Pregenerated sensors for TKTL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031397Ensembl transcript IDs: ENSMUST00000010127.12, ENSMUST00000156959.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACGTCTTCACAGAACAGTCATCACAACAGCACAAGTGATCATAACTaGTTTTGTTCTGTTCATCAACCTGTGAACTGTGGAGGGGATATA | + |
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Preference number: 1 (lower is better) Translates to: TSSQNSHHNSTSDHN*FCSVHQPVNCGGDI Trigger: TATATCCCCTCCACAGTTCACAGGTTGATGAACAGAACAAAAGCAGTTATGATCACTTGTGCTGTTGTGATGACTGTTCTGTGAAGACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| 3UTR TCA 90 bp | TTTGCCTTTAAGGAGAACAAAGCGCAATCATCATTTCTATCTAATTaGTGGTTTTGGCACAAGCATAAACATACAGAGAAGAGGCTAGTC | + |
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Preference number: 1 (lower is better) Translates to: FAFKENKAQSSFLSN*WFWHKHKHTEKRLV Trigger: GACTAGCCTCTTCTCTGTATGTTTATGCTTGTGCCAAAACCATCAATTAGATAGAAATGATGATTGCGCTTTGTTCTCCTTAAAGGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| 3UTR TCA 90 bp | CTGTCACTTCTACATTGTTCCTTAATCCACTTATATTCAGTCTTATaGGAAAGTTCAGTGTCAGGTAGTTGTCTTGTTATCTATTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: LSLLHCSLIHLYSVL*ESSVSGSCLVIYSA Trigger: GGCAGAATAGATAACAAGACAACTACCTGACACTGAACTTTCTCATAAGACTGAATATAAGTGGATTAAGGAACAATGTAGAAGTGACAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| 3UTR-3UTR TCA 90 bp | GAAAAATCAAGAGCATCTGAAATTACACATAACTCAGGAACCTGCAGGCAGTGTGGGGGTCTAGTTCTGTaGAAGGTGGGCTGCGGACTA | + |
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Preference number: 2 (lower is better) Translates to: EKSRASEITHNSGTCRQCGGLVL*KVGCGL Trigger: TAGTCCGCAGCCCACCTTTCACAGAACTAGACCCCC...ACACTGCCTGCAGGTTCCTGAGTTATGTGTAATTTCAGATGCTCTTGATTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| 3UTR CCA 72 bp | TGGCCTTCCATACCAACTTTCCGCATCCTCAACATTTaGCATGCCTCGGGCCTTGAAGGTTTTGGCAACCAC | + |
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Preference number: 3 (lower is better) Translates to: WPSIPTFRILNI*HASGLEGFGNH Trigger: GTGGTTGCCAAAACCTTCAAGGCCCGAGGCATGCCAAATGTTGAGGATGCGGAAAGTTGGTATGGAAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156959.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTTCTTTTGGCATTGGCCTTCCATACCAACTTTCCGCATCCTCAACATTTGGCGGGCCTTGAAGGTTTaGGCAACCACAGCAGTGGGC | + |
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Preference number: 3 (lower is better) Translates to: SFFWHWPSIPTFRILNIWRALKV*ATTAVG Trigger: GCCCACTGCTGTGGTTGCCAAAACCTTCAAGGCCCG...CCAAATGTTGAGGATGCGGAAAGTTGGTATGGAAGGCCAATGCCAAAAGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156959.2 |
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| 3UTR TCA 72 bp | TTGAACAGCACTATGTATCTCGGGGGTCTAGTTCTGTaGAAGGTGGGCTGCGGACTACAATTCAACACACAT | + |
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Preference number: 3 (lower is better) Translates to: LNSTMYLGGLVL*KVGCGLQFNTH Trigger: ATGTGTGTTGAATTGTAGTCCGCAGCCCACCTTTCACAGAACTAGACCCCCGAGATACATAGTGCTGTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| 3UTR GCA 72 bp | CAGAACAGTCATCACAACAGCACAAGTGATCATAACTaGTTTTGTTCTGTTCATCAACCTGTGAACTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: QNSHHNSTSDHN*FCSVHQPVNCG Trigger: TCCACAGTTCACAGGTTGATGAACAGAACAAAAGCAGTTATGATCACTTGTGCTGTTGTGATGACTGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| 3UTR TCA 72 bp | AAGGAGAACAAAGCGCAATCATCATTTCTATCTAATTaGTGGTTTTGGCACAAGCATAAACATACAGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: KENKAQSSFLSN*WFWHKHKHTEK Trigger: CTTCTCTGTATGTTTATGCTTGTGCCAAAACCATCAATTAGATAGAAATGATGATTGCGCTTTGTTCTCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | GCTCTTTCTTTTGGCATTGGCCTTCCATACCAACTTTCCGCATCCTCAACATTTGGATTCGCAGGCGGTTaGCCATGTCCCGCAACACCT | + |
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Preference number: 4 (lower is better) Translates to: ALSFGIGLPYQLSASSTFGFAGG*PCPATP Trigger: AGGTGTTGCGGGACATGGCCAACCGCCTGCGAATCC...AAATGTTGAGGATGCGGAAAGTTGGTATGGAAGGCCAATGCCAAAAGAAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156959.2 |
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| CDS-3UTR CCA 90 bp | TCAACATTTGGCATGCCTCGGGCCTTGAAGGTTTTGGCAACCACAGCAGTGGGCCTCAGCATTGCTGCATaGTATGAGATAGCTAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: STFGMPRALKVLATTAVGLSIAA*YEIASG Trigger: ACCACTAGCTATCTCATACCATGCAGCAATGCTGAG...GCCCACTGCTGTGGTTGCCAAAACCTTCAAGGCCCGAGGCATGCCAAATGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156959.2 |
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| CDS-3UTR TCA 90 bp | GCTCTTTCTTTTGGCATTGGCCTTCCATACCAACTTTCCGCATCCTCAACATTTCATGGCACAGGGTCTTaGCATCACGGCCATCCACCA | + |
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Preference number: 4 (lower is better) Translates to: ALSFGIGLPYQLSASSTFHGTGS*HHGHPP Trigger: TGGTGGATGGCCGTGATGTCAAGACCCTGTGCCATG...AAATGTTGAGGATGCGGAAAGTTGGTATGGAAGGCCAATGCCAAAAGAAAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156959.2 |
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| CDS-3UTR TCA 90 bp | TGGTTTTGGCACAAGCATAAACATACAGAGAAGAGGCTAGTCTTCTCAGACCAACATGGCACAGGGTCTTaGCATCACGGCCATCCACCA | + |
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Preference number: 4 (lower is better) Translates to: WFWHKHKHTEKRLVFSDQHGTGS*HHGHPP Trigger: TGGTGGATGGCCGTGATGTCAAGACCCTGTGCCATG...TTGGTCTGAGAAGACTAGCCTCTTCTCTGTATGTTTATGCTTGTGCCAAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR GCA 90 bp | TGTTCATCAACCTGTGAACTGTGGAGGGGATATAAAGGGAAACAGCAGAGAAAACCACAGCAGTGGGCTTaGCTCTCACTTGAGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: CSSTCELWRGYKGKQQRKPQQWA*LSLELP Trigger: AGGCAGCTCAAGTGAGAGGCAAGCCCACTGCTGTGG...TTTTCTCTGCTGTTTCCCTTTATATCCCCTCCACAGTTCACAGGTTGATGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR GCA 90 bp | TGGTTTTGGCACAAGCATAAACATACAGAGAAGAGGCTAGTCTTCTCAGACCAAGCTACTAGGGCTTCATaGAGGGTGACTCCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: WFWHKHKHTEKRLVFSDQATRAS*RVTPAP Trigger: TGGAGCAGGAGTCACCCTGCATGAAGCCCTAGTAGC...TTGGTCTGAGAAGACTAGCCTCTTCTCTGTATGTTTATGCTTGTGCCAAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | TGTTCATCAACCTGTGAACTGTGGAGGGGATATAAAGGGAAACAGCAGAGAAAATGGCAACCACAGCAGTaGGCTTGCCTCTCACTTGAG | + |
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Preference number: 4 (lower is better) Translates to: CSSTCELWRGYKGKQQRKWQPQQ*ACLSLE Trigger: CTCAAGTGAGAGGCAAGCCCACTGCTGTGGTTGCCA...TTTTCTCTGCTGTTTCCCTTTATATCCCCTCCACAGTTCACAGGTTGATGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | ACAAGTGATCATAACTGCTTTTGTTCTGTTCATCAACCTGTGAACTGTGGAGGGGAATTGCTCGGAACATaGCCAGGTCTTCCAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TSDHNCFCSVHQPVNCGGELLGT*PGLPGP Trigger: TGGCCCTGGAAGACCTGGCCATGTTCCGAGCAATTC...CCCTCCACAGTTCACAGGTTGATGAACAGAACAAAAGCAGTTATGATCACTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR TCA 90 bp | TGTTCATCAACCTGTGAACTGTGGAGGGGATATAAAGGGAAACAGCAGAGAAAAGGCTTGCCTCTCACTTaGGCTGCCTGTGAGAATACA | + |
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Preference number: 4 (lower is better) Translates to: CSSTCELWRGYKGKQQRKGLPLT*AACENT Trigger: TGTATTCTCACAGGCAGCTCAAGTGAGAGGCAAGCC...TTTTCTCTGCTGTTTCCCTTTATATCCCCTCCACAGTTCACAGGTTGATGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR GCA 90 bp | TGTTCATCAACCTGTGAACTGTGGAGGGGATATAAAGGGAAACAGCAGAGAAAACTCCATGGAGACTGCTaGACAGACAGCTCCTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: CSSTCELWRGYKGKQQRKLHGDC*TDSSSN Trigger: ATTGGAGGAGCTGTCTGTGCAGCAGTCTCCATGGAG...TTTTCTCTGCTGTTTCCCTTTATATCCCCTCCACAGTTCACAGGTTGATGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | ACAAAGGTGTTAACTGGTTTTGCCTTTAAGGAGAACAAAGCGCAATCATCATTTGGATTCGCAGGCGGTTaGCCATGTCCCGCAACACCT | + |
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Preference number: 4 (lower is better) Translates to: TKVLTGFAFKENKAQSSFGFAGG*PCPATP Trigger: AGGTGTTGCGGGACATGGCCAACCGCCTGCGAATCC...AAATGATGATTGCGCTTTGTTCTCCTTAAAGGCAAAACCAGTTAACACCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR TCA 90 bp | TCTTTCTTTTGGCATTGGCCTTCCATACCAACTTTCCGCATCCTCAACATTTGGAGAACAGCACAGACATaGTCTCAGCATTGCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: SFFWHWPSIPTFRILNIWRTAQT*SQHCCM Trigger: CATGCAGCAATGCTGAGATCATGTCTGTGCTGTTCT...CCAAATGTTGAGGATGCGGAAAGTTGGTATGGAAGGCCAATGCCAAAAGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156959.2 |
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| CDS-3UTR TCA 90 bp | TTTTGTTCTGTTCATCAACCTGTGAACTGTGGAGGGGATATAAAGGGAAACAGCAGAACAGCACAGACATaGTCTCAGCATTGCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: FCSVHQPVNCGGDIKGNSRTAQT*SQHCCM Trigger: CATGCAGCAATGCTGAGATCATGTCTGTGCTGTTCT...GCTGTTTCCCTTTATATCCCCTCCACAGTTCACAGGTTGATGAACAGAACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR TCA 90 bp | TGGTTTTGGCACAAGCATAAACATACAGAGAAGAGGCTAGTCTTCTCAGACCAAAGGTTGATGTTGATTTaGGAGATGGCTCCCAATCGG | + |
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Preference number: 4 (lower is better) Translates to: WFWHKHKHTEKRLVFSDQRLMLI*EMAPNR Trigger: CCGATTGGGAGCCATCTCTCAAATCAACATCAACCT...TTGGTCTGAGAAGACTAGCCTCTTCTCTGTATGTTTATGCTTGTGCCAAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR TCA 90 bp | AGTTCTGTGAAAGGTGGGCTGCGGACTACAATTCAACACACATTTGCTTTACTTGTAGATACCCCGCAGTaGCAACCAATAAGGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: SSVKGGLRTTIQHTFALLVDTPQ*QPIRLM Trigger: CATCAACCTTATTGGTTGTCACTGCGGGGTATCTAC...AAGTAAAGCAAATGTGTGTTGAATTGTAGTCCGCAGCCCACCTTTCACAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR GCA 90 bp | TGTTCATCAACCTGTGAACTGTGGAGGGGATATAAAGGGAAACAGCAGAGAAAATCTGGTAGATGGCAATaGAGTGCTCAACAGACATGG | + |
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Preference number: 4 (lower is better) Translates to: CSSTCELWRGYKGKQQRKSGRWQ*SAQQTW Trigger: CCATGTCTGTTGAGCACTGCATTGCCATCTACCAGA...TTTTCTCTGCTGTTTCCCTTTATATCCCCTCCACAGTTCACAGGTTGATGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | GAAAAATCAAGAGCATCTGAAATTACACATAACTCAGGAACCTGCAGGCAGTGTAGAACACCCGGTAGCTaGCTTGGTCAAAGTACTTGC | + |
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Preference number: 4 (lower is better) Translates to: EKSRASEITHNSGTCRQCRTPGS*LGQSTC Trigger: GCAAGTACTTTGACCAAGCCAGCTACCGGGTGTTCT...ACACTGCCTGCAGGTTCCTGAGTTATGTGTAATTTCAGATGCTCTTGATTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | TGGTTTTGGCACAAGCATAAACATACAGAGAAGAGGCTAGTCTTCTCAGACCAAAAACAGAGCCTTCTGTaGATTCCTCATCCCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: WFWHKHKHTEKRLVFSDQKQSLL*IPHPPE Trigger: TTCTGGGGGATGAGGAATCCACAGAAGGCTCTGTTT...TTGGTCTGAGAAGACTAGCCTCTTCTCTGTATGTTTATGCTTGTGCCAAAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR TCA 90 bp | TGTTCATCAACCTGTGAACTGTGGAGGGGATATAAAGGGAAACAGCAGAGAAAACTTTTGCATTGGAAATaGTGGTGGCAATGTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: CSSTCELWRGYKGKQQRKLLHWK*WWQCPE Trigger: CTCTGGACATTGCCACCATCATTTCCAATGCAAAAG...TTTTCTCTGCTGTTTCCCTTTATATCCCCTCCACAGTTCACAGGTTGATGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR GCA 90 bp | AGTTCTGTGAAAGGTGGGCTGCGGACTACAATTCAACACACATTTGCTTTACTTCTTGGTCAAAGTACTTaGCAGTATATGCCATCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SSVKGGLRTTIQHTFALLLGQST*QYMPSH Trigger: GTGGGATGGCATATACTGGCAAGTACTTTGACCAAG...AAGTAAAGCAAATGTGTGTTGAATTGTAGTCCGCAGCCCACCTTTCACAGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | GAAAAATCAAGAGCATCTGAAATTACACATAACTCAGGAACCTGCAGGCAGTGTAGTGCTCAACAGACATaGAGCTACTGTGTCCAATGC | + |
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Preference number: 4 (lower is better) Translates to: EKSRASEITHNSGTCRQCSAQQT*SYCVQC Trigger: GCATTGGACACAGTAGCTCCATGTCTGTTGAGCACT...ACACTGCCTGCAGGTTCCTGAGTTATGTGTAATTTCAGATGCTCTTGATTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | GAAAAATCAAGAGCATCTGAAATTACACATAACTCAGGAACCTGCAGGCAGTGTAACGCTTCTGGTAGATaGCAATGCAGTGCTCAACAG | + |
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Preference number: 4 (lower is better) Translates to: EKSRASEITHNSGTCRQCNASGR*QCSAQQ Trigger: CTGTTGAGCACTGCATTGCCATCTACCAGAAGCGTT...ACACTGCCTGCAGGTTCCTGAGTTATGTGTAATTTCAGATGCTCTTGATTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | ACAAAGGTGTTAACTGGTTTTGCCTTTAAGGAGAACAAAGCGCAATCATCATTTCGCATCCTCAACATTTaGCATGCCTCGGGCCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: TKVLTGFAFKENKAQSSFRILNI*HASGLE Trigger: TTCAAGGCCCGAGGCATGCCAAATGTTGAGGATGCG...AAATGATGATTGCGCTTTGTTCTCCTTAAAGGCAAAACCAGTTAACACCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | GAAAAATCAAGAGCATCTGAAATTACACATAACTCAGGAACCTGCAGGCAGTGTTTGTCATTGTCACTATaGCGGACAACCTTGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: EKSRASEITHNSGTCRQCLSLSL*RTTLAC Trigger: ACAGGCCAAGGTTGTCCGCCATAGTGACAATGACAA...ACACTGCCTGCAGGTTCCTGAGTTATGTGTAATTTCAGATGCTCTTGATTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR TCA 90 bp | TTTTGTTCTGTTCATCAACCTGTGAACTGTGGAGGGGATATAAAGGGAAACAGCGTCCTCAATAGGGGGTaGTGGTACAAGAATTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: FCSVHQPVNCGGDIKGNSVLNRG*WYKNFV Trigger: AACAAAATTCTTGTACCATCACCCCCTATTGAGGAC...GCTGTTTCCCTTTATATCCCCTCCACAGTTCACAGGTTGATGAACAGAACAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR TCA 90 bp | AGTTCTGTGAAAGGTGGGCTGCGGACTACAATTCAACACACATTTGCTTTACTTCAATACAACACTGGATaGATCTCTCTGGGTGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SSVKGGLRTTIQHTFALLQYNTG*ISLGVL Trigger: AAGAACACCCAGAGAGATTCATCCAGTGTTGTATTG...AAGTAAAGCAAATGTGTGTTGAATTGTAGTCCGCAGCCCACCTTTCACAGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR GCA 90 bp | TTTTGTTCTGTTCATCAACCTGTGAACTGTGGAGGGGATATAAAGGGAAACAGCAGCTACTGTGTCCAATaGGGTTCACATCAAAGATTG | + |
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Preference number: 4 (lower is better) Translates to: FCSVHQPVNCGGDIKGNSSYCVQ*GSHQRL Trigger: CAATCTTTGATGTGAACCGCATTGGACACAGTAGCT...GCTGTTTCCCTTTATATCCCCTCCACAGTTCACAGGTTGATGAACAGAACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR GCA 90 bp | AGTTCTGTGAAAGGTGGGCTGCGGACTACAATTCAACACACATTTGCTTTACTTAATCTAGTGCTTCATTaGATCTTCCACTACGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SSVKGGLRTTIQHTFALLNLVLH*IFHYEA Trigger: TGCCTCGTAGTGGAAGATGCAATGAAGCACTAGATT...AAGTAAAGCAAATGTGTGTTGAATTGTAGTCCGCAGCCCACCTTTCACAGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | GAAAAATCAAGAGCATCTGAAATTACACATAACTCAGGAACCTGCAGGCAGTGTCTCAGCATTGCTGCATaGTATGAGATAGCTAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: EKSRASEITHNSGTCRQCLSIAA*YEIASG Trigger: ACCACTAGCTATCTCATACCATGCAGCAATGCTGAG...ACACTGCCTGCAGGTTCCTGAGTTATGTGTAATTTCAGATGCTCTTGATTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | ACAAGTGATCATAACTGCTTTTGTTCTGTTCATCAACCTGTGAACTGTGGAGGGATTGCAGTTTCTGCTTaGCTGGTACGAATAAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: TSDHNCFCSVHQPVNCGGIAVSA*LVRIKH Trigger: GTGCTTTATTCGTACCAGCCAAGCAGAAACTGCAAT...CCCTCCACAGTTCACAGGTTGATGAACAGAACAAAAGCAGTTATGATCACTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | ACAAAGGTGTTAACTGGTTTTGCCTTTAAGGAGAACAAAGCGCAATCATCATTTTATGGCGGACAACCTTaGCCTGTCCAATCTGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: TKVLTGFAFKENKAQSSFYGGQP*PVQSER Trigger: CCTTTCAGATTGGACAGGCCAAGGTTGTCCGCCATA...AAATGATGATTGCGCTTTGTTCTCCTTAAAGGCAAAACCAGTTAACACCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR TCA 90 bp | GAAAAATCAAGAGCATCTGAAATTACACATAACTCAGGAACCTGCAGGCAGTGTAAACCACATGCTCTTTaGGTAGACACCTTGTCATCA | + |
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Preference number: 4 (lower is better) Translates to: EKSRASEITHNSGTCRQCKPHAL*VDTLSS Trigger: TGATGACAAGGTGTCTACTCAAAGAGCATGTGGTTT...ACACTGCCTGCAGGTTCCTGAGTTATGTGTAATTTCAGATGCTCTTGATTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR GCA 90 bp | ACAAAGGTGTTAACTGGTTTTGCCTTTAAGGAGAACAAAGCGCAATCATCATTTAACACAATTGGGAATTaGTCGGAACATGGCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: TKVLTGFAFKENKAQSSFNTIGN*SEHGQV Trigger: GACCTGGCCATGTTCCGAGCAATTCCCAATTGTGTT...AAATGATGATTGCGCTTTGTTCTCCTTAAAGGCAAAACCAGTTAACACCTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR GCA 90 bp | GAAAAATCAAGAGCATCTGAAATTACACATAACTCAGGAACCTGCAGGCAGTGTAGGCACATCCATTACTaGCAGGTTATGAACCACAAT | + |
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Preference number: 4 (lower is better) Translates to: EKSRASEITHNSGTCRQCRHIHY*QVMNHN Trigger: ATTGTGGTTCATAACCTGGCAGTAATGGATGTGCCT...ACACTGCCTGCAGGTTCCTGAGTTATGTGTAATTTCAGATGCTCTTGATTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | AGTTCTGTGAAAGGTGGGCTGCGGACTACAATTCAACACACATTTGCTTTACTTTCTTTCTTTTGGCATTaGCCTTCCATACCAACTTTC | + |
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Preference number: 4 (lower is better) Translates to: SSVKGGLRTTIQHTFALLSFFWH*PSIPTF Trigger: GAAAGTTGGTATGGAAGGCCAATGCCAAAAGAAAGA...AAGTAAAGCAAATGTGTGTTGAATTGTAGTCCGCAGCCCACCTTTCACAGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | AGTTCTGTGAAAGGTGGGCTGCGGACTACAATTCAACACACATTTGCTTTACTTAGAAAACAACACAATTaGGAATTGCTCGGAACATGG | + |
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Preference number: 4 (lower is better) Translates to: SSVKGGLRTTIQHTFALLRKQHN*ELLGTW Trigger: CCATGTTCCGAGCAATTCCCAATTGTGTTGTTTTCT...AAGTAAAGCAAATGTGTGTTGAATTGTAGTCCGCAGCCCACCTTTCACAGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | ACAAGTGATCATAACTGCTTTTGTTCTGTTCATCAACCTGTGAACTGTGGAGGGCTGGATGAATCTCTCTaGGTGTTCTTTCTTGAATAT | + |
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Preference number: 4 (lower is better) Translates to: TSDHNCFCSVHQPVNCGGLDESL*VFFLEY Trigger: ATATTCAAGAAAGAACACCCAGAGAGATTCATCCAG...CCCTCCACAGTTCACAGGTTGATGAACAGAACAAAAGCAGTTATGATCACTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | GAAAAATCAAGAGCATCTGAAATTACACATAACTCAGGAACCTGCAGGCAGTGTGGAGACGGCATCACTTaGATAGAAAACAACACAATT | + |
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Preference number: 4 (lower is better) Translates to: EKSRASEITHNSGTCRQCGDGIT*IENNTI Trigger: AATTGTGTTGTTTTCTATCCAAGTGATGCCGTCTCC...ACACTGCCTGCAGGTTCCTGAGTTATGTGTAATTTCAGATGCTCTTGATTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR GCA 90 bp | AGTTCTGTGAAAGGTGGGCTGCGGACTACAATTCAACACACATTTGCTTTACTTATATGTCAGAAAAATTaGAGTTCTTGGTGTCACTAC | + |
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Preference number: 4 (lower is better) Translates to: SSVKGGLRTTIQHTFALLICQKN*SSWCHY Trigger: GTAGTGACACCAAGAACTGCAATTTTTCTGACATAT...AAGTAAAGCAAATGTGTGTTGAATTGTAGTCCGCAGCCCACCTTTCACAGAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CCA 90 bp | ACAAAGGTGTTAACTGGTTTTGCCTTTAAGGAGAACAAAGCGCAATCATCATTTGTACAAGAATTTTGTTaGTCTGTATCTGGCTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: TKVLTGFAFKENKAQSSFVQEFC*SVSGSQ Trigger: TTGAGAGCCAGATACAGACCAACAAAATTCTTGTAC...AAATGATGATTGCGCTTTGTTCTCCTTAAAGGCAAAACCAGTTAACACCTTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS TCA 90 bp | TTTGGCAACCACAGCAGTGGGCTTGCCTCTCACTTGAGCTGCCTGTaGGAATACATGGCACAGGGTCTTGACATCACGGCCATCCACCAC | + |
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Preference number: 5 (lower is better) Translates to: FGNHSSGLASHLSCL*EYMAQGLDITAIHH Trigger: GTGGTGGATGGCCGTGATGTCAAGACCCTGTGCCATGTATTCTCACAGGCAGCTCAAGTGAGAGGCAAGCCCACTGCTGTGGTTGCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS TCA 90 bp | TGCCTCTCACTTGAGCTGCCTGTGAGAATACATGGCACAGGGTCTTaGCATCACGGCCATCCACCACGTAAGTATTCCACCCAAAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: CLSLELPVRIHGTGS*HHGHPPRKYSTQRL Trigger: AAGCCTTTGGGTGGAATACTTACGTGGTGGATGGCCGTGATGTCAAGACCCTGTGCCATGTATTCTCACAGGCAGCTCAAGTGAGAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CAA 90 bp | TGGTTTTGGCACAAGCATAAACATACAGAGAAGAGGCTAGTCTTCTCAGACCAACGGGCCTTGAAGGTTTaGGCAACCACAGCAGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: WFWHKHKHTEKRLVFSDQRALKV*ATTAVG Trigger: GCCCACTGCTGTGGTTGCCAAAACCTTCAAGGCCCG...TTGGTCTGAGAAGACTAGCCTCTTCTCTGTATGTTTATGCTTGTGCCAAAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS TCA 90 bp | TCATTGCATCTTCCACTACGAGGCACATCCATTACTGCCAGGTTATaGACCACAATGTTAGGCTCCATGGAGACTGCTGCACAGACAGCT | + |
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Preference number: 5 (lower is better) Translates to: SLHLPLRGTSITARL*TTMLGSMETAAQTA Trigger: AGCTGTCTGTGCAGCAGTCTCCATGGAGCCTAACATTGTGGTTCATAACCTGGCAGTAATGGATGTGCCTCGTAGTGGAAGATGCAATGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CAA 90 bp | TGTTCATCAACCTGTGAACTGTGGAGGGGATATAAAGGGAAACAGCAGAGAAAACACCCGGTAGCTGGCTaGGTCAAAGTACTTGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: CSSTCELWRGYKGKQQRKHPVAG*VKVLAS Trigger: ACTGGCAAGTACTTTGACCAAGCCAGCTACCGGGTG...TTTTCTCTGCTGTTTCCCTTTATATCCCCTCCACAGTTCACAGGTTGATGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CAA 90 bp | TTTTGTTCTGTTCATCAACCTGTGAACTGTGGAGGGGATATAAAGGGAAACAGCGCTTGGTCAAAGTACTaGCCAGTATATGCCATCCCA | + |
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Preference number: 5 (lower is better) Translates to: FCSVHQPVNCGGDIKGNSAWSKY*PVYAIP Trigger: TGGGATGGCATATACTGGCAAGTACTTTGACCAAGC...GCTGTTTCCCTTTATATCCCCTCCACAGTTCACAGGTTGATGAACAGAACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CAA 90 bp | GAAAAATCAAGAGCATCTGAAATTACACATAACTCAGGAACCTGCAGGCAGTGTCAACACAATTGGGAATaGCTCGGAACATGGCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: EKSRASEITHNSGTCRQCQHNWE*LGTWPG Trigger: ACCTGGCCATGTTCCGAGCAATTCCCAATTGTGTTG...ACACTGCCTGCAGGTTCCTGAGTTATGTGTAATTTCAGATGCTCTTGATTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS CCA 90 bp | CATTGTATAAAAGAACAGCACAGACATGATCTCAGCATTGCTGCATaGTATGAGATAGCTAGTGGTCGAGGAATTTGTGGCCTTGATGGA | + |
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Preference number: 5 (lower is better) Translates to: HCIKEQHRHDLSIAA*YEIASGRGICGLDG Trigger: TCCATCAAGGCCACAAATTCCTCGACCACTAGCTATCTCATACCATGCAGCAATGCTGAGATCATGTCTGTGCTGTTCTTTTATACAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010127.12 ENSMUST00000156959.2 |
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| CDS-3UTR CAA 90 bp | AGTTCTGTGAAAGGTGGGCTGCGGACTACAATTCAACACACATTTGCTTTACTTCAAACCACATGCTCTTaGAGTAGACACCTTGTCATC | + |
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Preference number: 5 (lower is better) Translates to: SSVKGGLRTTIQHTFALLQTTCS*SRHLVI Trigger: GATGACAAGGTGTCTACTCAAAGAGCATGTGGTTTG...AAGTAAAGCAAATGTGTGTTGAATTGTAGTCCGCAGCCCACCTTTCACAGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CAA 90 bp | TGTTCATCAACCTGTGAACTGTGGAGGGGATATAAAGGGAAACAGCAGAGAAAAAAATCTAGTGCTTCATaGCATCTTCCACTACGAGGC | + |
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Preference number: 5 (lower is better) Translates to: CSSTCELWRGYKGKQQRKKSSAS*HLPLRG Trigger: GCCTCGTAGTGGAAGATGCAATGAAGCACTAGATTT...TTTTCTCTGCTGTTTCCCTTTATATCCCCTCCACAGTTCACAGGTTGATGAACA 43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CAA 90 bp | TGTTCATCAACCTGTGAACTGTGGAGGGGATATAAAGGGAAACAGCAGAGAAAATGGAGACGGCATCACTaGGATAGAAAACAACACAAT | + |
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Preference number: 5 (lower is better) Translates to: CSSTCELWRGYKGKQQRKWRRHH*DRKQHN Trigger: ATTGTGTTGTTTTCTATCCAAGTGATGCCGTCTCCA...TTTTCTCTGCTGTTTCCCTTTATATCCCCTCCACAGTTCACAGGTTGATGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS GCA 90 bp | CTTGGCCTGTCCAATCTGAAAGGTTTCTTGAGTGGTGTAAATAATTaGAGTTTCTGCTTGGCTGGTACGAATAAAGCACATTTCCTTAGT | + |
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Preference number: 5 (lower is better) Translates to: LGLSNLKGFLSGVNN*SFCLAGTNKAHFLS Trigger: ACTAAGGAAATGTGCTTTATTCGTACCAGCCAAGCAGAAACTGCAATTATTTACACCACTCAAGAAACCTTTCAGATTGGACAGGCCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CAA 90 bp | GAAAAATCAAGAGCATCTGAAATTACACATAACTCAGGAACCTGCAGGCAGTGTAATTGCAGTTTCTGCTaGGCTGGTACGAATAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: EKSRASEITHNSGTCRQCNCSFC*AGTNKA Trigger: TGCTTTATTCGTACCAGCCAAGCAGAAACTGCAATT...ACACTGCCTGCAGGTTCCTGAGTTATGTGTAATTTCAGATGCTCTTGATTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS GCA 90 bp | TCCAATCTGAAAGGTTTCTTGAGTGGTGTAAATAATTGCAGTTTCTaGTTGGCTGGTACGAATAAAGCACATTTCCTTAGTATTGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SNLKGFLSGVNNCSF*LAGTNKAHFLSIGC Trigger: GCAGCCAATACTAAGGAAATGTGCTTTATTCGTACCAGCCAAGCAGAAACTGCAATTATTTACACCACTCAAGAAACCTTTCAGATTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CAA 90 bp | ACAAAGGTGTTAACTGGTTTTGCCTTTAAGGAGAACAAAGCGCAATCATCATTTGAAAAATTGCAGTTCTaGGTGTCACTACCCAGCACA | + |
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Preference number: 5 (lower is better) Translates to: TKVLTGFAFKENKAQSSFEKLQF*VSLPST Trigger: TGTGCTGGGTAGTGACACCAAGAACTGCAATTTTTC...AAATGATGATTGCGCTTTGTTCTCCTTAAAGGCAAAACCAGTTAACACCTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CAA 90 bp | ACAAAGGTGTTAACTGGTTTTGCCTTTAAGGAGAACAAAGCGCAATCATCATTTCCAATAACTATGACCTaGTCATTGTCACTATGGCGG | + |
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Preference number: 5 (lower is better) Translates to: TKVLTGFAFKENKAQSSFPITMT*SLSLWR Trigger: CCGCCATAGTGACAATGACAAGGTCATAGTTATTGG...AAATGATGATTGCGCTTTGTTCTCCTTAAAGGCAAAACCAGTTAACACCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CAA 90 bp | ACAAAGGTGTTAACTGGTTTTGCCTTTAAGGAGAACAAAGCGCAATCATCATTTGGTACAAGAATTTTGTaGGTCTGTATCTGGCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: TKVLTGFAFKENKAQSSFGTRIL*VCIWLS Trigger: TGAGAGCCAGATACAGACCAACAAAATTCTTGTACC...AAATGATGATTGCGCTTTGTTCTCCTTAAAGGCAAAACCAGTTAACACCTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS-3UTR CAA 90 bp | ACAAAGGTGTTAACTGGTTTTGCCTTTAAGGAGAACAAAGCGCAATCATCATTTCACATTTACCATGTTTaGTTCAGCAATACAACACTG | + |
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Preference number: 5 (lower is better) Translates to: TKVLTGFAFKENKAQSSFHIYHV*FSNTTL Trigger: CAGTGTTGTATTGCTGAACAAAACATGGTAAATGTG...AAATGATGATTGCGCTTTGTTCTCCTTAAAGGCAAAACCAGTTAACACCTTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS GCA 72 bp | CGGATTCGCAGGCGGTTGGCCATGTCCCGCAACACCTaGAATGTCTTCTCATCAGGTCCAGCGTTGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RIRRRLAMSRNT*NVFSSGPALWA Trigger: GGCCCACAACGCTGGACCTGATGAGAAGACATTGCAGGTGTTGCGGGACATGGCCAACCGCCTGCGAATCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010127.12 ENSMUST00000156959.2 |
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| CDS CAA 72 bp | CGCAACACCTGCAATGTCTTCTCATCAGGTCCAGCGTaGTGGGCCATCCCACTGCTTGCCTCAGCTTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: RNTCNVFSSGPA*WAIPLLASASD Trigger: GTCGGAAGCTGAGGCAAGCAGTGGGATGGCCCACAACGCTGGACCTGATGAGAAGACATTGCAGGTGTTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010127.12 ENSMUST00000156959.2 |
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| CDS TCA 72 bp | CACAGCAGTGGGCTTGCCTCTCACTTGAGCTGCCTGTaGGAATACATGGCACAGGGTCTTGACATCACGGCC | + |
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Preference number: 6 (lower is better) Translates to: HSSGLASHLSCL*EYMAQGLDITA Trigger: GGCCGTGATGTCAAGACCCTGTGCCATGTATTCTCACAGGCAGCTCAAGTGAGAGGCAAGCCCACTGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS CAA 90 bp | GTGGTCGAGGAATTTGTGGCCTTGATGGAACGGATTCGCAGGCGGTaGGCCATGTCCCGCAACACCTGCAATGTCTTCTCATCAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: VVEEFVALMERIRRR*AMSRNTCNVFSSGP Trigger: TGGACCTGATGAGAAGACATTGCAGGTGTTGCGGGACATGGCCAACCGCCTGCGAATCCGTTCCATCAAGGCCACAAATTCCTCGACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010127.12 ENSMUST00000156959.2 |
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| CDS CAA 72 bp | GAATTTGTGGCCTTGATGGAACGGATTCGCAGGCGGTaGGCCATGTCCCGCAACACCTGCAATGTCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: EFVALMERIRRR*AMSRNTCNVFS Trigger: TGAGAAGACATTGCAGGTGTTGCGGGACATGGCCAACCGCCTGCGAATCCGTTCCATCAAGGCCACAAATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010127.12 ENSMUST00000156959.2 |
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| CDS TCA 72 bp | CTTGAGCTGCCTGTGAGAATACATGGCACAGGGTCTTaGCATCACGGCCATCCACCACGTAAGTATTCCACC | + |
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Preference number: 6 (lower is better) Translates to: LELPVRIHGTGS*HHGHPPRKYST Trigger: GGTGGAATACTTACGTGGTGGATGGCCGTGATGTCAAGACCCTGTGCCATGTATTCTCACAGGCAGCTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS TCA 72 bp | CTTGAGCTGCCTGTGAGAATACATGGCACAGGGTCTTaGCATCACGGCCATCCACCACGTAAGTATTCCACA | + |
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Preference number: 6 (lower is better) Translates to: LELPVRIHGTGS*HHGHPPRKYST Trigger: TGTGGAATACTTACGTGGTGGATGGCCGTGATGTCAAGACCCTGTGCCATGTATTCTCACAGGCAGCTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156959.2 |
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| CDS TCA 72 bp | CTTCCACTACGAGGCACATCCATTACTGCCAGGTTATaGACCACAATGTTAGGCTCCATGGAGACTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LPLRGTSITARL*TTMLGSMETAA Trigger: TGCAGCAGTCTCCATGGAGCCTAACATTGTGGTTCATAACCTGGCAGTAATGGATGTGCCTCGTAGTGGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS GCA 72 bp | GATTTGAGAGATGGCTCCCAATCGGATCTGATCAAATaGTCGGGTGAAAAAGGCAGCGAAGGAGTAAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: DLRDGSQSDLIK*SGEKGSEGVSK Trigger: TTTGCTTACTCCTTCGCTGCCTTTTTCACCCGAGCATTTGATCAGATCCGATTGGGAGCCATCTCTCAAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS CCA 72 bp | CGAAGGAGTAAGCAAAAACAATGGTCCGGTCACGGGTaGAGCATCCTAGAGCCACATTTACCATGTTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: RRSKQKQWSGHG*SILEPHLPCFV Trigger: AACAAAACATGGTAAATGTGGCTCTAGGATGCTCCACCCGTGACCGGACCATTGTTTTTGCTTACTCCTTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS CCA 72 bp | AAAGAACAGCACAGACATGATCTCAGCATTGCTGCATaGTATGAGATAGCTAGTGGTCGAGGAATTTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: KEQHRHDLSIAA*YEIASGRGICG Trigger: GCCACAAATTCCTCGACCACTAGCTATCTCATACCATGCAGCAATGCTGAGATCATGTCTGTGCTGTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010127.12 ENSMUST00000156959.2 |
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| CDS TCA 72 bp | GGGGGCGAAGTCATACATATATTCATGATGTTAATTTaGGGCGAGTCCTCAATAGGGGGTGATGGTACAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GGEVIHIFMMLI*GESSIGGDGTR Trigger: TCTTGTACCATCACCCCCTATTGAGGACTCGCCTCAAATTAACATCATGAATATATGTATGACTTCGCCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS GCA 72 bp | TCCAATCTGAAAGGTTTCTTGAGTGGTGTAAATAATTaGAGTTTCTGCTTGGCTGGTACGAATAAAGCACAT | + |
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Preference number: 6 (lower is better) Translates to: SNLKGFLSGVNN*SFCLAGTNKAH Trigger: ATGTGCTTTATTCGTACCAGCCAAGCAGAAACTGCAATTATTTACACCACTCAAGAAACCTTTCAGATTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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| CDS CAA 72 bp | TGTTCTTTCTTGAATATGTCAGAAAAATTGCAGTTCTaGGTGTCACTACCCAGCACAATAACTCTGTCATTT | + |
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Preference number: 6 (lower is better) Translates to: CSFLNMSEKLQF*VSLPSTITLSF Trigger: AAATGACAGAGTTATTGTGCTGGGTAGTGACACCAAGAACTGCAATTTTTCTGACATATTCAAGAAAGAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010127.12 |
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