RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TKFC (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034371

Ensembl transcript IDs: ENSMUST00000037678.7, ENSMUST00000235285.2, ENSMUST00000236121.2, ENSMUST00000236478.2, ENSMUST00000236607.2, ENSMUST00000236950.2, ENSMUST00000237788.2

Found 454 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGGCATCCATGGCAGCAGACCAGGTTGGGAGGTCAGTCTTGGCCTTaGGAGGCTGGGCAGCTGCAGTCAGGAACAGGCCATAGAGCGCCC +
Preference number: 1 (lower is better)
Translates to: RHPWQQTRLGGQSWP*EAGQLQSGTGHRAP
Trigger: GGGCGCTCTATGGCCTGTTCCTGACTGCAGCTGCCCAGCCTCTCAAGGCCAAGACTGACCTCCCAACCTGGTCTGCTGCCATGGATGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR GCA 90 bp ATGAAGCGGGCAGGGGCTCCTGGGAACGGTCAGCGATGCGGTCTCTaGTCCCTCAGAAGTTCTGCTGTACTGGGGCTCCTGGCTGGTTTC +
Preference number: 1 (lower is better)
Translates to: MKRAGAPGNGQRCGL*SLRSSAVLGLLAGF
Trigger: GAAACCAGCCAGGAGCCCCAGTACAGCAGAACTTCTGAGGGAGCAGAGACCGCATCGCTGACCGTTCCCAGGAGCCCCTGCCCGCTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR GCA 90 bp CTTGGGGCTTCCCTGAAAGATCTGGTGGCTTGGCTGGGTTCACCCTaGAGGTTGAGGGTCTGTCTGAGCAGCTCGGGCCTGGTGTGCCTC +
Preference number: 1 (lower is better)
Translates to: LGASLKDLVAWLGSP*RLRVCLSSSGLVCL
Trigger: GAGGCACACCAGGCCCGAGCTGCTCAGACAGACCCTCAACCTGCAGGGTGAACCCAGCCAAGCCACCAGATCTTTCAGGGAAGCCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR GCA 90 bp TGGGAGGAGACTGGCCCCTGGGCTCTTCCAGGCTTGGAACTCCTGTaGTGCTGCCCACAGAGAATCCAGCATTGTCCTGTCTCCTGGTGC +
Preference number: 1 (lower is better)
Translates to: WEETGPWALPGLELL*CCPQRIQHCPVSWC
Trigger: GCACCAGGAGACAGGACAATGCTGGATTCTCTGTGGGCAGCAGCACAGGAGTTCCAAGCCTGGAAGAGCCCAGGGGCCAGTCTCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR CCA 90 bp TTACACCTCCTGCTGCAGTGGCTTCAGGGGCTTCTGGAGGCTCTGTaGGAGCTGCCCGAATCCGCTTCCTCCCAGTCACAGAGACCTTGG +
Preference number: 1 (lower is better)
Translates to: LHLLLQWLQGLLEAL*ELPESASSQSQRPW
Trigger: CCAAGGTCTCTGTGACTGGGAGGAAGCGGATTCGGGCAGCTCCCACAGAGCCTCCAGAAGCCCCTGAAGCCACTGCAGCAGGAGGTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR CCA 90 bp CCAGCACAAGTGCCATCTGCTTTGATGTTACACCTCCTGCTGCAGTaGCTTCAGGGGCTTCTGGAGGCTCTGTGGGAGCTGCCCGAATCC +
Preference number: 1 (lower is better)
Translates to: PAQVPSALMLHLLLQ*LQGLLEALWELPES
Trigger: GGATTCGGGCAGCTCCCACAGAGCCTCCAGAAGCCCCTGAAGCCACTGCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR CCA 90 bp TTAGTCAGGACTGGGAGGAGACTGGCCCCTGGGCTCTTCCAGGCTTaGAACTCCTGTGCTGCTGCCCACAGAGAATCCAGCATTGTCCTG +
Preference number: 1 (lower is better)
Translates to: LVRTGRRLAPGLFQA*NSCAAAHRESSIVL
Trigger: CAGGACAATGCTGGATTCTCTGTGGGCAGCAGCACAGGAGTTCCAAGCCTGGAAGAGCCCAGGGGCCAGTCTCCTCCCAGTCCTGACTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR TCA 90 bp CACCAGCAGCCCTGTCCAAGGCATTCAGGTGCTCCTCCAGTCCGATaGGGGTGGTGCATATCCGATCCAGCACAAGTGCCATCTGCTTTG +
Preference number: 1 (lower is better)
Translates to: HQQPCPRHSGAPPVR*GWCISDPAQVPSAL
Trigger: CAAAGCAGATGGCACTTGTGCTGGATCGGATATGCACCACCCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGACAGGGCTGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR TCA 90 bp ACCTGGGCAGGGCTGGTTAGAGATGGGCCTTCCTTTAGCCAGCCCTaGATGGCTTTGGCAGCACGGCTATGGGTAGAACCACAATCCCCA +
Preference number: 1 (lower is better)
Translates to: TWAGLVRDGPSFSQP*MALAARLWVEPQSP
Trigger: TGGGGATTGTGGTTCTACCCATAGCCGTGCTGCCAAAGCCATTCAGGGCTGGCTAAAGGAAGGCCCATCTCTAACCAGCCCTGCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR CCA 90 bp CTGCTGTACTGGGGCTCCTGGCTGGTTTCAGCAACAGACTTCTCTTaGGCCAGAGACCCAACCTTGCTACTCCAGTTGCAGGCTCTCGCT +
Preference number: 1 (lower is better)
Translates to: LLYWGSWLVSATDFS*ARDPTLLLQLQALA
Trigger: AGCGAGAGCCTGCAACTGGAGTAGCAAGGTTGGGTCTCTGGCCCAAGAGAAGTCTGTTGCTGAAACCAGCCAGGAGCCCCAGTACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CCA 90 bp GATGCGGTCTCTGCTCCCTCAGAAGTTCTGCTGTACTGGGGCTCCTaGCTGGTTTCAGCAACAGACTTCTCTTGGGCCAGAGACCCAACC +
Preference number: 1 (lower is better)
Translates to: DAVSAPSEVLLYWGS*LVSATDFSWARDPT
Trigger: GGTTGGGTCTCTGGCCCAAGAGAAGTCTGTTGCTGAAACCAGCCAGGAGCCCCAGTACAGCAGAACTTCTGAGGGAGCAGAGACCGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CCA 90 bp ACGGTCAGCGATGCGGTCTCTGCTCCCTCAGAAGTTCTGCTGTACTaGGGCTCCTGGCTGGTTTCAGCAACAGACTTCTCTTGGGCCAGA +
Preference number: 1 (lower is better)
Translates to: TVSDAVSAPSEVLLY*GSWLVSATDFSWAR
Trigger: TCTGGCCCAAGAGAAGTCTGTTGCTGAAACCAGCCAGGAGCCCCAGTACAGCAGAACTTCTGAGGGAGCAGAGACCGCATCGCTGACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR TCA 90 bp CTTCCCAAGGTCCCCTCCCCTACAAGAGTCCTTGGCTCTGTGAGATaGCATTTGGAAGGACTTGAGCCTGGCGAGGCTCTGCCAGTTCTG +
Preference number: 1 (lower is better)
Translates to: LPKVPSPTRVLGSVR*HLEGLEPGEALPVL
Trigger: CAGAACTGGCAGAGCCTCGCCAGGCTCAAGTCCTTCCAAATGTCATCTCACAGAGCCAAGGACTCTTGTAGGGGAGGGGACCTTGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CCA 90 bp TCTCCAGCAGCAGGACAGACAATCTGGAGAGTACCTGGGCAGGGCTaGTTAGAGATGGGCCTTCCTTTAGCCAGCCCTGAATGGCTTTGG +
Preference number: 1 (lower is better)
Translates to: SPAAGQTIWRVPGQG*LEMGLPLASPEWLW
Trigger: CCAAAGCCATTCAGGGCTGGCTAAAGGAAGGCCCATCTCTAACCAGCCCTGCCCAGGTACTCTCCAGATTGTCTGTCCTGCTGCTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR CCA 90 bp CCAGCATTGTCCTGTCTCCTGGTGCAGCCTTTCCATACTTCTGCATaGACTCTAAGCCGGCATCCATGGCAGCAGACCAGGTTGGGAGGT +
Preference number: 1 (lower is better)
Translates to: PALSCLLVQPFHTSA*TLSRHPWQQTRLGG
Trigger: ACCTCCCAACCTGGTCTGCTGCCATGGATGCCGGCTTAGAGTCCATGCAGAAGTATGGAAAGGCTGCACCAGGAGACAGGACAATGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR CCA 90 bp TTGGCCCAAGTGTCCCAAAGAAGCCAACCTTTGGCAGCACGGCTATaGGTAGAACCACAATCCCCATCACCAGCAGCCCTGTCCAAGGCA +
Preference number: 1 (lower is better)
Translates to: LAQVSQRSQPLAARL*VEPQSPSPAALSKA
Trigger: TGCCTTGGACAGGGCTGCTGGTGATGGGGATTGTGGTTCTACCCATAGCCGTGCTGCCAAAGGTTGGCTTCTTTGGGACACTTGGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR TCA 90 bp GATGAGGGTGGTGCATATCCGATCCAGCACAAGTGCCATCTGCTTTaGTGTTACACCTCCTGCTGCAGTGGCTTCAGGGGCTTCTGGAGG +
Preference number: 1 (lower is better)
Translates to: DEGGAYPIQHKCHLL*CYTSCCSGFRGFWR
Trigger: CCTCCAGAAGCCCCTGAAGCCACTGCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCTGGATCGGATATGCACCACCCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR GCA 90 bp GAATCCAGCATTGTCCTGTCTCCTGGTGCAGCCTTTCCATACTTCTaGATGGACTCTAAGCCGGCATCCATGGCAGCAGACCAGGTTGGG +
Preference number: 1 (lower is better)
Translates to: ESSIVLSPGAAFPYF*MDSKPASMAADQVG
Trigger: CCCAACCTGGTCTGCTGCCATGGATGCCGGCTTAGAGTCCATGCAGAAGTATGGAAAGGCTGCACCAGGAGACAGGACAATGCTGGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR GCA 90 bp ACTAGCTCTCCCAGCACCAGCTTCCATATTCTTGGTGGCCTCGGCTaGAGCTTCAGCACTCTTGACTGCTTTAGTCAGGACTGGGAGGAG +
Preference number: 1 (lower is better)
Translates to: TSSPSTSFHILGGLG*SFSTLDCFSQDWEE
Trigger: CTCCTCCCAGTCCTGACTAAAGCAGTCAAGAGTGCTGAAGCTGCAGCCGAGGCCACCAAGAATATGGAAGCTGGTGCTGGGAGAGCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR CCA 90 bp CTGGCAGATGTGGGAAGATATGCTATGGACCAGTCTCAGGAACCTTaGGGCTTCCCTGAAAGATCTGGTGGCTTGGCTGGGTTCACCCTG +
Preference number: 1 (lower is better)
Translates to: LADVGRYAMDQSQEP*GFPERSGGLAGFTL
Trigger: CAGGGTGAACCCAGCCAAGCCACCAGATCTTTCAGGGAAGCCCCAAGGTTCCTGAGACTGGTCCATAGCATATCTTCCCACATCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CCA 90 bp CCAGCCTGCCTGGTGAGGCTGTCTTTGCCAACAGCACAGGGCTCTTaGTGGTGGCTTTTGGCTTGCTGGTTCTCTATGTTCTTCTGGCTT +
Preference number: 1 (lower is better)
Translates to: PACLVRLSLPTAQGS*WWLLACWFSMFFWL
Trigger: AAGCCAGAAGAACATAGAGAACCAGCAAGCCAAAAGCCACCACCAAGAGCCCTGTGCTGTTGGCAAAGACAGCCTCACCAGGCAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR TCA 90 bp GCTGCCCGAATCCGCTTCCTCCCAGTCACAGAGACCTTGGCCATGTaGGGCCAGGCTTTTGCAGTAGTTTCAGCATCTATTAGCTTCAGC +
Preference number: 1 (lower is better)
Translates to: AARIRFLPVTETLAM*GQAFAVVSASISFS
Trigger: GCTGAAGCTAATAGATGCTGAAACTACTGCAAAAGCCTGGCCTCACATGGCCAAGGTCTCTGTGACTGGGAGGAAGCGGATTCGGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR TCA 90 bp AGCCCTGACTGGCCTAGAACTCAACTCTGTAGACCAGGCTGGCCTTaGACTCAGAGATCCACCAGCTTTTGCCTCCCGAGTGATGGGATT +
Preference number: 1 (lower is better)
Translates to: SPDWPRTQLCRPGWP*TQRSTSFCLPSDGI
Trigger: AATCCCATCACTCGGGAGGCAAAAGCTGGTGGATCTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTTGAGTTCTAGGCCAGTCAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR TCA 90 bp TATTTCCAGGAAAAATGCCACCAAGCCCTACTCCAGCCTGCCTGGTaGGGCTGTCTTTGCCAACAGCACAGGGCTCTTGGTGGTGGCTTT +
Preference number: 1 (lower is better)
Translates to: YFQEKCHQALLQPAW*GCLCQQHRALGGGF
Trigger: AAAGCCACCACCAAGAGCCCTGTGCTGTTGGCAAAGACAGCCTCACCAGGCAGGCTGGAGTAGGGCTTGGTGGCATTTTTCCTGGAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR GCA 90 bp AGTCCGATGAGGGTGGTGCATATCCGATCCAGCACAAGTGCCATCTaGTTTGATGTTACACCTCCTGCTGCAGTGGCTTCAGGGGCTTCT +
Preference number: 1 (lower is better)
Translates to: SPMRVVHIRSSTSAI*FDVTPPAAVASGAS
Trigger: AGAAGCCCCTGAAGCCACTGCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCTGGATCGGATATGCACCACCCTCATCGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR CCA 90 bp TCATGGAAGCGTCCAGATCCAGGAGCTCTGACTGATAGACAGGTATaGCTGCTGTCTCCCATTCTAGGTGGGGTAAGGCCAGGTGTAGAG +
Preference number: 1 (lower is better)
Translates to: SWKRPDPGALTDRQV*LLSPILGGVRPGVE
Trigger: CTCTACACCTGGCCTTACCCCACCTAGAATGGGAGACAGCAGCCATACCTGTCTATCAGTCAGAGCTCCTGGATCTGGACGCTTCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR TCA 90 bp CCCTACAAGAGTCCTTGGCTCTGTGAGATGACATTTGGAAGGACTTaGGCCTGGCGAGGCTCTGCCAGTTCTGTGGCAAGAATAGTGGGA +
Preference number: 1 (lower is better)
Translates to: PYKSPWLCEMTFGRT*AWRGSASSVARIVG
Trigger: TCCCACTATTCTTGCCACAGAACTGGCAGAGCCTCGCCAGGCTCAAGTCCTTCCAAATGTCATCTCACAGAGCCAAGGACTCTTGTAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR TCA 90 bp CACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTaGAGGATGTCCTGTTCCATGCAGAGGTTGGGTGTTAGGGGGAGG +
Preference number: 1 (lower is better)
Translates to: HLARYDLHGTVLKVW*RMSCSMQRLGVRGR
Trigger: CCTCCCCCTAACACCCAACCTCTGCATGGAACAGGACATCCTTCACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR TCA 90 bp TGGGCAACTGAGTGCGCTAAGGGCAGCAGAATGGAGTTTCTTTCATaGAAACAAGCTGAGGGGTGTGCCAAGGTGTGGCAAATGGCCTCA +
Preference number: 1 (lower is better)
Translates to: WATECAKGSRMEFLS*KQAEGCAKVWQMAS
Trigger: TGAGGCCATTTGCCACACCTTGGCACACCCCTCAGCTTGTTTTCATGAAAGAAACTCCATTCTGCTGCCCTTAGCGCACTCAGTTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR GCA 90 bp CTGTCTTTGCCAACAGCACAGGGCTCTTGGTGGTGGCTTTTGGCTTaGTGGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGCGTCCAG +
Preference number: 1 (lower is better)
Translates to: LSLPTAQGSWWWLLA*WFSMFFWLHHGSVQ
Trigger: CTGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAGCCAAAAGCCACCACCAAGAGCCCTGTGCTGTTGGCAAAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CCA 90 bp AGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATaGAACAGTTCTGAAGGTGTGGTGAAGGATGTCCTGTTCCATGCA +
Preference number: 1 (lower is better)
Translates to: SAARTCDPPSQIRSS*NSSEGVVKDVLFHA
Trigger: TGCATGGAACAGGACATCCTTCACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR CCA 90 bp TGCCTGGTGAGGCTGTCTTTGCCAACAGCACAGGGCTCTTGGTGGTaGCTTTTGGCTTGCTGGTTCTCTATGTTCTTCTGGCTTCATCAT +
Preference number: 1 (lower is better)
Translates to: CLVRLSLPTAQGSWW*LLACWFSMFFWLHH
Trigger: ATGATGAAGCCAGAAGAACATAGAGAACCAGCAAGCCAAAAGCCACCACCAAGAGCCCTGTGCTGTTGGCAAAGACAGCCTCACCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CCA 90 bp TTCTTTCATGAAAACAAGCTGAGGGGTGTGCCAAGGTGTGGCAAATaGCCTCACTTGGTGAAGGGAAGCAGCAACTCCACGAAAGCTCCT +
Preference number: 1 (lower is better)
Translates to: FFHENKLRGVPRCGK*PHLVKGSSNSTKAP
Trigger: AGGAGCTTTCGTGGAGTTGCTGCTTCCCTTCACCAAGTGAGGCCATTTGCCACACCTTGGCACACCCCTCAGCTTGTTTTCATGAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR CCA 90 bp TCTTTGCCAACAGCACAGGGCTCTTGGTGGTGGCTTTTGGCTTGCTaGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGCGTCCAGATC +
Preference number: 1 (lower is better)
Translates to: SLPTAQGSWWWLLAC*FSMFFWLHHGSVQI
Trigger: GATCTGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAGCCAAAAGCCACCACCAAGAGCCCTGTGCTGTTGGCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR GCA 90 bp AGATCCACCAGCTTTTGCCTCCCGAGTGATGGGATTAAAGTTGTGTaGCATCACTGCCCGGCTGAATACATCTTTCTTGGACAGCTAGAC +
Preference number: 1 (lower is better)
Translates to: RSTSFCLPSDGIKVV*HHCPAEYIFLGQLD
Trigger: GTCTAGCTGTCCAAGAAAGATGTATTCAGCCGGGCAGTGATGGCACACAACTTTAATCCCATCACTCGGGAGGCAAAAGCTGGTGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR CCA 90 bp GTGGCTTTTGGCTTGCTGGTTCTCTATGTTCTTCTGGCTTCATCATaGAAGCGTCCAGATCCAGGAGCTCTGACTGATAGACAGGTATGG +
Preference number: 1 (lower is better)
Translates to: VAFGLLVLYVLLASS*KRPDPGALTDRQVW
Trigger: CCATACCTGTCTATCAGTCAGAGCTCCTGGATCTGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAGCCAAAAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR GCA 90 bp AGCTTTTGCCTCCCGAGTGATGGGATTAAAGTTGTGTGCCATCACTaGCCGGCTGAATACATCTTTCTTGGACAGCTAGACAAACAGGGA +
Preference number: 1 (lower is better)
Translates to: SFCLPSDGIKVVCHH*PAEYIFLGQLDKQG
Trigger: TCCCTGTTTGTCTAGCTGTCCAAGAAAGATGTATTCAGCCGGGCAGTGATGGCACACAACTTTAATCCCATCACTCGGGAGGCAAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR CCA 90 bp TATCACCTTAAGTTGGCCTGGAAATCCTTACGAGCCACCATTGCCTaGCTTCATTTACTTTTTAACCATGGAGATGAGACAGGAGTGCTG +
Preference number: 1 (lower is better)
Translates to: YHLKLAWKSLRATIA*LHLLFNHGDETGVL
Trigger: CAGCACTCCTGTCTCATCTCCATGGTTAAAAAGTAAATGAAGCCAGGCAATGGTGGCTCGTAAGGATTTCCAGGCCAACTTAAGGTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR TCA 90 bp TTGTTGACTATCAGCACCACTGAAGAGCCTGACCGTACAGGCACATaGAATATATTGGAGGTGTTTGTCATGTGGTCAAGCATAAGAGTG +
Preference number: 1 (lower is better)
Translates to: LLTISTTEEPDRTGT*NILEVFVMWSSIRV
Trigger: CACTCTTATGCTTGACCACATGACAAACACCTCCAATATATTTCATGTGCCTGTACGGTCAGGCTCTTCAGTGGTGCTGATAGTCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR-3UTR TCA 90 bp AGGGGCTTCTGGAGGCTCTGTGGGAGCTGCCCGAATCCGCTTCCTCCCAGTCACGAGACCTTGGCCATGTaGGGCCAGGCTTTTGCAGTA +
Preference number: 2 (lower is better)
Translates to: RGFWRLCGSCPNPLPPSHETLAM*GQAFAV
Trigger: TACTGCAAAAGCCTGGCCTCACATGGCCAAGGTCTC...GTGACTGGGAGGAAGCGGATTCGGGCAGCTCCCACAGAGCCTCCAGAAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR-3UTR TCA 90 bp CTGTCCAAGGCATTCAGGTGCTCCTCCAGTCCGATGAGGGTGGTGCATATCCGATCTCCAGCGCTGACATaGAGGTGCCCACCAGGGCAC +
Preference number: 2 (lower is better)
Translates to: LSKAFRCSSSPMRVVHIRSPALT*RCPPGH
Trigger: GTGCCCTGGTGGGCACCTTCATGTCAGCGCTGGAGA...TCGGATATGCACCACCCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR-3UTR CCA 90 bp CTCCCTGCGTCTGCAAGACCTCCAGGATGGCACGGAAGATGGCAGCAGCTGCGATTAGCCAGCCCTGAATaGCTTTGGCAGCACGGCTAT +
Preference number: 2 (lower is better)
Translates to: LPASARPPGWHGRWQQLRLASPE*LWQHGY
Trigger: ATAGCCGTGCTGCCAAAGCCATTCAGGGCTGGCTAA...TCGCAGCTGCTGCCATCTTCCGTGCCATCCTGGAGGTCTTGCAGACGCAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR CAA 90 bp TCTGCTGTACTGGGGCTCCTGGCTGGTTTCAGCAACAGACTTCTCTaGGGCCAGAGACCCAACCTTGCTACTCCAGTTGCAGGCTCTCGC +
Preference number: 2 (lower is better)
Translates to: SAVLGLLAGFSNRLL*GQRPNLATPVAGSR
Trigger: GCGAGAGCCTGCAACTGGAGTAGCAAGGTTGGGTCTCTGGCCCAAGAGAAGTCTGTTGCTGAAACCAGCCAGGAGCCCCAGTACAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CAA 90 bp AAAATGCCACCAAGCCCTACTCCAGCCTGCCTGGTGAGGCTGTCTTaGCCAACAGCACAGGGCTCTTGGTGGTGGCTTTTGGCTTGCTGG +
Preference number: 2 (lower is better)
Translates to: KMPPSPTPACLVRLS*PTAQGSWWWLLACW
Trigger: CCAGCAAGCCAAAAGCCACCACCAAGAGCCCTGTGCTGTTGGCAAAGACAGCCTCACCAGGCAGGCTGGAGTAGGGCTTGGTGGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR TCA 90 bp GAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTAGGGAGGGAGGGAGGTaGCCATCTGAAGGCAAGACA +
Preference number: 2 (lower is better)
Translates to: EGKNSAARTCDPPSQIRSREGGR*PSEGKT
Trigger: TGTCTTGCCTTCAGATGGTCACCTCCCTCCCTCCCT...AGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR-3UTR TCA 90 bp CAGGGCACGGGCGACCTTCACTCCACGGCCCTCCAGCAAGCGTATGGCAGCATCTTCATGGAACAGTTCTaGAGGTGTGGTGAAGGATGT +
Preference number: 2 (lower is better)
Translates to: QGTGDLHSTALQQAYGSIFMEQF*RCGEGC
Trigger: ACATCCTTCACCACACCTTCAGAACTGTTCCATGAA...GATGCTGCCATACGCTTGCTGGAGGGCCGTGGAGTGAAGGTCGCCCGTGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR-3UTR GCA 90 bp TGCATGACAGGGAATGAAGCGGGCAGGGGCTCCTGGGAACGGTCAGCGATGCGGTCTCTTCTGCTGGTCTaGAGATTTTGGGCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: CMTGNEAGRGSWERSAMRSLLLV*RFWAAF
Trigger: GAAAGCAGCCCAAAATCTGCAGACCAGCAGAAGAGA...CCGCATCGCTGACCGTTCCCAGGAGCCCCTGCCCGCTTCATTCCCTGTCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR CCA 90 bp AAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGGTTCCATGCAGAGGTTaGGTGTTAGGGGGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: KACATTARLRPEILKRNGVPCRG*VLGGGW
Trigger: CCACCCTCCCCCTAACACCCAACCTCTGCATGGAAC...CCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR-3UTR CCA 90 bp GAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTGTTCCATGCAGAGGTTaGGTGTTAGGGGGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: EGKNSAARTCDPPSQIRSVPCRG*VLGGGW
Trigger: CCACCCTCCCCCTAACACCCAACCTCTGCATGGAAC...AGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR-3UTR TCA 90 bp AGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTAGGGAGGGAGGGAGGTaGCCATCTGAAGGCAAGACA +
Preference number: 2 (lower is better)
Translates to: RGRTVLPGHVTHLARYDLREGGR*PSEGKT
Trigger: TGTCTTGCCTTCAGATGGTCACCTCCCTCCCTCCCT...AAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR-3UTR TCA 90 bp TCTGCAAGACCTCCAGGATGGCACGGAAGATGGCAGCAGCTGCGACTGCTCCAGAAGTGCCATCTGCTTTaGTGTTACACCTCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: SARPPGWHGRWQQLRLLQKCHLL*CYTSCC
Trigger: GCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTT...CTGGAGCAGTCGCAGCTGCTGCCATCTTCCGTGCCATCCTGGAGGTCTTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR CAA 90 bp TCCAGCCTGCCTGGTGAGGCTGTCTTTGCCAACAGCACAGGGCTCTaGGTGGTGGCTTTTGGCTTGCTGGTTCTCTATGTTCTTCTGGCT +
Preference number: 2 (lower is better)
Translates to: SSLPGEAVFANSTGL*VVAFGLLVLYVLLA
Trigger: AGCCAGAAGAACATAGAGAACCAGCAAGCCAAAAGCCACCACCAAGAGCCCTGTGCTGTTGGCAAAGACAGCCTCACCAGGCAGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR TCA 90 bp GTGCATATCCGATCCAGCACAAGTGCCATCTGCTTTGATGTTACACCTCCTGCTTCTCCAGCGCTGACATaGAGGTGCCCACCAGGGCAC +
Preference number: 2 (lower is better)
Translates to: VHIRSSTSAICFDVTPPASPALT*RCPPGH
Trigger: GTGCCCTGGTGGGCACCTTCATGTCAGCGCTGGAGA...AGCAGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCTGGATCGGATATGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR-3UTR GCA 90 bp TCCAGCACAAGTGCCATCTGCTTTGATGTTACACCTCCTGCTGCAGTGGCTTCACTGGGATTAAAGGCGTaGGCCACCACTGCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: SSTSAICFDVTPPAAVASLGLKA*ATTARL
Trigger: CAGCCTGGCAGTGGTGGCGCACGCCTTTAATCCCAG...TGAAGCCACTGCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR-3UTR GCA 90 bp GCCATATTGGCCCAAGTGTCCCAAAGAAGCCAACCTTTGGCAGCACGGCTATGGTCCAAGGCATTCAGGTaGTCCTCCAGTCCGATGAGG +
Preference number: 2 (lower is better)
Translates to: AILAQVSQRSQPLAARLWSKAFR*SSSPMR
Trigger: CCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGA...CCATAGCCGTGCTGCCAAAGGTTGGCTTCTTTGGGACACTTGGGCCAATATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR-3UTR GCA 90 bp ATCTGGCAGATGTGGGAAGATATGCTATGGACCAGTCTCAGGAACCTTGGGGCTAGCTCGGGCCTGGTGTaGCTCCTGAAGCTCAGGTTC +
Preference number: 2 (lower is better)
Translates to: IWQMWEDMLWTSLRNLGASSGLV*LLKLRF
Trigger: GAACCTGAGCTTCAGGAGGCACACCAGGCCCGAGCT...AGCCCCAAGGTTCCTGAGACTGGTCCATAGCATATCTTCCCACATCTGCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR CCA 90 bp TTCCATACTTCTGCATGGACTCTAAGCCGGCATCCATGGCAGCAGACCAGGTTGTTGGCCTTGAGAGGCTaGGCAGCTGCAGTCAGGAAC +
Preference number: 2 (lower is better)
Translates to: FHTSAWTLSRHPWQQTRLLALRG*AAAVRN
Trigger: GTTCCTGACTGCAGCTGCCCAGCCTCTCAAGGCCAA...CAACCTGGTCTGCTGCCATGGATGCCGGCTTAGAGTCCATGCAGAAGTATGGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR-3UTR TCA 90 bp TCCAGCACAAGTGCCATCTGCTTTGATGTTACACCTCCTGCTGCAGTGGCTTCAAGGGACTCCTCATCCTaGGGAGGGGAAGAACAGTGC +
Preference number: 2 (lower is better)
Translates to: SSTSAICFDVTPPAAVASRDSSS*GGEEQC
Trigger: GCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCT...TGAAGCCACTGCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR-3UTR CCA 90 bp CAGGGCACGGGCGACCTTCACTCCACGGCCCTCCAGCAAGCGTATGGCAGCATCGCACATGAAATATATTaGAGGTGTTTGTCATGTGGT +
Preference number: 2 (lower is better)
Translates to: QGTGDLHSTALQQAYGSIAHEIY*RCLSCG
Trigger: ACCACATGACAAACACCTCCAATATATTTCATGTGC...GATGCTGCCATACGCTTGCTGGAGGGCCGTGGAGTGAAGGTCGCCCGTGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR CAA 90 bp GCATCAGCTATGATGCCCAGTTCCAGGAAAGACAGGCCACCCAGATaGTTGACTATCAGCACCACTGAAGAGCCTGACCGTACAGGCACA +
Preference number: 2 (lower is better)
Translates to: ASAMMPSSRKDRPPR*LTISTTEEPDRTGT
Trigger: TGTGCCTGTACGGTCAGGCTCTTCAGTGGTGCTGATAGTCAACAATCTGGGTGGCCTGTCTTTCCTGGAACTGGGCATCATAGCTGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR-3UTR TCA 90 bp GACCCACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTGAAGAGGGAGGGAGGGAGGTaGCCATCTGAAGGCAAGACA +
Preference number: 2 (lower is better)
Translates to: DPPSQIRSSWNSSEGVVKREGGR*PSEGKT
Trigger: TGTCTTGCCTTCAGATGGTCACCTCCCTCCCTCCCT...CTTCACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR-3UTR TCA 90 bp CTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACTTCATGGAACAGTTCTaGAGGTGTGGTGAAGGATGT +
Preference number: 2 (lower is better)
Translates to: LRRGRTVLPGHVTHLARYFMEQF*RCGEGC
Trigger: ACATCCTTCACCACACCTTCAGAACTGTTCCATGAA...GTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR-3UTR TCA 90 bp GGTAAGGCCAGGTGTAGAGAAGGACTCAAGAAGGACTTGCACCTTGCTAAGAAGACCTTGGGGCTTCCCTaGAAGATCTGGTGGCTTGGC +
Preference number: 2 (lower is better)
Translates to: GKARCREGLKKDLHLAKKTLGLP*KIWWLG
Trigger: GCCAAGCCACCAGATCTTTCAGGGAAGCCCCAAGGT...CTTCTTAGCAAGGTGCAAGTCCTTCTTGAGTCCTTCTCTACACCTGGCCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR GCA 90 bp CGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTCTGGGATTAAAGGCGTaGGCCACCACTGCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: RILTGYRRPSRGRGLESFLGLKA*ATTARL
Trigger: CAGCCTGGCAGTGGTGGCGCACGCCTTTAATCCCAG...AAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR-3UTR GCA 90 bp GCCCTGTCCAAGGCATTCAGGTGCTCCTCCAGTCCGATGAGGGTGGTGCATATCGTGAGGCCAGGCTTTTaGAGTAGTTTCAGCATCTAT +
Preference number: 2 (lower is better)
Translates to: ALSKAFRCSSSPMRVVHIVRPGF*SSFSIY
Trigger: ATAGATGCTGAAACTACTGCAAAAGCCTGGCCTCAC...GATATGCACCACCCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGACAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR-3UTR GCA 90 bp CTTGCTGGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGCGTCCAGATCCAGGTGGCTGGGTTCACCCTaGAGGTTGAGGGTCTGTCTG +
Preference number: 2 (lower is better)
Translates to: LAGSLCSSGFIMEASRSRWLGSP*RLRVCL
Trigger: CAGACAGACCCTCAACCTGCAGGGTGAACCCAGCCA...CCTGGATCTGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR CCA 90 bp TTGTGCAGAGCTGATATAACTAGCTCTCCCAGCACCAGCTTCCATATTCTTGGTGGCTTCAGGGGCTTCTaGAGGCTCTGTGGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: LCRADITSSPSTSFHILGGFRGF*RLCGSC
Trigger: GCAGCTCCCACAGAGCCTCCAGAAGCCCCTGAAGCC...ACCAAGAATATGGAAGCTGGTGCTGGGAGAGCTAGTTATATCAGCTCTGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR CAA 90 bp GGATTAAAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTaGAAACGAAATGGGTATACCCAGTTAGAGACTGGGGTGGATAAG +
Preference number: 2 (lower is better)
Translates to: GLKACATTARLRPEI*KRNGYTQLETGVDK
Trigger: CTTATCCACCCCAGTCTCTAACTGGGTATACCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTTTAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR CAA 90 bp GCTGTCTTTGCCAACAGCACAGGGCTCTTGGTGGTGGCTTTTGGCTaGCTGGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGCGTCCA +
Preference number: 2 (lower is better)
Translates to: AVFANSTGLLVVAFG*LVLYVLLASSWKRP
Trigger: TGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAGCCAAAAGCCACCACCAAGAGCCCTGTGCTGTTGGCAAAGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CAA 90 bp GTGAGGCTGTCTTTGCCAACAGCACAGGGCTCTTGGTGGTGGCTTTaGGCTTGCTGGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGC +
Preference number: 2 (lower is better)
Translates to: VRLSLPTAQGSWWWL*ACWFSMFFWLHHGS
Trigger: GCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAGCCAAAAGCCACCACCAAGAGCCCTGTGCTGTTGGCAAAGACAGCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR TCA 90 bp CGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTAGGGACTCCTCATCCTaGGGAGGGGAAGAACAGTGC +
Preference number: 2 (lower is better)
Translates to: RILTGYRRPSRGRGLESFRDSSS*GGEEQC
Trigger: GCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCT...AAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR-3UTR TCA 90 bp TCCAGCACAAGTGCCATCTGCTTTGATGTTACACCTCCTGCTGCAGTGGCTTCATGGCAGCATCAGCTATaGTGCCCAGTTCCAGGAAAG +
Preference number: 2 (lower is better)
Translates to: SSTSAICFDVTPPAAVASWQHQL*CPVPGK
Trigger: CTTTCCTGGAACTGGGCATCATAGCTGATGCTGCCA...TGAAGCCACTGCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR-3UTR GCA 90 bp CTGTCCAAGGCATTCAGGTGCTCCTCCAGTCCGATGAGGGTGGTGCATATCCGAAGCACAAGTGCCATCTaGTTTGATGTTACACCTCCT +
Preference number: 2 (lower is better)
Translates to: LSKAFRCSSSPMRVVHIRSTSAI*FDVTPP
Trigger: AGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCT...TCGGATATGCACCACCCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR-3UTR GCA 90 bp GTATGGCTGCTGTCTCCCATTCTAGGTGGGGTAAGGCCAGGTGTAGAGAAGGACCACACATGTCTCTTCTaGTGGTCTGCAGATTTTGGG +
Preference number: 2 (lower is better)
Translates to: VWLLSPILGGVRPGVEKDHTCLF*WSADFG
Trigger: CCCAAAATCTGCAGACCAGCAGAAGAGACATGTGTG...GTCCTTCTCTACACCTGGCCTTACCCCACCTAGAATGGGAGACAGCAGCCATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR CCA 90 bp TTTCGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTGTTCCATGCAGAGGTTaGGTGTTAGGGGGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: FRILTGYRRPSRGRGLESVPCRG*VLGGGW
Trigger: CCACCCTCCCCCTAACACCCAACCTCTGCATGGAAC...AGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR-3UTR CCA 90 bp CGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTGTTCCATGCAGAGGTTaGGTGTTAGGGGGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: RILTGYRRPSRGRGLESFVPCRG*VLGGGW
Trigger: CCACCCTCCCCCTAACACCCAACCTCTGCATGGAAC...AAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR CAA 90 bp CTCAGAGATCCACCAGCTTTTGCCTCCCGAGTGATGGGATTAAAGTaGTGTGCCATCACTGCCCGGCTGAATACATCTTTCTTGGACAGC +
Preference number: 2 (lower is better)
Translates to: LRDPPAFASRVMGLK*CAITARLNTSFLDS
Trigger: GCTGTCCAAGAAAGATGTATTCAGCCGGGCAGTGATGGCACACAACTTTAATCCCATCACTCGGGAGGCAAAAGCTGGTGGATCTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR-3UTR TCA 90 bp TTGTGCAGAGCTGATATAACTAGCTCTCCCAGCACCAGCTTCCATATTCTTGGTTCCTTTAGCCAGCCCTaGATGGCTTTGGCAGCACGG +
Preference number: 2 (lower is better)
Translates to: LCRADITSSPSTSFHILGSFSQP*MALAAR
Trigger: CCGTGCTGCCAAAGCCATTCAGGGCTGGCTAAAGGA...ACCAAGAATATGGAAGCTGGTGCTGGGAGAGCTAGTTATATCAGCTCTGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR-3UTR GCA 90 bp GTGCAGCCTTTCCATACTTCTGCATGGACTCTAAGCCGGCATCCATGGCAGCAGAGCACAAGTGCCATCTaGTTTGATGTTACACCTCCT +
Preference number: 2 (lower is better)
Translates to: VQPFHTSAWTLSRHPWQQSTSAI*FDVTPP
Trigger: AGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCT...CTGCTGCCATGGATGCCGGCTTAGAGTCCATGCAGAAGTATGGAAAGGCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR-3UTR GCA 90 bp CCTCAGAAGTTCTGCTGTACTGGGGCTCCTGGCTGGTTTCAGCAACAGACTTCTGCACAAAGACCTTCTTaGCTTGGTCACACATGTCTC +
Preference number: 2 (lower is better)
Translates to: PQKFCCTGAPGWFQQQTSAQRPS*LGHTCL
Trigger: GAGACATGTGTGACCAAGGCAAGAAGGTCTTTGTGC...AGAAGTCTGTTGCTGAAACCAGCCAGGAGCCCCAGTACAGCAGAACTTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR CCA 90 bp TTGTGCAGAGCTGATATAACTAGCTCTCCCAGCACCAGCTTCCATATTCTTGGTGCAGGACAGACAATCTaGAGAGTACCTGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: LCRADITSSPSTSFHILGAGQTI*RVPGQG
Trigger: GCCCTGCCCAGGTACTCTCCAGATTGTCTGTCCTGC...ACCAAGAATATGGAAGCTGGTGCTGGGAGAGCTAGTTATATCAGCTCTGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR-3UTR CCA 90 bp GGTAAGGCCAGGTGTAGAGAAGGACTCAAGAAGGACTTGCACCTTGCTAAGAAGGCAACAGACTTCTCTTaGGCCAGAGACCCAACCTTG +
Preference number: 2 (lower is better)
Translates to: GKARCREGLKKDLHLAKKATDFS*ARDPTL
Trigger: CAAGGTTGGGTCTCTGGCCCAAGAGAAGTCTGTTGC...CTTCTTAGCAAGGTGCAAGTCCTTCTTGAGTCCTTCTCTACACCTGGCCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR CCA 90 bp AGCACCAGCTTCCATATTCTTGGTGGCCTCGGCTGCAGCTTCAGCACTCTTGACCAGATACGATCTTCATaGAACAGTTCTGAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: STSFHILGGLGCSFSTLDQIRSS*NSSEGV
Trigger: CACACCTTCAGAACTGTTCCATGAAGATCGTATCTG...GTCAAGAGTGCTGAAGCTGCAGCCGAGGCCACCAAGAATATGGAAGCTGGTGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR-3UTR CCA 90 bp CTTGCTGGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGCGTCCAGATCCAGGGGCATCTGGCAGATGTaGGAAGATATGCTATGGACC +
Preference number: 2 (lower is better)
Translates to: LAGSLCSSGFIMEASRSRGIWQM*EDMLWT
Trigger: GGTCCATAGCATATCTTCCCACATCTGCCAGATGCC...CCTGGATCTGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR CCA 90 bp GCTGATATAACTAGCTCTCCCAGCACCAGCTTCCATATTCTTGGTGGCCTCGGCGAGGTGTTTGTCATGTaGTCAAGCATAAGAGTGACA +
Preference number: 2 (lower is better)
Translates to: ADITSSPSTSFHILGGLGEVFVM*SSIRVT
Trigger: TGTCACTCTTATGCTTGACCACATGACAAACACCTC...GCCGAGGCCACCAAGAATATGGAAGCTGGTGCTGGGAGAGCTAGTTATATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR-3UTR CCA 90 bp CTTGCTGGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGCGTCCAGATCCAGGACATGTCTCTTCTGCTaGTCTGCAGATTTTGGGCTG +
Preference number: 2 (lower is better)
Translates to: LAGSLCSSGFIMEASRSRTCLFC*SADFGL
Trigger: CAGCCCAAAATCTGCAGACCAGCAGAAGAGACATGT...CCTGGATCTGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR CCA 90 bp CTTGCTGGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGCGTCCAGATCCAGGTTTCTGGTCCTCCATTaGCACAAAGACCTTCTTGCC +
Preference number: 2 (lower is better)
Translates to: LAGSLCSSGFIMEASRSRFLVLH*HKDLLA
Trigger: GGCAAGAAGGTCTTTGTGCCAATGGAGGACCAGAAA...CCTGGATCTGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR TCA 90 bp TCCAGCACAAGTGCCATCTGCTTTGATGTTACACCTCCTGCTGCAGTGGCTTCAGACCGTACAGGCACATaGAATATATTGGAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: SSTSAICFDVTPPAAVASDRTGT*NILEVF
Trigger: AAACACCTCCAATATATTTCATGTGCCTGTACGGTC...TGAAGCCACTGCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR-3UTR TCA 90 bp AATCCTTACGAGCCACCATTGCCTGGCTTCATTTACTTTTTAACCATGGAGATGGAGACCTTGGCCATGTaGGGCCAGGCTTTTGCAGTA +
Preference number: 2 (lower is better)
Translates to: NPYEPPLPGFIYFLTMEMETLAM*GQAFAV
Trigger: TACTGCAAAAGCCTGGCCTCACATGGCCAAGGTCTC...CATCTCCATGGTTAAAAAGTAAATGAAGCCAGGCAATGGTGGCTCGTAAGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR-3UTR CCA 90 bp GATCCAGCACAAGTGCCATCTGCTTTGATGTTACACCTCCTGCTGCAGTGGCTTGAGGTGTTTGTCATGTaGTCAAGCATAAGAGTGACA +
Preference number: 2 (lower is better)
Translates to: DPAQVPSALMLHLLLQWLEVFVM*SSIRVT
Trigger: TGTCACTCTTATGCTTGACCACATGACAAACACCTC...AAGCCACTGCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCTGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR-3UTR CCA 90 bp CTTGCTGGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGCGTCCAGATCCAGGCCTCTGCTTTTCTTGTaGCTTTGGCTTATTGCCGTT +
Preference number: 2 (lower is better)
Translates to: LAGSLCSSGFIMEASRSRPLLFL*LWLIAV
Trigger: AACGGCAATAAGCCAAAGCCACAAGAAAAGCAGAGG...CCTGGATCTGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR TCA 90 bp TATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTGACCGTACAGGCACATaGAATATATTGGAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: YRRPSRGRGLESFCLPSADRTGT*NILEVF
Trigger: AAACACCTCCAATATATTTCATGTGCCTGTACGGTC...AGCACTTGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR-3UTR CCA 90 bp GCAGCAACTCCACGAAAGCTCCTAAATGTTCTTGAAATTGTTAAATGGAATGTCGCACATGAAATATATTaGAGGTGTTTGTCATGTGGT +
Preference number: 2 (lower is better)
Translates to: AATPRKLLNVLEIVKWNVAHEIY*RCLSCG
Trigger: ACCACATGACAAACACCTCCAATATATTTCATGTGC...GACATTCCATTTAACAATTTCAAGAACATTTAGGAGCTTTCGTGGAGTTGCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR CCA 72 bp TGTTGCATGACAGGGAATGAAGCGGGCAGGGGCTCCTaGGAACGGTCAGCGATGCGGTCTCTGCTCCCTCAG +
Preference number: 3 (lower is better)
Translates to: CCMTGNEAGRGS*ERSAMRSLLPQ
Trigger: CTGAGGGAGCAGAGACCGCATCGCTGACCGTTCCCAGGAGCCCCTGCCCGCTTCATTCCCTGTCATGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR TCA 72 bp GCCAGGTGGGAAGCCAAGCAGCTTGAAGGTGCAGATTaGGTGGTCGATGGGGACTCTGGTGTCAGAGCAGCC +
Preference number: 3 (lower is better)
Translates to: ARWEAKQLEGAD*VVDGDSGVRAA
Trigger: GGCTGCTCTGACACCAGAGTCCCCATCGACCACTCAATCTGCACCTTCAAGCTGCTTGGCTTCCCACCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR GCA 72 bp TCCCCATCACCAGCAGCCCTGTCCAAGGCATTCAGGTaGTCCTCCAGTCCGATGAGGGTGGTGCATATCCGA +
Preference number: 3 (lower is better)
Translates to: SPSPAALSKAFR*SSSPMRVVHIR
Trigger: TCGGATATGCACCACCCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGACAGGGCTGCTGGTGATGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR-3UTR CAA 90 bp CTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACTGTTCCATGCAGAGGTaGGGTGTTAGGGGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: LRRGRTVLPGHVTHLARYCSMQR*GVRGRV
Trigger: CACCCTCCCCCTAACACCCAACCTCTGCATGGAACA...GTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR-3UTR CAA 90 bp TGCATGACAGGGAATGAAGCGGGCAGGGGCTCCTGGGAACGGTCAGCGATGCGGGGCACAAAGACCTTCTaGCCTTGGTCACACATGTCT +
Preference number: 3 (lower is better)
Translates to: CMTGNEAGRGSWERSAMRGTKTF*PWSHMS
Trigger: AGACATGTGTGACCAAGGCAAGAAGGTCTTTGTGCC...CCGCATCGCTGACCGTTCCCAGGAGCCCCTGCCCGCTTCATTCCCTGTCATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR CAA 90 bp CTCCCTGCGTCTGCAAGACCTCCAGGATGGCACGGAAGATGGCAGCAGCTGCGAAGGCCTAGAATCTTTTaGCCTCCCAAGTGCTGGGAT +
Preference number: 3 (lower is better)
Translates to: LPASARPPGWHGRWQQLRRPRIF*PPKCWD
Trigger: ATCCCAGCACTTGGGAGGCAAAAAGATTCTAGGCCT...TCGCAGCTGCTGCCATCTTCCGTGCCATCCTGGAGGTCTTGCAGACGCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR TCA 72 bp CACGGCCCTCCAGCAAGCGTATGGCAGCATCAGCTATaGTGCCCAGTTCCAGGAAAGACAGGCCACCCAGAT +
Preference number: 3 (lower is better)
Translates to: HGPPASVWQHQL*CPVPGKTGHPD
Trigger: ATCTGGGTGGCCTGTCTTTCCTGGAACTGGGCATCATAGCTGATGCTGCCATACGCTTGCTGGAGGGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR TCA 72 bp CATCAAAGTAAGAGACACACCAGGCATCTCCAGCGCTaGCATGAAGGTGCCCACCAGGGCACGGGCGACCTT +
Preference number: 3 (lower is better)
Translates to: HQSKRHTRHLQR*HEGAHQGTGDL
Trigger: AAGGTCGCCCGTGCCCTGGTGGGCACCTTCATGTCAGCGCTGGAGATGCCTGGTGTGTCTCTTACTTTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR TCA 72 bp CCCTGTCCAAGGCATTCAGGTGCTCCTCCAGTCCGATaGGGGTGGTGCATATCCGATCCAGCACAAGTGCCA +
Preference number: 3 (lower is better)
Translates to: PCPRHSGAPPVR*GWCISDPAQVP
Trigger: TGGCACTTGTGCTGGATCGGATATGCACCACCCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR GCA 72 bp GCTGAGGAGGAGAAAAGCAGTCATGCTCCCTGCGTCTaGAAGACCTCCAGGATGGCACGGAAGATGGCAGCA +
Preference number: 3 (lower is better)
Translates to: AEEEKSSHAPCV*KTSRMARKMAA
Trigger: TGCTGCCATCTTCCGTGCCATCCTGGAGGTCTTGCAGACGCAGGGAGCATGACTGCTTTTCTCCTCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR GCA 72 bp AGGTTGAGGGTCTGTCTGAGCAGCTCGGGCCTGGTGTaGCTCCTGAAGCTCAGGTTCTTTCGAGGTCATGTC +
Preference number: 3 (lower is better)
Translates to: RLRVCLSSSGLV*LLKLRFFRGHV
Trigger: GACATGACCTCGAAAGAACCTGAGCTTCAGGAGGCACACCAGGCCCGAGCTGCTCAGACAGACCCTCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CCA 72 bp TGCAGCTTCAGCACTCTTGACTGCTTTAGTCAGGACTaGGAGGAGACTGGCCCCTGGGCTCTTCCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: CSFSTLDCFSQD*EETGPWALPGL
Trigger: CAAGCCTGGAAGAGCCCAGGGGCCAGTCTCCTCCCAGTCCTGACTAAAGCAGTCAAGAGTGCTGAAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR CCA 72 bp AGGAACCTTGGGGCTTCCCTGAAAGATCTGGTGGCTTaGCTGGGTTCACCCTGCAGGTTGAGGGTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: RNLGASLKDLVA*LGSPCRLRVCL
Trigger: CAGACAGACCCTCAACCTGCAGGGTGAACCCAGCCAAGCCACCAGATCTTTCAGGGAAGCCCCAAGGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR CAA 90 bp CTTCAGGGGCTTCTGGAGGCTCTGTGGGAGCTGCCCGAATCCGCTTCCTCCCAGCTGAGGCCTGAAATCTaGAAACGAAATGGGTATACC +
Preference number: 3 (lower is better)
Translates to: LQGLLEALWELPESASSQLRPEI*KRNGYT
Trigger: GGTATACCCATTTCGTTTCAAGATTTCAGGCCTCAG...CTGGGAGGAAGCGGATTCGGGCAGCTCCCACAGAGCCTCCAGAAGCCCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR TCA 72 bp TGCTATGGACCAGTCTCAGGAACCTTGGGGCTTCCCTaGAAGATCTGGTGGCTTGGCTGGGTTCACCCTGCA +
Preference number: 3 (lower is better)
Translates to: CYGPVSGTLGLP*KIWWLGWVHPA
Trigger: TGCAGGGTGAACCCAGCCAAGCCACCAGATCTTTCAGGGAAGCCCCAAGGTTCCTGAGACTGGTCCATAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR TCA 72 bp CCAAGGTCCCCTCCCCTACAAGAGTCCTTGGCTCTGTaGGATGACATTTGGAAGGACTTGAGCCTGGCGAGG +
Preference number: 3 (lower is better)
Translates to: PRSPPLQESLAL*DDIWKDLSLAR
Trigger: CCTCGCCAGGCTCAAGTCCTTCCAAATGTCATCTCACAGAGCCAAGGACTCTTGTAGGGGAGGGGACCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CCA 72 bp CTCTCCAGCAGCAGGACAGACAATCTGGAGAGTACCTaGGCAGGGCTGGTTAGAGATGGGCCTTCCTTTAGC +
Preference number: 3 (lower is better)
Translates to: LSSSRTDNLEST*AGLVRDGPSFS
Trigger: GCTAAAGGAAGGCCCATCTCTAACCAGCCCTGCCCAGGTACTCTCCAGATTGTCTGTCCTGCTGCTGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR CCA 72 bp GTGTCCCAAAGAAGCCAACCTTTGGCAGCACGGCTATaGGTAGAACCACAATCCCCATCACCAGCAGCCCTG +
Preference number: 3 (lower is better)
Translates to: VSQRSQPLAARL*VEPQSPSPAAL
Trigger: CAGGGCTGCTGGTGATGGGGATTGTGGTTCTACCCATAGCCGTGCTGCCAAAGGTTGGCTTCTTTGGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR CCA 72 bp TGGGGCTCCTGGCTGGTTTCAGCAACAGACTTCTCTTaGGCCAGAGACCCAACCTTGCTACTCCAGTTGCAG +
Preference number: 3 (lower is better)
Translates to: WGSWLVSATDFS*ARDPTLLLQLQ
Trigger: CTGCAACTGGAGTAGCAAGGTTGGGTCTCTGGCCCAAGAGAAGTCTGTTGCTGAAACCAGCCAGGAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CCA 72 bp GGTGGGAAGCCAAGCAGCTTGAAGGTGCAGATTGAGTaGTCGATGGGGACTCTGGTGTCAGAGCAGCCAAAC +
Preference number: 3 (lower is better)
Translates to: GGKPSSLKVQIE*SMGTLVSEQPN
Trigger: GTTTGGCTGCTCTGACACCAGAGTCCCCATCGACCACTCAATCTGCACCTTCAAGCTGCTTGGCTTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR CAA 90 bp AGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACTGTTCCATGCAGAGGTaGGGTGTTAGGGGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: RGLESFCLPSAGIKGVRHCSMQR*GVRGRV
Trigger: CACCCTCCCCCTAACACCCAACCTCTGCATGGAACA...GTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAAAAAGATTCTAGGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR-3UTR CAA 90 bp TGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGTATACCTGTTCCATGCAGAGGTaGGGTGTTAGGGGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: CATTARLRPEILKRNGYTCSMQR*GVRGRV
Trigger: CACCCTCCCCCTAACACCCAACCTCTGCATGGAACA...GGTATACCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR-3UTR CAA 90 bp CTGTCCAAGGCATTCAGGTGCTCCTCCAGTCCGATGAGGGTGGTGCATATCCGAGACAGGCCACCCAGATaGTTGACTATCAGCACCACT +
Preference number: 3 (lower is better)
Translates to: LSKAFRCSSSPMRVVHIRDRPPR*LTISTT
Trigger: AGTGGTGCTGATAGTCAACAATCTGGGTGGCCTGTC...TCGGATATGCACCACCCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR-3UTR CAA 90 bp ACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAGTTGGGAGGTCAGTCTaGGCCTTGAGAGGCTGGGCA +
Preference number: 3 (lower is better)
Translates to: TGYRRPSRGRGLESFCLPVGRSV*ALRGWA
Trigger: TGCCCAGCCTCTCAAGGCCAAGACTGACCTCCCAAC...TGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR TCA 72 bp GGTGCATATCCGATCCAGCACAAGTGCCATCTGCTTTaGTGTTACACCTCCTGCTGCAGTGGCTTCAGGGGC +
Preference number: 3 (lower is better)
Translates to: GAYPIQHKCHLL*CYTSCCSGFRG
Trigger: GCCCCTGAAGCCACTGCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCTGGATCGGATATGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR GCA 72 bp CCCAGCACCAGCTTCCATATTCTTGGTGGCCTCGGCTaGAGCTTCAGCACTCTTGACTGCTTTAGTCAGGAC +
Preference number: 3 (lower is better)
Translates to: PSTSFHILGGLG*SFSTLDCFSQD
Trigger: GTCCTGACTAAAGCAGTCAAGAGTGCTGAAGCTGCAGCCGAGGCCACCAAGAATATGGAAGCTGGTGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR CCA 72 bp TTCCATACTTCTGCATGGACTCTAAGCCGGCATCCATaGCAGCAGACCAGGTTGGGAGGTCAGTCTTGGCCT +
Preference number: 3 (lower is better)
Translates to: FHTSAWTLSRHP*QQTRLGGQSWP
Trigger: AGGCCAAGACTGACCTCCCAACCTGGTCTGCTGCCATGGATGCCGGCTTAGAGTCCATGCAGAAGTATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR CCA 72 bp GAAAACAAGCTGAGGGGTGTGCCAAGGTGTGGCAAATaGCCTCACTTGGTGAAGGGAAGCAGCAACTCCACG +
Preference number: 3 (lower is better)
Translates to: ENKLRGVPRCGK*PHLVKGSSNST
Trigger: CGTGGAGTTGCTGCTTCCCTTCACCAAGTGAGGCCATTTGCCACACCTTGGCACACCCCTCAGCTTGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR-3UTR CAA 90 bp CTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCTGTTCCATGCAGAGGTaGGGTGTTAGGGGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: LTGYRRPSRGRGLESFCLCSMQR*GVRGRV
Trigger: CACCCTCCCCCTAACACCCAACCTCTGCATGGAACA...GAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR-3UTR CAA 90 bp TGGGGTAAGGCCAGGTGTAGAGAAGGACTCAAGAAGGACTTGCACCTTGCTAAGGCCAGAGACCCAACCTaGCTACTCCAGTTGCAGGCT +
Preference number: 3 (lower is better)
Translates to: WGKARCREGLKKDLHLAKARDPT*LLQLQA
Trigger: AGCCTGCAACTGGAGTAGCAAGGTTGGGTCTCTGGC...CTTAGCAAGGTGCAAGTCCTTCTTGAGTCCTTCTCTACACCTGGCCTTACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR TCA 72 bp GGGGTGTGCCAAGGTGTGGCAAATGGCCTCACTTGGTaGAGGGAAGCAGCAACTCCACGAAAGCTCCTAAAT +
Preference number: 3 (lower is better)
Translates to: GVCQGVANGLTW*REAATPRKLLN
Trigger: ATTTAGGAGCTTTCGTGGAGTTGCTGCTTCCCTTCACCAAGTGAGGCCATTTGCCACACCTTGGCACACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR TCA 72 bp TGGCCTAGAACTCAACTCTGTAGACCAGGCTGGCCTTaGACTCAGAGATCCACCAGCTTTTGCCTCCCGAGT +
Preference number: 3 (lower is better)
Translates to: WPRTQLCRPGWP*TQRSTSFCLPS
Trigger: ACTCGGGAGGCAAAAGCTGGTGGATCTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTTGAGTTCTAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR TCA 72 bp AGTCCTTGGCTCTGTGAGATGACATTTGGAAGGACTTaGGCCTGGCGAGGCTCTGCCAGTTCTGTGGCAAGA +
Preference number: 3 (lower is better)
Translates to: SPWLCEMTFGRT*AWRGSASSVAR
Trigger: TCTTGCCACAGAACTGGCAGAGCCTCGCCAGGCTCAAGTCCTTCCAAATGTCATCTCACAGAGCCAAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CCA 72 bp CTGGTGAGGCTGTCTTTGCCAACAGCACAGGGCTCTTaGTGGTGGCTTTTGGCTTGCTGGTTCTCTATGTTC +
Preference number: 3 (lower is better)
Translates to: LVRLSLPTAQGS*WWLLACWFSMF
Trigger: GAACATAGAGAACCAGCAAGCCAAAAGCCACCACCAAGAGCCCTGTGCTGTTGGCAAAGACAGCCTCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR CAA 90 bp AGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACGACAGGCCACCCAGATaGTTGACTATCAGCACCACT +
Preference number: 3 (lower is better)
Translates to: RGLESFCLPSAGIKGVRHDRPPR*LTISTT
Trigger: AGTGGTGCTGATAGTCAACAATCTGGGTGGCCTGTC...GTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAAAAAGATTCTAGGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR-3UTR CAA 90 bp GTAACTGAGGCATCTGGCAGATGTGGGAAGATATGCTATGGACCAGTCTCAGGAGAAAGATCTGGTGGCTaGGCTGGGTTCACCCTGCAG +
Preference number: 3 (lower is better)
Translates to: VTEASGRCGKICYGPVSGERSGG*AGFTLQ
Trigger: CTGCAGGGTGAACCCAGCCAAGCCACCAGATCTTTC...TCCTGAGACTGGTCCATAGCATATCTTCCCACATCTGCCAGATGCCTCAGTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR GCA 72 bp AGGGTGGTGCATATCCGATCCAGCACAAGTGCCATCTaGTTTGATGTTACACCTCCTGCTGCAGTGGCTTCA +
Preference number: 3 (lower is better)
Translates to: RVVHIRSSTSAI*FDVTPPAAVAS
Trigger: TGAAGCCACTGCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCTGGATCGGATATGCACCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR GCA 72 bp GATGACATTTGGAAGGACTTGAGCCTGGCGAGGCTCTaGCAGTTCTGTGGCAAGAATAGTGGGACAAGAGCT +
Preference number: 3 (lower is better)
Translates to: DDIWKDLSLARL*QFCGKNSGTRA
Trigger: AGCTCTTGTCCCACTATTCTTGCCACAGAACTGGCAGAGCCTCGCCAGGCTCAAGTCCTTCCAAATGTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CCA 72 bp GGTGCTATCTTTATCCGACGAACACCAGCTTCCCCATaGATCCCCAGGCCTAGCTCTATTTCATCAGCTGCA +
Preference number: 3 (lower is better)
Translates to: GAIFIRRTPASP*IPRPSSISSAA
Trigger: TGCAGCTGATGAAATAGAGCTAGGCCTGGGGATCCATGGGGAAGCTGGTGTTCGTCGGATAAAGATAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR CCA 72 bp AGGCTGTCTTTGCCAACAGCACAGGGCTCTTGGTGGTaGCTTTTGGCTTGCTGGTTCTCTATGTTCTTCTGG +
Preference number: 3 (lower is better)
Translates to: RLSLPTAQGSWW*LLACWFSMFFW
Trigger: CCAGAAGAACATAGAGAACCAGCAAGCCAAAAGCCACCACCAAGAGCCCTGTGCTGTTGGCAAAGACAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR CAA 90 bp TGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGTATACCAGGCCACCCAGATTGTaGACTATCAGCACCACTGAA +
Preference number: 3 (lower is better)
Translates to: CATTARLRPEILKRNGYTRPPRL*TISTTE
Trigger: TTCAGTGGTGCTGATAGTCAACAATCTGGGTGGCCT...GGTATACCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
3UTR-3UTR CAA 90 bp GTAAGGCCAGGTGTAGAGAAGGACTCAAGAAGGACTTGCACCTTGCTAAGAAGAACCTTGCTACTCCAGTaGCAGGCTCTCGCTGTCCAG +
Preference number: 3 (lower is better)
Translates to: VRPGVEKDSRRTCTLLRRTLLLQ*QALAVQ
Trigger: CTGGACAGCGAGAGCCTGCAACTGGAGTAGCAAGGT...TCTTCTTAGCAAGGTGCAAGTCCTTCTTGAGTCCTTCTCTACACCTGGCCTTAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR CAA 90 bp GTATGGCTGCTGTCTCCCATTCTAGGTGGGGTAAGGCCAGGTGTAGAGAAGGACAAAGACCTTCTTGCCTaGGTCACACATGTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: VWLLSPILGGVRPGVEKDKDLLA*VTHVSS
Trigger: AGAAGAGACATGTGTGACCAAGGCAAGAAGGTCTTT...GTCCTTCTCTACACCTGGCCTTACCCCACCTAGAATGGGAGACAGCAGCCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR-3UTR CAA 90 bp GGTAAGGCCAGGTGTAGAGAAGGACTCAAGAAGGACTTGCACCTTGCTAAGAAGAGCAACAGACTTCTCTaGGGCCAGAGACCCAACCTT +
Preference number: 3 (lower is better)
Translates to: GKARCREGLKKDLHLAKKSNRLL*GQRPNL
Trigger: AAGGTTGGGTCTCTGGCCCAAGAGAAGTCTGTTGCT...CTTCTTAGCAAGGTGCAAGTCCTTCTTGAGTCCTTCTCTACACCTGGCCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR TCA 72 bp GGGCAGCAGAATGGAGTTTCTTTCATGAAAACAAGCTaGGGGGTGTGCCAAGGTGTGGCAAATGGCCTCACT +
Preference number: 3 (lower is better)
Translates to: GQQNGVSFMKTS*GVCQGVANGLT
Trigger: AGTGAGGCCATTTGCCACACCTTGGCACACCCCTCAGCTTGTTTTCATGAAAGAAACTCCATTCTGCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR TCA 72 bp GAGTGCGCTAAGGGCAGCAGAATGGAGTTTCTTTCATaGAAACAAGCTGAGGGGTGTGCCAAGGTGTGGCAA +
Preference number: 3 (lower is better)
Translates to: ECAKGSRMEFLS*KQAEGCAKVWQ
Trigger: TTGCCACACCTTGGCACACCCCTCAGCTTGTTTTCATGAAAGAAACTCCATTCTGCTGCCCTTAGCGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR GCA 72 bp CCAACAGCACAGGGCTCTTGGTGGTGGCTTTTGGCTTaGTGGTTCTCTATGTTCTTCTGGCTTCATCATGGA +
Preference number: 3 (lower is better)
Translates to: PTAQGSWWWLLA*WFSMFFWLHHG
Trigger: TCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAGCCAAAAGCCACCACCAAGAGCCCTGTGCTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CCA 72 bp CGGACATGTGACCCACCTAGCCAGATACGATCTTCATaGAACAGTTCTGAAGGTGTGGTGAAGGATGTCCTG +
Preference number: 3 (lower is better)
Translates to: RTCDPPSQIRSS*NSSEGVVKDVL
Trigger: CAGGACATCCTTCACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR CCA 72 bp CTTGGACAGCTAGACAAACAGGGATTTTTGGTGGTATaGGCAACTGAGTGCGCTAAGGGCAGCAGAATGGAG +
Preference number: 3 (lower is better)
Translates to: LGQLDKQGFLVV*ATECAKGSRME
Trigger: CTCCATTCTGCTGCCCTTAGCGCACTCAGTTGCCCATACCACCAAAAATCCCTGTTTGTCTAGCTGTCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR-3UTR CAA 90 bp TCAGAAGTTCTGCTGTACTGGGGCTCCTGGCTGGTTTCAGCAACAGACTTCTCTTTTTCTGGTCCTCCATaGGCACAAAGACCTTCTTGC +
Preference number: 3 (lower is better)
Translates to: SEVLLYWGSWLVSATDFSFSGPP*AQRPSC
Trigger: GCAAGAAGGTCTTTGTGCCAATGGAGGACCAGAAAA...AGAGAAGTCTGTTGCTGAAACCAGCCAGGAGCCCCAGTACAGCAGAACTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR TCA 72 bp ATTAAAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTaGAATCTTGAAACGAAATGGGTATACCCAGTTAGA +
Preference number: 3 (lower is better)
Translates to: IKGVRHHCQAEA*NLETKWVYPVR
Trigger: TCTAACTGGGTATACCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR CCA 72 bp TGGTATGGGCAACTGAGTGCGCTAAGGGCAGCAGAATaGAGTTTCTTTCATGAAAACAAGCTGAGGGGTGTG +
Preference number: 3 (lower is better)
Translates to: WYGQLSALRAAE*SFFHENKLRGV
Trigger: CACACCCCTCAGCTTGTTTTCATGAAAGAAACTCCATTCTGCTGCCCTTAGCGCACTCAGTTGCCCATACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR GCA 72 bp AGCTTTTGCCTCCCGAGTGATGGGATTAAAGTTGTGTaGCATCACTGCCCGGCTGAATACATCTTTCTTGGA +
Preference number: 3 (lower is better)
Translates to: SFCLPSDGIKVV*HHCPAEYIFLG
Trigger: TCCAAGAAAGATGTATTCAGCCGGGCAGTGATGGCACACAACTTTAATCCCATCACTCGGGAGGCAAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR CCA 72 bp ATGGAATGTCCAACTCTAAGAGCTAGTGTGCCATATTaGCCCAAGTGTCCCAAAGAAGCCAACCTTTGGCAG +
Preference number: 3 (lower is better)
Translates to: MECPTLRASVPY*PKCPKEANLWQ
Trigger: CTGCCAAAGGTTGGCTTCTTTGGGACACTTGGGCCAATATGGCACACTAGCTCTTAGAGTTGGACATTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR-3UTR CAA 90 bp GAGCCACCATTGCCTGGCTTCATTTACTTTTTAACCATGGAGATGAGACAGGAGAGGCCACCCAGATTGTaGACTATCAGCACCACTGAA +
Preference number: 3 (lower is better)
Translates to: EPPLPGFIYFLTMEMRQERPPRL*TISTTE
Trigger: TTCAGTGGTGCTGATAGTCAACAATCTGGGTGGCCT...CTCCTGTCTCATCTCCATGGTTAAAAAGTAAATGAAGCCAGGCAATGGTGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR TCA 72 bp AGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTaGAGGATGTCCTGTTCCATGCAGAGGTTGGGTGTT +
Preference number: 3 (lower is better)
Translates to: RYDLHGTVLKVW*RMSCSMQRLGV
Trigger: AACACCCAACCTCTGCATGGAACAGGACATCCTTCACCACACCTTCAGAACTGTTCCATGAAGATCGTATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR GCA 72 bp GTGGTCAAGCATAAGAGTGACAATCTGATCAACAGGTaGTATCTTTATCCGACGAACACCAGCTTCCCCATG +
Preference number: 3 (lower is better)
Translates to: VVKHKSDNLINR*YLYPTNTSFPM
Trigger: CATGGGGAAGCTGGTGTTCGTCGGATAAAGATAGCACCTGTTGATCAGATTGTCACTCTTATGCTTGACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR-3UTR CAA 90 bp GCAGCAACTCCACGAAAGCTCCTAAATGTTCTTGAAATTGTTAAATGGAATGTCCAAAGAAGCCAACCTTaGGCAGCACGGCTATGGGTA +
Preference number: 3 (lower is better)
Translates to: AATPRKLLNVLEIVKWNVQRSQP*AARLWV
Trigger: TACCCATAGCCGTGCTGCCAAAGGTTGGCTTCTTTG...GACATTCCATTTAACAATTTCAAGAACATTTAGGAGCTTTCGTGGAGTTGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR CCA 72 bp AAGTTGGCCTGGAAATCCTTACGAGCCACCATTGCCTaGCTTCATTTACTTTTTAACCATGGAGATGAGACA +
Preference number: 3 (lower is better)
Translates to: KLAWKSLRATIA*LHLLFNHGDET
Trigger: TGTCTCATCTCCATGGTTAAAAAGTAAATGAAGCCAGGCAATGGTGGCTCGTAAGGATTTCCAGGCCAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR TCA 72 bp GTGTTTGTCATGTGGTCAAGCATAAGAGTGACAATCTaGTCAACAGGTGCTATCTTTATCCGACGAACACCA +
Preference number: 3 (lower is better)
Translates to: VFVMWSSIRVTI*STGAIFIRRTP
Trigger: TGGTGTTCGTCGGATAAAGATAGCACCTGTTGATCAGATTGTCACTCTTATGCTTGACCACATGACAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS-3UTR GCA 90 bp TGCCCACCAGGGCACGGGCGACCTTCACTCCACGGCCCTCCAGCAAGCGTATGGTGGCTGCCAGGATGCTaGCCACAGGAGGAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: CPPGHGRPSLHGPPASVWWLPGC*PQEERQ
Trigger: TTGCCTCTCCTCCTGTGGGCAGCATCCTGGCAGCCA...CCATACGCTTGCTGGAGGGCCGTGGAGTGAAGGTCGCCCGTGCCCTGGTGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS-3UTR CCA 90 bp TGCCCACCAGGGCACGGGCGACCTTCACTCCACGGCCCTCCAGCAAGCGTATGGAGATGCCCTCGGCCTTaGCCTGCTCCATGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: CPPGHGRPSLHGPPASVWRCPRP*PAPWQV
Trigger: GACTTGCCATGGAGCAGGCCAAGGCCGAGGGCATCT...CCATACGCTTGCTGGAGGGCCGTGGAGTGAAGGTCGCCCGTGCCCTGGTGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS-3UTR TCA 90 bp CTTCAGGGGCTTCTGGAGGCTCTGTGGGAGCTGCCCGAATCCGCTTCCTCCCAGGTGCTACCCGGCCCTTaGGGGTGTCCAGGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LQGLLEALWELPESASSQVLPGP*GCPGQN
Trigger: GTTCTGACCTGGACACCCTCAAGGGCCGGGTAGCAC...CTGGGAGGAAGCGGATTCGGGCAGCTCCCACAGAGCCTCCAGAAGCCCCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS-3UTR GCA 90 bp ATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGAGGAGGGTGCCCACTGTaGCTGCCTGGGCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: ILRRGRTVLPGHVTHLARGGCPL*LPGPQL
Trigger: GAGCTGTGGCCCAGGCAGGCACAGTGGGCACCCTCC...TCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AGGGGCTTCTGGAGGCTCTGTGGGAGCTGCCCGAATCCGCTTCCTCCCAGTCACAGATGCCCTCGGCCTTaGCCTGCTCCATGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: RGFWRLCGSCPNPLPPSHRCPRP*PAPWQV
Trigger: GACTTGCCATGGAGCAGGCCAAGGCCGAGGGCATCT...GTGACTGGGAGGAAGCGGATTCGGGCAGCTCCCACAGAGCCTCCAGAAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS-3UTR GCA 90 bp AGGGGCTTCTGGAGGCTCTGTGGGAGCTGCCCGAATCCGCTTCCTCCCAGTCACCACAGCTCTAATGGCTaGCAGGATGCTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: RGFWRLCGSCPNPLPPSHHSSNG*QDAAHR
Trigger: CCTGTGGGCAGCATCCTGGCAGCCATTAGAGCTGTG...GTGACTGGGAGGAAGCGGATTCGGGCAGCTCCCACAGAGCCTCCAGAAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS-3UTR GCA 90 bp CTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACCGTAGGGCCACACGGTaGCCTTGCAGGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LRRGRTVLPGHVTHLARYRRATR*PCRSCK
Trigger: CTTGCAGCTCCTGCAAGGGCACCGTGTGGCCCTACG...GTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp CCCTCCAGCAAGCGTATGGCAGCATCAGCTATGATGCCCAGTTCCAGGAAAGACGGAGGGTGCCCACTGTaGCTGCCTGGGCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: PSSKRMAASAMMPSSRKDGGCPL*LPGPQL
Trigger: GAGCTGTGGCCCAGGCAGGCACAGTGGGCACCCTCC...GTCTTTCCTGGAACTGGGCATCATAGCTGATGCTGCCATACGCTTGCTGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS-3UTR CCA 90 bp GCCCTGTCCAAGGCATTCAGGTGCTCCTCCAGTCCGATGAGGGTGGTGCATATCGCATGGGCAGGCTCATaGCCTGAGCCTCCACCTGAC +
Preference number: 4 (lower is better)
Translates to: ALSKAFRCSSSPMRVVHIAWAGS*PEPPPD
Trigger: GTCAGGTGGAGGCTCAGGCCATGAGCCTGCCCATGC...GATATGCACCACCCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGACAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS-3UTR CCA 90 bp ATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGAGCATGGGCAGGCTCATaGCCTGAGCCTCCACCTGAC +
Preference number: 4 (lower is better)
Translates to: ILRRGRTVLPGHVTHLARAWAGS*PEPPPD
Trigger: GTCAGGTGGAGGCTCAGGCCATGAGCCTGCCCATGC...TCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp GAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTGGACTGGGAGGAGACTaGCCCCTGGGCTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: EGKNSAARTCDPPSQIRSGLGGD*PLGSSR
Trigger: CCTGGAAGAGCCCAGGGGCCAGTCTCCTCCCAGTCC...AGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR CAA 72 bp GCATCCATGGCAGCAGACCAGGTTGGGAGGTCAGTCTaGGCCTTGAGAGGCTGGGCAGCTGCAGTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ASMAADQVGRSV*ALRGWAAAVRN
Trigger: GTTCCTGACTGCAGCTGCCCAGCCTCTCAAGGCCAAGACTGACCTCCCAACCTGGTCTGCTGCCATGGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
CDS-3UTR TCA 90 bp GAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTGTGCTACCCGGCCCTTaGGGGTGTCCAGGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: EGKNSAARTCDPPSQIRSVLPGP*GCPGQN
Trigger: GTTCTGACCTGGACACCCTCAAGGGCCGGGTAGCAC...AGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp TGTGGTGAAGGATGTCCTGTTCCATGCAGAGGTTGGGTGTTAGGGGGAGGGTGGGTGCTACCCGGCCCTTaGGGGTGTCCAGGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: CGEGCPVPCRGWVLGGGWVLPGP*GCPGQN
Trigger: GTTCTGACCTGGACACCCTCAAGGGCCGGGTAGCAC...CCACCCTCCCCCTAACACCCAACCTCTGCATGGAACAGGACATCCTTCACCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp AGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGGTCAGTCTTGGCCTTaGGAGGCTGGGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RSEGLLILRRGRTVLPGHGQSWP*EAGQLQ
Trigger: CTGCAGCTGCCCAGCCTCTCAAGGCCAAGACTGACC...ATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp GAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTCGTAGGGCCACACGGTaGCCTTGCAGGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: EGKNSAARTCDPPSQIRSRRATR*PCRSCK
Trigger: CTTGCAGCTCCTGCAAGGGCACCGTGTGGCCCTACG...AGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp ACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGGAGGGTGCCCACTGTaGCTGCCTGGGCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: TVLPGHVTHLARYDLHGTGGCPL*LPGPQL
Trigger: GAGCTGTGGCCCAGGCAGGCACAGTGGGCACCCTCC...TGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp AAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGGGCAGCAGCTGCGACTaGTCCAGGGTCTGGCTGATC +
Preference number: 4 (lower is better)
Translates to: KACATTARLRPEILKRNGGSSCD*SRVWLI
Trigger: GATCAGCCAGACCCTGGAGCAGTCGCAGCTGCTGCC...CCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp AGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGGCAGCAGCTGCGACTaGTCCAGGGTCTGGCTGATC +
Preference number: 4 (lower is better)
Translates to: RSEGLLILRRGRTVLPGHGSSCD*SRVWLI
Trigger: GATCAGCCAGACCCTGGAGCAGTCGCAGCTGCTGCC...ATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TGTGGTGAAGGATGTCCTGTTCCATGCAGAGGTTGGGTGTTAGGGGGAGGGTGGGCATGGGCAGGCTCATaGCCTGAGCCTCCACCTGAC +
Preference number: 4 (lower is better)
Translates to: CGEGCPVPCRGWVLGGGWAWAGS*PEPPPD
Trigger: GTCAGGTGGAGGCTCAGGCCATGAGCCTGCCCATGC...CCACCCTCCCCCTAACACCCAACCTCTGCATGGAACAGGACATCCTTCACCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp CTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACCCCACTGTGCCTGCCTaGGCCACAGCTCTAATGGCT +
Preference number: 4 (lower is better)
Translates to: LRRGRTVLPGHVTHLARYPTVPA*ATALMA
Trigger: AGCCATTAGAGCTGTGGCCCAGGCAGGCACAGTGGG...GTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp ATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGAAGATGCCCTCGGCCTTaGCCTGCTCCATGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: ILRRGRTVLPGHVTHLARRCPRP*PAPWQV
Trigger: GACTTGCCATGGAGCAGGCCAAGGCCGAGGGCATCT...TCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AGGGGCTTCTGGAGGCTCTGTGGGAGCTGCCCGAATCCGCTTCCTCCCAGTCACGCACCTGCCACCTTGTaGATAAGTACTGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: RGFWRLCGSCPNPLPPSHAPATL*ISTVPH
Trigger: GTGTGGCACAGTACTTATCCACAAGGTGGCAGGTGC...GTGACTGGGAGGAAGCGGATTCGGGCAGCTCCCACAGAGCCTCCAGAAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS-3UTR CCA 90 bp TGTGGTGAAGGATGTCCTGTTCCATGCAGAGGTTGGGTGTTAGGGGGAGGGTGGGGCTTCAGGGGCTTCTaGAGGCTCTGTGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CGEGCPVPCRGWVLGGGWGFRGF*RLCGSC
Trigger: GCAGCTCCCACAGAGCCTCCAGAAGCCCCTGAAGCC...CCACCCTCCCCCTAACACCCAACCTCTGCATGGAACAGGACATCCTTCACCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGGGCTTCAGGGGCTTCTaGAGGCTCTGTGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KACATTARLRPEILKRNGGFRGF*RLCGSC
Trigger: GCAGCTCCCACAGAGCCTCCAGAAGCCCCTGAAGCC...CCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp CTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGAGGAGACTGGCCCCTaGGCTCTTCCAGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LRRGRTVLPGHVTHLARYEETGP*ALPGLE
Trigger: TTCCAAGCCTGGAAGAGCCCAGGGGCCAGTCTCCTC...GTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp ATAAGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGAGTGCTACCCGGCCCTTaGGGGTGTCCAGGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: IRSEGLLILRRGRTVLPGVLPGP*GCPGQN
Trigger: GTTCTGACCTGGACACCCTCAAGGGCCGGGTAGCAC...TCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp CTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACCGCTCACCCTCTTTGTaGTCTCCTCCAGCCCCATTC +
Preference number: 4 (lower is better)
Translates to: LRRGRTVLPGHVTHLARYRSPSL*SPPAPF
Trigger: GAATGGGGCTGGAGGAGATCACAAAGAGGGTGAGCG...GTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp AAACAAGCTGAGGGGTGTGCCAAGGTGTGGCAAATGGCCTCACTTGGTGAAGGGCGTAGGGCCACACGGTaGCCTTGCAGGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: KQAEGCAKVWQMASLGEGRRATR*PCRSCK
Trigger: CTTGCAGCTCCTGCAAGGGCACCGTGTGGCCCTACG...CCCTTCACCAAGTGAGGCCATTTGCCACACCTTGGCACACCCCTCAGCTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
CDS-3UTR GCA 90 bp AGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCGTAGGGCCACACGGTaGCCTTGCAGGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: RGRTVLPGHVTHLARYDLRRATR*PCRSCK
Trigger: CTTGCAGCTCCTGCAAGGGCACCGTGTGGCCCTACG...AAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp ATAAGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACGTAGGGCCACACGGTaGCCTTGCAGGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: IRSEGLLILRRGRTVLPGRRATR*PCRSCK
Trigger: CTTGCAGCTCCTGCAAGGGCACCGTGTGGCCCTACG...TCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp ACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAGGAGGGTGCCCACTGTaGCTGCCTGGGCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: TGYRRPSRGRGLESFCLPGGCPL*LPGPQL
Trigger: GAGCTGTGGCCCAGGCAGGCACAGTGGGCACCCTCC...TGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp ATCTGGCAGATGTGGGAAGATATGCTATGGACCAGTCTCAGGAACCTTGGGGCTGGAGGGTGCCCACTGTaGCTGCCTGGGCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: IWQMWEDMLWTSLRNLGAGGCPL*LPGPQL
Trigger: GAGCTGTGGCCCAGGCAGGCACAGTGGGCACCCTCC...AGCCCCAAGGTTCCTGAGACTGGTCCATAGCATATCTTCCCACATCTGCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR GCA 90 bp CTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACCTTGGTGGCCTCGGCTaGAGCTTCAGCACTCTTGAC +
Preference number: 4 (lower is better)
Translates to: LRRGRTVLPGHVTHLARYLGGLG*SFSTLD
Trigger: GTCAAGAGTGCTGAAGCTGCAGCCGAGGCCACCAAG...GTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp TGTGGTGAAGGATGTCCTGTTCCATGCAGAGGTTGGGTGTTAGGGGGAGGGTGGGAAGATGGCAGCAGCTaGGACTGCTCCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: CGEGCPVPCRGWVLGGGWEDGSS*DCSRVW
Trigger: CCAGACCCTGGAGCAGTCGCAGCTGCTGCCATCTTC...CCACCCTCCCCCTAACACCCAACCTCTGCATGGAACAGGACATCCTTCACCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTGGCTTCAGGGGCTTCTaGAGGCTCTGTGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGRTVLPGHVTHLARYDLGFRGF*RLCGSC
Trigger: GCAGCTCCCACAGAGCCTCCAGAAGCCCCTGAAGCC...AAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp ATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATTGGCCTTGAGAGGCTaGGCAGCTGCAGTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ILRRGRTVLPGHVTHLARLALRG*AAAVRN
Trigger: GTTCCTGACTGCAGCTGCCCAGCCTCTCAAGGCCAA...TCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp CTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACCTAAGCCGGCATCCATaGCAGCAGACCAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LRRGRTVLPGHVTHLARYLSRHP*QQTRLG
Trigger: TCCCAACCTGGTCTGCTGCCATGGATGCCGGCTTAG...GTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGGGCTCTTCCAGGCTTaGAACTCCTGTGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RSEGLLILRRGRTVLPGHGLFQA*NSCAAA
Trigger: GGCAGCAGCACAGGAGTTCCAAGCCTGGAAGAGCCC...ATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGTGGACTGGGAGGAGACTaGCCCCTGGGCTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SAARTCDPPSQIRSSWNSGLGGD*PLGSSR
Trigger: CCTGGAAGAGCCCAGGGGCCAGTCTCCTCCCAGTCC...ACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp CTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACTGCTTTAGTCAGGACTaGGAGGAGACTGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LRRGRTVLPGHVTHLARYCFSQD*EETGPW
Trigger: CCAGGGGCCAGTCTCCTCCCAGTCCTGACTAAAGCA...GTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp ATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGAGCAAGACCTCCAGGATaGCACGGAAGATGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ILRRGRTVLPGHVTHLARARPPG*HGRWQQ
Trigger: CTGCTGCCATCTTCCGTGCCATCCTGGAGGTCTTGC...TCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp TCTGCAAGACCTCCAGGATGGCACGGAAGATGGCAGCAGCTGCGACTGCTCCAGTGGCAAGTCCAAAGTTaGGCCGATCCCCAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: SARPPGWHGRWQQLRLLQWQVQS*ADPQCS
Trigger: ACTACACTGGGGATCGGCTCAACTTTGGACTTGCCA...CTGGAGCAGTCGCAGCTGCTGCCATCTTCCGTGCCATCCTGGAGGTCTTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
CDS-3UTR TCA 90 bp TGTGGTGAAGGATGTCCTGTTCCATGCAGAGGTTGGGTGTTAGGGGGAGGGTGGCGCTCACCCTCTTTGTaGTCTCCTCCAGCCCCATTC +
Preference number: 4 (lower is better)
Translates to: CGEGCPVPCRGWVLGGGWRSPSL*SPPAPF
Trigger: GAATGGGGCTGGAGGAGATCACAAAGAGGGTGAGCG...CCACCCTCCCCCTAACACCCAACCTCTGCATGGAACAGGACATCCTTCACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp ATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGAGAGACCTTGGCCATGTaGGGCCAGGCTTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: ILRRGRTVLPGHVTHLARETLAM*GQAFAV
Trigger: TACTGCAAAAGCCTGGCCTCACATGGCCAAGGTCTC...TCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp AGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATTCCTTTAGCCAGCCCTaGATGGCTTTGGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: RSEGLLILRRGRTVLPGHSFSQP*MALAAR
Trigger: CCGTGCTGCCAAAGCCATTCAGGGCTGGCTAAAGGA...ATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp ATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATGCCCTTGCAGGAGCTaGAAGTCAGGGTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ILRRGRTVLPGHVTHLARCPCRS*KSGLEA
Trigger: AGCCTCTAACCCTGACTTGCAGCTCCTGCAAGGGCA...TCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp TATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTGGAGGGTGCCCACTGTaGCTGCCTGGGCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: YRRPSRGRGLESFCLPSAGGCPL*LPGPQL
Trigger: GAGCTGTGGCCCAGGCAGGCACAGTGGGCACCCTCC...AGCACTTGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp CTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACTCCAAGGCATTCAGGTaGTCCTCCAGTCCGATGAGG +
Preference number: 4 (lower is better)
Translates to: LRRGRTVLPGHVTHLARYSKAFR*SSSPMR
Trigger: CCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGA...GTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp GAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTGAGAGGCTGGGCAGCTaGAGTCAGGAACAGGCCATA +
Preference number: 4 (lower is better)
Translates to: EGKNSAARTCDPPSQIRSERLGS*SQEQAI
Trigger: TATGGCCTGTTCCTGACTGCAGCTGCCCAGCCTCTC...AGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp ATAAGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGAGAAGATGGCAGCAGCTaGGACTGCTCCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: IRSEGLLILRRGRTVLPGEDGSS*DCSRVW
Trigger: CCAGACCCTGGAGCAGTCGCAGCTGCTGCCATCTTC...TCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TGTGGTGAAGGATGTCCTGTTCCATGCAGAGGTTGGGTGTTAGGGGGAGGGTGGCCGATAAAACCGGCATaGGCAGGCTCATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: CGEGCPVPCRGWVLGGGWPIKPA*AGSWPE
Trigger: CTCAGGCCATGAGCCTGCCCATGCCGGTTTTATCGG...CCACCCTCCCCCTAACACCCAACCTCTGCATGGAACAGGACATCCTTCACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATCCGATAAAACCGGCATaGGCAGGCTCATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RSEGLLILRRGRTVLPGHPIKPA*AGSWPE
Trigger: CTCAGGCCATGAGCCTGCCCATGCCGGTTTTATCGG...ATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp ATAAGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACCCACTGTGCCTGCCTaGGCCACAGCTCTAATGGCT +
Preference number: 4 (lower is better)
Translates to: IRSEGLLILRRGRTVLPGPTVPA*ATALMA
Trigger: AGCCATTAGAGCTGTGGCCCAGGCAGGCACAGTGGG...TCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AAACAAGCTGAGGGGTGTGCCAAGGTGTGGCAAATGGCCTCACTTGGTGAAGGGCCCACTGTGCCTGCCTaGGCCACAGCTCTAATGGCT +
Preference number: 4 (lower is better)
Translates to: KQAEGCAKVWQMASLGEGPTVPA*ATALMA
Trigger: AGCCATTAGAGCTGTGGCCCAGGCAGGCACAGTGGG...CCCTTCACCAAGTGAGGCCATTTGCCACACCTTGGCACACCCCTCAGCTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
CDS-3UTR CCA 90 bp AGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTACCTGGGCAGGGCTaGTTAGAGATGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RSEGLLILRRGRTVLPGHVPGQG*LEMGLP
Trigger: AGGAAGGCCCATCTCTAACCAGCCCTGCCCAGGTAC...ATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGGCAGGACAGACAATCTaGAGAGTACCTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: KACATTARLRPEILKRNGAGQTI*RVPGQG
Trigger: GCCCTGCCCAGGTACTCTCCAGATTGTCTGTCCTGC...CCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TGTGGTGAAGGATGTCCTGTTCCATGCAGAGGTTGGGTGTTAGGGGGAGGGTGGTGCTTTAGTCAGGACTaGGAGGAGACTGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: CGEGCPVPCRGWVLGGGWCFSQD*EETGPW
Trigger: CCAGGGGCCAGTCTCCTCCCAGTCCTGACTAAAGCA...CCACCCTCCCCCTAACACCCAACCTCTGCATGGAACAGGACATCCTTCACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TGTGGTGAAGGATGTCCTGTTCCATGCAGAGGTTGGGTGTTAGGGGGAGGGTGGGCAAGACCTCCAGGATaGCACGGAAGATGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CGEGCPVPCRGWVLGGGWARPPG*HGRWQQ
Trigger: CTGCTGCCATCTTCCGTGCCATCCTGGAGGTCTTGC...CCACCCTCCCCCTAACACCCAACCTCTGCATGGAACAGGACATCCTTCACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGCAAGACCTCCAGGATaGCACGGAAGATGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RSEGLLILRRGRTVLPGHARPPG*HGRWQQ
Trigger: CTGCTGCCATCTTCCGTGCCATCCTGGAGGTCTTGC...ATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR CAA 72 bp CAGGAACCTTGGGGCTTCCCTGAAAGATCTGGTGGCTaGGCTGGGTTCACCCTGCAGGTTGAGGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: QEPWGFPERSGG*AGFTLQVEGLS
Trigger: AGACAGACCCTCAACCTGCAGGGTGAACCCAGCCAAGCCACCAGATCTTTCAGGGAAGCCCCAAGGTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp GCTGAGGGGTGTGCCAAGGTGTGGCAAATGGCCTCACTTGGTGAAGGGAAGCAGTGTAGTTCTTCACAATaGGGAGGGTGCCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: AEGCAKVWQMASLGEGKQCSSSQ*GGCPLC
Trigger: GCACAGTGGGCACCCTCCTCATTGTGAAGAACTACA...CTGCTTCCCTTCACCAAGTGAGGCCATTTGCCACACCTTGGCACACCCCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
CDS-3UTR TCA 90 bp ATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATGGCAAGTCCAAAGTTaGGCCGATCCCCAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: ILRRGRTVLPGHVTHLARWQVQS*ADPQCS
Trigger: ACTACACTGGGGATCGGCTCAACTTTGGACTTGCCA...TCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp CTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCTCTCCAGCGCTGACATaGAGGTGCCCACCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LTGYRRPSRGRGLESFCLSPALT*RCPPGH
Trigger: GTGCCCTGGTGGGCACCTTCATGTCAGCGCTGGAGA...GAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp GCTGTCCAGCCACTAGCTGTTCCTCTGCTTTTCTTGTGGCTTTGGCTTATTGCCTCTCCAGCGCTGACATaGAGGTGCCCACCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: AVQPLAVPLLFLWLWLIASPALT*RCPPGH
Trigger: GTGCCCTGGTGGGCACCTTCATGTCAGCGCTGGAGA...GGCAATAAGCCAAAGCCACAAGAAAAGCAGAGGAACAGCTAGTGGCTGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp GTATGGCTGCTGTCTCCCATTCTAGGTGGGGTAAGGCCAGGTGTAGAGAAGGACTCCTTTAGCCAGCCCTaGATGGCTTTGGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: VWLLSPILGGVRPGVEKDSFSQP*MALAAR
Trigger: CCGTGCTGCCAAAGCCATTCAGGGCTGGCTAAAGGA...GTCCTTCTCTACACCTGGCCTTACCCCACCTAGAATGGGAGACAGCAGCCATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp CTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCGGTCAGTCTTGGCCTTaGGAGGCTGGGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LTGYRRPSRGRGLESFCLGQSWP*EAGQLQ
Trigger: CTGCAGCTGCCCAGCCTCTCAAGGCCAAGACTGACC...GAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp TGTGGTGAAGGATGTCCTGTTCCATGCAGAGGTTGGGTGTTAGGGGGAGGGTGGAGGGTACCCTCTTTGTaGTCTCCTCCAGCCCCATTC +
Preference number: 4 (lower is better)
Translates to: CGEGCPVPCRGWVLGGGWRVPSL*SPPAPF
Trigger: GAATGGGGCTGGAGGAGATCACAAAGAGGGTACCCT...CCACCCTCCCCCTAACACCCAACCTCTGCATGGAACAGGACATCCTTCACCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
CDS-3UTR GCA 90 bp AGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATTGCCCTTGCAGGAGCTaGAAGTCAGGGTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RSEGLLILRRGRTVLPGHCPCRS*KSGLEA
Trigger: AGCCTCTAACCCTGACTTGCAGCTCCTGCAAGGGCA...ATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp ATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGAGAACTCCTGTGCTGCTaGCCACAGAGAATCCAGCAT +
Preference number: 4 (lower is better)
Translates to: ILRRGRTVLPGHVTHLARELLCC*PQRIQH
Trigger: ATGCTGGATTCTCTGTGGGCAGCAGCACAGGAGTTC...TCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp ATAAGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACTTGGTGGCCTCGGCTaGAGCTTCAGCACTCTTGAC +
Preference number: 4 (lower is better)
Translates to: IRSEGLLILRRGRTVLPGLGGLG*SFSTLD
Trigger: GTCAAGAGTGCTGAAGCTGCAGCCGAGGCCACCAAG...TCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp ACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAGCATGGGCAGGCTCATaGCCTGAGCCTCCACCTGAC +
Preference number: 4 (lower is better)
Translates to: TGYRRPSRGRGLESFCLPAWAGS*PEPPPD
Trigger: GTCAGGTGGAGGCTCAGGCCATGAGCCTGCCCATGC...TGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp GTGCAGCCTTTCCATACTTCTGCATGGACTCTAAGCCGGCATCCATGGCAGCAGCCGATAAAACCGGCATaGGCAGGCTCATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: VQPFHTSAWTLSRHPWQQPIKPA*AGSWPE
Trigger: CTCAGGCCATGAGCCTGCCCATGCCGGTTTTATCGG...CTGCTGCCATGGATGCCGGCTTAGAGTCCATGCAGAAGTATGGAAAGGCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
CDS-3UTR CCA 90 bp GGCTCTCGCTGTCCAGCCACTAGCTGTTCCTCTGCTTTTCTTGTGGCTTTGGCTTTGGCCTTGAGAGGCTaGGCAGCTGCAGTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GSRCPATSCSSAFLVALALALRG*AAAVRN
Trigger: GTTCCTGACTGCAGCTGCCCAGCCTCTCAAGGCCAA...AGCCAAAGCCACAAGAAAAGCAGAGGAACAGCTAGTGGCTGGACAGCGAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp TGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGTATACCGGGCTCTTCCAGGCTTaGAACTCCTGTGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: CATTARLRPEILKRNGYTGLFQA*NSCAAA
Trigger: GGCAGCAGCACAGGAGTTCCAAGCCTGGAAGAGCCC...GGTATACCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp ACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGAGGAGACTGGCCCCTaGGCTCTTCCAGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: TVLPGHVTHLARYDLHGTEETGP*ALPGLE
Trigger: TTCCAAGCCTGGAAGAGCCCAGGGGCCAGTCTCCTC...TGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp CTTGCTGGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGCGTCCAGATCCAGGGGACTGGGAGGAGACTaGCCCCTGGGCTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LAGSLCSSGFIMEASRSRGLGGD*PLGSSR
Trigger: CCTGGAAGAGCCCAGGGGCCAGTCTCCTCCCAGTCC...CCTGGATCTGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp ATAAGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGATGCTTTAGTCAGGACTaGGAGGAGACTGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: IRSEGLLILRRGRTVLPGCFSQD*EETGPW
Trigger: CCAGGGGCCAGTCTCCTCCCAGTCCTGACTAAAGCA...TCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR CAA 72 bp CTGGGGCTCCTGGCTGGTTTCAGCAACAGACTTCTCTaGGGCCAGAGACCCAACCTTGCTACTCCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: LGLLAGFSNRLL*GQRPNLATPVA
Trigger: TGCAACTGGAGTAGCAAGGTTGGGTCTCTGGCCCAAGAGAAGTCTGTTGCTGAAACCAGCCAGGAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp GAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTGGCAAGTCCAAAGTTaGGCCGATCCCCAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: EGKNSAARTCDPPSQIRSWQVQS*ADPQCS
Trigger: ACTACACTGGGGATCGGCTCAACTTTGGACTTGCCA...AGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp AGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCGCTCACCCTCTTTGTaGTCTCCTCCAGCCCCATTC +
Preference number: 4 (lower is better)
Translates to: RGLESFCLPSAGIKGVRHRSPSL*SPPAPF
Trigger: GAATGGGGCTGGAGGAGATCACAAAGAGGGTGAGCG...GTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAAAAAGATTCTAGGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp TCCCTGAAAGATCTGGTGGCTTGGCTGGGTTCACCCTGCAGGTTGAGGGTCTGTTGGCAGCATCAGCTATaGTGCCCAGTTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SLKDLVAWLGSPCRLRVCWQHQL*CPVPGK
Trigger: CTTTCCTGGAACTGGGCATCATAGCTGATGCTGCCA...ACAGACCCTCAACCTGCAGGGTGAACCCAGCCAAGCCACCAGATCTTTCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp TATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTTCTCCAGCGCTGACATaGAGGTGCCCACCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: YRRPSRGRGLESFCLPSASPALT*RCPPGH
Trigger: GTGCCCTGGTGGGCACCTTCATGTCAGCGCTGGAGA...AGCACTTGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp ACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACATCCTTTAGCCAGCCCTaGATGGCTTTGGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: TVLPGHVTHLARYDLHGTSFSQP*MALAAR
Trigger: CCGTGCTGCCAAAGCCATTCAGGGCTGGCTAAAGGA...TGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp CTTGCTGGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGCGTCCAGATCCAGGCGTAGGGCCACACGGTaGCCTTGCAGGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LAGSLCSSGFIMEASRSRRRATR*PCRSCK
Trigger: CTTGCAGCTCCTGCAAGGGCACCGTGTGGCCCTACG...CCTGGATCTGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR GCA 90 bp CTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCTGGCTGCCAGGATGCTaGCCACAGGAGGAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LTGYRRPSRGRGLESFCLWLPGC*PQEERQ
Trigger: TTGCCTCTCCTCCTGTGGGCAGCATCCTGGCAGCCA...GAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp TGGGGTAAGGCCAGGTGTAGAGAAGGACTCAAGAAGGACTTGCACCTTGCTAAGTGGCTGCCAGGATGCTaGCCACAGGAGGAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: WGKARCREGLKKDLHLAKWLPGC*PQEERQ
Trigger: TTGCCTCTCCTCCTGTGGGCAGCATCCTGGCAGCCA...CTTAGCAAGGTGCAAGTCCTTCTTGAGTCCTTCTCTACACCTGGCCTTACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR GCA 90 bp ACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACACACAGCTCTAATGGCTaGCAGGATGCTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: TVLPGHVTHLARYDLHGTHSSNG*QDAAHR
Trigger: CCTGTGGGCAGCATCCTGGCAGCCATTAGAGCTGTG...TGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp GGCTCTCGCTGTCCAGCCACTAGCTGTTCCTCTGCTTTTCTTGTGGCTTTGGCTTCCAAGGCATTCAGGTaGTCCTCCAGTCCGATGAGG +
Preference number: 4 (lower is better)
Translates to: GSRCPATSCSSAFLVALASKAFR*SSSPMR
Trigger: CCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGA...AGCCAAAGCCACAAGAAAAGCAGAGGAACAGCTAGTGGCTGGACAGCGAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR GCA 90 bp AGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACGAGAGGCTGGGCAGCTaGAGTCAGGAACAGGCCATA +
Preference number: 4 (lower is better)
Translates to: RGLESFCLPSAGIKGVRHERLGS*SQEQAI
Trigger: TATGGCCTGTTCCTGACTGCAGCTGCCCAGCCTCTC...GTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAAAAAGATTCTAGGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp AAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGTTGGAACTCCTGTGCTaGTGCCCACAGAGAATCCAG +
Preference number: 4 (lower is better)
Translates to: KACATTARLRPEILKRNGLELLC*CPQRIQ
Trigger: CTGGATTCTCTGTGGGCAGCAGCACAGGAGTTCCAA...CCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTGCATGGGCAGGCTCATaGCCTGAGCCTCCACCTGAC +
Preference number: 4 (lower is better)
Translates to: YRRPSRGRGLESFCLPSAAWAGS*PEPPPD
Trigger: GTCAGGTGGAGGCTCAGGCCATGAGCCTGCCCATGC...AGCACTTGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCCGATAAAACCGGCATaGGCAGGCTCATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RGLESFCLPSAGIKGVRHPIKPA*AGSWPE
Trigger: CTCAGGCCATGAGCCTGCCCATGCCGGTTTTATCGG...GTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAAAAAGATTCTAGGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AGGCATCTGGCAGATGTGGGAAGATATGCTATGGACCAGTCTCAGGAACCTTGGCCCACTGTGCCTGCCTaGGCCACAGCTCTAATGGCT +
Preference number: 4 (lower is better)
Translates to: RHLADVGRYAMDQSQEPWPTVPA*ATALMA
Trigger: AGCCATTAGAGCTGTGGCCCAGGCAGGCACAGTGGG...CCAAGGTTCCTGAGACTGGTCCATAGCATATCTTCCCACATCTGCCAGATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp ACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAAGATGCCCTCGGCCTTaGCCTGCTCCATGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: TGYRRPSRGRGLESFCLPRCPRP*PAPWQV
Trigger: GACTTGCCATGGAGCAGGCCAAGGCCGAGGGCATCT...TGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp GCTGTCCAGCCACTAGCTGTTCCTCTGCTTTTCTTGTGGCTTTGGCTTATTGCCAGATGCCCTCGGCCTTaGCCTGCTCCATGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: AVQPLAVPLLFLWLWLIARCPRP*PAPWQV
Trigger: GACTTGCCATGGAGCAGGCCAAGGCCGAGGGCATCT...GGCAATAAGCCAAAGCCACAAGAAAAGCAGAGGAACAGCTAGTGGCTGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp AAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGGCACCTGCCACCTTGTaGATAAGTACTGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: KACATTARLRPEILKRNGAPATL*ISTVPH
Trigger: GTGTGGCACAGTACTTATCCACAAGGTGGCAGGTGC...CCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATTTAGCCAGCCCTGAATaGCTTTGGCAGCACGGCTAT +
Preference number: 4 (lower is better)
Translates to: RSEGLLILRRGRTVLPGHLASPE*LWQHGY
Trigger: ATAGCCGTGCTGCCAAAGCCATTCAGGGCTGGCTAA...ATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGTTAGCCAGCCCTGAATaGCTTTGGCAGCACGGCTAT +
Preference number: 4 (lower is better)
Translates to: KACATTARLRPEILKRNGLASPE*LWQHGY
Trigger: ATAGCCGTGCTGCCAAAGCCATTCAGGGCTGGCTAA...CCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACGTACCTGGGCAGGGCTaGTTAGAGATGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RGLESFCLPSAGIKGVRHVPGQG*LEMGLP
Trigger: AGGAAGGCCCATCTCTAACCAGCCCTGCCCAGGTAC...GTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAAAAAGATTCTAGGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGTATACCGCAGGACAGACAATCTaGAGAGTACCTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: CATTARLRPEILKRNGYTAGQTI*RVPGQG
Trigger: GCCCTGCCCAGGTACTCTCCAGATTGTCTGTCCTGC...GGTATACCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCTAAGCCGGCATCCATaGCAGCAGACCAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: RGLESFCLPSAGIKGVRHLSRHP*QQTRLG
Trigger: TCCCAACCTGGTCTGCTGCCATGGATGCCGGCTTAG...GTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAAAAAGATTCTAGGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TCAGAAGTTCTGCTGTACTGGGGCTCCTGGCTGGTTTCAGCAACAGACTTCTCTGGGCTCTTCCAGGCTTaGAACTCCTGTGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SEVLLYWGSWLVSATDFSGLFQA*NSCAAA
Trigger: GGCAGCAGCACAGGAGTTCCAAGCCTGGAAGAGCCC...AGAGAAGTCTGTTGCTGAAACCAGCCAGGAGCCCCAGTACAGCAGAACTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp CCTCAGAAGTTCTGCTGTACTGGGGCTCCTGGCTGGTTTCAGCAACAGACTTCTTGCTTTAGTCAGGACTaGGAGGAGACTGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PQKFCCTGAPGWFQQQTSCFSQD*EETGPW
Trigger: CCAGGGGCCAGTCTCCTCCCAGTCCTGACTAAAGCA...AGAAGTCTGTTGCTGAAACCAGCCAGGAGCCCCAGTACAGCAGAACTTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp ACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAGGATGGCACGGAAGATaGCAGCAGCTGCGACTGCTC +
Preference number: 4 (lower is better)
Translates to: TGYRRPSRGRGLESFCLPGWHGR*QQLRLL
Trigger: GAGCAGTCGCAGCTGCTGCCATCTTCCGTGCCATCC...TGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp TGGGGTAAGGCCAGGTGTAGAGAAGGACTCAAGAAGGACTTGCACCTTGCTAAGCGCTCACCCTCTTTGTaGTCTCCTCCAGCCCCATTC +
Preference number: 4 (lower is better)
Translates to: WGKARCREGLKKDLHLAKRSPSL*SPPAPF
Trigger: GAATGGGGCTGGAGGAGATCACAAAGAGGGTGAGCG...CTTAGCAAGGTGCAAGTCCTTCTTGAGTCCTTCTCTACACCTGGCCTTACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp CGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTCTCCAGCGCTGACATaGAGGTGCCCACCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: RILTGYRRPSRGRGLESFSPALT*RCPPGH
Trigger: GTGCCCTGGTGGGCACCTTCATGTCAGCGCTGGAGA...AAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp AGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGTGAGACCTTGGCCATGTaGGGCCAGGCTTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: SAARTCDPPSQIRSSWNSETLAM*GQAFAV
Trigger: TACTGCAAAAGCCTGGCCTCACATGGCCAAGGTCTC...ACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp TTTCGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTGGTCAGTCTTGGCCTTaGGAGGCTGGGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FRILTGYRRPSRGRGLESGQSWP*EAGQLQ
Trigger: CTGCAGCTGCCCAGCCTCTCAAGGCCAAGACTGACC...AGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp AGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGTTGCCCTTGCAGGAGCTaGAAGTCAGGGTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SAARTCDPPSQIRSSWNSCPCRS*KSGLEA
Trigger: AGCCTCTAACCCTGACTTGCAGCTCCTGCAAGGGCA...ACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp GACCCACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTGAAGTGGCTGCCAGGATGCTaGCCACAGGAGGAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: DPPSQIRSSWNSSEGVVKWLPGC*PQEERQ
Trigger: TTGCCTCTCCTCCTGTGGGCAGCATCCTGGCAGCCA...CTTCACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp TGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTGTGGCTGCCAGGATGCTaGCCACAGGAGGAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: CDPPSQIRSSWNSSEGVVWLPGC*PQEERQ
Trigger: TTGCCTCTCCTCCTGTGGGCAGCATCCTGGCAGCCA...CACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp CTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCACAGCTCTAATGGCTaGCAGGATGCTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LTGYRRPSRGRGLESFCLHSSNG*QDAAHR
Trigger: CCTGTGGGCAGCATCCTGGCAGCCATTAGAGCTGTG...GAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp GCTGTCCAGCCACTAGCTGTTCCTCTGCTTTTCTTGTGGCTTTGGCTTATTGCCCACAGCTCTAATGGCTaGCAGGATGCTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: AVQPLAVPLLFLWLWLIAHSSNG*QDAAHR
Trigger: CCTGTGGGCAGCATCCTGGCAGCCATTAGAGCTGTG...GGCAATAAGCCAAAGCCACAAGAAAAGCAGAGGAACAGCTAGTGGCTGGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR GCA 90 bp TGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGTATACCTCCAAGGCATTCAGGTaGTCCTCCAGTCCGATGAGG +
Preference number: 4 (lower is better)
Translates to: CATTARLRPEILKRNGYTSKAFR*SSSPMR
Trigger: CCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGA...GGTATACCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp AAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGGCCTTTCCATACTTCTaGATGGACTCTAAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: KACATTARLRPEILKRNGAFPYF*MDSKPA
Trigger: TGCCGGCTTAGAGTCCATGCAGAAGTATGGAAAGGC...CCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp ATAAGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGAGAACTCCTGTGCTGCTaGCCACAGAGAATCCAGCAT +
Preference number: 4 (lower is better)
Translates to: IRSEGLLILRRGRTVLPGELLCC*PQRIQH
Trigger: ATGCTGGATTCTCTGTGGGCAGCAGCACAGGAGTTC...TCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp TTTCGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTGGCAGCAGCTGCGACTaGTCCAGGGTCTGGCTGATC +
Preference number: 4 (lower is better)
Translates to: FRILTGYRRPSRGRGLESGSSCD*SRVWLI
Trigger: GATCAGCCAGACCCTGGAGCAGTCGCAGCTGCTGCC...AGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp GACCCACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTGAAGGAAGATGGCAGCAGCTaGGACTGCTCCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: DPPSQIRSSWNSSEGVVKEDGSS*DCSRVW
Trigger: CCAGACCCTGGAGCAGTCGCAGCTGCTGCCATCTTC...CTTCACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTCCCACTGTGCCTGCCTaGGCCACAGCTCTAATGGCT +
Preference number: 4 (lower is better)
Translates to: YRRPSRGRGLESFCLPSAPTVPA*ATALMA
Trigger: AGCCATTAGAGCTGTGGCCCAGGCAGGCACAGTGGG...AGCACTTGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTGAGATGCCCTCGGCCTTaGCCTGCTCCATGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: CDPPSQIRSSWNSSEGVVRCPRP*PAPWQV
Trigger: GACTTGCCATGGAGCAGGCCAAGGCCGAGGGCATCT...CACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTGCACCTGCCACCTTGTaGATAAGTACTGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: RGRTVLPGHVTHLARYDLAPATL*ISTVPH
Trigger: GTGTGGCACAGTACTTATCCACAAGGTGGCAGGTGC...AAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp GTAAGGCCAGGTGTAGAGAAGGACTCAAGAAGGACTTGCACCTTGCTAAGAAGAGGCTTCAGGGGCTTCTaGAGGCTCTGTGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VRPGVEKDSRRTCTLLRRGFRGF*RLCGSC
Trigger: GCAGCTCCCACAGAGCCTCCAGAAGCCCCTGAAGCC...TCTTCTTAGCAAGGTGCAAGTCCTTCTTGAGTCCTTCTCTACACCTGGCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp AGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTTTAGCCAGCCCTGAATaGCTTTGGCAGCACGGCTAT +
Preference number: 4 (lower is better)
Translates to: RGRTVLPGHVTHLARYDLLASPE*LWQHGY
Trigger: ATAGCCGTGCTGCCAAAGCCATTCAGGGCTGGCTAA...AAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp CTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCGTACCTGGGCAGGGCTaGTTAGAGATGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LTGYRRPSRGRGLESFCLVPGQG*LEMGLP
Trigger: AGGAAGGCCCATCTCTAACCAGCCCTGCCCAGGTAC...GAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGAATCTGGAGAGTACCTaGGCAGGGCTGGTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: KACATTARLRPEILKRNGNLEST*AGLVRD
Trigger: ATCTCTAACCAGCCCTGCCCAGGTACTCTCCAGATT...CCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp ACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAGCAGGACAGACAATCTaGAGAGTACCTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TGYRRPSRGRGLESFCLPAGQTI*RVPGQG
Trigger: GCCCTGCCCAGGTACTCTCCAGATTGTCTGTCCTGC...TGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp ATCTGGCAGATGTGGGAAGATATGCTATGGACCAGTCTCAGGAACCTTGGGGCTGCAGGACAGACAATCTaGAGAGTACCTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: IWQMWEDMLWTSLRNLGAAGQTI*RVPGQG
Trigger: GCCCTGCCCAGGTACTCTCCAGATTGTCTGTCCTGC...AGCCCCAAGGTTCCTGAGACTGGTCCATAGCATATCTTCCCACATCTGCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp TGGGGTAAGGCCAGGTGTAGAGAAGGACTCAAGAAGGACTTGCACCTTGCTAAGCTAAGCCGGCATCCATaGCAGCAGACCAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: WGKARCREGLKKDLHLAKLSRHP*QQTRLG
Trigger: TCCCAACCTGGTCTGCTGCCATGGATGCCGGCTTAG...CTTAGCAAGGTGCAAGTCCTTCTTGAGTCCTTCTCTACACCTGGCCTTACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp CTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACTTCCATACTTCTGCATaGACTCTAAGCCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: LRRGRTVLPGHVTHLARYFHTSA*TLSRHP
Trigger: TGGATGCCGGCTTAGAGTCCATGCAGAAGTATGGAA...GTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp CTTGCTGGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGCGTCCAGATCCAGGGAGGAGACTGGCCCCTaGGCTCTTCCAGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LAGSLCSSGFIMEASRSREETGP*ALPGLE
Trigger: TTCCAAGCCTGGAAGAGCCCAGGGGCCAGTCTCCTC...CCTGGATCTGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CAA 72 bp TGGTGCATATCCGATCCAGCACAAGTGCCATCTGCTTaGATGTTACACCTCCTGCTGCAGTGGCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: WCISDPAQVPSA*MLHLLLQWLQG
Trigger: CCCCTGAAGCCACTGCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCTGGATCGGATATGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR CAA 72 bp GCCATATTGGCCCAAGTGTCCCAAAGAAGCCAACCTTaGGCAGCACGGCTATGGGTAGAACCACAATCCCCA +
Preference number: 4 (lower is better)
Translates to: AILAQVSQRSQP*AARLWVEPQSP
Trigger: TGGGGATTGTGGTTCTACCCATAGCCGTGCTGCCAAAGGTTGGCTTCTTTGGGACACTTGGGCCAATATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
3UTR CAA 72 bp CCTGGTGAGGCTGTCTTTGCCAACAGCACAGGGCTCTaGGTGGTGGCTTTTGGCTTGCTGGTTCTCTATGTT +
Preference number: 4 (lower is better)
Translates to: PGEAVFANSTGL*VVAFGLLVLYV
Trigger: AACATAGAGAACCAGCAAGCCAAAAGCCACCACCAAGAGCCCTGTGCTGTTGGCAAAGACAGCCTCACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp TGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGTATACCTGTAGTTCTTCACAATaGGGAGGGTGCCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: CATTARLRPEILKRNGYTCSSSQ*GGCPLC
Trigger: GCACAGTGGGCACCCTCCTCATTGTGAAGAACTACA...GGTATACCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp AGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGTTGTAGTTCTTCACAATaGGGAGGGTGCCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: SAARTCDPPSQIRSSWNSCSSSQ*GGCPLC
Trigger: GCACAGTGGGCACCCTCCTCATTGTGAAGAACTACA...ACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp AGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACTGGCAAGTCCAAAGTTaGGCCGATCCCCAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: RGLESFCLPSAGIKGVRHWQVQS*ADPQCS
Trigger: ACTACACTGGGGATCGGCTCAACTTTGGACTTGCCA...GTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAAAAAGATTCTAGGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp CCTCAGAAGTTCTGCTGTACTGGGGCTCCTGGCTGGTTTCAGCAACAGACTTCTTGGCAAGTCCAAAGTTaGGCCGATCCCCAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: PQKFCCTGAPGWFQQQTSWQVQS*ADPQCS
Trigger: ACTACACTGGGGATCGGCTCAACTTTGGACTTGCCA...AGAAGTCTGTTGCTGAAACCAGCCAGGAGCCCCAGTACAGCAGAACTTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp ACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACATGGCAGCATCAGCTATaGTGCCCAGTTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: TVLPGHVTHLARYDLHGTWQHQL*CPVPGK
Trigger: CTTTCCTGGAACTGGGCATCATAGCTGATGCTGCCA...TGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp GCTGTCCAGCCACTAGCTGTTCCTCTGCTTTTCTTGTGGCTTTGGCTTATTGCCGAGACCTTGGCCATGTaGGGCCAGGCTTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: AVQPLAVPLLFLWLWLIAETLAM*GQAFAV
Trigger: TACTGCAAAAGCCTGGCCTCACATGGCCAAGGTCTC...GGCAATAAGCCAAAGCCACAAGAAAAGCAGAGGAACAGCTAGTGGCTGGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp TATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTTCCTTTAGCCAGCCCTaGATGGCTTTGGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: YRRPSRGRGLESFCLPSASFSQP*MALAAR
Trigger: CCGTGCTGCCAAAGCCATTCAGGGCTGGCTAAAGGA...AGCACTTGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp TTTTTCTGGTCCTCCATTGGCACAAAGACCTTCTTGCCTTGGTCACACATGTCTGGTCAGTCTTGGCCTTaGGAGGCTGGGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FFWSSIGTKTFLPWSHMSGQSWP*EAGQLQ
Trigger: CTGCAGCTGCCCAGCCTCTCAAGGCCAAGACTGACC...AGACATGTGTGACCAAGGCAAGAAGGTCTTTGTGCCAATGGAGGACCAGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR GCA 90 bp CTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCTGCCCTTGCAGGAGCTaGAAGTCAGGGTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LTGYRRPSRGRGLESFCLCPCRS*KSGLEA
Trigger: AGCCTCTAACCCTGACTTGCAGCTCCTGCAAGGGCA...GAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp TGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTGGAGAGGCTGGGCAGCTaGAGTCAGGAACAGGCCATA +
Preference number: 4 (lower is better)
Translates to: CDPPSQIRSSWNSSEGVVERLGS*SQEQAI
Trigger: TATGGCCTGTTCCTGACTGCAGCTGCCCAGCCTCTC...CACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp TGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGTATACCGAACTCCTGTGCTGCTaGCCACAGAGAATCCAGCAT +
Preference number: 4 (lower is better)
Translates to: CATTARLRPEILKRNGYTELLCC*PQRIQH
Trigger: ATGCTGGATTCTCTGTGGGCAGCAGCACAGGAGTTC...GGTATACCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp CCTCAGAAGTTCTGCTGTACTGGGGCTCCTGGCTGGTTTCAGCAACAGACTTCTTTGGAACTCCTGTGCTaGTGCCCACAGAGAATCCAG +
Preference number: 4 (lower is better)
Translates to: PQKFCCTGAPGWFQQQTSLELLC*CPQRIQ
Trigger: CTGGATTCTCTGTGGGCAGCAGCACAGGAGTTCCAA...AGAAGTCTGTTGCTGAAACCAGCCAGGAGCCCCAGTACAGCAGAACTTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR GCA 90 bp TGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTGCTTGGTGGCCTCGGCTaGAGCTTCAGCACTCTTGAC +
Preference number: 4 (lower is better)
Translates to: CDPPSQIRSSWNSSEGVVLGGLG*SFSTLD
Trigger: GTCAAGAGTGCTGAAGCTGCAGCCGAGGCCACCAAG...CACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp CGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTCCCACTGTGCCTGCCTaGGCCACAGCTCTAATGGCT +
Preference number: 4 (lower is better)
Translates to: RILTGYRRPSRGRGLESFPTVPA*ATALMA
Trigger: AGCCATTAGAGCTGTGGCCCAGGCAGGCACAGTGGG...AAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACGCACCTGCCACCTTGTaGATAAGTACTGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: RGLESFCLPSAGIKGVRHAPATL*ISTVPH
Trigger: GTGTGGCACAGTACTTATCCACAAGGTGGCAGGTGC...GTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAAAAAGATTCTAGGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp CTTGCTGGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGCGTCCAGATCCAGGGTACCTGGGCAGGGCTaGTTAGAGATGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LAGSLCSSGFIMEASRSRVPGQG*LEMGLP
Trigger: AGGAAGGCCCATCTCTAACCAGCCCTGCCCAGGTAC...CCTGGATCTGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp ATAAGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGAAATCTGGAGAGTACCTaGGCAGGGCTGGTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: IRSEGLLILRRGRTVLPGNLEST*AGLVRD
Trigger: ATCTCTAACCAGCCCTGCCCAGGTACTCTCCAGATT...TCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp GTATGGCTGCTGTCTCCCATTCTAGGTGGGGTAAGGCCAGGTGTAGAGAAGGACAATCTGGAGAGTACCTaGGCAGGGCTGGTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: VWLLSPILGGVRPGVEKDNLEST*AGLVRD
Trigger: ATCTCTAACCAGCCCTGCCCAGGTACTCTCCAGATT...GTCCTTCTCTACACCTGGCCTTACCCCACCTAGAATGGGAGACAGCAGCCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp GACCCACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTGAAGTTGGCCTTGAGAGGCTaGGCAGCTGCAGTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: DPPSQIRSSWNSSEGVVKLALRG*AAAVRN
Trigger: GTTCCTGACTGCAGCTGCCCAGCCTCTCAAGGCCAA...CTTCACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTTTGGCCTTGAGAGGCTaGGCAGCTGCAGTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: YRRPSRGRGLESFCLPSALALRG*AAAVRN
Trigger: GTTCCTGACTGCAGCTGCCCAGCCTCTCAAGGCCAA...AGCACTTGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp GACCCACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTGAAGCTAAGCCGGCATCCATaGCAGCAGACCAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: DPPSQIRSSWNSSEGVVKLSRHP*QQTRLG
Trigger: TCCCAACCTGGTCTGCTGCCATGGATGCCGGCTTAG...CTTCACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TGTGGTGAAGGATGTCCTGTTCCATGCAGAGGTTGGGTGTTAGGGGGAGGGTGGTTCCATACTTCTGCATaGACTCTAAGCCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: CGEGCPVPCRGWVLGGGWFHTSA*TLSRHP
Trigger: TGGATGCCGGCTTAGAGTCCATGCAGAAGTATGGAA...CCACCCTCCCCCTAACACCCAACCTCTGCATGGAACAGGACATCCTTCACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp GAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTCATTGTCCTGTCTCCTaGTGCAGCCTTTCCATACTT +
Preference number: 4 (lower is better)
Translates to: EGKNSAARTCDPPSQIRSHCPVS*CSLSIL
Trigger: AAGTATGGAAAGGCTGCACCAGGAGACAGGACAATG...AGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGCATTGTCCTGTCTCCTaGTGCAGCCTTTCCATACTT +
Preference number: 4 (lower is better)
Translates to: KACATTARLRPEILKRNGHCPVS*CSLSIL
Trigger: AAGTATGGAAAGGCTGCACCAGGAGACAGGACAATG...CCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp CGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTGAGGAGACTGGCCCCTaGGCTCTTCCAGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: RILTGYRRPSRGRGLESFEETGP*ALPGLE
Trigger: TTCCAAGCCTGGAAGAGCCCAGGGGCCAGTCTCCTC...AAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp ACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACACTTCCATATTCTTGGTaGCCTCGGCTGCAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: TVLPGHVTHLARYDLHGTLPYSW*PRLQLQ
Trigger: CTGAAGCTGCAGCCGAGGCCACCAAGAATATGGAAG...TGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGTATACCCAGCTTCCATATTCTTaGTGGCCTCGGCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: CATTARLRPEILKRNGYTQLPYS*WPRLQL
Trigger: AAGCTGCAGCCGAGGCCACCAAGAATATGGAAGCTG...GGTATACCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TTTCGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTGGATGGCACGGAAGATaGCAGCAGCTGCGACTGCTC +
Preference number: 4 (lower is better)
Translates to: FRILTGYRRPSRGRGLESGWHGR*QQLRLL
Trigger: GAGCAGTCGCAGCTGCTGCCATCTTCCGTGCCATCC...AGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp CGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTGGATGGCACGGAAGATaGCAGCAGCTGCGACTGCTC +
Preference number: 4 (lower is better)
Translates to: RILTGYRRPSRGRGLESFGWHGR*QQLRLL
Trigger: GAGCAGTCGCAGCTGCTGCCATCTTCCGTGCCATCC...AAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR CAA 72 bp ATGCCCAGTTCCAGGAAAGACAGGCCACCCAGATTGTaGACTATCAGCACCACTGAAGAGCCTGACCGTACA +
Preference number: 4 (lower is better)
Translates to: MPSSRKDRPPRL*TISTTEEPDRT
Trigger: TGTACGGTCAGGCTCTTCAGTGGTGCTGATAGTCAACAATCTGGGTGGCCTGTCTTTCCTGGAACTGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR CAA 72 bp ATGATGCCCAGTTCCAGGAAAGACAGGCCACCCAGATaGTTGACTATCAGCACCACTGAAGAGCCTGACCGT +
Preference number: 4 (lower is better)
Translates to: MMPSSRKDRPPR*LTISTTEEPDR
Trigger: ACGGTCAGGCTCTTCAGTGGTGCTGATAGTCAACAATCTGGGTGGCCTGTCTTTCCTGGAACTGGGCATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
3UTR CAA 72 bp GCCAACAGCACAGGGCTCTTGGTGGTGGCTTTTGGCTaGCTGGTTCTCTATGTTCTTCTGGCTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: ANSTGLLVVAFG*LVLYVLLASSW
Trigger: CCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAGCCAAAAGCCACCACCAAGAGCCCTGTGCTGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp CTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCTGTAGTTCTTCACAATaGGGAGGGTGCCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: LTGYRRPSRGRGLESFCLCSSSQ*GGCPLC
Trigger: GCACAGTGGGCACCCTCCTCATTGTGAAGAACTACA...GAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp ATTGTCCTGTCTCCTGGTGCAGCCTTTCCATACTTCTGCATGGACTCTAAGCCGTGTAGTTCTTCACAATaGGGAGGGTGCCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: IVLSPGAAFPYFCMDSKPCSSSQ*GGCPLC
Trigger: GCACAGTGGGCACCCTCCTCATTGTGAAGAACTACA...CGGCTTAGAGTCCATGCAGAAGTATGGAAAGGCTGCACCAGGAGACAGGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236121.2
CDS-3UTR TCA 90 bp CTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCGGCCACCCAGATTGTTaGCTATCAGCACCACTGAAG +
Preference number: 4 (lower is better)
Translates to: LTGYRRPSRGRGLESFCLGHPDC*LSAPLK
Trigger: CTTCAGTGGTGCTGATAGTCAACAATCTGGGTGGCC...GAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp ACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAGGCCACCCAGATTGTTaGCTATCAGCACCACTGAAG +
Preference number: 4 (lower is better)
Translates to: TGYRRPSRGRGLESFCLPGHPDC*LSAPLK
Trigger: CTTCAGTGGTGCTGATAGTCAACAATCTGGGTGGCC...TGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp TGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGTATACCAAGTGCCATCTGCTTTaGTGTTACACCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CATTARLRPEILKRNGYTKCHLL*CYTSCC
Trigger: GCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTT...GGTATACCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp AGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGTAAGTGCCATCTGCTTTaGTGTTACACCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SAARTCDPPSQIRSSWNSKCHLL*CYTSCC
Trigger: GCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTT...ACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp TCCCTGAAAGATCTGGTGGCTTGGCTGGGTTCACCCTGCAGGTTGAGGGTCTGTGTGAGGCCAGGCTTTTaGAGTAGTTTCAGCATCTAT +
Preference number: 4 (lower is better)
Translates to: SLKDLVAWLGSPCRLRVCVRPGF*SSFSIY
Trigger: ATAGATGCTGAAACTACTGCAAAAGCCTGGCCTCAC...ACAGACCCTCAACCTGCAGGGTGAACCCAGCCAAGCCACCAGATCTTTCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR GCA 90 bp TGTGGTGAAGGATGTCCTGTTCCATGCAGAGGTTGGGTGTTAGGGGGAGGGTGGAGCACAAGTGCCATCTaGTTTGATGTTACACCTCCT +
Preference number: 4 (lower is better)
Translates to: CGEGCPVPCRGWVLGGGWSTSAI*FDVTPP
Trigger: AGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCT...CCACCCTCCCCCTAACACCCAACCTCTGCATGGAACAGGACATCCTTCACCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp GACCCACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTGAAGTCCAAGGCATTCAGGTaGTCCTCCAGTCCGATGAGG +
Preference number: 4 (lower is better)
Translates to: DPPSQIRSSWNSSEGVVKSKAFR*SSSPMR
Trigger: CCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGA...CTTCACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp AGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACGCCTTTCCATACTTCTaGATGGACTCTAAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RGLESFCLPSAGIKGVRHAFPYF*MDSKPA
Trigger: TGCCGGCTTAGAGTCCATGCAGAAGTATGGAAAGGC...GTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAAAAAGATTCTAGGCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp CTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCGCACCTGCCACCTTGTaGATAAGTACTGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: LTGYRRPSRGRGLESFCLAPATL*ISTVPH
Trigger: GTGTGGCACAGTACTTATCCACAAGGTGGCAGGTGC...GAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp CTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGAGGTGTTTGTCATGTaGTCAAGCATAAGAGTGACA +
Preference number: 4 (lower is better)
Translates to: LRRGRTVLPGHVTHLARYEVFVM*SSIRVT
Trigger: TGTCACTCTTATGCTTGACCACATGACAAACACCTC...GTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TCAGAAGTTCTGCTGTACTGGGGCTCCTGGCTGGTTTCAGCAACAGACTTCTCTTTAGCCAGCCCTGAATaGCTTTGGCAGCACGGCTAT +
Preference number: 4 (lower is better)
Translates to: SEVLLYWGSWLVSATDFSLASPE*LWQHGY
Trigger: ATAGCCGTGCTGCCAAAGCCATTCAGGGCTGGCTAA...AGAGAAGTCTGTTGCTGAAACCAGCCAGGAGCCCCAGTACAGCAGAACTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp ACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCACAGCTTCCATATTCTTaGTGGCCTCGGCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TGYRRPSRGRGLESFCLPQLPYS*WPRLQL
Trigger: AAGCTGCAGCCGAGGCCACCAAGAATATGGAAGCTG...TGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp CTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCAGCTTCCATATTCTTaGTGGCCTCGGCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LTGYRRPSRGRGLESFCLQLPYS*WPRLQL
Trigger: AAGCTGCAGCCGAGGCCACCAAGAATATGGAAGCTG...GAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp AATCCTTACGAGCCACCATTGCCTGGCTTCATTTACTTTTTAACCATGGAGATGGTGCTACCCGGCCCTTaGGGGTGTCCAGGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: NPYEPPLPGFIYFLTMEMVLPGP*GCPGQN
Trigger: GTTCTGACCTGGACACCCTCAAGGGCCGGGTAGCAC...CATCTCCATGGTTAAAAAGTAAATGAAGCCAGGCAATGGTGGCTCGTAAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
CDS-3UTR TCA 90 bp CTTGCTGGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGCGTCCAGATCCAGGTGTAGTTCTTCACAATaGGGAGGGTGCCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: LAGSLCSSGFIMEASRSRCSSSQ*GGCPLC
Trigger: GCACAGTGGGCACCCTCCTCATTGTGAAGAACTACA...CCTGGATCTGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp AAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGGACCGTACAGGCACATaGAATATATTGGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: KACATTARLRPEILKRNGDRTGT*NILEVF
Trigger: AAACACCTCCAATATATTTCATGTGCCTGTACGGTC...CCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp GGTAAGGCCAGGTGTAGAGAAGGACTCAAGAAGGACTTGCACCTTGCTAAGAAGGGCCACCCAGATTGTTaGCTATCAGCACCACTGAAG +
Preference number: 4 (lower is better)
Translates to: GKARCREGLKKDLHLAKKGHPDC*LSAPLK
Trigger: CTTCAGTGGTGCTGATAGTCAACAATCTGGGTGGCC...CTTCTTAGCAAGGTGCAAGTCCTTCTTGAGTCCTTCTCTACACCTGGCCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp GACCCACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTGAAGTGGCAGCATCAGCTATaGTGCCCAGTTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: DPPSQIRSSWNSSEGVVKWQHQL*CPVPGK
Trigger: CTTTCCTGGAACTGGGCATCATAGCTGATGCTGCCA...CTTCACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp TTTCGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTGAGACCTTGGCCATGTaGGGCCAGGCTTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: FRILTGYRRPSRGRGLESETLAM*GQAFAV
Trigger: TACTGCAAAAGCCTGGCCTCACATGGCCAAGGTCTC...AGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp AGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTAGCACAAGTGCCATCTaGTTTGATGTTACACCTCCT +
Preference number: 4 (lower is better)
Translates to: RGRTVLPGHVTHLARYDLSTSAI*FDVTPP
Trigger: AGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCT...AAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp TTTTTCTGGTCCTCCATTGGCACAAAGACCTTCTTGCCTTGGTCACACATGTCTGAGAGGCTGGGCAGCTaGAGTCAGGAACAGGCCATA +
Preference number: 4 (lower is better)
Translates to: FFWSSIGTKTFLPWSHMSERLGS*SQEQAI
Trigger: TATGGCCTGTTCCTGACTGCAGCTGCCCAGCCTCTC...AGACATGTGTGACCAAGGCAAGAAGGTCTTTGTGCCAATGGAGGACCAGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR GCA 90 bp AGGCATCTGGCAGATGTGGGAAGATATGCTATGGACCAGTCTCAGGAACCTTGGGCCTTTCCATACTTCTaGATGGACTCTAAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RHLADVGRYAMDQSQEPWAFPYF*MDSKPA
Trigger: TGCCGGCTTAGAGTCCATGCAGAAGTATGGAAAGGC...CCAAGGTTCCTGAGACTGGTCCATAGCATATCTTCCCACATCTGCCAGATGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR GCA 90 bp GTAACTGAGGCATCTGGCAGATGTGGGAAGATATGCTATGGACCAGTCTCAGGAGAACTCCTGTGCTGCTaGCCACAGAGAATCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VTEASGRCGKICYGPVSGELLCC*PQRIQH
Trigger: ATGCTGGATTCTCTGTGGGCAGCAGCACAGGAGTTC...TCCTGAGACTGGTCCATAGCATATCTTCCCACATCTGCCAGATGCCTCAGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp GAGCCACCATTGCCTGGCTTCATTTACTTTTTAACCATGGAGATGAGACAGGAGCCGATAAAACCGGCATaGGCAGGCTCATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: EPPLPGFIYFLTMEMRQEPIKPA*AGSWPE
Trigger: CTCAGGCCATGAGCCTGCCCATGCCGGTTTTATCGG...CTCCTGTCTCATCTCCATGGTTAAAAAGTAAATGAAGCCAGGCAATGGTGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
CDS-3UTR CCA 90 bp TTTTTCTGGTCCTCCATTGGCACAAAGACCTTCTTGCCTTGGTCACACATGTCTCCGATAAAACCGGCATaGGCAGGCTCATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FFWSSIGTKTFLPWSHMSPIKPA*AGSWPE
Trigger: CTCAGGCCATGAGCCTGCCCATGCCGGTTTTATCGG...AGACATGTGTGACCAAGGCAAGAAGGTCTTTGTGCCAATGGAGGACCAGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp TGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGTATACCTTCCATACTTCTGCATaGACTCTAAGCCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: CATTARLRPEILKRNGYTFHTSA*TLSRHP
Trigger: TGGATGCCGGCTTAGAGTCCATGCAGAAGTATGGAA...GGTATACCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTCTTCCATATTCTTGGTaGCCTCGGCTGCAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: YRRPSRGRGLESFCLPSALPYSW*PRLQLQ
Trigger: CTGAAGCTGCAGCCGAGGCCACCAAGAATATGGAAG...AGCACTTGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp GACCCACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTGAAGCTTCCATATTCTTGGTaGCCTCGGCTGCAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: DPPSQIRSSWNSSEGVVKLPYSW*PRLQLQ
Trigger: CTGAAGCTGCAGCCGAGGCCACCAAGAATATGGAAG...CTTCACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR CAA 72 bp CCACCAGCTTTTGCCTCCCGAGTGATGGGATTAAAGTaGTGTGCCATCACTGCCCGGCTGAATACATCTTTC +
Preference number: 4 (lower is better)
Translates to: PPAFASRVMGLK*CAITARLNTSF
Trigger: GAAAGATGTATTCAGCCGGGCAGTGATGGCACACAACTTTAATCCCATCACTCGGGAGGCAAAAGCTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
CDS-3UTR TCA 90 bp ATAAGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGAGACCGTACAGGCACATaGAATATATTGGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: IRSEGLLILRRGRTVLPGDRTGT*NILEVF
Trigger: AAACACCTCCAATATATTTCATGTGCCTGTACGGTC...TCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp TTTCGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTGGCCACCCAGATTGTTaGCTATCAGCACCACTGAAG +
Preference number: 4 (lower is better)
Translates to: FRILTGYRRPSRGRGLESGHPDC*LSAPLK
Trigger: CTTCAGTGGTGCTGATAGTCAACAATCTGGGTGGCC...AGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp TTTCGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTGGCAGCATCAGCTATaGTGCCCAGTTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: FRILTGYRRPSRGRGLESWQHQL*CPVPGK
Trigger: CTTTCCTGGAACTGGGCATCATAGCTGATGCTGCCA...AGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR TCA 90 bp CTTGCTGGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGCGTCCAGATCCAGGAAGTGCCATCTGCTTTaGTGTTACACCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LAGSLCSSGFIMEASRSRKCHLL*CYTSCC
Trigger: GCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTT...CCTGGATCTGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR GCA 90 bp GAGCCACCATTGCCTGGCTTCATTTACTTTTTAACCATGGAGATGAGACAGGAGTGCCCTTGCAGGAGCTaGAAGTCAGGGTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: EPPLPGFIYFLTMEMRQECPCRS*KSGLEA
Trigger: AGCCTCTAACCCTGACTTGCAGCTCCTGCAAGGGCA...CTCCTGTCTCATCTCCATGGTTAAAAAGTAAATGAAGCCAGGCAATGGTGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
CDS-3UTR GCA 90 bp ACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGTGAGGCCAGGCTTTTaGAGTAGTTTCAGCATCTAT +
Preference number: 4 (lower is better)
Translates to: TVLPGHVTHLARYDLHGTVRPGF*SSFSIY
Trigger: ATAGATGCTGAAACTACTGCAAAAGCCTGGCCTCAC...TGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp AGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACAGCACAAGTGCCATCTaGTTTGATGTTACACCTCCT +
Preference number: 4 (lower is better)
Translates to: RGLESFCLPSAGIKGVRHSTSAI*FDVTPP
Trigger: AGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCT...GTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAAAAAGATTCTAGGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp TTTCGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTGGAACTCCTGTGCTaGTGCCCACAGAGAATCCAG +
Preference number: 4 (lower is better)
Translates to: FRILTGYRRPSRGRGLESLELLC*CPQRIQ
Trigger: CTGGATTCTCTGTGGGCAGCAGCACAGGAGTTCCAA...AGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp GTAAGGCCAGGTGTAGAGAAGGACTCAAGAAGGACTTGCACCTTGCTAAGAAGAGCACCTGCCACCTTGTaGATAAGTACTGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: VRPGVEKDSRRTCTLLRRAPATL*ISTVPH
Trigger: GTGTGGCACAGTACTTATCCACAAGGTGGCAGGTGC...TCTTCTTAGCAAGGTGCAAGTCCTTCTTGAGTCCTTCTCTACACCTGGCCTTAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp CTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGCACATGAAATATATTaGAGGTGTTTGTCATGTGGT +
Preference number: 4 (lower is better)
Translates to: LRRGRTVLPGHVTHLARYAHEIY*RCLSCG
Trigger: ACCACATGACAAACACCTCCAATATATTTCATGTGC...GTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp TATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTAATCTGGAGAGTACCTaGGCAGGGCTGGTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: YRRPSRGRGLESFCLPSANLEST*AGLVRD
Trigger: ATCTCTAACCAGCCCTGCCCAGGTACTCTCCAGATT...AGCACTTGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp ATCTGGCAGATGTGGGAAGATATGCTATGGACCAGTCTCAGGAACCTTGGGGCTCATTGTCCTGTCTCCTaGTGCAGCCTTTCCATACTT +
Preference number: 4 (lower is better)
Translates to: IWQMWEDMLWTSLRNLGAHCPVS*CSLSIL
Trigger: AAGTATGGAAAGGCTGCACCAGGAGACAGGACAATG...AGCCCCAAGGTTCCTGAGACTGGTCCATAGCATATCTTCCCACATCTGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp CGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTAAGTGCCATCTGCTTTaGTGTTACACCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RILTGYRRPSRGRGLESFKCHLL*CYTSCC
Trigger: GCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTT...AAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp ACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGAGGTGTTTGTCATGTaGTCAAGCATAAGAGTGACA +
Preference number: 4 (lower is better)
Translates to: TVLPGHVTHLARYDLHGTEVFVM*SSIRVT
Trigger: TGTCACTCTTATGCTTGACCACATGACAAACACCTC...TGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp AGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGCACATGAAATATATTaGAGGTGTTTGTCATGTGGT +
Preference number: 4 (lower is better)
Translates to: RSEGLLILRRGRTVLPGHAHEIY*RCLSCG
Trigger: ACCACATGACAAACACCTCCAATATATTTCATGTGC...ATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
3UTR CAA 72 bp TTTCTGGTCCTCCATTGGCACAAAGACCTTCTTGCCTaGGTCACACATGTCTCTTCTGCTGGTCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: FLVLHWHKDLLA*VTHVSSAGLQI
Trigger: AATCTGCAGACCAGCAGAAGAGACATGTGTGACCAAGGCAAGAAGGTCTTTGTGCCAATGGAGGACCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp TCAGAAGTTCTGCTGTACTGGGGCTCCTGGCTGGTTTCAGCAACAGACTTCTCTGACCGTACAGGCACATaGAATATATTGGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SEVLLYWGSWLVSATDFSDRTGT*NILEVF
Trigger: AAACACCTCCAATATATTTCATGTGCCTGTACGGTC...AGAGAAGTCTGTTGCTGAAACCAGCCAGGAGCCCCAGTACAGCAGAACTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp AATCCTTACGAGCCACCATTGCCTGGCTTCATTTACTTTTTAACCATGGAGATGAGGGTACCCTCTTTGTaGTCTCCTCCAGCCCCATTC +
Preference number: 4 (lower is better)
Translates to: NPYEPPLPGFIYFLTMEMRVPSL*SPPAPF
Trigger: GAATGGGGCTGGAGGAGATCACAAAGAGGGTACCCT...CATCTCCATGGTTAAAAAGTAAATGAAGCCAGGCAATGGTGGCTCGTAAGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
CDS-3UTR GCA 90 bp TTATTTCCTGAAAAACGTGTTTTCTGCCTGCTTGCTTGTTTCTCTTCGCTTTCCCACAGCTCTAATGGCTaGCAGGATGCTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LFPEKRVFCLLACFSSLSHSSNG*QDAAHR
Trigger: CCTGTGGGCAGCATCCTGGCAGCCATTAGAGCTGTG...GGAAAGCGAAGAGAAACAAGCAAGCAGGCAGAAAACACGTTTTTCAGGAAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
CDS-3UTR GCA 90 bp GACCCACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTGAAGGTGAGGCCAGGCTTTTaGAGTAGTTTCAGCATCTAT +
Preference number: 4 (lower is better)
Translates to: DPPSQIRSSWNSSEGVVKVRPGF*SSFSIY
Trigger: ATAGATGCTGAAACTACTGCAAAAGCCTGGCCTCAC...CTTCACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp GTAAGGCCAGGTGTAGAGAAGGACTCAAGAAGGACTTGCACCTTGCTAAGAAGATTCCATACTTCTGCATaGACTCTAAGCCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: VRPGVEKDSRRTCTLLRRFHTSA*TLSRHP
Trigger: TGGATGCCGGCTTAGAGTCCATGCAGAAGTATGGAA...TCTTCTTAGCAAGGTGCAAGTCCTTCTTGAGTCCTTCTCTACACCTGGCCTTAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp TTTCGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTCATTGTCCTGTCTCCTaGTGCAGCCTTTCCATACTT +
Preference number: 4 (lower is better)
Translates to: FRILTGYRRPSRGRGLESHCPVS*CSLSIL
Trigger: AAGTATGGAAAGGCTGCACCAGGAGACAGGACAATG...AGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp CGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTGTGAGGCCAGGCTTTTaGAGTAGTTTCAGCATCTAT +
Preference number: 4 (lower is better)
Translates to: RILTGYRRPSRGRGLESFVRPGF*SSFSIY
Trigger: ATAGATGCTGAAACTACTGCAAAAGCCTGGCCTCAC...AAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp GGTAAGGCCAGGTGTAGAGAAGGACTCAAGAAGGACTTGCACCTTGCTAAGAAGGAGGTGTTTGTCATGTaGTCAAGCATAAGAGTGACA +
Preference number: 4 (lower is better)
Translates to: GKARCREGLKKDLHLAKKEVFVM*SSIRVT
Trigger: TGTCACTCTTATGCTTGACCACATGACAAACACCTC...CTTCTTAGCAAGGTGCAAGTCCTTCTTGAGTCCTTCTCTACACCTGGCCTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR TCA 90 bp TTATTTCCTGAAAAACGTGTTTTCTGCCTGCTTGCTTGTTTCTCTTCGCTTTCCTGGCAAGTCCAAAGTTaGGCCGATCCCCAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: LFPEKRVFCLLACFSSLSWQVQS*ADPQCS
Trigger: ACTACACTGGGGATCGGCTCAACTTTGGACTTGCCA...GGAAAGCGAAGAGAAACAAGCAAGCAGGCAGAAAACACGTTTTTCAGGAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
CDS-3UTR TCA 90 bp CGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTGACCGTACAGGCACATaGAATATATTGGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: RILTGYRRPSRGRGLESFDRTGT*NILEVF
Trigger: AAACACCTCCAATATATTTCATGTGCCTGTACGGTC...AAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR GCA 90 bp TTTTTCTGGTCCTCCATTGGCACAAAGACCTTCTTGCCTTGGTCACACATGTCTAGCACAAGTGCCATCTaGTTTGATGTTACACCTCCT +
Preference number: 4 (lower is better)
Translates to: FFWSSIGTKTFLPWSHMSSTSAI*FDVTPP
Trigger: AGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCT...AGACATGTGTGACCAAGGCAAGAAGGTCTTTGTGCCAATGGAGGACCAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CCA 90 bp ACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAGCACATGAAATATATTaGAGGTGTTTGTCATGTGGT +
Preference number: 4 (lower is better)
Translates to: TGYRRPSRGRGLESFCLPAHEIY*RCLSCG
Trigger: ACCACATGACAAACACCTCCAATATATTTCATGTGC...TGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CCA 90 bp CTTGCTGGTTCTCTATGTTCTTCTGGCTTCATCATGGAAGCGTCCAGATCCAGGGCACATGAAATATATTaGAGGTGTTTGTCATGTGGT +
Preference number: 4 (lower is better)
Translates to: LAGSLCSSGFIMEASRSRAHEIY*RCLSCG
Trigger: ACCACATGACAAACACCTCCAATATATTTCATGTGC...CCTGGATCTGGACGCTTCCATGATGAAGCCAGAAGAACATAGAGAACCAGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
3UTR CAA 72 bp ACCTTAAGTTGGCCTGGAAATCCTTACGAGCCACCATaGCCTGGCTTCATTTACTTTTTAACCATGGAGATG +
Preference number: 4 (lower is better)
Translates to: TLSWPGNPYEPP*PGFIYFLTMEM
Trigger: CATCTCCATGGTTAAAAAGTAAATGAAGCCAGGCAATGGTGGCTCGTAAGGATTTCCAGGCCAACTTAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
CDS-3UTR CAA 90 bp CTTCAGGGGCTTCTGGAGGCTCTGTGGGAGCTGCCCGAATCCGCTTCCTCCCAGGGCCACACGGTGCCCTaGCAGGAGCTGCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: LQGLLEALWELPESASSQGHTVP*QELQVR
Trigger: CCTGACTTGCAGCTCCTGCAAGGGCACCGTGTGGCC...CTGGGAGGAAGCGGATTCGGGCAGCTCCCACAGAGCCTCCAGAAGCCCCTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS-3UTR CAA 90 bp AGGGGCTTCTGGAGGCTCTGTGGGAGCTGCCCGAATCCGCTTCCTCCCAGTCACGAGATGCCCTCGGCCTaGGCCTGCTCCATGGCAAGT +
Preference number: 5 (lower is better)
Translates to: RGFWRLCGSCPNPLPPSHEMPSA*ACSMAS
Trigger: ACTTGCCATGGAGCAGGCCAAGGCCGAGGGCATCTC...GTGACTGGGAGGAAGCGGATTCGGGCAGCTCCCACAGAGCCTCCAGAAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS TCA 90 bp GCTCATGGCCTGAGCCTCCACCTGACAGAAGTGCTACCCGGCCCTTaGGGGTGTCCAGGTCAGAACGTAGGGCCACACGGTGCCCTTGCA +
Preference number: 5 (lower is better)
Translates to: AHGLSLHLTEVLPGP*GCPGQNVGPHGALA
Trigger: TGCAAGGGCACCGTGTGGCCCTACGTTCTGACCTGGACACCCTCAAGGGCCGGGTAGCACTTCTGTCAGGTGGAGGCTCAGGCCATGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS-3UTR CAA 90 bp TGCATGACAGGGAATGAAGCGGGCAGGGGCTCCTGGGAACGGTCAGCGATGCGGAGTGCTACCCGGCCCTaGAGGGTGTCCAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: CMTGNEAGRGSWERSAMRSATRP*RVSRSE
Trigger: TTCTGACCTGGACACCCTCAAGGGCCGGGTAGCACT...CCGCATCGCTGACCGTTCCCAGGAGCCCCTGCCCGCTTCATTCCCTGTCATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CAA 90 bp ATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGAGGCCACACGGTGCCCTaGCAGGAGCTGCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: ILRRGRTVLPGHVTHLARGHTVP*QELQVR
Trigger: CCTGACTTGCAGCTCCTGCAAGGGCACCGTGTGGCC...TCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp CTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACCGCCGGCCTGCCTTCTaGAGGACGGTGAAGGCACTG +
Preference number: 5 (lower is better)
Translates to: LRRGRTVLPGHVTHLARYRRPAF*RTVKAL
Trigger: CAGTGCCTTCACCGTCCTCAAGAAGGCAGGCCGGCG...GTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS GCA 90 bp ACCCGGCCCTTGAGGGTGTCCAGGTCAGAACGTAGGGCCACACGGTaGCCTTGCAGGAGCTGCAAGTCAGGGTTAGAGGCTACTAACCCA +
Preference number: 5 (lower is better)
Translates to: TRPLRVSRSERRATR*PCRSCKSGLEATNP
Trigger: TGGGTTAGTAGCCTCTAACCCTGACTTGCAGCTCCTGCAAGGGCACCGTGTGGCCCTACGTTCTGACCTGGACACCCTCAAGGGCCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS-3UTR CAA 90 bp GAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTGGCCACACGGTGCCCTaGCAGGAGCTGCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: EGKNSAARTCDPPSQIRSGHTVP*QELQVR
Trigger: CCTGACTTGCAGCTCCTGCAAGGGCACCGTGTGGCC...AGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp AAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGGGCCACACGGTGCCCTaGCAGGAGCTGCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: KACATTARLRPEILKRNGGHTVP*QELQVR
Trigger: CCTGACTTGCAGCTCCTGCAAGGGCACCGTGTGGCC...CCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp CTGTCCAAGGCATTCAGGTGCTCCTCCAGTCCGATGAGGGTGGTGCATATCCGACGCCGGCCTGCCTTCTaGAGGACGGTGAAGGCACTG +
Preference number: 5 (lower is better)
Translates to: LSKAFRCSSSPMRVVHIRRRPAF*RTVKAL
Trigger: CAGTGCCTTCACCGTCCTCAAGAAGGCAGGCCGGCG...TCGGATATGCACCACCCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS-3UTR CAA 90 bp TCCCTGAAAGATCTGGTGGCTTGGCTGGGTTCACCCTGCAGGTTGAGGGTCTGTCGCCGGCCTGCCTTCTaGAGGACGGTGAAGGCACTG +
Preference number: 5 (lower is better)
Translates to: SLKDLVAWLGSPCRLRVCRRPAF*RTVKAL
Trigger: CAGTGCCTTCACCGTCCTCAAGAAGGCAGGCCGGCG...ACAGACCCTCAACCTGCAGGGTGAACCCAGCCAAGCCACCAGATCTTTCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS CCA 90 bp CCTGTTAGCATCCCTTTCCCGATAAAACCGGCATGGGCAGGCTCATaGCCTGAGCCTCCACCTGACAGAAGTGCTACCCGGCCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: PVSIPFPIKPAWAGS*PEPPPDRSATRPLR
Trigger: CCTCAAGGGCCGGGTAGCACTTCTGTCAGGTGGAGGCTCAGGCCATGAGCCTGCCCATGCCGGTTTTATCGGGAAAGGGATGCTAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS-3UTR CAA 90 bp ATAAGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGAGGCCACACGGTGCCCTaGCAGGAGCTGCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: IRSEGLLILRRGRTVLPGGHTVP*QELQVR
Trigger: CCTGACTTGCAGCTCCTGCAAGGGCACCGTGTGGCC...TCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp TGTGGTGAAGGATGTCCTGTTCCATGCAGAGGTTGGGTGTTAGGGGGAGGGTGGGAGATGCCCTCGGCCTaGGCCTGCTCCATGGCAAGT +
Preference number: 5 (lower is better)
Translates to: CGEGCPVPCRGWVLGGGWEMPSA*ACSMAS
Trigger: ACTTGCCATGGAGCAGGCCAAGGCCGAGGGCATCTC...CCACCCTCCCCCTAACACCCAACCTCTGCATGGAACAGGACATCCTTCACCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp ATAAGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACGCCGGCCTGCCTTCTaGAGGACGGTGAAGGCACTG +
Preference number: 5 (lower is better)
Translates to: IRSEGLLILRRGRTVLPGRRPAF*RTVKAL
Trigger: CAGTGCCTTCACCGTCCTCAAGAAGGCAGGCCGGCG...TCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp ATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGAAGGTCAGTCTTGGCCTaGAGAGGCTGGGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: ILRRGRTVLPGHVTHLARRSVLA*RGWAAA
Trigger: TGCAGCTGCCCAGCCTCTCAAGGCCAAGACTGACCT...TCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp CTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACAGGTCAGTCTTGGCCTaGAGAGGCTGGGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: LRRGRTVLPGHVTHLARYRSVLA*RGWAAA
Trigger: TGCAGCTGCCCAGCCTCTCAAGGCCAAGACTGACCT...GTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp CTGTCCAAGGCATTCAGGTGCTCCTCCAGTCCGATGAGGGTGGTGCATATCCGAAGTGCTACCCGGCCCTaGAGGGTGTCCAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: LSKAFRCSSSPMRVVHIRSATRP*RVSRSE
Trigger: TTCTGACCTGGACACCCTCAAGGGCCGGGTAGCACT...TCGGATATGCACCACCCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS-3UTR CAA 90 bp AAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGGTTGGGAGGTCAGTCTaGGCCTTGAGAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: KACATTARLRPEILKRNGVGRSV*ALRGWA
Trigger: TGCCCAGCCTCTCAAGGCCAAGACTGACCTCCCAAC...CCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp TCCCTGAAAGATCTGGTGGCTTGGCTGGGTTCACCCTGCAGGTTGAGGGTCTGTTGGCAGCAGACCAGGTaGGGAGGTCAGTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SLKDLVAWLGSPCRLRVCWQQTR*GGQSWP
Trigger: AGGCCAAGACTGACCTCCCAACCTGGTCTGCTGCCA...ACAGACCCTCAACCTGCAGGGTGAACCCAGCCAAGCCACCAGATCTTTCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS GCA 90 bp GTGTCCAGGTCAGAACGTAGGGCCACACGGTGCCCTTGCAGGAGCTaGAAGTCAGGGTTAGAGGCTACTAACCCAGCAAGGGCATCATCA +
Preference number: 5 (lower is better)
Translates to: VSRSERRATRCPCRS*KSGLEATNPARASS
Trigger: TGATGATGCCCTTGCTGGGTTAGTAGCCTCTAACCCTGACTTGCAGCTCCTGCAAGGGCACCGTGTGGCCCTACGTTCTGACCTGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS CCA 90 bp CCTGCGATGACACCTGTTAGCATCCCTTTCCCGATAAAACCGGCATaGGCAGGCTCATGGCCTGAGCCTCCACCTGACAGAAGTGCTACC +
Preference number: 5 (lower is better)
Translates to: PAMTPVSIPFPIKPA*AGSWPEPPPDRSAT
Trigger: GGTAGCACTTCTGTCAGGTGGAGGCTCAGGCCATGAGCCTGCCCATGCCGGTTTTATCGGGAAAGGGATGCTAACAGGTGTCATCGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS-3UTR CAA 90 bp ATAAGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGAAGTGCTACCCGGCCCTaGAGGGTGTCCAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: IRSEGLLILRRGRTVLPGSATRP*RVSRSE
Trigger: TTCTGACCTGGACACCCTCAAGGGCCGGGTAGCACT...TCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp AGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGTGAGATGCCCTCGGCCTaGGCCTGCTCCATGGCAAGT +
Preference number: 5 (lower is better)
Translates to: SAARTCDPPSQIRSSWNSEMPSA*ACSMAS
Trigger: ACTTGCCATGGAGCAGGCCAAGGCCGAGGGCATCTC...ACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp GATCCAGCACAAGTGCCATCTGCTTTGATGTTACACCTCCTGCTGCAGTGGCTTCGCCGGCCTGCCTTCTaGAGGACGGTGAAGGCACTG +
Preference number: 5 (lower is better)
Translates to: DPAQVPSALMLHLLLQWLRRPAF*RTVKAL
Trigger: CAGTGCCTTCACCGTCCTCAAGAAGGCAGGCCGGCG...AAGCCACTGCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCTGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS-3UTR CAA 90 bp AGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTAGGTCAGTCTTGGCCTaGAGAGGCTGGGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: RGRTVLPGHVTHLARYDLRSVLA*RGWAAA
Trigger: TGCAGCTGCCCAGCCTCTCAAGGCCAAGACTGACCT...AAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp GGCTCTCGCTGTCCAGCCACTAGCTGTTCCTCTGCTTTTCTTGTGGCTTTGGCTGTTGGGAGGTCAGTCTaGGCCTTGAGAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GSRCPATSCSSAFLVALAVGRSV*ALRGWA
Trigger: TGCCCAGCCTCTCAAGGCCAAGACTGACCTCCCAAC...AGCCAAAGCCACAAGAAAAGCAGAGGAACAGCTAGTGGCTGGACAGCGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CAA 90 bp AAGGCGTGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGCCAGCTTCCATATTCTaGGTGGCCTCGGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: KACATTARLRPEILKRNGPASIF*VASAAA
Trigger: AGCTGCAGCCGAGGCCACCAAGAATATGGAAGCTGG...CCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCACGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS GCA 90 bp TTTCATCAGCTGCAAGCTCAAAGGTGTGTGTGGCGCCAGGGACACTaGAGGATGACAAGCTCACCCCTAGGGTACCCATGGTCTTGGCGA +
Preference number: 5 (lower is better)
Translates to: FHQLQAQRCVWRQGH*RMTSSPLGYPWSWR
Trigger: TCGCCAAGACCATGGGTACCCTAGGGGTGAGCTTGTCATCCTGCAGTGTCCCTGGCGCCACACACACCTTTGAGCTTGCAGCTGATGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS CCA 90 bp CCAGGCCTAGCTCTATTTCATCAGCTGCAAGCTCAAAGGTGTGTGTaGCGCCAGGGACACTGCAGGATGACAAGCTCACCCCTAGGGTAC +
Preference number: 5 (lower is better)
Translates to: PGLALFHQLQAQRCV*RQGHCRMTSSPLGY
Trigger: GTACCCTAGGGGTGAGCTTGTCATCCTGCAGTGTCCCTGGCGCCACACACACCTTTGAGCTTGCAGCTGATGAAATAGAGCTAGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS-3UTR CAA 90 bp GATCCAGCACAAGTGCCATCTGCTTTGATGTTACACCTCCTGCTGCAGTGGCTTGAGATGCCCTCGGCCTaGGCCTGCTCCATGGCAAGT +
Preference number: 5 (lower is better)
Translates to: DPAQVPSALMLHLLLQWLEMPSA*ACSMAS
Trigger: ACTTGCCATGGAGCAGGCCAAGGCCGAGGGCATCTC...AAGCCACTGCAGCAGGAGGTGTAACATCAAAGCAGATGGCACTTGTGCTGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS-3UTR CAA 90 bp GCTGTCCAGCCACTAGCTGTTCCTCTGCTTTTCTTGTGGCTTTGGCTTATTGCCGAGATGCCCTCGGCCTaGGCCTGCTCCATGGCAAGT +
Preference number: 5 (lower is better)
Translates to: AVQPLAVPLLFLWLWLIAEMPSA*ACSMAS
Trigger: ACTTGCCATGGAGCAGGCCAAGGCCGAGGGCATCTC...GGCAATAAGCCAAAGCCACAAGAAAAGCAGAGGAACAGCTAGTGGCTGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CAA 90 bp TATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTCGCCGGCCTGCCTTCTaGAGGACGGTGAAGGCACTG +
Preference number: 5 (lower is better)
Translates to: YRRPSRGRGLESFCLPSARRPAF*RTVKAL
Trigger: CAGTGCCTTCACCGTCCTCAAGAAGGCAGGCCGGCG...AGCACTTGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp GCCCTGTCCAAGGCATTCAGGTGCTCCTCCAGTCCGATGAGGGTGGTGCATATCAGAGCACCTGCCACCTaGTGGATAAGTACTGTGCCA +
Preference number: 5 (lower is better)
Translates to: ALSKAFRCSSSPMRVVHIRAPAT*WISTVP
Trigger: TGGCACAGTACTTATCCACAAGGTGGCAGGTGCTCT...GATATGCACCACCCTCATCGGACTGGAGGAGCACCTGAATGCCTTGGACAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235285.2
ENSMUST00000236121.2
CDS-3UTR CAA 90 bp AGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGTGTTGGGAGGTCAGTCTaGGCCTTGAGAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SAARTCDPPSQIRSSWNSVGRSV*ALRGWA
Trigger: TGCCCAGCCTCTCAAGGCCAAGACTGACCTCCCAAC...ACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp TGCGCCACCACTGCCAGGCTGAGGCCTGAAATCTTGAAACGAAATGGGTATACCTGGCAGCAGACCAGGTaGGGAGGTCAGTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: CATTARLRPEILKRNGYTWQQTR*GGQSWP
Trigger: AGGCCAAGACTGACCTCCCAACCTGGTCTGCTGCCA...GGTATACCCATTTCGTTTCAAGATTTCAGGCCTCAGCCTGGCAGTGGTGGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp AGAGGCCTAGAATCTTTTTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACTGGCAGCAGACCAGGTaGGGAGGTCAGTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: RGLESFCLPSAGIKGVRHWQQTR*GGQSWP
Trigger: AGGCCAAGACTGACCTCCCAACCTGGTCTGCTGCCA...GTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAAAAAGATTCTAGGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp ACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACATGGCAGCAGACCAGGTaGGGAGGTCAGTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: TVLPGHVTHLARYDLHGTWQQTR*GGQSWP
Trigger: AGGCCAAGACTGACCTCCCAACCTGGTCTGCTGCCA...TGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp ATAAGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACCAGCTTCCATATTCTaGGTGGCCTCGGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: IRSEGLLILRRGRTVLPGPASIF*VASAAA
Trigger: AGCTGCAGCCGAGGCCACCAAGAATATGGAAGCTGG...TCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp CTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCAGTGCTACCCGGCCCTaGAGGGTGTCCAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: LTGYRRPSRGRGLESFCLSATRP*RVSRSE
Trigger: TTCTGACCTGGACACCCTCAAGGGCCGGGTAGCACT...GAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp AGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGACATGACAGGCCACCCAGATaGTTGACTATCAGCACCACT +
Preference number: 5 (lower is better)
Translates to: RSEGLLILRRGRTVLPGHDRPPR*LTISTT
Trigger: AGTGGTGCTGATAGTCAACAATCTGGGTGGCCTGTC...ATGTCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp AGGCATCTGGCAGATGTGGGAAGATATGCTATGGACCAGTCTCAGGAACCTTGGAGGTCAGTCTTGGCCTaGAGAGGCTGGGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: RHLADVGRYAMDQSQEPWRSVLA*RGWAAA
Trigger: TGCAGCTGCCCAGCCTCTCAAGGCCAAGACTGACCT...CCAAGGTTCCTGAGACTGGTCCATAGCATATCTTCCCACATCTGCCAGATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CAA 90 bp GACCCACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTGAAGAGTGCTACCCGGCCCTaGAGGGTGTCCAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: DPPSQIRSSWNSSEGVVKSATRP*RVSRSE
Trigger: TTCTGACCTGGACACCCTCAAGGGCCGGGTAGCACT...CTTCACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp TGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGTTCTGAAGGTGTGGTGAGTGCTACCCGGCCCTaGAGGGTGTCCAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: CDPPSQIRSSWNSSEGVVSATRP*RVSRSE
Trigger: TTCTGACCTGGACACCCTCAAGGGCCGGGTAGCACT...CACCACACCTTCAGAACTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp AAACAAGCTGAGGGGTGTGCCAAGGTGTGGCAAATGGCCTCACTTGGTGAAGGGAGAGCACCTGCCACCTaGTGGATAAGTACTGTGCCA +
Preference number: 5 (lower is better)
Translates to: KQAEGCAKVWQMASLGEGRAPAT*WISTVP
Trigger: TGGCACAGTACTTATCCACAAGGTGGCAGGTGCTCT...CCCTTCACCAAGTGAGGCCATTTGCCACACCTTGGCACACCCCTCAGCTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235285.2
CDS-3UTR CAA 90 bp ATAAGATCTGAGGGACTCCTCATCCTGAGGAGGGGAAGAACAGTGCTGCCCGGAAGAGCACCTGCCACCTaGTGGATAAGTACTGTGCCA +
Preference number: 5 (lower is better)
Translates to: IRSEGLLILRRGRTVLPGRAPAT*WISTVP
Trigger: TGGCACAGTACTTATCCACAAGGTGGCAGGTGCTCT...TCCGGGCAGCACTGTTCTTCCCCTCCTCAGGATGAGGAGTCCCTCAGATCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp TGTGGTGAAGGATGTCCTGTTCCATGCAGAGGTTGGGTGTTAGGGGGAGGGTGGAGGCCACCCAGATTGTaGACTATCAGCACCACTGAA +
Preference number: 5 (lower is better)
Translates to: CGEGCPVPCRGWVLGGGWRPPRL*TISTTE
Trigger: TTCAGTGGTGCTGATAGTCAACAATCTGGGTGGCCT...CCACCCTCCCCCTAACACCCAACCTCTGCATGGAACAGGACATCCTTCACCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp AGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTACAGAGAATCCAGCATaGTCCTGTCTCCTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: RGRTVLPGHVTHLARYDLTENPA*SCLLVQ
Trigger: CTGCACCAGGAGACAGGACAATGCTGGATTCTCTGT...AAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp CTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAGCTTCCATATTCTaGGTGGCCTCGGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LTGYRRPSRGRGLESFCLPASIF*VASAAA
Trigger: AGCTGCAGCCGAGGCCACCAAGAATATGGAAGCTGG...GAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp AGGGGAAGAACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTAGGCCACCCAGATTGTaGACTATCAGCACCACTGAA +
Preference number: 5 (lower is better)
Translates to: RGRTVLPGHVTHLARYDLRPPRL*TISTTE
Trigger: TTCAGTGGTGCTGATAGTCAACAATCTGGGTGGCCT...AAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGTTCTTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp ACAGTGCTGCCCGGACATGTGACCCACCTAGCCAGATACGATCTTCATGGAACAGACAGGCCACCCAGATaGTTGACTATCAGCACCACT +
Preference number: 5 (lower is better)
Translates to: TVLPGHVTHLARYDLHGTDRPPR*LTISTT
Trigger: AGTGGTGCTGATAGTCAACAATCTGGGTGGCCTGTC...TGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp CCTCAGAAGTTCTGCTGTACTGGGGCTCCTGGCTGGTTTCAGCAACAGACTTCTACAGAGAATCCAGCATaGTCCTGTCTCCTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: PQKFCCTGAPGWFQQQTSTENPA*SCLLVQ
Trigger: CTGCACCAGGAGACAGGACAATGCTGGATTCTCTGT...AGAAGTCTGTTGCTGAAACCAGCCAGGAGCCCCAGTACAGCAGAACTTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CAA 90 bp CTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCAGAGCACCTGCCACCTaGTGGATAAGTACTGTGCCA +
Preference number: 5 (lower is better)
Translates to: LTGYRRPSRGRGLESFCLRAPAT*WISTVP
Trigger: TGGCACAGTACTTATCCACAAGGTGGCAGGTGCTCT...GAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp GCTGTCCAGCCACTAGCTGTTCCTCTGCTTTTCTTGTGGCTTTGGCTTATTGCCAGAGCACCTGCCACCTaGTGGATAAGTACTGTGCCA +
Preference number: 5 (lower is better)
Translates to: AVQPLAVPLLFLWLWLIARAPAT*WISTVP
Trigger: TGGCACAGTACTTATCCACAAGGTGGCAGGTGCTCT...GGCAATAAGCCAAAGCCACAAGAAAAGCAGAGGAACAGCTAGTGGCTGGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CAA 90 bp ACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTTGCCTCCCAAGGCCACCCAGATTGTaGACTATCAGCACCACTGAA +
Preference number: 5 (lower is better)
Translates to: TGYRRPSRGRGLESFCLPRPPRL*TISTTE
Trigger: TTCAGTGGTGCTGATAGTCAACAATCTGGGTGGCCT...TGGGAGGCAAAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp CGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTAGAGCACCTGCCACCTaGTGGATAAGTACTGTGCCA +
Preference number: 5 (lower is better)
Translates to: RILTGYRRPSRGRGLESFRAPAT*WISTVP
Trigger: TGGCACAGTACTTATCCACAAGGTGGCAGGTGCTCT...AAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp GTAACTGAGGCATCTGGCAGATGTGGGAAGATATGCTATGGACCAGTCTCAGGAAGGCCACCCAGATTGTaGACTATCAGCACCACTGAA +
Preference number: 5 (lower is better)
Translates to: VTEASGRCGKICYGPVSGRPPRL*TISTTE
Trigger: TTCAGTGGTGCTGATAGTCAACAATCTGGGTGGCCT...TCCTGAGACTGGTCCATAGCATATCTTCCCACATCTGCCAGATGCCTCAGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS-3UTR CAA 90 bp CGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTGACAGGCCACCCAGATaGTTGACTATCAGCACCACT +
Preference number: 5 (lower is better)
Translates to: RILTGYRRPSRGRGLESFDRPPR*LTISTT
Trigger: AGTGGTGCTGATAGTCAACAATCTGGGTGGCCTGTC...AAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp CGTATACTGACTGGGTATAGGAGGCCTTCCAGAGGAAGAGGCCTAGAATCTTTTACAGAGAATCCAGCATaGTCCTGTCTCCTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: RILTGYRRPSRGRGLESFTENPA*SCLLVQ
Trigger: CTGCACCAGGAGACAGGACAATGCTGGATTCTCTGT...AAAAGATTCTAGGCCTCTTCCTCTGGAAGGCCTCCTATACCCAGTCAGTATACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
CDS-3UTR CAA 90 bp TTTTTCTGGTCCTCCATTGGCACAAAGACCTTCTTGCCTTGGTCACACATGTCTGACAGGCCACCCAGATaGTTGACTATCAGCACCACT +
Preference number: 5 (lower is better)
Translates to: FFWSSIGTKTFLPWSHMSDRPPR*LTISTT
Trigger: AGTGGTGCTGATAGTCAACAATCTGGGTGGCCTGTC...AGACATGTGTGACCAAGGCAAGAAGGTCTTTGTGCCAATGGAGGACCAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237788.2
CDS CAA 90 bp GGCTCATGGCCTGAGCCTCCACCTGACAGAAGTGCTACCCGGCCCTaGAGGGTGTCCAGGTCAGAACGTAGGGCCACACGGTGCCCTTGC +
Preference number: 6 (lower is better)
Translates to: GSWPEPPPDRSATRP*RVSRSERRATRCPC
Trigger: GCAAGGGCACCGTGTGGCCCTACGTTCTGACCTGGACACCCTCAAGGGCCGGGTAGCACTTCTGTCAGGTGGAGGCTCAGGCCATGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS CAA 72 bp CCTGAGCCTCCACCTGACAGAAGTGCTACCCGGCCCTaGAGGGTGTCCAGGTCAGAACGTAGGGCCACACGG +
Preference number: 6 (lower is better)
Translates to: PEPPPDRSATRP*RVSRSERRATR
Trigger: CCGTGTGGCCCTACGTTCTGACCTGGACACCCTCAAGGGCCGGGTAGCACTTCTGTCAGGTGGAGGCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS TCA 72 bp CTGAGCCTCCACCTGACAGAAGTGCTACCCGGCCCTTaGGGGTGTCCAGGTCAGAACGTAGGGCCACACGGT +
Preference number: 6 (lower is better)
Translates to: LSLHLTEVLPGP*GCPGQNVGPHG
Trigger: ACCGTGTGGCCCTACGTTCTGACCTGGACACCCTCAAGGGCCGGGTAGCACTTCTGTCAGGTGGAGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS CCA 72 bp CCCATTCCTTCCTCAGCCAGAGCACCTGCCACCTTGTaGATAAGTACTGTGCCACACAGGCCACGCCGGCCT +
Preference number: 6 (lower is better)
Translates to: PIPSSARAPATL*ISTVPHRPRRP
Trigger: AGGCCGGCGTGGCCTGTGTGGCACAGTACTTATCCACAAGGTGGCAGGTGCTCTGGCTGAGGAAGGAATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS GCA 72 bp CTGCAAGCTCAAAGGTGTGTGTGGCGCCAGGGACACTaGAGGATGACAAGCTCACCCCTAGGGTACCCATGG +
Preference number: 6 (lower is better)
Translates to: LQAQRCVWRQGH*RMTSSPLGYPW
Trigger: CCATGGGTACCCTAGGGGTGAGCTTGTCATCCTGCAGTGTCCCTGGCGCCACACACACCTTTGAGCTTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS CCA 72 bp ATCCCTTTCCCGATAAAACCGGCATGGGCAGGCTCATaGCCTGAGCCTCCACCTGACAGAAGTGCTACCCGG +
Preference number: 6 (lower is better)
Translates to: IPFPIKPAWAGS*PEPPPDRSATR
Trigger: CCGGGTAGCACTTCTGTCAGGTGGAGGCTCAGGCCATGAGCCTGCCCATGCCGGTTTTATCGGGAAAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS GCA 72 bp TCAGAACGTAGGGCCACACGGTGCCCTTGCAGGAGCTaGAAGTCAGGGTTAGAGGCTACTAACCCAGCAAGG +
Preference number: 6 (lower is better)
Translates to: SERRATRCPCRS*KSGLEATNPAR
Trigger: CCTTGCTGGGTTAGTAGCCTCTAACCCTGACTTGCAGCTCCTGCAAGGGCACCGTGTGGCCCTACGTTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS GCA 72 bp GTGTCCAGGTCAGAACGTAGGGCCACACGGTGCCCTTaGAGGAGCTGCAAGTCAGGGTTAGAGGCTACTAAC +
Preference number: 6 (lower is better)
Translates to: VSRSERRATRCP*RSCKSGLEATN
Trigger: GTTAGTAGCCTCTAACCCTGACTTGCAGCTCCTGCAAGGGCACCGTGTGGCCCTACGTTCTGACCTGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS GCA 72 bp ATCACCATCTCCACAGAGATGCCCTCGGCCTTGGCCTaGTCCATGGCAAGTCCAAAGTTGAGCCGATCCCCA +
Preference number: 6 (lower is better)
Translates to: ITISTEMPSALA*SMASPKLSRSP
Trigger: TGGGGATCGGCTCAACTTTGGACTTGCCATGGAGCAGGCCAAGGCCGAGGGCATCTCTGTGGAGATGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS CAA 72 bp AGTACTGTGCCACACAGGCCACGCCGGCCTGCCTTCTaGAGGACGGTGAAGGCACTGTCATCCTCAACTATC +
Preference number: 6 (lower is better)
Translates to: STVPHRPRRPAF*RTVKALSSSTI
Trigger: GATAGTTGAGGATGACAGTGCCTTCACCGTCCTCAAGAAGGCAGGCCGGCGTGGCCTGTGTGGCACAGTACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS CAA 90 bp CTGTCATCCTCAACTATCACCATCTCCACAGAGATGCCCTCGGCCTaGGCCTGCTCCATGGCAAGTCCAAAGTTGAGCCGATCCCCAGTG +
Preference number: 6 (lower is better)
Translates to: LSSSTITISTEMPSA*ACSMASPKLSRSPV
Trigger: CACTGGGGATCGGCTCAACTTTGGACTTGCCATGGAGCAGGCCAAGGCCGAGGGCATCTCTGTGGAGATGGTGATAGTTGAGGATGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS CAA 72 bp CAGGATGACAAGCTCACCCCTAGGGTACCCATGGTCTaGGCGATCACGCTCACCCTCTTTGTGATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: QDDKLTPRVPMV*AITLTLFVISS
Trigger: GGAGGAGATCACAAAGAGGGTGAGCGTGATCGCCAAGACCATGGGTACCCTAGGGGTGAGCTTGTCATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037678.7
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS CAA 90 bp TTGTGGATAAGTACTGTGCCACACAGGCCACGCCGGCCTGCCTTCTaGAGGACGGTGAAGGCACTGTCATCCTCAACTATCACCATCTCC +
Preference number: 6 (lower is better)
Translates to: LWISTVPHRPRRPAF*RTVKALSSSTITIS
Trigger: GGAGATGGTGATAGTTGAGGATGACAGTGCCTTCACCGTCCTCAAGAAGGCAGGCCGGCGTGGCCTGTGTGGCACAGTACTTATCCACAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2
CDS CAA 72 bp TCAACTATCACCATCTCCACAGAGATGCCCTCGGCCTaGGCCTGCTCCATGGCAAGTCCAAAGTTGAGCCGA +
Preference number: 6 (lower is better)
Translates to: STITISTEMPSA*ACSMASPKLSR
Trigger: TCGGCTCAACTTTGGACTTGCCATGGAGCAGGCCAAGGCCGAGGGCATCTCTGTGGAGATGGTGATAGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000037678.7
ENSMUST00000235285.2
ENSMUST00000236121.2
ENSMUST00000236478.2
ENSMUST00000236607.2
ENSMUST00000236950.2
ENSMUST00000237788.2