Pregenerated sensors for TLCD3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058966Ensembl transcript IDs: ENSMUST00000079423.7, ENSMUST00000098032.11, ENSMUST00000205324.2, ENSMUST00000205722.2, ENSMUST00000207020.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGTCCTGCCTGCCAATCTaGCCTCAGCTCCCGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGSCLPI*PQLPRE Trigger: TTCCCTCGGGAGCTGAGGTCAGATTGGCAGGCAGGA...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGACTCCTTGGTCCAAGTaGGCCCCATCTCCTCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGTPWSK*APSPPF Trigger: GAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGT...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGCTTCTCTCTCCCGGGTaGTGGGGAGCAGAGAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGLLSPG*WGAEKD Trigger: ATCCTTCTCTGCTCCCCATCACCCGGGAGAGAGAAG...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGCCCTCTCTTCCTGCCTaGCAATCTGACCTCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGPSLPA*QSDLSS Trigger: GGAGCTGAGGTCAGATTGGCAGGCAGGAAGAGAGGG...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCGGCTGTGGGGGTAACTaGCCTGTCAGGGCCCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPGCGGN*PVRAQV Trigger: CACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCC...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR TCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCACTCCTTGGTCCAAGTaGGCCCCATCTCCTCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: APVPRAAQRWKGCRGATATPWSK*APSPPF Trigger: GAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGT...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR GCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCCCCTCTCTTCCTGCCTaGCAATCTGACCTCAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: APVPRAAQRWKGCRGATAPSLPA*QSDLSS Trigger: GGAGCTGAGGTCAGATTGGCAGGCAGGAAGAGAGGG...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR CCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCCTGTCAGGGCCCAGGTaGGGGGAGTTAGGATGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: APVPRAAQRWKGCRGATALSGPR*GELGCL Trigger: AAGACATCCTAACTCCCCCCACCTGGGCCCTGACAG...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGGAGCAGAGAAGGATTTaGAGCAGCAGGGCTAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGEQRRI*SSRARM Trigger: CATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTC...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCTCCTGCCTGCCAATCTaGCCTCAGCTCCCGAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LPGDGEQRRICSSRARMSSCLPI*PQLPRE Trigger: TTCCCTCGGGAGCTGAGGTCAGATTGGCAGGCAGGA...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCCTTCTCTCTCCCGGGTaGTGGGGAGCAGAGAAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPLLSPG*WGAEKD Trigger: ATCCTTCTCTGCTCCCCATCACCCGGGAGAGAGAAG...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCCCCTCTCTTCCTGCCTaGCAATCTGACCTCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPPSLPA*QSDLSS Trigger: GGAGCTGAGGTCAGATTGGCAGGCAGGAAGAGAGGG...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR GCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCGAGCAGAGAAGGATTTaGAGCAGCAGGGCTAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: APVPRAAQRWKGCRGATAEQRRI*SSRARM Trigger: CATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTC...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCCTGTCAGGGCCCAGGTaGGGGGAGTTAGGATGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPLSGPR*GELGCL Trigger: AAGACATCCTAACTCCCCCCACCTGGGCCCTGACAG...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCCACCCTTATGTCCCTTaGCTCCTTGGTCCAAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPHPYVP*LLGPSE Trigger: CTCACTTGGACCAAGGAGTCAAGGGACATAAGGGTG...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR CAA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGATGTCCCTTGACTCCTaGGTCCAAGTGAGCCCCATC | + |
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Preference number: 3 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGMSLDS*VQVSPI Trigger: GATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR CAA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGCTAAGTCCATCTGTCTaGGGGCTGTCAAGGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGLSPSV*GLSRKG Trigger: CCCTTTCCTTGACAGCCCCAAGACAGATGGACTTAG...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCCTAAGTCCATCTGTCTaGGGGCTGTCAAGGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPLSPSV*GLSRKG Trigger: CCCTTTCCTTGACAGCCCCAAGACAGATGGACTTAG...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCATGTCCCTTGACTCCTaGGTCCAAGTGAGCCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: LPGDGEQRRICSSRARMSMSLDS*VQVSPI Trigger: GATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCACTAAGTCCATCTGTCTaGGGGCTGTCAAGGAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: MSLDSLVQVSPISSLPLSLSPSV*GLSRKG Trigger: CCCTTTCCTTGACAGCCCCAAGACAGATGGACTTAG...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCCCTTCCCCTTTCATTTaGTTAACACAGAGGCAAGAA | + |
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Preference number: 3 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPPSPFI*LTQRQE Trigger: TTCTTGCCTCTGTGTTAACAAAATGAAAGGGGAAGG...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCCCTTCCCCTTTCATTTaGTTAACACAGAGGCAAGAA | + |
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Preference number: 3 (lower is better) Translates to: LPGDGEQRRICSSRARMSPSPFI*LTQRQE Trigger: TTCTTGCCTCTGTGTTAACAAAATGAAAGGGGAAGG...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR TCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCGTGCGGCGCCCAGGTTaGCGTGGGCCGGGATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATAVRRPG*RGPGWP Trigger: TGGCCATCCCGGCCCACGTCAACCTGGGCGCCGCAC...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGCCACAGCCCAGGTGCTaGCCAGGGCTCTGGGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGPQPRC*PGLWAS Trigger: GGACGCCCAGAGCCCTGGGCAGCACCTGGGCTGTGG...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGGCGCCCAGGTTGACGTaGGCCGGGATGGCCATGGGC | + |
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Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGAPRLT*AGMAMG Trigger: GCCCATGGCCATCCCGGCCCACGTCAACCTGGGCGC...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR TCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGGATGGCCATGGGCACTaGGAGCAGGGGCAGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGDGHGH*EQGQAS Trigger: GCTGGCCTGCCCCTGCTCTCAGTGCCCATGGCCATC...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGGTACCACAGCCCAGGTaGTGCCCAGGGCTCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGVPQPR*CPGLWA Trigger: CGCCCAGAGCCCTGGGCAGCACCTGGGCTGTGGTAC...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGGGGTGCGAGGAGCAGTaGGGCGCCCAGGTTGACGTG | + |
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Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGGCEEQ*GAQVDV Trigger: CACGTCAACCTGGGCGCCGCACTGCTCCTCGCACCC...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 69% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGTGCTGCCCAGGGCTCTaGGCGTCCCGTCTTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGCCPGL*ASRLPL Trigger: GAGGGGAAGACGGGACGCCCAGAGCCCTGGGCAGCA...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR TCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCGATGGCCATGGGCACTaGGAGCAGGGGCAGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATADGHGH*EQGQAS Trigger: GCTGGCCTGCCCCTGCTCTCAGTGCCCATGGCCATC...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCGGGTGCGAGGAGCAGTaGGGCGCCCAGGTTGACGTG | + |
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Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATAGCEEQ*GAQVDV Trigger: CACGTCAACCTGGGCGCCGCACTGCTCCTCGCACCC...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTGCTGCCCAGGGCTCTaGGCGTCCCGTCTTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATACCPGL*ASRLPL Trigger: GAGGGGAAGACGGGACGCCCAGAGCCCTGGGCAGCA...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGCTGACAAGGAGAGGGTaGTGGGGAGCCTCGGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGLTRRG*WGASGS Trigger: CGACCCCGAGGCTCCCCACCACCCTCTCCTTGTCAG...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR TCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGGGCAGCACAGGAAGCTaGGTAGCATCAGGGCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGGSTGS*VASGLR Trigger: ACGGAGCCCTGATGCTACTCAGCTTCCTGTGCTGCC...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR TCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCGATGGCCATGGGCACTaGGAGCAGGGGCAGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPDGHGH*EQGQAS Trigger: GCTGGCCTGCCCCTGCTCTCAGTGCCCATGGCCATC...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCCCACAGCCCAGGTGCTaGCCAGGGCTCTGGGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSPQPRC*PGLWAS Trigger: GGACGCCCAGAGCCCTGGGCAGCACCTGGGCTGTGG...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCGTACCACAGCCCAGGTaGTGCCCAGGGCTCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPVPQPR*CPGLWA Trigger: CGCCCAGAGCCCTGGGCAGCACCTGGGCTGTGGTAC...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCTCCTCCCAGCGCAGCTaGGGCAGCCTCTGGAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPSSQRS*GSLWSV Trigger: CACGCTCCAGAGGCTGCCCCAGCTGCGCTGGGAGGA...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079423.7 |
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| CDS-3UTR TCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGCGTGGTGGAGCACCATaGGGAACTCCTTGTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGRGGAP*GTPCAG Trigger: ACCTGCACAAGGAGTTCCTCATGGTGCTCCACCACG...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR TCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGTTGTCGCCACACCACTaGGAGTGGGAAGCACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGLSPHH*EWEAHQ Trigger: CTGGTGTGCTTCCCACTCTCAGTGGTGTGGCGACAA...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR TCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCGGCAGCACAGGAAGCTaGGTAGCATCAGGGCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATAGSTGS*VASGLR Trigger: ACGGAGCCCTGATGCTACTCAGCTTCCTGTGCTGCC...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGCCGTCTTCCCCTCCGTaGCCTTTAACCTGGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGPSSPP*PLTWCL Trigger: CAAGCACCAGGTTAAAGGGCACGGAGGGGAAGACGG...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCGTACCACAGCCCAGGTaGTGCCCAGGGCTCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSVPQPR*CPGLWA Trigger: CGCCCAGAGCCCTGGGCAGCACCTGGGCTGTGGTAC...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCGGGTGCGAGGAGCAGTaGGGCGCCCAGGTTGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSGCEEQ*GAQVDV Trigger: CACGTCAACCTGGGCGCCGCACTGCTCCTCGCACCC...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCGGCGGAGACAATGACTaGGTCGGCCTCCTCCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPGGDND*VGLLPA Trigger: CGCTGGGAGGAGGCCGACGCAGTCATTGTCTCCGCC...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079423.7 |
||
| CDS-3UTR CCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCACCATGGCCGCGTGGTaGAGCACCATGAGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATATMAAW*STMRNS Trigger: GGAGTTCCTCATGGTGCTCCACCACGCGGCCATGGT...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR CCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCAGCACACCAGTACCATaGCCGCGTGGTGGAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATASTPVP*PRGGAP Trigger: TGGTGCTCCACCACGCGGCCATGGTACTGGTGTGCT...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR TCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCCAGCTGTGGAGGCCATaGTGGCTTGGACAGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATAQLWRP*WLGQRT Trigger: TGTCCTCTGTCCAAGCCATCATGGCCTCCACAGCTG...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 |
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| CDS-3UTR TCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTGTCGCCACACCACTaGGAGTGGGAAGCACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATALSPHH*EWEAHQ Trigger: CTGGTGTGCTTCCCACTCTCAGTGGTGTGGCGACAA...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR TCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGAGACGAAAGGAGTGCTaGCCTCGGCCATCAACATGC | + |
|
Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGRRKEC*PRPSTC Trigger: GCATGTTGATGGCCGAGGTCAGCACTCCTTTCGTCT...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCAGTGCGGCGCCCAGGTTaGCGTGGGCCGGGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSVRRPG*RGPGWP Trigger: TGGCCATCCCGGCCCACGTCAACCTGGGCGCCGCAC...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR TCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCAGGCCCCGCGGCAAATaGGGAAGAACCAGTAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATARPRGK*GRTSRA Trigger: AGCTCTACTGGTTCTTCCTCATTTGCCGCGGGGCCT...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGTGCCCTTTAACCTGGTaGTTGTGCCAGTGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGCPLTW*LCQWQR Trigger: CCTCTGCCACTGGCACAAGCACCAGGTTAAAGGGCA...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR CCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCCCGTGCCCTTTAACCTaGTGCTTGTGCCAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATAPCPLT*CLCQWQ Trigger: CTGCCACTGGCACAAGCACCAGGTTAAAGGGCACGG...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCAGTACCATGGCCGCGTaGTGGAGCACCATGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATASTMAA*WSTMRN Trigger: GTTCCTCATGGTGCTCCACCACGCGGCCATGGTACT...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCACAAGGAGAGGGTGGTaGGGAGCCTCGGGGTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPTRRGW*GASGSE Trigger: TTCCGACCCCGAGGCTCCCCACCACCCTCTCCTTGT...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCCTGACAAGGAGAGGGTaGTGGGGAGCCTCGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSLTRRG*WGASGS Trigger: CGACCCCGAGGCTCCCCACCACCCTCTCCTTGTCAG...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR TCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGTGCTGCTGCTTGTACTaGATGAGGATCTTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGCCCLY*MRILPR Trigger: CCTGGGCAAGATCCTCATTCAGTACAAGCAGCAGCA...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGACCAAGACAGCCTCTTaGCTCTCCATCCGTAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGTKTAS*LSIRKL Trigger: CAGCTTACGGATGGAGAGGCAAGAGGCTGTCTTGGT...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098032.11 ENSMUST00000205324.2 |
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| CDS-3UTR GCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTGCCCTTTAACCTGGTaGTTGTGCCAGTGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATACPLTW*LCQWQR Trigger: CCTCTGCCACTGGCACAAGCACCAGGTTAAAGGGCA...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCACCACAGCCCAGGTGCTaGCCAGGGCTCTGGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSPQPRC*PGLWAS Trigger: GGACGCCCAGAGCCCTGGGCAGCACCTGGGCTGTGG...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGCAGAGGACACCAACTTaGATGCCACCAAGACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGQRTPT*MPPRQP Trigger: AGGCTGTCTTGGTGGCATCCAAGTTGGTGTCCTCTG...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098032.11 ENSMUST00000205324.2 |
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| CDS-3UTR CCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCACCATGGCCGCGTGGTaGAGCACCATGAGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPTMAAW*STMRNS Trigger: GGAGTTCCTCATGGTGCTCCACCACGCGGCCATGGT...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCAGCGCCCAGGTTGACGTaGGCCGGGATGGCCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSAPRLT*AGMAMG Trigger: GCCCATGGCCATCCCGGCCCACGTCAACCTGGGCGC...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCACAAGGAGAGGGTGGTaGGGAGCCTCGGGGTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSTRRGW*GASGSE Trigger: TTCCGACCCCGAGGCTCCCCACCACCCTCTCCTTGT...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR TCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCCAGCTGTGGAGGCCATaGTGGCTTGGACAGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPQLWRP*WLGQRT Trigger: TGTCCTCTGTCCAAGCCATCATGGCCTCCACAGCTG...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 |
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| CDS-3UTR TCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCCGTGGTGGAGCACCATaGGGAACTCCTTGTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPRGGAP*GTPCAG Trigger: ACCTGCACAAGGAGTTCCTCATGGTGCTCCACCACG...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR TCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTGCTGCTGCTTGTACTaGATGAGGATCTTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATACCCLY*MRILPR Trigger: CCTGGGCAAGATCCTCATTCAGTACAAGCAGCAGCA...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR TCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCAGATGGCCATGGGCACTaGGAGCAGGGGCAGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSDGHGH*EQGQAS Trigger: GCTGGCCTGCCCCTGCTCTCAGTGCCCATGGCCATC...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR TCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCAGGCCCCGCGGCAAATaGGGAAGAACCAGTAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPRPRGK*GRTSRA Trigger: AGCTCTACTGGTTCTTCCTCATTTGCCGCGGGGCCT...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCAGTACCACAGCCCAGGTaGTGCCCAGGGCTCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSVPQPR*CPGLWA Trigger: CGCCCAGAGCCCTGGGCAGCACCTGGGCTGTGGTAC...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCAGGGTGCGAGGAGCAGTaGGGCGCCCAGGTTGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSGCEEQ*GAQVDV Trigger: CACGTCAACCTGGGCGCCGCACTGCTCCTCGCACCC...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGTGTGCTTGCAGGAAGTaGAGACTATGTAGCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGCACRK*RLCSQL Trigger: CAGCTGGCTACATAGTCTCCACTTCCTGCAAGCACA...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCCCGTGCCCTTTAACCTaGTGCTTGTGCCAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPPCPLT*CLCQWQ Trigger: CTGCCACTGGCACAAGCACCAGGTTAAAGGGCACGG...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCACCATGGCCGCGTGGTaGAGCACCATGAGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSTMAAW*STMRNS Trigger: GGAGTTCCTCATGGTGCTCCACCACGCGGCCATGGT...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCAGTACCATGGCCGCGTaGTGGAGCACCATGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPSTMAA*WSTMRN Trigger: GTTCCTCATGGTGCTCCACCACGCGGCCATGGTACT...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCAGCTGGGGCAGCCTCTaGAGCGTGTTCTTGGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPSWGSL*SVFLDR Trigger: CCTATCCAAGAACACGCTCCAGAGGCTGCCCCAGCT...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000079423.7 |
||
| CDS-3UTR TCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCAGTGCTGGTCATCTATaGTGTGCTTGCAGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATASAGHL*CACRKW Trigger: CCACTTCCTGCAAGCACATCATAGATGACCAGCACT...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCCGTGGTGGAGCACCATaGGGAACTCCTTGTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSRGGAP*GTPCAG Trigger: ACCTGCACAAGGAGTTCCTCATGGTGCTCCACCACG...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCTTGTCGCCACACCACTaGGAGTGGGAAGCACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSLSPHH*EWEAHQ Trigger: CTGGTGTGCTTCCCACTCTCAGTGGTGTGGCGACAA...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR TCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCAACCTGGCGGAGACAATaGCTGCGTCGGCCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSTWRRQ*LRRPPP Trigger: GGGAGGAGGCCGACGCAGTCATTGTCTCCGCCAGGT...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079423.7 |
||
| CDS-3UTR GCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCCCGTCTTCCCCTCCGTaGCCTTTAACCTGGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSPSSPP*PLTWCL Trigger: CAAGCACCAGGTTAAAGGGCACGGAGGGGAAGACGG...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCGAAAGAAATCTCCCTTaGCTTGTCGCCACACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATAERNLP*LVATPL Trigger: CAGTGGTGTGGCGACAAGGCAAGGGAGATTTCTTTC...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | GTCTCCACAGGAAGGGGCTGTGGGGGTAACTGCCCTGTCAGGGCCCAGGTGGGGCCTCGGCCATCAACATaGAGCCTAGAAAGAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTGRGCGGNCPVRAQVGPRPST*SLERNL Trigger: GAGATTTCTTTCTAGGCTGCATGTTGATGGCCGAGG...CCCCACCTGGGCCCTGACAGGGCAGTTACCCCCACAGCCCCTTCCTGTGGAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTACCACAAAGCACAGTaGGAAGAAGACACACCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATAYHKAQ*EEDTPQ Trigger: CTGGGGTGTGTCTTCTTCCCACTGTGCTTTGTGGTA...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098032.11 ENSMUST00000205324.2 |
||
| CDS-3UTR CCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTGTGCTTGCAGGAAGTaGAGACTATGTAGCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATACACRK*RLCSQL Trigger: CAGCTGGCTACATAGTCTCCACTTCCTGCAAGCACA...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCCCGTGCCCTTTAACCTaGTGCTTGTGCCAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSPCPLT*CLCQWQ Trigger: CTGCCACTGGCACAAGCACCAGGTTAAAGGGCACGG...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCGAGGCCATGATGGCTTaGACAGAGGACACCAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPEAMMA*TEDTNL Trigger: CAGGTTGGTGTCCTCTGTCCAAGCCATCATGGCCTC...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079423.7 |
||
| CDS-3UTR TCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCAGACGAAAGGAGTGCTaGCCTCGGCCATCAACATGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSRRKEC*PRPSTC Trigger: GCATGTTGATGGCCGAGGTCAGCACTCCTTTCGTCT...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCTGCTGCTGCTTGTACTaGATGAGGATCTTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPCCCLY*MRILPR Trigger: CCTGGGCAAGATCCTCATTCAGTACAAGCAGCAGCA...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCTGCCCTTTAACCTGGTaGTTGTGCCAGTGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSCPLTW*LCQWQR Trigger: CCTCTGCCACTGGCACAAGCACCAGGTTAAAGGGCA...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCCAGAGGACACCAACTTaGATGCCACCAAGACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPQRTPT*MPPRQP Trigger: AGGCTGTCTTGGTGGCATCCAAGTTGGTGTCCTCTG...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098032.11 ENSMUST00000205324.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCAACAAGGAGAGGGTGGTaGGGAGCCTCGGGGTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSTRRGW*GASGSE Trigger: TTCCGACCCCGAGGCTCCCCACCACCCTCTCCTTGT...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCTCTGGAGCGTGTTCTTaGATAGGAGGAAGAGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPSGACS*IGGRVR Trigger: CCGGACTCTTCCTCCTATCCAAGAACACGCTCCAGA...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079423.7 |
||
| CDS-3UTR GCA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTGGTCATCTATGATGTaGTTGCAGGAAGTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: APVPRAAQRWKGCRGATAWSSMM*LQEVET Trigger: AGTCTCCACTTCCTGCAAGCACATCATAGATGACCA...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCAACCATGGCCGCGTGGTaGAGCACCATGAGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSTMAAW*STMRNS Trigger: GGAGTTCCTCATGGTGCTCCACCACGCGGCCATGGT...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCAAGCACACCAGTACCATaGCCGCGTGGTGGAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSSTPVP*PRGGAP Trigger: TGGTGCTCCACCACGCGGCCATGGTACTGGTGTGCT...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR TCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCACAGCTGTGGAGGCCATaGTGGCTTGGACAGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSQLWRP*WLGQRT Trigger: TGTCCTCTGTCCAAGCCATCATGGCCTCCACAGCTG...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 |
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| CDS-3UTR TCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCACGTGGTGGAGCACCATaGGGAACTCCTTGTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSRGGAP*GTPCAG Trigger: ACCTGCACAAGGAGTTCCTCATGGTGCTCCACCACG...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR TCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCAAGGCCCCGCGGCAAATaGGGAAGAACCAGTAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSRPRGK*GRTSRA Trigger: AGCTCTACTGGTTCTTCCTCATTTGCCGCGGGGCCT...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCACCGTCTTCCCCTCCGTaGCCTTTAACCTGGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSPSSPP*PLTWCL Trigger: CAAGCACCAGGTTAAAGGGCACGGAGGGGAAGACGG...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCGAAAGAAATCTCCCTTaGCTTGTCGCCACACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSERNLP*LVATPL Trigger: CAGTGGTGTGGCGACAAGGCAAGGGAGATTTCTTTC...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCTGTGCTTGCAGGAAGTaGAGACTATGTAGCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSCACRK*RLCSQL Trigger: CAGCTGGCTACATAGTCTCCACTTCCTGCAAGCACA...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCAAGTACCATGGCCGCGTaGTGGAGCACCATGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSSTMAA*WSTMRN Trigger: GTTCCTCATGGTGCTCCACCACGCGGCCATGGTACT...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCTGGTCATCTATGATGTaGTTGCAGGAAGTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPWSSMM*LQEVET Trigger: AGTCTCCACTTCCTGCAAGCACATCATAGATGACCA...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCCCTCGGCCATCAACATaGAGCCTAGAAAGAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSPRPST*SLERNL Trigger: GAGATTTCTTTCTAGGCTGCATGTTGATGGCCGAGG...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR TCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCATGCTGCTGCTTGTACTaGATGAGGATCTTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSCCCLY*MRILPR Trigger: CCTGGGCAAGATCCTCATTCAGTACAAGCAGCAGCA...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR GCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCAACCAAGACAGCCTCTTaGCTCTCCATCCGTAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSTKTAS*LSIRKL Trigger: CAGCTTACGGATGGAGAGGCAAGAGGCTGTCTTGGT...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098032.11 ENSMUST00000205324.2 |
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| CDS-3UTR GCA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCTGGTCATCTATGATGTaGTTGCAGGAAGTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LPGDGEQRRICSSRARMSWSSMM*LQEVET Trigger: AGTCTCCACTTCCTGCAAGCACATCATAGATGACCA...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCAGAGGCCATGATGGCTTaGACAGAGGACACCAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSEAMMA*TEDTNL Trigger: CAAGTTGGTGTCCTCTGTCCAAGCCATCATGGCCTC...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098032.11 ENSMUST00000205324.2 |
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| CDS-3UTR TCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCAAGTGCTGGTCATCTATaGTGTGCTTGCAGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSSAGHL*CACRKW Trigger: CCACTTCCTGCAAGCACATCATAGATGACCAGCACT...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCATACCACAAAGCACAGTaGGAAGAAGACACACCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSYHKAQ*EEDTPQ Trigger: CTGGGGTGTGTCTTCTTCCCACTGTGCTTTGTGGTA...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098032.11 ENSMUST00000205324.2 |
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| CDS-3UTR GCA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCACCTCGGCCATCAACATaGAGCCTAGAAAGAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: MSLDSLVQVSPISSLPLSPRPST*SLERNL Trigger: GAGATTTCTTTCTAGGCTGCATGTTGATGGCCGAGG...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS TCA 90 bp | CAGTGCGGCGCCCAGGTTGACGTGGGCCGGGATGGCCATGGGCACTaGGAGCAGGGGCAGGCCAGCGTGGCGCCCGTAGGCCCAGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: QCGAQVDVGRDGHGH*EQGQASVAPVGPVQ Trigger: CTGTACTGGGCCTACGGGCGCCACGCTGGCCTGCCCCTGCTCTCAGTGCCCATGGCCATCCCGGCCCACGTCAACCTGGGCGCCGCACTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS TCA 90 bp | AGAACCAGTAGAGCTGGGGTGCGAGGAGCAGTGCGGCGCCCAGGTTaGCGTGGGCCGGGATGGCCATGGGCACTGAGAGCAGGGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RTSRAGVRGAVRRPG*RGPGWPWALRAGAG Trigger: GCCTGCCCCTGCTCTCAGTGCCCATGGCCATCCCGGCCCACGTCAACCTGGGCGCCGCACTGCTCCTCGCACCCCAGCTCTACTGGTTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS GCA 90 bp | GCCCAGGTGCTGCCCAGGGCTCTGGGCGTCCCGTCTTCCCCTCCGTaGCCTTTAACCTGGTGCTTGTGCCAGTGGCAGAGGAACATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AQVLPRALGVPSSPP*PLTWCLCQWQRNMA Trigger: TGCCATGTTCCTCTGCCACTGGCACAAGCACCAGGTTAAAGGGCACGGAGGGGAAGACGGGACGCCCAGAGCCCTGGGCAGCACCTGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
||
| CDS CCA 90 bp | AACCTGGCGGAGACAATGACTGCGTCGGCCTCCTCCCAGCGCAGCTaGGGCAGCCTCTGGAGCGTGTTCTTGGATAGGAGGAAGAGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: NLAETMTASASSQRS*GSLWSVFLDRRKSP Trigger: CGGACTCTTCCTCCTATCCAAGAACACGCTCCAGAGGCTGCCCCAGCTGCGCTGGGAGGAGGCCGACGCAGTCATTGTCTCCGCCAGGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079423.7 |
||
| CDS-3UTR CAA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCGGAGGCCATGATGGCTaGGACAGAGGACACCAACCT | + |
|
Preference number: 5 (lower is better) Translates to: APVPRAAQRWKGCRGATAGGHDG*DRGHQP Trigger: AGGTTGGTGTCCTCTGTCCAAGCCATCATGGCCTCC...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079423.7 |
||
| CDS TCA 90 bp | AGAGTGGGAAGCACACCAGTACCATGGCCGCGTGGTGGAGCACCATaGGGAACTCCTTGTGCAGGTAGCCGCGTACCACAGCCCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RVGSTPVPWPRGGAP*GTPCAGSRVPQPRC Trigger: GCACCTGGGCTGTGGTACGCGGCTACCTGCACAAGGAGTTCCTCATGGTGCTCCACCACGCGGCCATGGTACTGGTGTGCTTCCCACTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CAA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCGGAGGCCATGATGGCTaGGACAGAGGACACCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: APVPRAAQRWKGCRGATAGGHDG*DRGHQL Trigger: AAGTTGGTGTCCTCTGTCCAAGCCATCATGGCCTCC...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098032.11 ENSMUST00000205324.2 |
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| CDS-3UTR CAA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCCCTTTAACCTGGTGCTaGTGCCAGTGGCAGAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: APVPRAAQRWKGCRGATAPLTWC*CQWQRN Trigger: GTTCCTCTGCCACTGGCACAAGCACCAGGTTAAAGG...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS TCA 90 bp | CCCAGTACAGGTAGGGGAAGAGCAGCACCCGGCAGCACAGGAAGCTaGGTAGCATCAGGGCTCCGTTCACCTTGTGCAGCAACGTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: PSTGRGRAAPGSTGS*VASGLRSPCAATCA Trigger: AGCACACGTTGCTGCACAAGGTGAACGGAGCCCTGATGCTACTCAGCTTCCTGTGCTGCCGGGTGCTGCTCTTCCCCTACCTGTACTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CAA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCAGAAAGAAATCTCCCTaGCCTTGTCGCCACACCACT | + |
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Preference number: 5 (lower is better) Translates to: APVPRAAQRWKGCRGATARKKSP*PCRHTT Trigger: AGTGGTGTGGCGACAAGGCAAGGGAGATTTCTTTCT...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CAA 90 bp | CTCCCGGGTGATGGGGAGCAGAGAAGGATTTGCAGCAGCAGGGCTAGGATGTCCCTCTGGAGCGTGTTCTaGGATAGGAGGAAGAGTCCG | + |
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Preference number: 5 (lower is better) Translates to: LPGDGEQRRICSSRARMSLWSVF*DRRKSP Trigger: CGGACTCTTCCTCCTATCCAAGAACACGCTCCAGAG...GGACATCCTAGCCCTGCTGCTGCAAATCCTTCTCTGCTCCCCATCACCCGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079423.7 |
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| CDS GCA 90 bp | GCTTGGACAGAGGACACCAACTTGGATGCCACCAAGACAGCCTCTTaGCTCTCCATCCGTAAGCTGGTTCGATTCTGCAGCCCCCAGCGT | + |
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Preference number: 5 (lower is better) Translates to: AWTEDTNLDATKTAS*LSIRKLVRFCSPQR Trigger: ACGCTGGGGGCTGCAGAATCGAACCAGCTTACGGATGGAGAGGCAAGAGGCTGTCTTGGTGGCATCCAAGTTGGTGTCCTCTGTCCAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000205722.2 |
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| CDS-3UTR CAA 90 bp | GCGCCTGTCCCCAGGGCTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTCATCTATGATGTGCTaGCAGGAAGTGGAGACTATG | + |
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Preference number: 5 (lower is better) Translates to: APVPRAAQRWKGCRGATASSMMC*QEVETM Trigger: CATAGTCTCCACTTCCTGCAAGCACATCATAGATGA...GGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAGCCCTGGGGACAGGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CAA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCAGAAAGAAATCTCCCTaGCCTTGTCGCCACACCACT | + |
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Preference number: 5 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPRKKSP*PCRHTT Trigger: AGTGGTGTGGCGACAAGGCAAGGGAGATTTCTTTCT...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CAA 90 bp | CTGCTCAGCGCTGGAAAGGTTGTAGGGGAGCAACTGCCTTCCTCCCCTCACCCCTCATCTATGATGTGCTaGCAGGAAGTGGAGACTATG | + |
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Preference number: 5 (lower is better) Translates to: LLSAGKVVGEQLPSSPHPSSMMC*QEVETM Trigger: CATAGTCTCCACTTCCTGCAAGCACATCATAGATGA...GGGGTGAGGGGAGGAAGGCAGTTGCTCCCCTACAACCTTTCCAGCGCTGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS CCA 90 bp | ACTTGGATGCCACCAAGACAGCCTCTTGCCTCTCCATCCGTAAGCTaGTTCGATTCTGCAGCCCCCAGCGTAATACCACAAAGCACAGTG | + |
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Preference number: 5 (lower is better) Translates to: TWMPPRQPLASPSVS*FDSAAPSVIPQSTV Trigger: CACTGTGCTTTGTGGTATTACGCTGGGGGCTGCAGAATCGAACCAGCTTACGGATGGAGAGGCAAGAGGCTGTCTTGGTGGCATCCAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000205722.2 |
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| CDS GCA 90 bp | ACCAAGACAGCCTCTTGCCTCTCCATCCGTAAGCTGGTTCGATTCTaGAGCCCCCAGCGTAATACCACAAAGCACAGTGGGAAGAAGACA | + |
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Preference number: 5 (lower is better) Translates to: TKTASCLSIRKLVRF*SPQRNTTKHSGKKT Trigger: TGTCTTCTTCCCACTGTGCTTTGTGGTATTACGCTGGGGGCTGCAGAATCGAACCAGCTTACGGATGGAGAGGCAAGAGGCTGTCTTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000205722.2 |
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| CDS-3UTR CAA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCAAGAAAGAAATCTCCCTaGCCTTGTCGCCACACCACT | + |
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Preference number: 5 (lower is better) Translates to: MSLDSLVQVSPISSLPLSRKKSP*PCRHTT Trigger: AGTGGTGTGGCGACAAGGCAAGGGAGATTTCTTTCT...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS TCA 90 bp | GGTGCTTGTGCCAGTGGCAGAGGAACATGGCATAGATGTCATAGATaGAGTAGGGAACTGCAAACTGTGTATAGGCCGAGGACAGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: GACASGRGTWHRCHR*SRELQTVYRPRTAS Trigger: ACTGGCTGTCCTCGGCCTATACACAGTTTGCAGTTCCCTACTTCATCTATGACATCTATGCCATGTTCCTCTGCCACTGGCACAAGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS-3UTR CAA 90 bp | ATGTCCCTTGACTCCTTGGTCCAAGTGAGCCCCATCTCCTCCCTTCCCCTTTCATCATCTATGATGTGCTaGCAGGAAGTGGAGACTATG | + |
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Preference number: 5 (lower is better) Translates to: MSLDSLVQVSPISSLPLSSSMMC*QEVETM Trigger: CATAGTCTCCACTTCCTGCAAGCACATCATAGATGA...TGAAAGGGGAAGGGAGGAGATGGGGCTCACTTGGACCAAGGAGTCAAGGGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS GCA 90 bp | GTGGCAGAGGAACATGGCATAGATGTCATAGATGAAGTAGGGAACTaGAAACTGTGTATAGGCCGAGGACAGCCAGTGCTGGTCATCTAT | + |
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Preference number: 5 (lower is better) Translates to: VAEEHGIDVIDEVGN*KLCIGRGQPVLVIY Trigger: ATAGATGACCAGCACTGGCTGTCCTCGGCCTATACACAGTTTGCAGTTCCCTACTTCATCTATGACATCTATGCCATGTTCCTCTGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS CCA 72 bp | TGGGGTGCGAGGAGCAGTGCGGCGCCCAGGTTGACGTaGGCCGGGATGGCCATGGGCACTGAGAGCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: WGARSSAAPRLT*AGMAMGTESRG Trigger: GCCCCTGCTCTCAGTGCCCATGGCCATCCCGGCCCACGTCAACCTGGGCGCCGCACTGCTCCTCGCACCCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS TCA 72 bp | AGAGCTGGGGTGCGAGGAGCAGTGCGGCGCCCAGGTTaGCGTGGGCCGGGATGGCCATGGGCACTGAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: RAGVRGAVRRPG*RGPGWPWALRA Trigger: TGCTCTCAGTGCCCATGGCCATCCCGGCCCACGTCAACCTGGGCGCCGCACTGCTCCTCGCACCCCAGCTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS GCA 72 bp | ACTCCTTGTGCAGGTAGCCGCGTACCACAGCCCAGGTaGTGCCCAGGGCTCTGGGCGTCCCGTCTTCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: TPCAGSRVPQPR*CPGLWASRLPL Trigger: GAGGGGAAGACGGGACGCCCAGAGCCCTGGGCAGCACCTGGGCTGTGGTACGCGGCTACCTGCACAAGGAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS GCA 72 bp | CTGCCCAGGGCTCTGGGCGTCCCGTCTTCCCCTCCGTaGCCTTTAACCTGGTGCTTGTGCCAGTGGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LPRALGVPSSPP*PLTWCLCQWQR Trigger: CCTCTGCCACTGGCACAAGCACCAGGTTAAAGGGCACGGAGGGGAAGACGGGACGCCCAGAGCCCTGGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS GCA 72 bp | GAGGAAGAACCAGTAGAGCTGGGGTGCGAGGAGCAGTaGGGCGCCCAGGTTGACGTGGGCCGGGATGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: EEEPVELGCEEQ*GAQVDVGRDGH Trigger: ATGGCCATCCCGGCCCACGTCAACCTGGGCGCCGCACTGCTCCTCGCACCCCAGCTCTACTGGTTCTTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS TCA 72 bp | AGCACACCAGTACCATGGCCGCGTGGTGGAGCACCATaGGGAACTCCTTGTGCAGGTAGCCGCGTACCACAG | + |
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Preference number: 6 (lower is better) Translates to: STPVPWPRGGAP*GTPCAGSRVPQ Trigger: CTGTGGTACGCGGCTACCTGCACAAGGAGTTCCTCATGGTGCTCCACCACGCGGCCATGGTACTGGTGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS CAA 72 bp | GGAGACTATGTAGCCAGCTGTGGAGGCCATGATGGCTaGGACAGAGGACACCAACCTGGCGGAGACAATGAC | + |
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Preference number: 6 (lower is better) Translates to: GDYVASCGGHDG*DRGHQPGGDND Trigger: GTCATTGTCTCCGCCAGGTTGGTGTCCTCTGTCCAAGCCATCATGGCCTCCACAGCTGGCTACATAGTCTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079423.7 |
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| CDS GCA 72 bp | GAGGACACCAACTTGGATGCCACCAAGACAGCCTCTTaGCTCTCCATCCGTAAGCTGGTTCGATTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: EDTNLDATKTAS*LSIRKLVRFCS Trigger: GCTGCAGAATCGAACCAGCTTACGGATGGAGAGGCAAGAGGCTGTCTTGGTGGCATCCAAGTTGGTGTCCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000205722.2 |
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| CDS CCA 72 bp | CCACCAAGACAGCCTCTTGCCTCTCCATCCGTAAGCTaGTTCGATTCTGCAGCCCCCAGCGTAATACCACAA | + |
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Preference number: 6 (lower is better) Translates to: PPRQPLASPSVS*FDSAAPSVIPQ Trigger: TTGTGGTATTACGCTGGGGGCTGCAGAATCGAACCAGCTTACGGATGGAGAGGCAAGAGGCTGTCTTGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000205722.2 |
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| CDS CAA 72 bp | GGAGACTATGTAGCCAGCTGTGGAGGCCATGATGGCTaGGACAGAGGACACCAACTTGGATGCCACCAAGAC | + |
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Preference number: 6 (lower is better) Translates to: GDYVASCGGHDG*DRGHQLGCHQD Trigger: GTCTTGGTGGCATCCAAGTTGGTGTCCTCTGTCCAAGCCATCATGGCCTCCACAGCTGGCTACATAGTCTCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000205722.2 |
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| CDS GCA 72 bp | CGGCCATCAACATGCAGCCTAGAAAGAAATCTCCCTTaGCTTGTCGCCACACCACTGAGAGTGGGAAGCACA | + |
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Preference number: 6 (lower is better) Translates to: RPSTCSLERNLP*LVATPLRVGST Trigger: TGTGCTTCCCACTCTCAGTGGTGTGGCGACAAGGCAAGGGAGATTTCTTTCTAGGCTGCATGTTGATGGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS CAA 72 bp | TCGGCCATCAACATGCAGCCTAGAAAGAAATCTCCCTaGCCTTGTCGCCACACCACTGAGAGTGGGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: SAINMQPRKKSP*PCRHTTESGKH Trigger: GTGCTTCCCACTCTCAGTGGTGTGGCGACAAGGCAAGGGAGATTTCTTTCTAGGCTGCATGTTGATGGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000207020.2 |
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| CDS TCA 72 bp | GTGTATAGGCCGAGGACAGCCAGTGCTGGTCATCTATaGTGTGCTTGCAGGAAGTGGAGACTATGTAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: VYRPRTASAGHL*CACRKWRLCSQ Trigger: CTGGCTACATAGTCTCCACTTCCTGCAAGCACATCATAGATGACCAGCACTGGCTGTCCTCGGCCTATACAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079423.7 ENSMUST00000098032.11 ENSMUST00000205324.2 ENSMUST00000205722.2 ENSMUST00000207020.2 |
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