACTTTGTATTGACAACTGGAGCGCTTGCCTACATTGCCAATTTCCGCCTGCTTGCCGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000135818.8 ENSMUST00000155309.8 |
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| CDS CAA 72 bp | GAGTTTCCCGTTCTGAAGGCTATCCTTGGCTTTCTCTaGTCTGATGAGGGAGATGACTTTGATGCATCCTTT | + |
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Preference number: 6 (lower is better) Translates to: EFPVLKAILGFL*SDEGDDFDASF Trigger: AAAGGATGCATCAAAGTCATCTCCCTCATCAGACAAGAGAAAGCCAAGGATAGCCTTCAGAACGGGAAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| CDS CAA 90 bp | ACCACCGTCATAAGAATTCCATTGATGACATTGGCTTTGGAAAACTaGGGGTACTTCAGGGCTTCAAAGAACCACCTCTGGTTTACAAAG | + |
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Preference number: 6 (lower is better) Translates to: TTVIRIPLMTLALEN*GYFRASKNHLWFTK Trigger: CTTTGTAAACCAGAGGTGGTTCTTTGAAGCCCTGAAGTACCCCAAGTTTTCCAAAGCCAATGTCATCAATGGAATTCTTATGACGGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000135818.8 ENSMUST00000155309.8 |
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| CDS CAA 72 bp | TCCTTGGCTTTCTCTTGTCTGATGAGGGAGATGACTTaGATGCATCCTTTCGTGATTTTGATCATCCACATG | + |
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Preference number: 6 (lower is better) Translates to: SLAFSCLMREMT*MHPFVILIIHM Trigger: CATGTGGATGATCAAAATCACGAAAGGATGCATCAAAGTCATCTCCCTCATCAGACAAGAGAAAGCCAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| CDS CAA 90 bp | TCTTGTCTGATGAGGGAGATGACTTTGATGCATCCTTTCGTGATTTaGATCATCCACATGATATTCATCACGTCTAAAATAACACAAGTA | + |
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Preference number: 6 (lower is better) Translates to: SCLMREMTLMHPFVI*IIHMIFITSKITQV Trigger: TACTTGTGTTATTTTAGACGTGATGAATATCATGTGGATGATCAAAATCACGAAAGGATGCATCAAAGTCATCTCCCTCATCAGACAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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| CDS CAA 72 bp | ATGAGGGAGATGACTTTGATGCATCCTTTCGTGATTTaGATCATCCACATGATATTCATCACGTCTAAAATA | + |
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Preference number: 6 (lower is better) Translates to: MREMTLMHPFVI*IIHMIFITSKI Trigger: TATTTTAGACGTGATGAATATCATGTGGATGATCAAAATCACGAAAGGATGCATCAAAGTCATCTCCCTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029777.14 ENSMUST00000128909.8 ENSMUST00000155309.8 |
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