Pregenerated sensors for TLCD3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069808Ensembl transcript IDs: ENSMUST00000094014.10, ENSMUST00000129853.8, ENSMUST00000169560.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGTTGCCGGGTGTTGCCCTGAGTGGGTGGGAAGGGGAGAACAGTaGTTCACCTCCCAAAACTCTTTCCCAGGCCCAAGGAAGGCTCCT | + |
|
Preference number: 1 (lower is better) Translates to: GVAGCCPEWVGRGEQ*FTSQNSFPGPRKAP Trigger: AGGAGCCTTCCTTGGGCCTGGGAAAGAGTTTTGGGAGGTGAAGCACTGTTCTCCCCTTCCCACCCACTCAGGGCAACACCCGGCAACACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CCA 90 bp | GCTTCTGACCCAGTATGGGTGTTGCCGGGTGTTGCCCTGAGTGGGTaGGAAGGGGAGAACAGTGCTTCACCTCCCAAAACTCTTTCCCAG | + |
|
Preference number: 1 (lower is better) Translates to: ASDPVWVLPGVALSG*EGENSASPPKTLSQ Trigger: CTGGGAAAGAGTTTTGGGAGGTGAAGCACTGTTCTCCCCTTCCCACCCACTCAGGGCAACACCCGGCAACACCCATACTGGGTCAGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR TCA 90 bp | TGTCACTTGCTTCTGACCCAGTATGGGTGTTGCCGGGTGTTGCCCTaGGTGGGTGGGAAGGGGAGAACAGTGCTTCACCTCCCAAAACTC | + |
|
Preference number: 1 (lower is better) Translates to: CHLLLTQYGCCRVLP*VGGKGRTVLHLPKL Trigger: GAGTTTTGGGAGGTGAAGCACTGTTCTCCCCTTCCCACCCACTCAGGGCAACACCCGGCAACACCCATACTGGGTCAGAAGCAAGTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CCA 90 bp | TCTGTGCTACACCACATGCTACAGCACACAGCTAACAAACAGCACTaGTCCACAGGACATGCTCTGGCTCGTCTGGCTTCTCTCTCCTGT | + |
|
Preference number: 1 (lower is better) Translates to: SVLHHMLQHTANKQH*STGHALARLASLSC Trigger: ACAGGAGAGAGAAGCCAGACGAGCCAGAGCATGTCCTGTGGACCAGTGCTGTTTGTTAGCTGTGTGCTGTAGCATGTGGTGTAGCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR GCA 90 bp | TCTCAACCCCAGCCTGTGGTGAGAGATGATCTGTGCTACACCACATaGTACAGCACACAGCTAACAAACAGCACTGGTCCACAGGACATG | + |
|
Preference number: 1 (lower is better) Translates to: SQPQPVVRDDLCYTT*YSTQLTNSTGPQDM Trigger: CATGTCCTGTGGACCAGTGCTGTTTGTTAGCTGTGTGCTGTAGCATGTGGTGTAGCACAGATCATCTCTCACCACAGGCTGGGGTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CCA 90 bp | TACAGCACACAGCTAACAAACAGCACTGGTCCACAGGACATGCTCTaGCTCGTCTGGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: YSTQLTNSTGPQDML*LVWLLSPVFKLSVA Trigger: AGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCCAGACGAGCCAGAGCATGTCCTGTGGACCAGTGCTGTTTGTTAGCTGTGTGCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CCA 90 bp | CAGCTAACAAACAGCACTGGTCCACAGGACATGCTCTGGCTCGTCTaGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTGGCTAGAACATTC | + |
|
Preference number: 1 (lower is better) Translates to: QLTNSTGPQDMLWLV*LLSPVFKLSVARTF Trigger: GAATGTTCTAGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCCAGACGAGCCAGAGCATGTCCTGTGGACCAGTGCTGTTTGTTAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR GCA 90 bp | ATTTTGTATGAAAGGGCAGTGTCAGTGTGGGATTACCCAGTAAGCTaGTATAGAAGCCATCACTCCACCTTGTCCCTGGAGTTTCAGGCC | + |
|
Preference number: 1 (lower is better) Translates to: ILYERAVSVWDYPVS*YRSHHSTLSLEFQA Trigger: GGCCTGAAACTCCAGGGACAAGGTGGAGTGATGGCTTCTATAGCAGCTTACTGGGTAATCCCACACTGACACTGCCCTTTCATACAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CCA 90 bp | GAGCAGACGTCTGTGTCCATTTTGTATGAAAGGGCAGTGTCAGTGTaGGATTACCCAGTAAGCTGCTATAGAAGCCATCACTCCACCTTG | + |
|
Preference number: 1 (lower is better) Translates to: EQTSVSILYERAVSV*DYPVSCYRSHHSTL Trigger: CAAGGTGGAGTGATGGCTTCTATAGCAGCTTACTGGGTAATCCCACACTGACACTGCCCTTTCATACAAAATGGACACAGACGTCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CCA 90 bp | CTCCTGTTTTCAAGCTTTCTGTGGCTAGAACATTCAACACAGAAATaGGTCTGTCTTAGCAGGAAGCACTGGCCTACAGGACACCTGGAG | + |
|
Preference number: 1 (lower is better) Translates to: LLFSSFLWLEHSTQK*VCLSRKHWPTGHLE Trigger: CTCCAGGTGTCCTGTAGGCCAGTGCTTCCTGCTAAGACAGACCCATTTCTGTGTTGAATGTTCTAGCCACAGAAAGCTTGAAAACAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CCA 90 bp | TGCTCTGGCTCGTCTGGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTaGCTAGAACATTCAACACAGAAATGGGTCTGTCTTAGCAGGAAG | + |
|
Preference number: 1 (lower is better) Translates to: CSGSSGFSLLFSSFL*LEHSTQKWVCLSRK Trigger: CTTCCTGCTAAGACAGACCCATTTCTGTGTTGAATGTTCTAGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCCAGACGAGCCAGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCCATCACTCCACCTTGTCCCTGGAGTTTCAGGCCAGTTTTTGGTGTGTGTGGTGCCGGGTGTTGCCCTaGGTGGGTGGGAAGGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SHHSTLSLEFQASFWCVWCRVLP*VGGKGR Trigger: TCTCCCCTTCCCACCCACTCAGGGCAACACCCGGCA...CCACACACACCAAAAACTGGCCTGAAACTCCAGGGACAAGGTGGAGTGATGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGCCTCTGCTGGCCTCCTGACCTACTCAAGTGCTTCAGGTTCTCAGCCCTGCCTGCCCATTGTCAGTaGGCCCTTCTGACTAGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: AGLCWPPDLLKCFRFSALPAHCQ*ALLTRS Trigger: ACTTCTAGTCAGAAGGGCTCACTGACAATGGGCAGG...CAGGGCTGAGAACCTGAAGCACTTGAGTAGGTCAGGAGGCCAGCAGAGGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR TCA 90 bp | AACAAACAGCACTGGTCCACAGGACATGCTCTGGCTCGTCTGGCTTCTCTCTCCCCTCTGCTGGCCTCCTaGCCTACTCAAGTGCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: NKQHWSTGHALARLASLSPLLAS*PTQVLQ Trigger: CTGAAGCACTTGAGTAGGTCAGGAGGCCAGCAGAGG...GGAGAGAGAAGCCAGACGAGCCAGAGCATGTCCTGTGGACCAGTGCTGTTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR CCA 90 bp | AACAAACAGCACTGGTCCACAGGACATGCTCTGGCTCGTCTGGCTTCTCTCTCCGTTGCCCTGAGTGGGTaGGAAGGGGAGAACAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: NKQHWSTGHALARLASLSVALSG*EGENSA Trigger: AGCACTGTTCTCCCCTTCCCACCCACTCAGGGCAAC...GGAGAGAGAAGCCAGACGAGCCAGAGCATGTCCTGTGGACCAGTGCTGTTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAAACAGCACTGGTCCACAGGACATGCTCTGGCTCGTCTGGCTTCTCTCTCCAAAGATGCTGGCCTCTaGTGGCCTCCTGACCTACTC | + |
|
Preference number: 2 (lower is better) Translates to: NKQHWSTGHALARLASLSKDAGL*WPPDLL Trigger: GAGTAGGTCAGGAGGCCAGCAGAGGCCAGCATCTTT...GGAGAGAGAAGCCAGACGAGCCAGAGCATGTCCTGTGGACCAGTGCTGTTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CAA 90 bp | GTTTCAAGAACCAAGTTGTCACTTGCTTCTGACCCAGTATGGGTGTaGCCGGGTGTTGCCCTGAGTGGGTGGGAAGGGGAGAACAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: VSRTKLSLASDPVWV*PGVALSGWEGENSA Trigger: AGCACTGTTCTCCCCTTCCCACCCACTCAGGGCAACACCCGGCAACACCCATACTGGGTCAGAAGCAAGTGACAACTTGGTTCTTGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTGGGAAGGGGAGAACAGTGCTTCACCTCCCAAAACTCTTTCCCAGGCCCAAGACTGCAGTGGGGCTTTaGCAGGATCCAAGTTATCAC | + |
|
Preference number: 2 (lower is better) Translates to: GGKGRTVLHLPKLFPRPKTAVGL*QDPSYH Trigger: GTGATAACTTGGATCCTGTCAAAGCCCCACTGCAGT...CTTGGGCCTGGGAAAGAGTTTTGGGAGGTGAAGCACTGTTCTCCCCTTCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CAA 90 bp | GCACTGGCCTACAGGACACCTGGAGAGCAGACGTCTGTGTCCATTTaGTATGAAAGGGCAGTGTCAGTGTGGGATTACCCAGTAAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: ALAYRTPGEQTSVSI*YERAVSVWDYPVSC Trigger: GCAGCTTACTGGGTAATCCCACACTGACACTGCCCTTTCATACAAAATGGACACAGACGTCTGCTCTCCAGGTGTCCTGTAGGCCAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTGGCTAGAACATTCAACACAGAAATGCCGGGTGTTGCCCTaGGTGGGTGGGAAGGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GFSLLFSSFLWLEHSTQKCRVLP*VGGKGR Trigger: TCTCCCCTTCCCACCCACTCAGGGCAACACCCGGCA...TTTCTGTGTTGAATGTTCTAGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CAA 90 bp | GTGTGGGATTACCCAGTAAGCTGCTATAGAAGCCATCACTCCACCTaGTCCCTGGAGTTTCAGGCCAGTTTTTGGTGTGTGTGGACACAG | + |
|
Preference number: 2 (lower is better) Translates to: VWDYPVSCYRSHHST*SLEFQASFWCVWTQ Trigger: CTGTGTCCACACACACCAAAAACTGGCCTGAAACTCCAGGGACAAGGTGGAGTGATGGCTTCTATAGCAGCTTACTGGGTAATCCCACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCTGGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTGGCTAGAACATTCAACACACTCAGCCCTGCCTCCTaGCCATTGTCAGTGAGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: VWLLSPVFKLSVARTFNTLSPAS*PLSVSP Trigger: AGGGCTCACTGACAATGGGCAGGAGGCAGGGCTGAG...TGTGTTGAATGTTCTAGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGGGTCTGTCTTAGCAGGAAGCACTGGCCTACAGGACACCTGGAGAGCAGACGTAAAACTACTGCAGTaGGGCTTTGACAGGATCCAA | + |
|
Preference number: 2 (lower is better) Translates to: NGSVLAGSTGLQDTWRADVKLLQ*GFDRIQ Trigger: TTGGATCCTGTCAAAGCCCCACTGCAGTAGTTTTAC...GTCTGCTCTCCAGGTGTCCTGTAGGCCAGTGCTTCCTGCTAAGACAGACCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAAACAGCACTGGTCCACAGGACATGCTCTGGCTCGTCTGGCTTCTCTCTCCAATGGTGTAGGTAACTaGTTTCAAGAAGCTCACAAG | + |
|
Preference number: 2 (lower is better) Translates to: NKQHWSTGHALARLASLSNGVGN*FQEAHK Trigger: CTTGTGAGCTTCTTGAAAGCAGTTACCTACACCATT...GGAGAGAGAAGCCAGACGAGCCAGAGCATGTCCTGTGGACCAGTGCTGTTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAACCAAGTTGTCACTTGCTTCTGACCCAGTATGGGTGTTGCCGGGTGTTGGTAAAACTACTGCAGTaGGGCTTTGACAGGATCCAA | + |
|
Preference number: 2 (lower is better) Translates to: QEPSCHLLLTQYGCCRVLVKLLQ*GFDRIQ Trigger: TTGGATCCTGTCAAAGCCCCACTGCAGTAGTTTTAC...CAACACCCGGCAACACCCATACTGGGTCAGAAGCAAGTGACAACTTGGTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTGGCTAGAACATTCAACACAGAAAGTTGCCCTGAGTGGGTaGGAAGGGGAGAACAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GFSLLFSSFLWLEHSTQKVALSG*EGENSA Trigger: AGCACTGTTCTCCCCTTCCCACCCACTCAGGGCAAC...TTTCTGTGTTGAATGTTCTAGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTGGCTAGAACATTCAACACAGAAAAAAGATGCTGGCCTCTaGTGGCCTCCTGACCTACTC | + |
|
Preference number: 2 (lower is better) Translates to: GFSLLFSSFLWLEHSTQKKDAGL*WPPDLL Trigger: GAGTAGGTCAGGAGGCCAGCAGAGGCCAGCATCTTT...TTTCTGTGTTGAATGTTCTAGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTCACAAGTTTGATACTGGTCTTTATACAAAGCCTGCAAAGATGCTGGCCTCTACTGCAGTGGGGCTTTaGCAGGATCCAAGTTATCAC | + |
|
Preference number: 2 (lower is better) Translates to: AHKFDTGLYTKPAKMLASTAVGL*QDPSYH Trigger: GTGATAACTTGGATCCTGTCAAAGCCCCACTGCAGT...AGAGGCCAGCATCTTTGCAGGCTTTGTATAAAGACCAGTATCAAACTTGTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CAA 90 bp | ATGTCTTTCCTAGTATTGGAAAATGACACAGTTTCAAGAACCAAGTaGTCACTTGCTTCTGACCCAGTATGGGTGTTGCCGGGTGTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: MSFLVLENDTVSRTK*SLASDPVWVLPGVA Trigger: GGCAACACCCGGCAACACCCATACTGGGTCAGAAGCAAGTGACAACTTGGTTCTTGAAACTGTGTCATTTTCCAATACTAGGAAAGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGTGCTACACCACATGCTACAGCACACAGCTAACAAACAGCACTGGTCCACAGCCTAGTATTGGAAAATaGCACAGTTTCAAGAACCAA | + |
|
Preference number: 2 (lower is better) Translates to: LCYTTCYSTQLTNSTGPQPSIGK*HSFKNQ Trigger: TTGGTTCTTGAAACTGTGTCATTTTCCAATACTAGG...CTGTGGACCAGTGCTGTTTGTTAGCTGTGTGCTGTAGCATGTGGTGTAGCACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCTGGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTGGCTAGAACATTCAACACATGTGTCCATTTTGTATaGAAGGGCAGTGTCAGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VWLLSPVFKLSVARTFNTCVHFV*KGSVSV Trigger: CACACTGACACTGCCCTTTCATACAAAATGGACACA...TGTGTTGAATGTTCTAGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCCAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGGAGAAATGGTGTAGGTAACTGCTTTCAAGAAGCTCACAAGTTTGATACTCCTGACCTACTCAAGTaGTTCAGGTTCTCAGCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: KRRNGVGNCFQEAHKFDTPDLLK*FRFSAL Trigger: CAGGGCTGAGAACCTGAAGCACTTGAGTAGGTCAGG...AGTATCAAACTTGTGAGCTTCTTGAAAGCAGTTACCTACACCATTTCTCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTGGCTAGAACATTCAACACAGAAATCTTTATACAAAGCCTaGAAAGATGCTGGCCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: GFSLLFSSFLWLEHSTQKSLYKA*KDAGLC Trigger: GCAGAGGCCAGCATCTTTGCAGGCTTTGTATAAAGA...TTTCTGTGTTGAATGTTCTAGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGGTGTGTGTGGACACAGAAAACTGGTCATGAGAGGCCATGCTAAAAAGGAGAGAAGTCAGCAGGCATaGGAATTCATTGTTGATATA | + |
|
Preference number: 2 (lower is better) Translates to: FGVCGHRKLVMRGHAKKERSQQA*EFIVDI Trigger: TATATCAACAATGAATTCTCATGCCTGCTGACTTCT...CTCCTTTTTAGCATGGCCTCTCATGACCAGTTTTCTGTGTCCACACACACCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTGGCTAGAACATTCAACACAGAAATTTCAGGCCAGTTTTTaGTGTGTGTGGACACAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GFSLLFSSFLWLEHSTQKFQASF*CVWTQK Trigger: TTTCTGTGTCCACACACACCAAAAACTGGCCTGAAA...TTTCTGTGTTGAATGTTCTAGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTGGCTAGAACATTCAACACAGAAAAGAAGTCAGCAGGCATaGGAATTCATTGTTGATATA | + |
|
Preference number: 2 (lower is better) Translates to: GFSLLFSSFLWLEHSTQKRSQQA*EFIVDI Trigger: TATATCAACAATGAATTCTCATGCCTGCTGACTTCT...TTTCTGTGTTGAATGTTCTAGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR TCA 72 bp | CTTCTGACCCAGTATGGGTGTTGCCGGGTGTTGCCCTaGGTGGGTGGGAAGGGGAGAACAGTGCTTCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLTQYGCCRVLP*VGGKGRTVLHL Trigger: GAGGTGAAGCACTGTTCTCCCCTTCCCACCCACTCAGGGCAACACCCGGCAACACCCATACTGGGTCAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGGGTCTGTCTTAGCAGGAAGCACTGGCCTACAGGACACCTGGAGAGCAGACGACCCAGTATGGGTGTaGCCGGGTGTTGCCCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: NGSVLAGSTGLQDTWRADDPVWV*PGVALS Trigger: ACTCAGGGCAACACCCGGCAACACCCATACTGGGTC...GTCTGCTCTCCAGGTGTCCTGTAGGCCAGTGCTTCCTGCTAAGACAGACCCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR TCA 72 bp | CAAAGCCTGCAAAGATGCTGGCCTCTGCTGGCCTCCTaGCCTACTCAAGTGCTTCAGGTTCTCAGCCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QSLQRCWPLLAS*PTQVLQVLSPA Trigger: GGCAGGGCTGAGAACCTGAAGCACTTGAGTAGGTCAGGAGGCCAGCAGAGGCCAGCATCTTTGCAGGCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CCA 72 bp | CCAGTATGGGTGTTGCCGGGTGTTGCCCTGAGTGGGTaGGAAGGGGAGAACAGTGCTTCACCTCCCAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: PVWVLPGVALSG*EGENSASPPKT Trigger: AGTTTTGGGAGGTGAAGCACTGTTCTCCCCTTCCCACCCACTCAGGGCAACACCCGGCAACACCCATACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATGGGTCTGTCTTAGCAGGAAGCACTGGCCTACAGGACACCTGGAGAGCAGAGACCCAGTATGGGTGTaGCCGGGTGTTGCCCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: KWVCLSRKHWPTGHLESRDPVWV*PGVALS Trigger: ACTCAGGGCAACACCCGGCAACACCCATACTGGGTC...TCTGCTCTCCAGGTGTCCTGTAGGCCAGTGCTTCCTGCTAAGACAGACCCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCATCACTCCACCTTGTCCCTGGAGTTTCAGGCCAGTTTTTGGTGTGTGTGGCCTGCCTCCTGCCCATaGTCAGTGAGCCCTTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SHHSTLSLEFQASFWCVWPASCP*SVSPSD Trigger: GTCAGAAGGGCTCACTGACAATGGGCAGGAGGCAGG...CCACACACACCAAAAACTGGCCTGAAACTCCAGGGACAAGGTGGAGTGATGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR TCA 72 bp | CAGCAGGTCCTCTCAACCCCAGCCTGTGGTGAGAGATaGTCTGTGCTACACCACATGCTACAGCACACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QQVLSTPACGER*SVLHHMLQHTA Trigger: AGCTGTGTGCTGTAGCATGTGGTGTAGCACAGATCATCTCTCACCACAGGCTGGGGTTGAGAGGACCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR TCA 72 bp | GTAGTGGCAGCAGGTCCTCTCAACCCCAGCCTGTGGTaGGAGATGATCTGTGCTACACCACATGCTACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VVAAGPLNPSLW*EMICATPHATA Trigger: TGCTGTAGCATGTGGTGTAGCACAGATCATCTCTCACCACAGGCTGGGGTTGAGAGGACCTGCTGCCACTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGCTACACCACATGCTACAGCACACAGCTAACAAACAGCACTGGTCCACAGAGCCATCACTCCACCTaGTCCCTGGAGTTTCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LCYTTCYSTQLTNSTGPQSHHST*SLEFQA Trigger: GGCCTGAAACTCCAGGGACAAGGTGGAGTGATGGCT...CTGTGGACCAGTGCTGTTTGTTAGCTGTGTGCTGTAGCATGTGGTGTAGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CCA 72 bp | TCAAGAACCAAGTTGTCACTTGCTTCTGACCCAGTATaGGTGTTGCCGGGTGTTGCCCTGAGTGGGTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SRTKLSLASDPV*VLPGVALSGWE Trigger: TTCCCACCCACTCAGGGCAACACCCGGCAACACCCATACTGGGTCAGAAGCAAGTGACAACTTGGTTCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR GCA 72 bp | GAAAGGGCAGTGTCAGTGTGGGATTACCCAGTAAGCTaGTATAGAAGCCATCACTCCACCTTGTCCCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ERAVSVWDYPVS*YRSHHSTLSLE Trigger: CTCCAGGGACAAGGTGGAGTGATGGCTTCTATAGCAGCTTACTGGGTAATCCCACACTGACACTGCCCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CCA 72 bp | AACAGCACTGGTCCACAGGACATGCTCTGGCTCGTCTaGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NSTGPQDMLWLV*LLSPVFKLSVA Trigger: AGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCCAGACGAGCCAGAGCATGTCCTGTGGACCAGTGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATGGGTCTGTCTTAGCAGGAAGCACTGGCCTACAGGACACCTGGAGAGCAGATACTGCAGTGGGGCTTaGACAGGATCCAAGTTATCA | + |
|
Preference number: 3 (lower is better) Translates to: KWVCLSRKHWPTGHLESRYCSGA*TGSKLS Trigger: TGATAACTTGGATCCTGTCAAAGCCCCACTGCAGTA...TCTGCTCTCCAGGTGTCCTGTAGGCCAGTGCTTCCTGCTAAGACAGACCCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATGGGTCTGTCTTAGCAGGAAGCACTGGCCTACAGGACACCTGGAGAGCAGAGTTTCAGGCCAGTTTTaGGTGTGTGTGGACACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KWVCLSRKHWPTGHLESRVSGQF*VCVDTE Trigger: TTCTGTGTCCACACACACCAAAAACTGGCCTGAAAC...TCTGCTCTCCAGGTGTCCTGTAGGCCAGTGCTTCCTGCTAAGACAGACCCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR GCA 72 bp | TCCTCTCAACCCCAGCCTGTGGTGAGAGATGATCTGTaGTACACCACATGCTACAGCACACAGCTAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SSQPQPVVRDDL*YTTCYSTQLTN Trigger: GTTTGTTAGCTGTGTGCTGTAGCATGTGGTGTAGCACAGATCATCTCTCACCACAGGCTGGGGTTGAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CCA 72 bp | CACTCCACCTTGTCCCTGGAGTTTCAGGCCAGTTTTTaGTGTGTGTGGACACAGAAAACTGGTCATGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HSTLSLEFQASF*CVWTQKTGHER Trigger: CCTCTCATGACCAGTTTTCTGTGTCCACACACACCAAAAACTGGCCTGAAACTCCAGGGACAAGGTGGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CCA 72 bp | CAGCTAACAAACAGCACTGGTCCACAGGACATGCTCTaGCTCGTCTGGCTTCTCTCTCCTGTTTTCAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: QLTNSTGPQDML*LVWLLSPVFKL Trigger: AAGCTTGAAAACAGGAGAGAGAAGCCAGACGAGCCAGAGCATGTCCTGTGGACCAGTGCTGTTTGTTAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CCA 72 bp | TCTTTATACAAAGCCTGCAAAGATGCTGGCCTCTGCTaGCCTCCTGACCTACTCAAGTGCTTCAGGTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SLYKACKDAGLC*PPDLLKCFRFS Trigger: TGAGAACCTGAAGCACTTGAGTAGGTCAGGAGGCCAGCAGAGGCCAGCATCTTTGCAGGCTTTGTATAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTGTGGGATTACCCAGTAAGCTGCTATAGAAGCCATCACTCCACCTTGTCCTACTGCAGTGGGGCTTaGACAGGATCCAAGTTATCA | + |
|
Preference number: 3 (lower is better) Translates to: SVWDYPVSCYRSHHSTLSYCSGA*TGSKLS Trigger: TGATAACTTGGATCCTGTCAAAGCCCCACTGCAGTA...GGACAAGGTGGAGTGATGGCTTCTATAGCAGCTTACTGGGTAATCCCACACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTGGCTAGAACATTCAACACAGAAAGTTTCAGGCCAGTTTTaGGTGTGTGTGGACACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GFSLLFSSFLWLEHSTQKVSGQF*VCVDTE Trigger: TTCTGTGTCCACACACACCAAAAACTGGCCTGAAAC...TTTCTGTGTTGAATGTTCTAGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CCA 72 bp | TCGTCTGGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTaGCTAGAACATTCAACACAGAAATGGGTCTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSGFSLLFSSFL*LEHSTQKWVCL Trigger: AAGACAGACCCATTTCTGTGTTGAATGTTCTAGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCCAGACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGCCTCTGCTGGCCTCCTGACCTACTCAAGTGCTTCAGGTTCTCAGCCCTGGCAGCGCCCAGATGCTaGGCGCGAAGAGCCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGLCWPPDLLKCFRFSALAAPRC*ARRARG Trigger: TCCCCGGGCTCTTCGCGCTCAGCATCTGGGCGCTGC...CAGGGCTGAGAACCTGAAGCACTTGAGTAGGTCAGGAGGCCAGCAGAGGCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR TCA 90 bp | AATGGGTCTGTCTTAGCAGGAAGCACTGGCCTACAGGACACCTGGAGAGCAGACGCAGCGCCCAGATGCTaGGCGCGAAGAGCCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NGSVLAGSTGLQDTWRADAAPRC*ARRARG Trigger: TCCCCGGGCTCTTCGCGCTCAGCATCTGGGCGCTGC...GTCTGCTCTCCAGGTGTCCTGTAGGCCAGTGCTTCCTGCTAAGACAGACCCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGGAAGGGGAGAACAGTGCTTCACCTCCCAAAACTCTTTCCCAGGCCCAAGAGAGCTGGGGAGAGATaGGGACGGCATTGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GGKGRTVLHLPKLFPRPKRAGER*GRHWPC Trigger: ACATGGCCAATGCCGTCCTCATCTCTCCCCAGCTCT...CTTGGGCCTGGGAAAGAGTTTTGGGAGGTGAAGCACTGTTCTCCCCTTCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CAA 72 bp | ACCAAGTTGTCACTTGCTTCTGACCCAGTATGGGTGTaGCCGGGTGTTGCCCTGAGTGGGTGGGAAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TKLSLASDPVWV*PGVALSGWEGE Trigger: CTCCCCTTCCCACCCACTCAGGGCAACACCCGGCAACACCCATACTGGGTCAGAAGCAAGTGACAACTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCCTCTGCTGGCCTCCTGACCTACTCAAGTGCTTCAGGTTCTCAGCCCTGACCAGACATATTCTGTaGCAAGCCAGTGCCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGLCWPPDLLKCFRFSALTRHIL*QASACL Trigger: CAGACAGGCACTGGCTTGCCACAGAATATGTCTGGT...CAGGGCTGAGAACCTGAAGCACTTGAGTAGGTCAGGAGGCCAGCAGAGGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR TCA 90 bp | GAGAACAGTGCTTCACCTCCCAAAACTCTTTCCCAGGCCCAAGGAAGGCTCCTCCTTCTTGCACAGCAGTaGGAACCAGTAGAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ENSASPPKTLSQAQGRLLLLAQQ*EPVELG Trigger: CCCCAGCTCTACTGGTTCTCACTGCTGTGCAAGAAG...GAGGAGCCTTCCTTGGGCCTGGGAAAGAGTTTTGGGAGGTGAAGCACTGTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR CCA 90 bp | TTCACCTCCCAAAACTCTTTCCCAGGCCCAAGGAAGGCTCCTCAGGCTTGCTGGGTGCGTGTGAGTTTCTaGCTTTTGGTTCGGCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: FTSQNSFPGPRKAPQACWVRVSF*LLVRHR Trigger: ACGGTGCCGAACCAAAAGCCAGAAACTCACACGCAC...CCAGCAAGCCTGAGGAGCCTTCCTTGGGCCTGGGAAAGAGTTTTGGGAGGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTACACCACATGCTACAGCACACAGCTAACAAACAGCACTGGTCCACAGGTGGCCAGCACTGCCTaGACTGAGGACACTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCYTTCYSTQLTNSTGPQVASTA*TEDTNL Trigger: CAGGTTAGTGTCCTCAGTGCAGGCAGTGCTGGCCAC...CTGTGGACCAGTGCTGTTTGTTAGCTGTGTGCTGTAGCATGTGGTGTAGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CAA 72 bp | AAACTCTTTCCCAGGCCCAAGGAAGGCTCCTCAGGCTaGCTGGTAAAACTACTGCAGTGGGGCTTTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLFPRPKEGSSG*LVKLLQWGFDR Trigger: CCTGTCAAAGCCCCACTGCAGTAGTTTTACCAGCAAGCCTGAGGAGCCTTCCTTGGGCCTGGGAAAGAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR TCA 90 bp | TCAGTGTGGGATTACCCAGTAAGCTGCTATAGAAGCCATCACTCCACCTTGTCCAGAGCTGGGGAGAGATaGGGACGGCATTGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SVWDYPVSCYRSHHSTLSRAGER*GRHWPC Trigger: ACATGGCCAATGCCGTCCTCATCTCTCCCCAGCTCT...GGACAAGGTGGAGTGATGGCTTCTATAGCAGCTTACTGGGTAATCCCACACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR CCA 90 bp | AAATGGGTCTGTCTTAGCAGGAAGCACTGGCCTACAGGACACCTGGAGAGCAGAACCAGACATATTCTGTaGCAAGCCAGTGCCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KWVCLSRKHWPTGHLESRTRHIL*QASACL Trigger: CAGACAGGCACTGGCTTGCCACAGAATATGTCTGGT...TCTGCTCTCCAGGTGTCCTGTAGGCCAGTGCTTCCTGCTAAGACAGACCCATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR CCA 90 bp | AGCCATCACTCCACCTTGTCCCTGGAGTTTCAGGCCAGTTTTTGGTGTGTGTGGCATCCTTTTTGGCTTTaGCAGTGTCAAAGAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHHSTLSLEFQASFWCVWHPFWL*QCQRAG Trigger: CCCGGCTCTTTGACACTGCCAAAGCCAAAAAGGATG...CCACACACACCAAAAACTGGCCTGAAACTCCAGGGACAAGGTGGAGTGATGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTACACCACATGCTACAGCACACAGCTAACAAACAGCACTGGTCCACAGGGACCAGTACATGAATaGGAACAGAAGGATCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCYTTCYSTQLTNSTGPQGPVHE*EQKDPA Trigger: TGCCGGATCCTTCTGTTCCCATTCATGTACTGGTCC...CTGTGGACCAGTGCTGTTTGTTAGCTGTGTGCTGTAGCATGTGGTGTAGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTACACCACATGCTACAGCACACAGCTAACAAACAGCACTGGTCCACAGCGGAGTACTCAATTCTaGTGTGAAGATGCATCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LCYTTCYSTQLTNSTGPQRSTQF*CEDASD Trigger: GTCGGATGCATCTTCACAGCAGAATTGAGTACTCCG...CTGTGGACCAGTGCTGTTTGTTAGCTGTGTGCTGTAGCATGTGGTGTAGCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094014.10 |
||
| CDS-3UTR GCA 90 bp | AATGGGTCTGTCTTAGCAGGAAGCACTGGCCTACAGGACACCTGGAGAGCAGACAGAAGCGTATGCTGCTaGTTTAGCTGTGAAATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NGSVLAGSTGLQDTWRADRSVCC*FSCEIG Trigger: ACCTATTTCACAGCTAAAGCAGCAGCATACGCTTCT...GTCTGCTCTCCAGGTGTCCTGTAGGCCAGTGCTTCCTGCTAAGACAGACCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169560.2 |
||
| 3UTR CAA 72 bp | TACCCAGTAAGCTGCTATAGAAGCCATCACTCCACCTaGTCCCTGGAGTTTCAGGCCAGTTTTTGGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YPVSCYRSHHST*SLEFQASFWCV Trigger: CACACACCAAAAACTGGCCTGAAACTCCAGGGACAAGGTGGAGTGATGGCTTCTATAGCAGCTTACTGGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CAA 72 bp | TACAGGACACCTGGAGAGCAGACGTCTGTGTCCATTTaGTATGAAAGGGCAGTGTCAGTGTGGGATTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: YRTPGEQTSVSI*YERAVSVWDYP Trigger: TGGGTAATCCCACACTGACACTGCCCTTTCATACAAAATGGACACAGACGTCTGCTCTCCAGGTGTCCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR TCA 90 bp | TCAGTGTGGGATTACCCAGTAAGCTGCTATAGAAGCCATCACTCCACCTTGTCCCATAGGACCAGTACATaGATGGGAACAGAAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SVWDYPVSCYRSHHSTLSHRTST*MGTEGS Trigger: GGATCCTTCTGTTCCCATTCATGTACTGGTCCTATG...GGACAAGGTGGAGTGATGGCTTCTATAGCAGCTTACTGGGTAATCCCACACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGTCAGTGTGGGATTACCCAGTAAGCTGCTATAGAAGCCATCACTCCACCTACTCAATTCTGCTGTaGAGATGCATCCGACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVSVWDYPVSCYRSHHSTYSILL*RCIRQR Trigger: TCTTTGTCGGATGCATCTTCACAGCAGAATTGAGTA...GGTGGAGTGATGGCTTCTATAGCAGCTTACTGGGTAATCCCACACTGACACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094014.10 |
||
| CDS-3UTR GCA 90 bp | TATACAGATAAGGACAAGGGCTGTCTAGTAAACGGTAAAAGACATACCCACGATGTGGCCAGCACTGCCTaGACTGAGGACACTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: YTDKDKGCLVNGKRHTHDVASTA*TEDTNL Trigger: CAGGTTAGTGTCCTCAGTGCAGGCAGTGCTGGCCAC...ATCGTGGGTATGTCTTTTACCGTTTACTAGACAGCCCTTGTCCTTATCTGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR CCA 90 bp | GCTCACAAGTTTGATACTGGTCTTTATACAAAGCCTGCAAAGATGCTGGCCTCTGTGCGTGTGAGTTTCTaGCTTTTGGTTCGGCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: AHKFDTGLYTKPAKMLASVRVSF*LLVRHR Trigger: ACGGTGCCGAACCAAAAGCCAGAAACTCACACGCAC...AGAGGCCAGCATCTTTGCAGGCTTTGTATAAAGACCAGTATCAAACTTGTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR TCA 90 bp | TATACAGATAAGGACAAGGGCTGTCTAGTAAACGGTAAAAGACATACCCACGATCTTCTTGCACAGCAGTaGGAACCAGTAGAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YTDKDKGCLVNGKRHTHDLLAQQ*EPVELG Trigger: CCCCAGCTCTACTGGTTCTCACTGCTGTGCAAGAAG...ATCGTGGGTATGTCTTTTACCGTTTACTAGACAGCCCTTGTCCTTATCTGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTGGCTAGAACATTCAACACACATCCTTTTTGGCTTTaGCAGTGTCAAAGAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VWLLSPVFKLSVARTFNTHPFWL*QCQRAG Trigger: CCCGGCTCTTTGACACTGCCAAAGCCAAAAAGGATG...TGTGTTGAATGTTCTAGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCCAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTCTCTCTCCTGTTTTCAAGCTTTCTGTGGCTAGAACATTCAACACAGAAAAACAGAATGACCGTGTaGTGTGTGACCATAAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GFSLLFSSFLWLEHSTQKNRMTV*CVTIRR Trigger: CCGCCTTATGGTCACACATCACACGGTCATTCTGTT...TTTCTGTGTTGAATGTTCTAGCCACAGAAAGCTTGAAAACAGGAGAGAGAAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR TCA 90 bp | GTATTGGAAAATGACACAGTTTCAAGAACCAAGTTGTCACTTGCTTCTGACCCACATAGGACCAGTACATaGATGGGAACAGAAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: VLENDTVSRTKLSLASDPHRTST*MGTEGS Trigger: GGATCCTTCTGTTCCCATTCATGTACTGGTCCTATG...TGGGTCAGAAGCAAGTGACAACTTGGTTCTTGAAACTGTGTCATTTTCCAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR GCA 90 bp | TTTGGTGTGTGTGGACACAGAAAACTGGTCATGAGAGGCCATGCTAAAAAGGAGAGAAGCGTATGCTGCTaGTTTAGCTGGATCATTATT | + |
|
Preference number: 4 (lower is better) Translates to: FGVCGHRKLVMRGHAKKERSVCC*FSWIII Trigger: AATAATGATCCAGCTAAAGCAGCAGCATACGCTTCT...CTCCTTTTTAGCATGGCCTCTCATGACCAGTTTTCTGTGTCCACACACACCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094014.10 |
||
| CDS-3UTR TCA 90 bp | AAAAGGAGAAATGGTGTAGGTAACTGCTTTCAAGAAGCTCACAAGTTTGATACTAACAGAATGACCGTGTaGTGTGTGACCATAAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KRRNGVGNCFQEAHKFDTNRMTV*CVTIRR Trigger: CCGCCTTATGGTCACACATCACACGGTCATTCTGTT...AGTATCAAACTTGTGAGCTTCTTGAAAGCAGTTACCTACACCATTTCTCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| 3UTR CAA 72 bp | ACGGTAAAAGACATACCCACGATGTCTTTCCTAGTATaGGAAAATGACACAGTTTCAAGAACCAAGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVKDIPTMSFLV*ENDTVSRTKLS Trigger: TGACAACTTGGTTCTTGAAACTGTGTCATTTTCCAATACTAGGAAAGACATCGTGGGTATGTCTTTTACCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS TCA 90 bp | CGTCTTCCGTCCATCCGGGCCGCAAACGGTGCAGCGCCCAGATGCTaGGCGCGAAGAGCCCGGGGAAGAAGAGCGCGCCGCTGGCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLPSIRAANGAAPRC*ARRARGRRARRWLE Trigger: CTCTAGCCAGCGGCGCGCTCTTCTTCCCCGGGCTCTTCGCGCTCAGCATCTGGGCGCTGCACCGTTTGCGGCCCGGATGGACGGAAGACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS CCA 90 bp | GCCCCGCCCAGGTGGCCAGCACTGCCTGCACTGAGGACACTAACCTaGTGCCGACCGTCAGGCAGTCGTCTTCCGTCCATCCGGGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: APPRWPALPALRTLT*CRPSGSRLPSIRAA Trigger: TGCGGCCCGGATGGACGGAAGACGACTGCCTGACGGTCGGCACCAGGTTAGTGTCCTCAGTGCAGGCAGTGCTGGCCACCTGGGCGGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS GCA 90 bp | CCGACCGTCAGGCAGTCGTCTTCCGTCCATCCGGGCCGCAAACGGTaGAGCGCCCAGATGCTGAGCGCGAAGAGCCCGGGGAAGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PTVRQSSSVHPGRKR*SAQMLSAKSPGKKS Trigger: GCTCTTCTTCCCCGGGCTCTTCGCGCTCAGCATCTGGGCGCTGCACCGTTTGCGGCCCGGATGGACGGAAGACGACTGCCTGACGGTCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS GCA 90 bp | CCGCCCAGGTGGCCAGCACTGCCTGCACTGAGGACACTAACCTGGTaGCGACCGTCAGGCAGTCGTCTTCCGTCCATCCGGGCCGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PPRWPALPALRTLTW*RPSGSRLPSIRAAN Trigger: GTTTGCGGCCCGGATGGACGGAAGACGACTGCCTGACGGTCGGCACCAGGTTAGTGTCCTCAGTGCAGGCAGTGCTGGCCACCTGGGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS GCA 90 bp | CAGGAGATGATGACGGTGAGCCCCGCCCAGGTGGCCAGCACTGCCTaGACTGAGGACACTAACCTGGTGCCGACCGTCAGGCAGTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QEMMTVSPAQVASTA*TEDTNLVPTVRQSS Trigger: AGACGACTGCCTGACGGTCGGCACCAGGTTAGTGTCCTCAGTGCAGGCAGTGCTGGCCACCTGGGCGGGGCTCACCGTCATCATCTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR CAA 90 bp | TTCACCTCCCAAAACTCTTTCCCAGGCCCAAGGAAGGCTCCTCAGGCTTGCTGGAGCCGGGCCGCCTTCTaGCACAGCAGTGAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: FTSQNSFPGPRKAPQACWSRAAF*HSSENQ Trigger: CTGGTTCTCACTGCTGTGCAAGAAGGCGGCCCGGCT...CCAGCAAGCCTGAGGAGCCTTCCTTGGGCCTGGGAAAGAGTTTTGGGAGGTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS-3UTR CAA 90 bp | GCTCACAAGTTTGATACTGGTCTTTATACAAAGCCTGCAAAGATGCTGGCCTCTAGCCGGGCCGCCTTCTaGCACAGCAGTGAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: AHKFDTGLYTKPAKMLASSRAAF*HSSENQ Trigger: CTGGTTCTCACTGCTGTGCAAGAAGGCGGCCCGGCT...AGAGGCCAGCATCTTTGCAGGCTTTGTATAAAGACCAGTATCAAACTTGTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS TCA 90 bp | CTTGGAGCAGGCTTAGTCCTTTTTGTTGGCCATAGGACCAGTACATaGATGGGAACAGAAGGATCCGGCAGAACAGAAAGGTGGTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: LGAGLVLFVGHRTST*MGTEGSGRTERWSP Trigger: CGGTGACCACCTTTCTGTTCTGCCGGATCCTTCTGTTCCCATTCATGTACTGGTCCTATGGCCAACAAAAAGGACTAAGCCTGCTCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094014.10 ENSMUST00000129853.8 ENSMUST00000169560.2 |
||
| CDS-3UTR CAA 90 bp | AATGGGTCTGTCTTAGCAGGAAGCACTGGCCTACAGGACACCTGGAGAGCAGACACGGCATTGGCCATGTaGCAGTGTAAAGGGATATTA | + |
|
Preference number: 5 (lower is better) Translates to: NGSVLAGSTGLQDTWRADTALAM*QCKGIL Trigger: TAATATCCCTTTACACTGCAACATGGCCAATGCCGT...GTCTGCTCTCCAGGTGTCCTGTAGGCCAGTGCTTCCTGCTAAGACAGACCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS TCA 90 bp | TCATTATTCTGGCCAGCGACACAAACGGAGTACTCAATTCTGCTGTaGAGATGCATCCGACAAAGAAGTCTCCAAGGTCTCCTCGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLFWPATQTEYSILL*RCIRQRSLQGLLGA Trigger: AGCTCCGAGGAGACCTTGGAGACTTCTTTGTCGGATGCATCTTCACAGCAGAATTGAGTACTCCGTTTGTGTCGCTGGCCAGAATAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000129853.8 |
||
| CDS GCA 90 bp | CTGGATCATTATTCTGGCCAGCGACACAAACGGAGTACTCAATTCTaGTGTGAAGATGCATCCGACAAAGAAGTCTCCAAGGTCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LDHYSGQRHKRSTQF*CEDASDKEVSKVSS Trigger: CGAGGAGACCTTGGAGACTTCTTTGTCGGATGCATCTTCACAGCAGAATTGAGTACTCCGTTTGTGTCGCTGGCCAGAATAATGATCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000129853.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTGTGGGATTACCCAGTAAGCTGCTATAGAAGCCATCACTCCACCTTGTCCACGGCATTGGCCATGTaGCAGTGTAAAGGGATATTA | + |
|
Preference number: 5 (lower is better) Translates to: SVWDYPVSCYRSHHSTLSTALAM*QCKGIL Trigger: TAATATCCCTTTACACTGCAACATGGCCAATGCCGT...GGACAAGGTGGAGTGATGGCTTCTATAGCAGCTTACTGGGTAATCCCACACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS GCA 90 bp | ATCATATATGGAATCAAAAACCAGACATATTCTGTGGCAAGCCAGTaGCTGTCTGAGACCACGTTCTTGCAGGAGATGATGACGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IIYGIKNQTYSVASQ*LSETTFLQEMMTVS Trigger: GCTCACCGTCATCATCTCCTGCAAGAACGTGGTCTCAGACAGGCACTGGCTTGCCACAGAATATGTCTGGTTTTTGATTCCATATATGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS TCA 72 bp | TCCATCCGGGCCGCAAACGGTGCAGCGCCCAGATGCTaGGCGCGAAGAGCCCGGGGAAGAAGAGCGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SIRAANGAAPRC*ARRARGRRARR Trigger: GCGGCGCGCTCTTCTTCCCCGGGCTCTTCGCGCTCAGCATCTGGGCGCTGCACCGTTTGCGGCCCGGATGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS GCA 72 bp | AGGCAGTCGTCTTCCGTCCATCCGGGCCGCAAACGGTaGAGCGCCCAGATGCTGAGCGCGAAGAGCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RQSSSVHPGRKR*SAQMLSAKSPG Trigger: CCCCGGGCTCTTCGCGCTCAGCATCTGGGCGCTGCACCGTTTGCGGCCCGGATGGACGGAAGACGACTGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS GCA 72 bp | ATGACGGTGAGCCCCGCCCAGGTGGCCAGCACTGCCTaGACTGAGGACACTAACCTGGTGCCGACCGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: MTVSPAQVASTA*TEDTNLVPTVR Trigger: CCTGACGGTCGGCACCAGGTTAGTGTCCTCAGTGCAGGCAGTGCTGGCCACCTGGGCGGGGCTCACCGTCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS CCA 72 bp | AGGTGGCCAGCACTGCCTGCACTGAGGACACTAACCTaGTGCCGACCGTCAGGCAGTCGTCTTCCGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: RWPALPALRTLT*CRPSGSRLPSI Trigger: GATGGACGGAAGACGACTGCCTGACGGTCGGCACCAGGTTAGTGTCCTCAGTGCAGGCAGTGCTGGCCACCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS CAA 72 bp | TCTGTGGCAAGCCAGTGCCTGTCTGAGACCACGTTCTaGCAGGAGATGATGACGGTGAGCCCCGCCCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SVASQCLSETTF*QEMMTVSPAQV Trigger: CACCTGGGCGGGGCTCACCGTCATCATCTCCTGCAAGAACGTGGTCTCAGACAGGCACTGGCTTGCCACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS CAA 90 bp | CAGACATATTCTGTGGCAAGCCAGTGCCTGTCTGAGACCACGTTCTaGCAGGAGATGATGACGGTGAGCCCCGCCCAGGTGGCCAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: QTYSVASQCLSETTF*QEMMTVSPAQVAST Trigger: AGTGCTGGCCACCTGGGCGGGGCTCACCGTCATCATCTCCTGCAAGAACGTGGTCTCAGACAGGCACTGGCTTGCCACAGAATATGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS GCA 72 bp | TGGCTTTGGCAGTGTCAAAGAGCCGGGCCGCCTTCTTaGACAGCAGTGAGAACCAGTAGAGCTGGGGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: WLWQCQRAGPPS*TAVRTSRAGER Trigger: TCTCTCCCCAGCTCTACTGGTTCTCACTGCTGTGCAAGAAGGCGGCCCGGCTCTTTGACACTGCCAAAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094014.10 ENSMUST00000129853.8 ENSMUST00000169560.2 |
||
| CDS TCA 72 bp | TGCACAGCAGTGAGAACCAGTAGAGCTGGGGAGAGATaGGGACGGCATTGGCCATGTTGCAGTGTAAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CTAVRTSRAGER*GRHWPCCSVKG Trigger: TCCCTTTACACTGCAACATGGCCAATGCCGTCCTCATCTCTCCCCAGCTCTACTGGTTCTCACTGCTGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094014.10 ENSMUST00000129853.8 ENSMUST00000169560.2 |
||
| CDS CCA 72 bp | AGGAAGTTTCGGATAATGGTGGTGCGTGTGAGTTTCTaGCTTTTGGTTCGGCACCGTTCGCAGCAGTACATG | + |
|
Preference number: 6 (lower is better) Translates to: RKFRIMVVRVSF*LLVRHRSQQYM Trigger: CATGTACTGCTGCGAACGGTGCCGAACCAAAAGCCAGAAACTCACACGCACCACCATTATCCGAAACTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094014.10 ENSMUST00000129853.8 ENSMUST00000169560.2 |
||
| CDS TCA 72 bp | TGGCCAGCGACACAAACGGAGTACTCAATTCTGCTGTaGAGATGCATCCGACAAAGAAGTCTCCAAGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: WPATQTEYSILL*RCIRQRSLQGL Trigger: GAGACCTTGGAGACTTCTTTGTCGGATGCATCTTCACAGCAGAATTGAGTACTCCGTTTGTGTCGCTGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000129853.8 |
||
| CDS TCA 72 bp | GGCTTAGTCCTTTTTGTTGGCCATAGGACCAGTACATaGATGGGAACAGAAGGATCCGGCAGAACAGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLVLFVGHRTST*MGTEGSGRTER Trigger: CCTTTCTGTTCTGCCGGATCCTTCTGTTCCCATTCATGTACTGGTCCTATGGCCAACAAAAAGGACTAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094014.10 ENSMUST00000129853.8 ENSMUST00000169560.2 |
||
| CDS GCA 72 bp | GGAATCAAAAACCAGACATATTCTGTGGCAAGCCAGTaGCTGTCTGAGACCACGTTCTTGCAGGAGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: GIKNQTYSVASQ*LSETTFLQEMM Trigger: CATCATCTCCTGCAAGAACGTGGTCTCAGACAGGCACTGGCTTGCCACAGAATATGTCTGGTTTTTGATTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS CCA 72 bp | GAAGCGTATGCTGCTGCTTTAGCTGGATCATTATTCTaGCCAGCGACACAAACGGAGTACTCAATTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: EAYAAALAGSLF*PATQTEYSILL Trigger: CAGCAGAATTGAGTACTCCGTTTGTGTCGCTGGCCAGAATAATGATCCAGCTAAAGCAGCAGCATACGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000129853.8 |
||
| CDS CCA 72 bp | AGATCATATATGGAATCAAAAACCAGACATATTCTGTaGCAAGCCAGTGCCTGTCTGAGACCACGTTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSYMESKTRHIL*QASACLRPRSC Trigger: GCAAGAACGTGGTCTCAGACAGGCACTGGCTTGCCACAGAATATGTCTGGTTTTTGATTCCATATATGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS CCA 72 bp | TCTGGCTTTTGGTTCGGCACCGTTCGCAGCAGTACATaGCATAGAAGTCATAGATCATATATGGAATCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SGFWFGTVRSST*HRSHRSYMESK Trigger: TTTTGATTCCATATATGATCTATGACTTCTATGCCATGTACTGCTGCGAACGGTGCCGAACCAAAAGCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094014.10 ENSMUST00000169560.2 |
||
| CDS TCA 72 bp | TGTGAAATAGGTACAAGGAATAACAGAATGACCGTGTaGTGTGTGACCATAAGGCGGTTTTCAATCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CEIGTRNNRMTV*CVTIRRFSIRK Trigger: CTTCCTGATTGAAAACCGCCTTATGGTCACACATCACACGGTCATTCTGTTATTCCTTGTACCTATTTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094014.10 ENSMUST00000129853.8 ENSMUST00000169560.2 |
||