Pregenerated sensors for TK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035824Ensembl transcript IDs: ENSMUST00000050211.7, ENSMUST00000211995.2, ENSMUST00000212209.2, ENSMUST00000212275.2, ENSMUST00000212854.2
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGGAGCAAGGGGACACTGCTCCTCACACAAGGACAGGAGAGAGTaGTGGGGTCTTGGAAGCTCAGCTGGCTGCCCTTGGCCTCGCTCA | + |
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Preference number: 1 (lower is better) Translates to: PGARGHCSSHKDRRE*WGLGSSAGCPWPRS Trigger: TGAGCGAGGCCAAGGGCAGCCAGCTGAGCTTCCAAGACCCCATCACTCTCTCCTGTCCTTGTGTGAGGAGCAGTGTCCCCTTGCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR GCA 90 bp | TGGAATTCACAAACTGTCCACTCTTCTCACAGAGGCGGGGGCTGGTaGTCAGAGCAGCAGGGCGGTGGGGAACAGCTTAGGAGGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: WNSQTVHSSHRGGGW*SEQQGGGEQLRRRQ Trigger: CTGCCTCCTCCTAAGCTGTTCCCCACCGCCCTGCTGCTCTGAGCACCAGCCCCCGCCTCTGTGAGAAGAGTGGACAGTTTGTGAATTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR TCA 90 bp | ACCAGGTATCTGAATGGTCCCAGCTCCCTCCACAATGCTCTGGCTTaGCGAGTCCCCACACCTCTCTGGGCTTCAAATCCTTGCCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: TRYLNGPSSLHNALA*RVPTPLWASNPCLG Trigger: CCCCAGGCAAGGATTTGAAGCCCAGAGAGGTGTGGGGACTCGTCAAGCCAGAGCATTGTGGAGGGAGCTGGGACCATTCAGATACCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR TCA 90 bp | AAGAGAAAGATCCGCACTGCCAGCAAGAGGAGAAAGTCGCAAGCCTaGACCCGCCCCCTAGGTCCGCAGACACCTGCATCCACTAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: KRKIRTASKRRKSQA*TRPLGPQTPASTKS Trigger: GCTCTTAGTGGATGCAGGTGTCTGCGGACCTAGGGGGCGGGTTCAGGCTTGCGACTTTCTCCTCTTGCTGGCAGTGCGGATCTTTCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212854.2 |
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| 3UTR TCA 90 bp | GGGCTTCAAATCCTTGCCTGGGGTGGAAGACTGCTCCCTCACCCATaGGGTGACCTGATGCAGAGGATCCAGAACAACCCCAGGGATACA | + |
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Preference number: 1 (lower is better) Translates to: GLQILAWGGRLLPHP*GDLMQRIQNNPRDT Trigger: TGTATCCCTGGGGTTGTTCTGGATCCTCTGCATCAGGTCACCTCATGGGTGAGGGAGCAGTCTTCCACCCCAGGCAAGGATTTGAAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR CCA 90 bp | AGCTGCACGTACGTCTGCAGTGTGAGGCCCCATCGGCTGGCATCATaGTACATGAGGCTCAGAGGGTTATGGCCATGGACATTTCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: SCTYVCSVRPHRLAS*YMRLRGLWPWTFLH Trigger: GTGGAGAAATGTCCATGGCCATAACCCTCTGAGCCTCATGTACCATGATGCCAGCCGATGGGGCCTCACACTGCAGACGTACGTGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212209.2 |
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| 3UTR TCA 90 bp | TCAAATCCTTGCCTGGGGTGGAAGACTGCTCCCTCACCCATGAGGTaGCCTGATGCAGAGGATCCAGAACAACCCCAGGGATACAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: SNPCLGWKTAPSPMR*PDAEDPEQPQGYSQ Trigger: CTGACTGTATCCCTGGGGTTGTTCTGGATCCTCTGCATCAGGTCACCTCATGGGTGAGGGAGCAGTCTTCCACCCCAGGCAAGGATTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR GCA 90 bp | CCCTCATACCAGGACACCCTGGGCTCATGCCAAATAAGAGAGGTGTaGCAACACCTAGTGATGTCTGGTCTCCTTGAACTGGCCCGGTAC | + |
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Preference number: 1 (lower is better) Translates to: PSYQDTLGSCQIREV*QHLVMSGLLELARY Trigger: GTACCGGGCCAGTTCAAGGAGACCAGACATCACTAGGTGTTGGCACACCTCTCTTATTTGGCATGAGCCCAGGGTGTCCTGGTATGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR GCA 90 bp | AAGCTATGTCACCTGGCTTCCATTTCCGAAGAGAAAGATCCGCACTaGCAGCAAGAGGAGAAAGTCGCAAGCCTGAACCCGCCCCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: KLCHLASISEEKDPH*QQEEKVASLNPPPR Trigger: CCTAGGGGGCGGGTTCAGGCTTGCGACTTTCTCCTCTTGCTGGCAGTGCGGATCTTTCTCTTCGGAAATGGAAGCCAGGTGACATAGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212854.2 |
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| 3UTR CCA 90 bp | AGGCCCCATCGGCTGGCATCATGGTACATGAGGCTCAGAGGGTTATaGCCATGGACATTTCTCCACTTGAGCACAGGCTCCATTAACACC | + |
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Preference number: 1 (lower is better) Translates to: RPHRLASWYMRLRGL*PWTFLHLSTGSINT Trigger: GGTGTTAATGGAGCCTGTGCTCAAGTGGAGAAATGTCCATGGCCATAACCCTCTGAGCCTCATGTACCATGATGCCAGCCGATGGGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212209.2 |
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| 3UTR CCA 90 bp | CATCGGCTGGCATCATGGTACATGAGGCTCAGAGGGTTATGGCCATaGACATTTCTCCACTTGAGCACAGGCTCCATTAACACCTCGACG | + |
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Preference number: 1 (lower is better) Translates to: HRLASWYMRLRGLWP*TFLHLSTGSINTST Trigger: CGTCGAGGTGTTAATGGAGCCTGTGCTCAAGTGGAGAAATGTCCATGGCCATAACCCTCTGAGCCTCATGTACCATGATGCCAGCCGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212209.2 ENSMUST00000212854.2 |
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| 3UTR GCA 90 bp | GAGTACTGCTGGTTCAAAGTTCCTGCCTTTCTCAGGTTTATCCATTaGTGGACTGCAGGTGCTGATGGACAATCTCCCTGGATGCTACTC | + |
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Preference number: 1 (lower is better) Translates to: EYCWFKVPAFLRFIH*WTAGADGQSPWMLL Trigger: GAGTAGCATCCAGGGAGATTGTCCATCAGCACCTGCAGTCCAGCAATGGATAAACCTGAGAAAGGCAGGAACTTTGAACCAGCAGTACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
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| 3UTR TCA 90 bp | TGCCAACACCTAGTGATGTCTGGTCTCCTTGAACTGGCCCGGTACTaGAAGATGATGGAATTCACAAACTGTCCACTCTTCTCACAGAGG | + |
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Preference number: 1 (lower is better) Translates to: CQHLVMSGLLELARY*KMMEFTNCPLFSQR Trigger: CCTCTGTGAGAAGAGTGGACAGTTTGTGAATTCCATCATCTTTCAGTACCGGGCCAGTTCAAGGAGACCAGACATCACTAGGTGTTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR CCA 90 bp | TACTGCTGGTTCAAAGTTCCTGCCTTTCTCAGGTTTATCCATTGCTaGACTGCAGGTGCTGATGGACAATCTCCCTGGATGCTACTCTTC | + |
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Preference number: 1 (lower is better) Translates to: YCWFKVPAFLRFIHC*TAGADGQSPWMLLF Trigger: GAAGAGTAGCATCCAGGGAGATTGTCCATCAGCACCTGCAGTCCAGCAATGGATAAACCTGAGAAAGGCAGGAACTTTGAACCAGCAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
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| 3UTR TCA 90 bp | CCAAATAAGAGAGGTGTGCCAACACCTAGTGATGTCTGGTCTCCTTaGACTGGCCCGGTACTGAAAGATGATGGAATTCACAAACTGTCC | + |
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Preference number: 1 (lower is better) Translates to: PNKRGVPTPSDVWSP*TGPVLKDDGIHKLS Trigger: GGACAGTTTGTGAATTCCATCATCTTTCAGTACCGGGCCAGTTCAAGGAGACCAGACATCACTAGGTGTTGGCACACCTCTCTTATTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR CCA 90 bp | ATCTCCCTGGATGCTACTCTTCATACTACCAAAAGGGCCAAGAATTaGTCCAAACAGAAAGGACCAAGAGCTGGACTCTTGGCCCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: ISLDATLHTTKRAKN*SKQKGPRAGLLALF Trigger: AAAGAGGGCCAAGAGTCCAGCTCTTGGTCCTTTCTGTTTGGACCAATTCTTGGCCCTTTTGGTAGTATGAAGAGTAGCATCCAGGGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
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| 3UTR GCA 90 bp | TTATCCATTGCTGGACTGCAGGTGCTGATGGACAATCTCCCTGGATaGTACTCTTCATACTACCAAAAGGGCCAAGAATTGGTCCAAACA | + |
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Preference number: 1 (lower is better) Translates to: LSIAGLQVLMDNLPG*YSSYYQKGQELVQT Trigger: TGTTTGGACCAATTCTTGGCCCTTTTGGTAGTATGAAGAGTAGCATCCAGGGAGATTGTCCATCAGCACCTGCAGTCCAGCAATGGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
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| 3UTR CCA 90 bp | TCCATTCTAGAATGTCAAGAGCAGCAAGGCTTAAATTGTCTTTGTTaGCAAACCATGACTTTCCAGTCTCACGGTCCTGAGGAATGGCCG | + |
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Preference number: 1 (lower is better) Translates to: SILECQEQQGLNCLC*QTMTFQSHGPEEWP Trigger: CGGCCATTCCTCAGGACCGTGAGACTGGAAAGTCATGGTTTGCCAACAAAGACAATTTAAGCCTTGCTGCTCTTGACATTCTAGAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
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| 3UTR TCA 90 bp | TGGTTCGCAGATAAACTATCAGATCAACAGAGACATCAATGTTCCTaGCGATCCAGTCAAACCACTCAGACAGAATCGCGTAGTCAACCT | + |
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Preference number: 1 (lower is better) Translates to: WFADKLSDQQRHQCS*RSSQTTQTESRSQP Trigger: AGGTTGACTACGCGATTCTGTCTGAGTGGTTTGACTGGATCGTCAGGAACATTGATGTCTCTGTTGATCTGATAGTTTATCTGCGAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212209.2 |
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| 3UTR CCA 90 bp | GCTAAGGTATTTTCTGATCCAATAGAGATGACTTCTTCATGCTCGTaGTCCATGACATCTGCTCAGATGGAAAAACACTTCAAAGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: AKVFSDPIEMTSSCS*SMTSAQMEKHFKGV Trigger: AACTCCTTTGAAGTGTTTTTCCATCTGAGCAGATGTCATGGACCACGAGCATGAAGAAGTCATCTCTATTGGATCAGAAAATACCTTAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR GCA 90 bp | AGCAAAGCTAAGGTATTTTCTGATCCAATAGAGATGACTTCTTCATaGTCGTGGTCCATGACATCTGCTCAGATGGAAAAACACTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: SKAKVFSDPIEMTSS*SWSMTSAQMEKHFK Trigger: TTTGAAGTGTTTTTCCATCTGAGCAGATGTCATGGACCACGAGCATGAAGAAGTCATCTCTATTGGATCAGAAAATACCTTAGCTTTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGAAGCTCAGCTGGCTGCCCTTGGCCTCGCTCAGCAAAGGGTAAAGTGTCCAGAGGCGGGGGCTGGTaGTCAGAGCAGCAGGGCGGT | + |
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Preference number: 2 (lower is better) Translates to: LGSSAGCPWPRSAKGKVSRGGGW*SEQQGG Trigger: ACCGCCCTGCTGCTCTGAGCACCAGCCCCCGCCTCT...GGACACTTTACCCTTTGCTGAGCGAGGCCAAGGGCAGCCAGCTGAGCTTCCAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGAACAGCTTAGGAGGAGGCAGCCCAAACCAGGTATCTGAATGGTCCCAGCACAGAGGCGGGGGCTaGTGCTCAGAGCAGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: VGNSLGGGSPNQVSEWSQHRGGG*CSEQQG Trigger: GCCCTGCTGCTCTGAGCACCAGCCCCCGCCTCTGTG...CTGGGACCATTCAGATACCTGGTTTGGGCTGCCTCCTCCTAAGCTGTTCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGGACTCTGGCACCAAGCAGAGGCCGATCCAGGAGTCCCCAGTGGACACCGACCCAAACCAGGTATCTaGATGGTCCCAGCTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: QGLWHQAEADPGVPSGHRPKPGI*MVPAPS Trigger: GGAGGGAGCTGGGACCATTCAGATACCTGGTTTGGG...TCGGTGTCCACTGGGGACTCCTGGATCGGCCTCTGCTTGGTGCCAGAGTCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGAGCTGGACTCTTGGCCCTCTTTCTAGCTCCCAGGCAGCTAAACAGGGGACATGCTCGTGGTCCATaGCATCTGGCCCTGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PRAGLLALFLAPRQLNRGHARGP*HLALAG Trigger: CCCAGCCAGGGCCAGATGTCATGGACCACGAGCATG...TCCCCTGTTTAGCTGCCTGGGAGCTAGAAAGAGGGCCAAGAGTCCAGCTCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212275.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTTTATCCATTGCTGGACTGCAGGTGCTGATGGACAATCTCCCTGGATGCCACAGAGGCGGGGGCTaGTGCTCAGAGCAGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SGLSIAGLQVLMDNLPGCHRGGG*CSEQQG Trigger: GCCCTGCTGCTCTGAGCACCAGCCCCCGCCTCTGTG...GCATCCAGGGAGATTGTCCATCAGCACCTGCAGTCCAGCAATGGATAAACCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAACAGCTTAGGAGGAGGCAGCCCAAACCAGGTATCTGAATGGTCCCAGCTCCCCTCACCCATGAGGTaGCCTGATGCAGAGGATCCA | + |
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Preference number: 2 (lower is better) Translates to: GNSLGGGSPNQVSEWSQLPSPMR*PDAEDP Trigger: TGGATCCTCTGCATCAGGTCACCTCATGGGTGAGGG...GAGCTGGGACCATTCAGATACCTGGTTTGGGCTGCCTCCTCCTAAGCTGTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGTGCTGTGCTTCTCCAGGGTATACGGTCATCATTCCCCTGTATCATCTGCAGCTAACCTGGCCCTaGCTGGGCTGTTCCTGGCGC | + |
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Preference number: 2 (lower is better) Translates to: SLCCASPGYTVIIPLYHLQLTWP*LGCSWR Trigger: GCGCCAGGAACAGCCCAGCCAGGGCCAGGTTAGCTG...CAGATGATACAGGGGAATGATGACCGTATACCCTGGAGAAGCACAGCACAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGGCAGCCCAAACCAGGTATCTGAATGGTCCCAGCTCCCTCCACAATGCTAATCCTTGCCTGGGGTaGAAGACTGCTCCCTCACCC | + |
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Preference number: 2 (lower is better) Translates to: EEAAQTRYLNGPSSLHNANPCLG*KTAPSP Trigger: GGGTGAGGGAGCAGTCTTCCACCCCAGGCAAGGATT...AGCATTGTGGAGGGAGCTGGGACCATTCAGATACCTGGTTTGGGCTGCCTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR CCA 90 bp | GGACCAAGAGCTGGACTCTTGGCCCTCTTTCTAGCTCCCAGGCAGCTAAACAGGCACTGTCACTCTCCCTaGAGCAAGGGGACACTGCTC | + |
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Preference number: 2 (lower is better) Translates to: GPRAGLLALFLAPRQLNRHCHSP*SKGTLL Trigger: GAGCAGTGTCCCCTTGCTCCAGGGAGAGTGACAGTG...CCTGTTTAGCTGCCTGGGAGCTAGAAAGAGGGCCAAGAGTCCAGCTCTTGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCAAACAGAAAGGACCAAGAGCTGGACTCTTGGCCCTCTTTCTAGCTCCCAGACATCTGGCCCTGGCTaGGCTGTTCCTGGCGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: VQTERTKSWTLGPLSSSQTSGPG*AVPGAV Trigger: GACAGCGCCAGGAACAGCCCAGCCAGGGCCAGATGT...CTGGGAGCTAGAAAGAGGGCCAAGAGTCCAGCTCTTGGTCCTTTCTGTTTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212275.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTTCCTGCCTTTCTCAGGTTTATCCATTGCTGGACTGCAGGTGCTGATGGACAGCTAACCTGGCCCTaGCTGGGCTGTTCCTGGCGC | + |
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Preference number: 2 (lower is better) Translates to: KVPAFLRFIHCWTAGADGQLTWP*LGCSWR Trigger: GCGCCAGGAACAGCCCAGCCAGGGCCAGGTTAGCTG...TCCATCAGCACCTGCAGTCCAGCAATGGATAAACCTGAGAAAGGCAGGAACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGAGCTGGACTCTTGGCCCTCTTTCTAGCTCCCAGGCAGCTAAACAGGGGACTTCAAATCCTTGCCTaGGGTGGAAGACTGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: PRAGLLALFLAPRQLNRGLQILA*GGRLLP Trigger: AGGGAGCAGTCTTCCACCCCAGGCAAGGATTTGAAG...TCCCCTGTTTAGCTGCCTGGGAGCTAGAAAGAGGGCCAAGAGTCCAGCTCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGTGCTGTGCTTCTCCAGGGTATACGGTCATCATTCCCCTGTATCATCTGCCCAAACCAGGTATCTaGATGGTCCCAGCTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SLCCASPGYTVIIPLYHLPKPGI*MVPAPS Trigger: GGAGGGAGCTGGGACCATTCAGATACCTGGTTTGGG...CAGATGATACAGGGGAATGATGACCGTATACCCTGGAGAAGCACAGCACAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTTTCTCAGGTTTATCCATTGCTGGACTGCAGGTGCTGATGGACAATCTCGTGGTCCATGACATCTaGCCCTGGCTGGGCTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: LPFSGLSIAGLQVLMDNLVVHDI*PWLGCS Trigger: GGAACAGCCCAGCCAGGGCCAGATGTCATGGACCAC...GAGATTGTCCATCAGCACCTGCAGTCCAGCAATGGATAAACCTGAGAAAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212275.2 |
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| 3UTR-3UTR GCA 90 bp | CCTAGGGTCCATGCTTCCAGTTCTCTGGAGTTAATATCCGGGCCCGGTTTTGTTTCCAGCATGGTGAGCTaGACGTACGTCTGCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: PRVHASSSLELISGPGFVSSMVS*TYVCSV Trigger: CACACTGCAGACGTACGTGCAGCTCACCATGCTGGA...AACAAAACCGGGCCCGGATATTAACTCCAGAGAACTGGAAGCATGGACCCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212209.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGTGCTGTGCTTCTCCAGGGTATACGGTCATCATTCCCCTGTATCATCTGGTCCCCACACCTCTCTaGGCTTCAAATCCTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SLCCASPGYTVIIPLYHLVPTPL*ASNPCL Trigger: CAGGCAAGGATTTGAAGCCCAGAGAGGTGTGGGGAC...CAGATGATACAGGGGAATGATGACCGTATACCCTGGAGAAGCACAGCACAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGCAGCAGCCCGAGGCCAATGAAAGCTATGTCACCTGGCTTCCATTTCCGCGACGTCTGTTGTATTaGAGAAGAACTCCAGGCATG | + |
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Preference number: 2 (lower is better) Translates to: WQQQPEANESYVTWLPFPRRLLY*RRTPGM Trigger: CATGCCTGGAGTTCTTCTCCAATACAACAGACGTCG...CGGAAATGGAAGCCAGGTGACATAGCTTTCATTGGCCTCGGGCTGCTGCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212854.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATTCAAGTAACAGCTGCACCTTCAGTGCACAGTTACGGCTCAGCAAAGCTACCCTCACCCATGAGGTaGCCTGATGCAGAGGATCCA | + |
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Preference number: 2 (lower is better) Translates to: LIQVTAAPSVHSYGSAKLPSPMR*PDAEDP Trigger: TGGATCCTCTGCATCAGGTCACCTCATGGGTGAGGG...TAGCTTTGCTGAGCCGTAACTGTGCACTGAAGGTGCAGCTGTTACTTGAATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTTAAGGCCACTGTCACTCTCCCTGGAGCAAGGGGACACTGCTCCTCACACACCCGGTACTGAAAGATaGTGGAATTCACAAACTGTC | + |
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Preference number: 2 (lower is better) Translates to: ELRPLSLSLEQGDTAPHTPGTER*WNSQTV Trigger: GACAGTTTGTGAATTCCATCATCTTTCAGTACCGGG...TGTGTGAGGAGCAGTGTCCCCTTGCTCCAGGGAGAGTGACAGTGGCCTTAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGAAGCTCAGCTGGCTGCCCTTGGCCTCGCTCAGCAAAGGGTAAAGTGTCCCAAATAAGAGAGGTGTaGCAACACCTAGTGATGTCT | + |
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Preference number: 2 (lower is better) Translates to: LGSSAGCPWPRSAKGKVSQIREV*QHLVMS Trigger: AGACATCACTAGGTGTTGGCACACCTCTCTTATTTG...GGACACTTTACCCTTTGCTGAGCGAGGCCAAGGGCAGCCAGCTGAGCTTCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATCTGGCAGCAGCAGCCCGAGGCCAATGAAAGCTATGTCACCTGGCTTCCAGAGAAAGATCCGCACTaGCAGCAAGAGGAGAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: FIWQQQPEANESYVTWLPEKDPH*QQEEKV Trigger: GACTTTCTCCTCTTGCTGGCAGTGCGGATCTTTCTC...TGGAAGCCAGGTGACATAGCTTTCATTGGCCTCGGGCTGCTGCTGCCAGATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212854.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCGACGTCTGTTGTATTGGAGAAGAACTCCAGGCATGTCGTCTTCCCACTTGTTCTCTATCTTTATCTaGCAGCAGCAGCCCGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PRRLLYWRRTPGMSSSHLFSIFI*QQQPEA Trigger: GGCCTCGGGCTGCTGCTGCCAGATAAAGATAGAGAA...CAAGTGGGAAGACGACATGCCTGGAGTTCTTCTCCAATACAACAGACGTCGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212854.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCAAACAGAAAGGACCAAGAGCTGGACTCTTGGCCCTCTTTCTAGCTCCCAGTTTGTTGGCAAACCATaGCTTTCCAGTCTCACGGTC | + |
|
Preference number: 2 (lower is better) Translates to: VQTERTKSWTLGPLSSSQFVGKP*LSSLTV Trigger: GACCGTGAGACTGGAAAGTCATGGTTTGCCAACAAA...CTGGGAGCTAGAAAGAGGGCCAAGAGTCCAGCTCTTGGTCCTTTCTGTTTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| 3UTR-3UTR GCA 90 bp | GAATTGGTCCAAACAGAAAGGACCAAGAGCTGGACTCTTGGCCCTCTTTCTAGCGACACCCTGGGCTCATaGCAAATAAGAGAGGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: ELVQTERTKSWTLGPLSSDTLGS*QIREVC Trigger: GCACACCTCTCTTATTTGGCATGAGCCCAGGGTGTC...GCTAGAAAGAGGGCCAAGAGTCCAGCTCTTGGTCCTTTCTGTTTGGACCAATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR-3UTR CCA 90 bp | TATACGGTCATCATTCCCCTGTATCATCTGTGTCCAGTCTTTTCCAGATGCACTAACAGGGGCTGCAGCTaGGAAGAGGCTCCCGTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: YTVIIPLYHLCPVFSRCTNRGCS*EEAPVD Trigger: GTCAACGGGAGCCTCTTCCCAGCTGCAGCCCCTGTT...AGTGCATCTGGAAAAGACTGGACACAGATGATACAGGGGAATGATGACCGTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211995.2 |
||
| 3UTR CAA 90 bp | TGGTACATGAGGCTCAGAGGGTTATGGCCATGGACATTTCTCCACTaGAGCACAGGCTCCATTAACACCTCGACGTCTGTTGTATTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: WYMRLRGLWPWTFLH*STGSINTSTSVVLE Trigger: CTCCAATACAACAGACGTCGAGGTGTTAATGGAGCCTGTGCTCAAGTGGAGAAATGTCCATGGCCATAACCCTCTGAGCCTCATGTACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212209.2 ENSMUST00000212854.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTTCCTGCCTTTCTCAGGTTTATCCATTGCTGGACTGCAGGTGCTGATGGACTTCAAATCCTTGCCTaGGGTGGAAGACTGCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: KVPAFLRFIHCWTAGADGLQILA*GGRLLP Trigger: AGGGAGCAGTCTTCCACCCCAGGCAAGGATTTGAAG...TCCATCAGCACCTGCAGTCCAGCAATGGATAAACCTGAGAAAGGCAGGAACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCGACGTCTGTTGTATTGGAGAAGAACTCCAGGCATGTCGTCTTCCCACTTGCGACGTCTGTTGTATTaGAGAAGAACTCCAGGCATG | + |
|
Preference number: 2 (lower is better) Translates to: PRRLLYWRRTPGMSSSHLRRLLY*RRTPGM Trigger: CATGCCTGGAGTTCTTCTCCAATACAACAGACGTCG...CAAGTGGGAAGACGACATGCCTGGAGTTCTTCTCCAATACAACAGACGTCGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212209.2 ENSMUST00000212854.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTAGGGTCCATGCTTCCAGTTCTCTGGAGTTAATATCCGGGCCCGGTTTTGTTAGAGGGTTATGGCCATaGACATTTCTCCACTTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PRVHASSSLELISGPGFVRGLWP*TFLHLS Trigger: GCTCAAGTGGAGAAATGTCCATGGCCATAACCCTCT...AACAAAACCGGGCCCGGATATTAACTCCAGAGAACTGGAAGCATGGACCCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212209.2 |
||
| 3UTR CAA 90 bp | CTCCACTTGAGCACAGGCTCCATTAACACCTCGACGTCTGTTGTATaGGAGAAGAACTCCAGGCATGTCGTCTTCCCACTTGCAATATTG | + |
|
Preference number: 2 (lower is better) Translates to: LHLSTGSINTSTSVV*EKNSRHVVFPLAIL Trigger: CAATATTGCAAGTGGGAAGACGACATGCCTGGAGTTCTTCTCCAATACAACAGACGTCGAGGTGTTAATGGAGCCTGTGCTCAAGTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212209.2 ENSMUST00000212854.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTCCATTAACACCTCGACGTCTGTTGTATTGGAGAAGAACTCCAGGCATGGGACATTTCTCCACTTaGGCACAGGCTCCATTAACA | + |
|
Preference number: 2 (lower is better) Translates to: QAPLTPRRLLYWRRTPGMGHFST*AQAPLT Trigger: TGTTAATGGAGCCTGTGCTCAAGTGGAGAAATGTCC...CATGCCTGGAGTTCTTCTCCAATACAACAGACGTCGAGGTGTTAATGGAGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212209.2 ENSMUST00000212854.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGTTAAGGCCACTGTCACTCTCCCTGGAGCAAGGGGACACTGCTCCTCACACAAAAAGCCATTTGTACTaGAGTGAAAAGACCATTGAG | + |
|
Preference number: 2 (lower is better) Translates to: ELRPLSLSLEQGDTAPHTKSHLY*SEKTIE Trigger: CTCAATGGTCTTTTCACTGCAGTACAAATGGCTTTT...TGTGTGAGGAGCAGTGTCCCCTTGCTCCAGGGAGAGTGACAGTGGCCTTAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGAGTACTGCTGGTTCAAAGTTCCTGCCTTTCTCAGGTTTATCCATTGCTGGAGTCCCCACACCTCTCTaGGCTTCAAATCCTTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: MSTAGSKFLPFSGLSIAGVPTPL*ASNPCL Trigger: CAGGCAAGGATTTGAAGCCCAGAGAGGTGTGGGGAC...TCCAGCAATGGATAAACCTGAGAAAGGCAGGAACTTTGAACCAGCAGTACTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGTACTGCTGGTTCAAAGTTCCTGCCTTTCTCAGGTTTATCCATTGCTGGACTGGAACTGGTAGAGTCTaGGGAGGACTCATCCTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: EYCWFKVPAFLRFIHCWTGTGRV*GGLILK Trigger: CTTGAGGATGAGTCCTCCCCAGACTCTACCAGTTCC...AGTCCAGCAATGGATAAACCTGAGAAAGGCAGGAACTTTGAACCAGCAGTACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCTCCATTAACACCTCGACGTCTGTTGTATTGGAGAAGAACTCCAGGCATGAGAGGGTTATGGCCATaGACATTTCTCCACTTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: QAPLTPRRLLYWRRTPGMRGLWP*TFLHLS Trigger: GCTCAAGTGGAGAAATGTCCATGGCCATAACCCTCT...CATGCCTGGAGTTCTTCTCCAATACAACAGACGTCGAGGTGTTAATGGAGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212209.2 ENSMUST00000212854.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTCCATTAACACCTCGACGTCTGTTGTATTGGAGAAGAACTCCAGGCATGAGACATCAATGTTCCTaGCGATCCAGTCAAACCACT | + |
|
Preference number: 2 (lower is better) Translates to: QAPLTPRRLLYWRRTPGMRHQCS*RSSQTT Trigger: AGTGGTTTGACTGGATCGTCAGGAACATTGATGTCT...CATGCCTGGAGTTCTTCTCCAATACAACAGACGTCGAGGTGTTAATGGAGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212209.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCCATGCTTCCAGTTCTCTGGAGTTAATATCCGGGCCCGGTTTTGTTCAAAGAGGACATTTCTCCACTTaGGCACAGGCTCCATTAACA | + |
|
Preference number: 2 (lower is better) Translates to: VHASSSLELISGPGFVQRGHFST*AQAPLT Trigger: TGTTAATGGAGCCTGTGCTCAAGTGGAGAAATGTCC...TCTTTGAACAAAACCGGGCCCGGATATTAACTCCAGAGAACTGGAAGCATGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212209.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGAGTACTGCTGGTTCAAAGTTCCTGCCTTTCTCAGGTTTATCCATTGCTGGATGGGCTTCAAATCCTTaGCTGGGGTGGAAGACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: MSTAGSKFLPFSGLSIAGWASNP*LGWKTA Trigger: AGCAGTCTTCCACCCCAGGCAAGGATTTGAAGCCCA...TCCAGCAATGGATAAACCTGAGAAAGGCAGGAACTTTGAACCAGCAGTACTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR-3UTR GCA 90 bp | TATACGGTCATCATTCCCCTGTATCATCTGTGTCCAGTCTTTTCCAGATGCACTTGGGCTTCAAATCCTTaGCTGGGGTGGAAGACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: YTVIIPLYHLCPVFSRCTWASNP*LGWKTA Trigger: AGCAGTCTTCCACCCCAGGCAAGGATTTGAAGCCCA...AGTGCATCTGGAAAAGACTGGACACAGATGATACAGGGGAATGATGACCGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR-3UTR CCA 90 bp | GTAACAGCTGCACCTTCAGTGCACAGTTACGGCTCAGCAAAGCTAAGGTATTTTCAGGTGACAAAGGAATaGATAGAGGTCACAGTACCC | + |
|
Preference number: 2 (lower is better) Translates to: VTAAPSVHSYGSAKLRYFQVTKE*IEVTVP Trigger: GGGTACTGTGACCTCTATCCATTCCTTTGTCACCTG...AAAATACCTTAGCTTTGCTGAGCCGTAACTGTGCACTGAAGGTGCAGCTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTGTGTCCAGTCTTTTCCAGATGCACTCCATCCATTCTAGAATGTCAAGAGCATTTGTTGGCAAACCATaGCTTTCCAGTCTCACGGTC | + |
|
Preference number: 2 (lower is better) Translates to: SVSSLFQMHSIHSRMSRAFVGKP*LSSLTV Trigger: GACCGTGAGACTGGAAAGTCATGGTTTGCCAACAAA...TGCTCTTGACATTCTAGAATGGATGGAGTGCATCTGGAAAAGACTGGACACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAGCTGCACCTTCAGTGCACAGTTACGGCTCAGCAAAGCTAAGGTATTTTCTGAGATGACTTCTTCATaGTCGTGGTCCATGACATCT | + |
|
Preference number: 2 (lower is better) Translates to: NSCTFSAQLRLSKAKVFSEMTSS*SWSMTS Trigger: AGATGTCATGGACCACGAGCATGAAGAAGTCATCTC...AGAAAATACCTTAGCTTTGCTGAGCCGTAACTGTGCACTGAAGGTGCAGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| 3UTR-3UTR GCA 90 bp | GTATACGGTCATCATTCCCCTGTATCATCTGTGTCCAGTCTTTTCCAGATGCACGAGATGACTTCTTCATaGTCGTGGTCCATGACATCT | + |
|
Preference number: 2 (lower is better) Translates to: VYGHHSPVSSVSSLFQMHEMTSS*SWSMTS Trigger: AGATGTCATGGACCACGAGCATGAAGAAGTCATCTC...GTGCATCTGGAAAAGACTGGACACAGATGATACAGGGGAATGATGACCGTATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCATGGTACATGAGGCTCAGAGGGTTATGGCCATGGACATTTCTCCACTTGAGTGTCGTCTTCCCACTTaGAATATTGCCCTCAATACA | + |
|
Preference number: 2 (lower is better) Translates to: IMVHEAQRVMAMDISPLECRLPT*NIALNT Trigger: TGTATTGAGGGCAATATTGCAAGTGGGAAGACGACA...CTCAAGTGGAGAAATGTCCATGGCCATAACCCTCTGAGCCTCATGTACCATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212854.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAGCTGCACCTTCAGTGCACAGTTACGGCTCAGCAAAGCTAAGGTATTTTCTGTGGTCCATGACATCTaGTCAGATGGAAAAACACTT | + |
|
Preference number: 2 (lower is better) Translates to: NSCTFSAQLRLSKAKVFSVVHDI*SDGKTL Trigger: AAGTGTTTTTCCATCTGAGCAGATGTCATGGACCAC...AGAAAATACCTTAGCTTTGCTGAGCCGTAACTGTGCACTGAAGGTGCAGCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCCAGTTCTCTGGAGTTAATATCCGGGCCCGGTTTTGTTCAAAGAGTTCTAATTTTCTCCAAGTTGTaGTCAGCCTCAATCACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ASSSLELISGPGFVQRVLIFSKL*SASITR Trigger: TCTGGTGATTGAGGCTGACCACAACTTGGAGAAAAT...TAGAACTCTTTGAACAAAACCGGGCCCGGATATTAACTCCAGAGAACTGGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211995.2 ENSMUST00000212209.2 |
||
| 3UTR-3UTR TCA 90 bp | TATCATCTGTGTCCAGTCTTTTCCAGATGCACTCCATCCATTCTAGAATGTCAAAGACATCAATGTTCCTaGCGATCCAGTCAAACCACT | + |
|
Preference number: 2 (lower is better) Translates to: YHLCPVFSRCTPSILECQRHQCS*RSSQTT Trigger: AGTGGTTTGACTGGATCGTCAGGAACATTGATGTCT...TTGACATTCTAGAATGGATGGAGTGCATCTGGAAAAGACTGGACACAGATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211995.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTACTGCTGGTTCAAAGTTCCTGCCTTTCTCAGGTTTATCCATTGCTGGACTAAAAGCCATTTGTACTaGAGTGAAAAGACCATTGAG | + |
|
Preference number: 2 (lower is better) Translates to: EYCWFKVPAFLRFIHCWTKSHLY*SEKTIE Trigger: CTCAATGGTCTTTTCACTGCAGTACAAATGGCTTTT...AGTCCAGCAATGGATAAACCTGAGAAAGGCAGGAACTTTGAACCAGCAGTACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTGGAGTTAATATCCGGGCCCGGTTTTGTTCAAAGAGTTCTAACATTTTCATTTTCTCCAAGTTGTaGTCAGCCTCAATCACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: FSGVNIRARFCSKSSNIFIFSKL*SASITR Trigger: TCTGGTGATTGAGGCTGACCACAACTTGGAGAAAAT...GAAAATGTTAGAACTCTTTGAACAAAACCGGGCCCGGATATTAACTCCAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000211995.2 ENSMUST00000212209.2 |
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| 3UTR-3UTR TCA 90 bp | CAGATAAACTATCAGATCAACAGAGACATCAATGTTCCTGACGATCCAGTCAAATATGCTGCAAGCATCTaGCAGACAAAAGCCATTTGT | + |
|
Preference number: 2 (lower is better) Translates to: QINYQINRDINVPDDPVKYAASI*QTKAIC Trigger: ACAAATGGCTTTTGTCTGTCAGATGCTTGCAGCATA...TTTGACTGGATCGTCAGGAACATTGATGTCTCTGTTGATCTGATAGTTTATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211995.2 |
||
| 3UTR TCA 72 bp | ATCCGCACTGCCAGCAAGAGGAGAAAGTCGCAAGCCTaGACCCGCCCCCTAGGTCCGCAGACACCTGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: IRTASKRRKSQA*TRPLGPQTPAS Trigger: GGATGCAGGTGTCTGCGGACCTAGGGGGCGGGTTCAGGCTTGCGACTTTCTCCTCTTGCTGGCAGTGCGGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212854.2 |
||
| 3UTR TCA 72 bp | ACAGAATCGCGTAGTCAACCTCGGGCATCTTCCCACTaGGGGCGCGTGTGCTGGTCCAGCATGGTGAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TESRSQPRASSH*GRVCWSSMVSC Trigger: GCAGCTCACCATGCTGGACCAGCACACGCGCCCTCAGTGGGAAGATGCCCGAGGTTGACTACGCGATTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212209.2 |
||
| 3UTR GCA 72 bp | GTGTGCTGGTCCAGCATGGTGAGCTGCACGTACGTCTaGAGTGTGAGGCCCCATCGGCTGGCATCATGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: VCWSSMVSCTYV*SVRPHRLASWY Trigger: GTACCATGATGCCAGCCGATGGGGCCTCACACTGCAGACGTACGTGCAGCTCACCATGCTGGACCAGCACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212209.2 |
||
| 3UTR CCA 72 bp | TCACAAACTGTCCACTCTTCTCACAGAGGCGGGGGCTaGTGCTCAGAGCAGCAGGGCGGTGGGGAACAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SQTVHSSHRGGG*CSEQQGGGEQL Trigger: AAGCTGTTCCCCACCGCCCTGCTGCTCTGAGCACCAGCCCCCGCCTCTGTGAGAAGAGTGGACAGTTTGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR CCA 72 bp | CTCCTCACACAAGGACAGGAGAGAGTGATGGGGTCTTaGAAGCTCAGCTGGCTGCCCTTGGCCTCGCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LLTQGQERVMGS*KLSWLPLASLS Trigger: GCTGAGCGAGGCCAAGGGCAGCCAGCTGAGCTTCCAAGACCCCATCACTCTCTCCTGTCCTTGTGTGAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR TCA 72 bp | GGGGTGGAAGACTGCTCCCTCACCCATGAGGTGACCTaGTGCAGAGGATCCAGAACAACCCCAGGGATACAG | + |
|
Preference number: 3 (lower is better) Translates to: GVEDCSLTHEVT*CRGSRTTPGIQ Trigger: CTGTATCCCTGGGGTTGTTCTGGATCCTCTGCATCAGGTCACCTCATGGGTGAGGGAGCAGTCTTCCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR TCA 72 bp | ATCCTTGCCTGGGGTGGAAGACTGCTCCCTCACCCATaGGGTGACCTGATGCAGAGGATCCAGAACAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: ILAWGGRLLPHP*GDLMQRIQNNP Trigger: GGGGTTGTTCTGGATCCTCTGCATCAGGTCACCTCATGGGTGAGGGAGCAGTCTTCCACCCCAGGCAAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR TCA 72 bp | GAGAAGCCGCGTTTGAGCCCCACTAAGTGCCGATCCTaGCAGTTCATTAGGGTCCCACAGTCCCCAGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: EKPRLSPTKCRS*QFIRVPQSPDP Trigger: AGGGTCTGGGGACTGTGGGACCCTAATGAACTGTCAGGATCGGCACTTAGTGGGGCTCAAACGCGGCTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212854.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTGCCAGCAAGAGGAGAAAGTCGCAAGCCTGAACCCGCCCCCTAGGTCCGCAACACCTCGACGTCTGTaGTATTGGAGAAGAACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HCQQEEKVASLNPPPRSATPRRL*YWRRTP Trigger: TGGAGTTCTTCTCCAATACAACAGACGTCGAGGTGT...TGCGGACCTAGGGGGCGGGTTCAGGCTTGCGACTTTCTCCTCTTGCTGGCAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212854.2 |
||
| 3UTR CCA 72 bp | AGCTTAGGAGGAGGCAGCCCAAACCAGGTATCTGAATaGTCCCAGCTCCCTCCACAATGCTCTGGCTTGACG | + |
|
Preference number: 3 (lower is better) Translates to: SLGGGSPNQVSE*SQLPPQCSGLT Trigger: CGTCAAGCCAGAGCATTGTGGAGGGAGCTGGGACCATTCAGATACCTGGTTTGGGCTGCCTCCTCCTAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR TCA 72 bp | GAACAGCTTAGGAGGAGGCAGCCCAAACCAGGTATCTaGATGGTCCCAGCTCCCTCCACAATGCTCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: EQLRRRQPKPGI*MVPAPSTMLWL Trigger: AAGCCAGAGCATTGTGGAGGGAGCTGGGACCATTCAGATACCTGGTTTGGGCTGCCTCCTCCTAAGCTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR GCA 72 bp | CACCTGGCTTCCATTTCCGAAGAGAAAGATCCGCACTaGCAGCAAGAGGAGAAAGTCGCAAGCCTGAACCCG | + |
|
Preference number: 3 (lower is better) Translates to: HLASISEEKDPH*QQEEKVASLNP Trigger: CGGGTTCAGGCTTGCGACTTTCTCCTCTTGCTGGCAGTGCGGATCTTTCTCTTCGGAAATGGAAGCCAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212854.2 |
||
| 3UTR CCA 72 bp | AGAGATGACTTCTTCATGCTCGTGGTCCATGACATCTaGCCCTGGCTGGGCTGTTCCTGGCGCTGTCTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: RDDFFMLVVHDI*PWLGCSWRCLV Trigger: TACAAGACAGCGCCAGGAACAGCCCAGCCAGGGCCAGATGTCATGGACCACGAGCATGAAGAAGTCATCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212275.2 |
||
| 3UTR CCA 72 bp | CGGCTGGCATCATGGTACATGAGGCTCAGAGGGTTATaGCCATGGACATTTCTCCACTTGAGCACAGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RLASWYMRLRGL*PWTFLHLSTGS Trigger: GGAGCCTGTGCTCAAGTGGAGAAATGTCCATGGCCATAACCCTCTGAGCCTCATGTACCATGATGCCAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212209.2 ENSMUST00000212854.2 |
||
| 3UTR TCA 72 bp | GGCTCAGAGGGTTATGGCCATGGACATTTCTCCACTTaGGCACAGGCTCCATTAACACCTCGACGTCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSEGYGHGHFST*AQAPLTPRRLL Trigger: CAACAGACGTCGAGGTGTTAATGGAGCCTGTGCTCAAGTGGAGAAATGTCCATGGCCATAACCCTCTGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212209.2 ENSMUST00000212854.2 |
||
| 3UTR GCA 72 bp | CAGGACACCCTGGGCTCATGCCAAATAAGAGAGGTGTaGCAACACCTAGTGATGTCTGGTCTCCTTGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: QDTLGSCQIREV*QHLVMSGLLEL Trigger: CAGTTCAAGGAGACCAGACATCACTAGGTGTTGGCACACCTCTCTTATTTGGCATGAGCCCAGGGTGTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAAGTTCCTGCCTTTCTCAGGTTTATCCATTGCTGGACTGCAGGTGCTGATCCAAGAGCTGGACTCTaGGCCCTCTTTCTAGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: FKVPAFLRFIHCWTAGADPRAGL*ALFLAP Trigger: GGGAGCTAGAAAGAGGGCCAAGAGTCCAGCTCTTGG...ATCAGCACCTGCAGTCCAGCAATGGATAAACCTGAGAAAGGCAGGAACTTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| 3UTR CCA 72 bp | GCACAGGCTCCATTAACACCTCGACGTCTGTTGTATTaGAGAAGAACTCCAGGCATGTCGTCTTCCCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: AQAPLTPRRLLY*RRTPGMSSSHL Trigger: CAAGTGGGAAGACGACATGCCTGGAGTTCTTCTCCAATACAACAGACGTCGAGGTGTTAATGGAGCCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212209.2 ENSMUST00000212854.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCATCATGGTACATGAGGCTCAGAGGGTTATGGCCATGGACATTTCTCCACTCGACGTCTGTTGTATaGGAGAAGAACTCCAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LASWYMRLRGLWPWTFLHSTSVV*EKNSRH Trigger: ATGCCTGGAGTTCTTCTCCAATACAACAGACGTCGA...GTGGAGAAATGTCCATGGCCATAACCCTCTGAGCCTCATGTACCATGATGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212209.2 ENSMUST00000212854.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCGACGTCTGTTGTATTGGAGAAGAACTCCAGGCATGTCGTCTTCCCACTTGTCGACGTCTGTTGTATaGGAGAAGAACTCCAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PRRLLYWRRTPGMSSSHLSTSVV*EKNSRH Trigger: ATGCCTGGAGTTCTTCTCCAATACAACAGACGTCGA...CAAGTGGGAAGACGACATGCCTGGAGTTCTTCTCCAATACAACAGACGTCGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212209.2 ENSMUST00000212854.2 |
||
| 3UTR TCA 72 bp | AGAGGTGTGCCAACACCTAGTGATGTCTGGTCTCCTTaGACTGGCCCGGTACTGAAAGATGATGGAATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RGVPTPSDVWSP*TGPVLKDDGIH Trigger: GTGAATTCCATCATCTTTCAGTACCGGGCCAGTTCAAGGAGACCAGACATCACTAGGTGTTGGCACACCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR GCA 72 bp | GCTGGACTGCAGGTGCTGATGGACAATCTCCCTGGATaGTACTCTTCATACTACCAAAAGGGCCAAGAATTG | + |
|
Preference number: 3 (lower is better) Translates to: AGLQVLMDNLPG*YSSYYQKGQEL Trigger: CAATTCTTGGCCCTTTTGGTAGTATGAAGAGTAGCATCCAGGGAGATTGTCCATCAGCACCTGCAGTCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| 3UTR GCA 72 bp | TGGTTCAAAGTTCCTGCCTTTCTCAGGTTTATCCATTaGTGGACTGCAGGTGCTGATGGACAATCTCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WFKVPAFLRFIH*WTAGADGQSPW Trigger: CCAGGGAGATTGTCCATCAGCACCTGCAGTCCAGCAATGGATAAACCTGAGAAAGGCAGGAACTTTGAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| 3UTR CCA 72 bp | CATTGCTGGACTGCAGGTGCTGATGGACAATCTCCCTaGATGCTACTCTTCATACTACCAAAAGGGCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HCWTAGADGQSP*MLLFILPKGPR Trigger: TCTTGGCCCTTTTGGTAGTATGAAGAGTAGCATCCAGGGAGATTGTCCATCAGCACCTGCAGTCCAGCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| 3UTR CCA 72 bp | TTTTCTGATCCAATAGAGATGACTTCTTCATGCTCGTaGTCCATGACATCTGGCCCTGGCTGGGCTGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FSDPIEMTSSCS*SMTSGPGWAVP Trigger: AGGAACAGCCCAGCCAGGGCCAGATGTCATGGACCACGAGCATGAAGAAGTCATCTCTATTGGATCAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212275.2 |
||
| 3UTR CCA 72 bp | GCATCATGGTACATGAGGCTCAGAGGGTTATGGCCATaGACATTTCTCCACTTGAGCACAGGCTCCATTAAC | + |
|
Preference number: 3 (lower is better) Translates to: ASWYMRLRGLWP*TFLHLSTGSIN Trigger: GTTAATGGAGCCTGTGCTCAAGTGGAGAAATGTCCATGGCCATAACCCTCTGAGCCTCATGTACCATGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212209.2 ENSMUST00000212854.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACCAAGAGCTGGACTCTTGGCCCTCTTTCTAGCTCCCAGGCAGCTAAACAGGCTTAAATTGTCTTTGTaGGCAAACCATGACTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GPRAGLLALFLAPRQLNRLKLSL*ANHDFP Trigger: TGGAAAGTCATGGTTTGCCAACAAAGACAATTTAAG...CCTGTTTAGCTGCCTGGGAGCTAGAAAGAGGGCCAAGAGTCCAGCTCTTGGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| 3UTR GCA 72 bp | AAGGTATTTTCTGATCCAATAGAGATGACTTCTTCATaGTCGTGGTCCATGACATCTGGCCCTGGCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KVFSDPIEMTSS*SWSMTSGPGWA Trigger: AGCCCAGCCAGGGCCAGATGTCATGGACCACGAGCATGAAGAAGTCATCTCTATTGGATCAGAAAATACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212275.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACGGTCATCATTCCCCTGTATCATCTGTGTCCAGTCTTTTCCAGATGCACTCAATGGCCGGCCTCTCTaGGTCATGACTGATTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: IRSSFPCIICVQSFPDALNGRPL*VMTDSS Trigger: ACTTGAATCAGTCATGACCAAGAGAGGCCGGCCATT...GAGTGCATCTGGAAAAGACTGGACACAGATGATACAGGGGAATGATGACCGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCATGGTACATGAGGCTCAGAGGGTTATGGCCATGGACATTTCTCCACTTGAGTGGACATTTCTCCACTaGAGCACAGGCTCCATTAAC | + |
|
Preference number: 3 (lower is better) Translates to: IMVHEAQRVMAMDISPLEWTFLH*STGSIN Trigger: GTTAATGGAGCCTGTGCTCAAGTGGAGAAATGTCCA...CTCAAGTGGAGAAATGTCCATGGCCATAACCCTCTGAGCCTCATGTACCATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212209.2 ENSMUST00000212854.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTGTCCAGTCTTTTCCAGATGCACTCCATCCATTCTAGAATGTCAAGAGCAAATGGCCGGCCTCTCTaGGTCATGACTGATTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SVSSLFQMHSIHSRMSRANGRPL*VMTDSS Trigger: ACTTGAATCAGTCATGACCAAGAGAGGCCGGCCATT...TGCTCTTGACATTCTAGAATGGATGGAGTGCATCTGGAAAAGACTGGACACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| 3UTR TCA 72 bp | CTAGTGATGTCTGGTCTCCTTGAACTGGCCCGGTACTaGAAGATGATGGAATTCACAAACTGTCCACTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LVMSGLLELARY*KMMEFTNCPLF Trigger: GAAGAGTGGACAGTTTGTGAATTCCATCATCTTTCAGTACCGGGCCAGTTCAAGGAGACCAGACATCACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGTATACGGTCATCATTCCCCTGTATCATCTGTGTCCAGTCTTTTCCAGAACAGACAAAAGCCATTaGTACTGCAGTGAAAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: PGYTVIIPLYHLCPVFSRTDKSH*YCSEKT Trigger: GGTCTTTTCACTGCAGTACAAATGGCTTTTGTCTGT...TCTGGAAAAGACTGGACACAGATGATACAGGGGAATGATGACCGTATACCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR CCA 72 bp | GATGCTACTCTTCATACTACCAAAAGGGCCAAGAATTaGTCCAAACAGAAAGGACCAAGAGCTGGACTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: DATLHTTKRAKN*SKQKGPRAGLL Trigger: CAAGAGTCCAGCTCTTGGTCCTTTCTGTTTGGACCAATTCTTGGCCCTTTTGGTAGTATGAAGAGTAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACTACCAAAAGGGCCAAGAATTGGTCCAAACAGAAAGGACCAAGAGCTGGACACAGACAAAAGCCATTaGTACTGCAGTGAAAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: ILPKGPRIGPNRKDQELDTDKSH*YCSEKT Trigger: GGTCTTTTCACTGCAGTACAAATGGCTTTTGTCTGT...GTCCAGCTCTTGGTCCTTTCTGTTTGGACCAATTCTTGGCCCTTTTGGTAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTGGTCCAAACAGAAAGGACCAAGAGCTGGACTCTTGGCCCTCTTTCTAGCTAGCTGTAGAATTTTATaGGCTACTAGAGAGAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NWSKQKGPRAGLLALFLASCRIL*ATREKE Trigger: CTCTTTCTCTCTAGTAGCCAATAAAATTCTACAGCT...AGCTAGAAAGAGGGCCAAGAGTCCAGCTCTTGGTCCTTTCTGTTTGGACCAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| 3UTR TCA 72 bp | GATAAACTATCAGATCAACAGAGACATCAATGTTCCTaGCGATCCAGTCAAACCACTCAGACAGAATCGCGT | + |
|
Preference number: 3 (lower is better) Translates to: DKLSDQQRHQCS*RSSQTTQTESR Trigger: ACGCGATTCTGTCTGAGTGGTTTGACTGGATCGTCAGGAACATTGATGTCTCTGTTGATCTGATAGTTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211995.2 ENSMUST00000212209.2 |
||
| 3UTR CCA 72 bp | ACCTCATCTTTAATCTCTGGTAGCAGATTTCGGGAGTaGTTCGCAGATAAACTATCAGATCAACAGAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: TSSLISGSRFRE*FADKLSDQQRH Trigger: ATGTCTCTGTTGATCTGATAGTTTATCTGCGAACCACTCCCGAAATCTGCTACCAGAGATTAAAGATGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211995.2 ENSMUST00000212209.2 |
||
| 3UTR GCA 72 bp | AAGGTATTTTCTGATCCAATAGAGATGACTTCTTCATaGTCGTGGTCCATGACATCTGCTCAGATGGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KVFSDPIEMTSS*SWSMTSAQMEK Trigger: TTTTTCCATCTGAGCAGATGTCATGGACCACGAGCATGAAGAAGTCATCTCTATTGGATCAGAAAATACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| CDS-3UTR GCA 90 bp | GCTCAGCTGGCTGCCCTTGGCCTCGCTCAGCAAAGGGTAAAGTGTCCAGGTCCCTCCAGCATGGTGAGCTaGACGTACGTCTGCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQLAALGLAQQRVKCPGPSSMVS*TYVCSV Trigger: CACACTGCAGACGTACGTGCAGCTCACCATGCTGGA...GGGACCTGGACACTTTACCCTTTGCTGAGCGAGGCCAAGGGCAGCCAGCTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| CDS-3UTR GCA 90 bp | GGACCAAGAGCTGGACTCTTGGCCCTCTTTCTAGCTCCCAGGCAGCTAAACAGGCACCAGAACAGGGGCTaGAGCTGGGAAGAGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPRAGLLALFLAPRQLNRHQNRG*SWEEAP Trigger: GGGAGCCTCTTCCCAGCTGCAGCCCCTGTTCTGGTG...CCTGTTTAGCTGCCTGGGAGCTAGAAAGAGGGCCAAGAGTCCAGCTCTTGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGAGCTGGACTCTTGGCCCTCTTTCTAGCTCCCAGGCAGCTAAACAGGGGAGCTGGTCCAGCATGGTaGGCTGCACGTACGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRAGLLALFLAPRQLNRGAGPAW*AARTSA Trigger: TGCAGACGTACGTGCAGCTCACCATGCTGGACCAGC...TCCCCTGTTTAGCTGCCTGGGAGCTAGAAAGAGGGCCAAGAGTCCAGCTCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS-3UTR CCA 90 bp | AGGACTCTGGCACCAAGCAGAGGCCGATCCAGGAGTCCCCAGTGGACACCGAGGAGAGGGTTATGGCCATaGACATTTCTCCACTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTLAPSRGRSRSPQWTPRRGLWP*TFLHLS Trigger: GCTCAAGTGGAGAAATGTCCATGGCCATAACCCTCT...CCTCGGTGTCCACTGGGGACTCCTGGATCGGCCTCTGCTTGGTGCCAGAGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR CAA 72 bp | TTGACGAGTCCCCACACCTCTCTGGGCTTCAAATCCTaGCCTGGGGTGGAAGACTGCTCCCTCACCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTSPHTSLGFKS*PGVEDCSLTHE Trigger: CTCATGGGTGAGGGAGCAGTCTTCCACCCCAGGCAAGGATTTGAAGCCCAGAGAGGTGTGGGGACTCGTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| CDS-3UTR CCA 90 bp | GCTCAGCTGGCTGCCCTTGGCCTCGCTCAGCAAAGGGTAAAGTGTCCAGGTCCCCGACGTCTGTTGTATTaGAGAAGAACTCCAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: AQLAALGLAQQRVKCPGPRRLLY*RRTPGM Trigger: CATGCCTGGAGTTCTTCTCCAATACAACAGACGTCG...GGGACCTGGACACTTTACCCTTTGCTGAGCGAGGCCAAGGGCAGCCAGCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR CAA 72 bp | TCTGAATGGTCCCAGCTCCCTCCACAATGCTCTGGCTaGACGAGTCCCCACACCTCTCTGGGCTTCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SEWSQLPPQCSG*TSPHTSLGFKS Trigger: GGATTTGAAGCCCAGAGAGGTGTGGGGACTCGTCAAGCCAGAGCATTGTGGAGGGAGCTGGGACCATTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGGTTTATCCATTGCTGGACTGCAGGTGCTGATGGACAATCTCCCTGGATGGCTGGTCCAGCATGGTaGGCTGCACGTACGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRFIHCWTAGADGQSPWMAGPAW*AARTSA Trigger: TGCAGACGTACGTGCAGCTCACCATGCTGGACCAGC...CATCCAGGGAGATTGTCCATCAGCACCTGCAGTCCAGCAATGGATAAACCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTGTATCATCTGTGTCCAGTCTTTTCCAGATGCACTCCATCCATTCTAGAACGGGCATCTTCCCACTaGGGGCGCGTGTGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLYHLCPVFSRCTPSILERASSH*GRVCWS Trigger: GGACCAGCACACGCGCCCTCAGTGGGAAGATGCCCG...TTCTAGAATGGATGGAGTGCATCTGGAAAAGACTGGACACAGATGATACAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211995.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTGTGCTGTGCTTCTCCAGGGTATACGGTCATCATTCCCCTGTATCATCTGAACAGGGGCTGCAGCTaGGAAGAGGCTCCCGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLCCASPGYTVIIPLYHLNRGCS*EEAPVD Trigger: GTCAACGGGAGCCTCTTCCCAGCTGCAGCCCCTGTT...CAGATGATACAGGGGAATGATGACCGTATACCCTGGAGAAGCACAGCACAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGACTCTGGCACCAAGCAGAGGCCGATCCAGGAGTCCCCAGTGGACACCGATGTCGTCTTCCCACTTaGAATATTGCCCTCAATACA | + |
|
Preference number: 4 (lower is better) Translates to: QGLWHQAEADPGVPSGHRCRLPT*NIALNT Trigger: TGTATTGAGGGCAATATTGCAAGTGGGAAGACGACA...TCGGTGTCCACTGGGGACTCCTGGATCGGCCTCTGCTTGGTGCCAGAGTCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| 3UTR CAA 72 bp | TCCAGTCTCACGGTCCTGAGGAATGGCCGGCCTCTCTaGGTCATGACTGATTCAAGTAACAGCTGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLTVLRNGRPL*VMTDSSNSCTF Trigger: GAAGGTGCAGCTGTTACTTGAATCAGTCATGACCAAGAGAGGCCGGCCATTCCTCAGGACCGTGAGACTGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGGAACAGCTTAGGAGGAGGCAGCCCAAACCAGGTATCTGAATGGTCCCAGCGACGTCTGTTGTATTaGAGAAGAACTCCAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VGNSLGGGSPNQVSEWSQRRLLY*RRTPGM Trigger: CATGCCTGGAGTTCTTCTCCAATACAACAGACGTCG...CTGGGACCATTCAGATACCTGGTTTGGGCTGCCTCCTCCTAAGCTGTTCCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| CDS-3UTR CCA 90 bp | GGACCAAGAGCTGGACTCTTGGCCCTCTTTCTAGCTCCCAGGCAGCTAAACAGGCGACGTCTGTTGTATTaGAGAAGAACTCCAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GPRAGLLALFLAPRQLNRRRLLY*RRTPGM Trigger: CATGCCTGGAGTTCTTCTCCAATACAACAGACGTCG...CCTGTTTAGCTGCCTGGGAGCTAGAAAGAGGGCCAAGAGTCCAGCTCTTGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTTTTCCAGATGCACTCCATCCATTCTAGAATGTCAAGAGCAGCAAGGCTTAACAGGGGCTGCAGCTaGGAAGAGGCTCCCGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLFQMHSIHSRMSRAARLNRGCS*EEAPVD Trigger: GTCAACGGGAGCCTCTTCCCAGCTGCAGCCCCTGTT...AAGCCTTGCTGCTCTTGACATTCTAGAATGGATGGAGTGCATCTGGAAAAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
||
| 3UTR CAA 72 bp | AATTGGTCCAAACAGAAAGGACCAAGAGCTGGACTCTaGGCCCTCTTTCTAGCTCCCAGGCAGCTAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NWSKQKGPRAGL*ALFLAPRQLNR Trigger: CCTGTTTAGCTGCCTGGGAGCTAGAAAGAGGGCCAAGAGTCCAGCTCTTGGTCCTTTCTGTTTGGACCAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| 3UTR CAA 72 bp | AGGCTCAGAGGGTTATGGCCATGGACATTTCTCCACTaGAGCACAGGCTCCATTAACACCTCGACGTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLRGLWPWTFLH*STGSINTSTSV Trigger: AACAGACGTCGAGGTGTTAATGGAGCCTGTGCTCAAGTGGAGAAATGTCCATGGCCATAACCCTCTGAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212209.2 ENSMUST00000212854.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGGTTTATCCATTGCTGGACTGCAGGTGCTGATGGACAATCTCCCTGGATGGGACATTTCTCCACTTaGGCACAGGCTCCATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: LRFIHCWTAGADGQSPWMGHFST*AQAPLT Trigger: TGTTAATGGAGCCTGTGCTCAAGTGGAGAAATGTCC...CATCCAGGGAGATTGTCCATCAGCACCTGCAGTCCAGCAATGGATAAACCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGCAAAGCTAAGGTATTTTCTGATCCAATAGAGATGACTTCTTCATGCTCGCACCAGAACAGGGGCTaGAGCTGGGAAGAGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSKAKVFSDPIEMTSSCSHQNRG*SWEEAP Trigger: GGGAGCCTCTTCCCAGCTGCAGCCCCTGTTCTGGTG...CGAGCATGAAGAAGTCATCTCTATTGGATCAGAAAATACCTTAGCTTTGCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
||
| 3UTR CAA 72 bp | AGCACAGGCTCCATTAACACCTCGACGTCTGTTGTATaGGAGAAGAACTCCAGGCATGTCGTCTTCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: STGSINTSTSVV*EKNSRHVVFPL Trigger: AAGTGGGAAGACGACATGCCTGGAGTTCTTCTCCAATACAACAGACGTCGAGGTGTTAATGGAGCCTGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212209.2 ENSMUST00000212854.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGGTTTATCCATTGCTGGACTGCAGGTGCTGATGGACAATCTCCCTGGATGTCTTGCGCTGTAAATTaGCCTTTCCATCAACCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LRFIHCWTAGADGQSPWMSCAVN*PFHQPY Trigger: GTACGGTTGATGGAAAGGTCAATTTACAGCGCAAGA...CATCCAGGGAGATTGTCCATCAGCACCTGCAGTCCAGCAATGGATAAACCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTGTGCTGTGCTTCTCCAGGGTATACGGTCATCATTCCCCTGTATCATCTGAGACATCAATGTTCCTaGCGATCCAGTCAAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: SLCCASPGYTVIIPLYHLRHQCS*RSSQTT Trigger: AGTGGTTTGACTGGATCGTCAGGAACATTGATGTCT...CAGATGATACAGGGGAATGATGACCGTATACCCTGGAGAAGCACAGCACAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
||
| CDS-3UTR TCA 90 bp | ATACGGTCATCATTCCCCTGTATCATCTGTGTCCAGTCTTTTCCAGATGCACTCGGTATTCCATCGGAATaGCTTTCTCCTCTTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: IRSSFPCIICVQSFPDALGIPSE*LSPLPG Trigger: GCCGGGAAGAGGAGAAAGTCATTCCGATGGAATACC...GAGTGCATCTGGAAAAGACTGGACACAGATGATACAGGGGAATGATGACCGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGTGGTTCGCAGATAAACTATCAGATCAACAGAGACATCAATGTTCCTGACTCCAGCATGGTGAGCTaGACGTACGTCTGCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSGSQINYQINRDINVPDSSMVS*TYVCSV Trigger: CACACTGCAGACGTACGTGCAGCTCACCATGCTGGA...GTCAGGAACATTGATGTCTCTGTTGATCTGATAGTTTATCTGCGAACCACTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211995.2 |
||
| CDS-3UTR TCA 90 bp | TTATCCATTGCTGGACTGCAGGTGCTGATGGACAATCTCCCTGGATGCTACTCTTCTTGCGCTGTAAATTaGCCTTTCCATCAACCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSIAGLQVLMDNLPGCYSSCAVN*PFHQPY Trigger: GTACGGTTGATGGAAAGGTCAATTTACAGCGCAAGA...AGAGTAGCATCCAGGGAGATTGTCCATCAGCACCTGCAGTCCAGCAATGGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
||
| CDS-3UTR GCA 90 bp | TCCATTGCTGGACTGCAGGTGCTGATGGACAATCTCCCTGGATGCTACTCTTCATGTCGTCTTCCCACTTaGAATATTGCCCTCAATACA | + |
|
Preference number: 4 (lower is better) Translates to: SIAGLQVLMDNLPGCYSSCRLPT*NIALNT Trigger: TGTATTGAGGGCAATATTGCAAGTGGGAAGACGACA...TGAAGAGTAGCATCCAGGGAGATTGTCCATCAGCACCTGCAGTCCAGCAATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
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| CDS-3UTR CCA 90 bp | TCAGGTTTATCCATTGCTGGACTGCAGGTGCTGATGGACAATCTCCCTGGATGCATTTTCTCCAAGTTGTaGTCAGCCTCAATCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGLSIAGLQVLMDNLPGCIFSKL*SASITR Trigger: TCTGGTGATTGAGGCTGACCACAACTTGGAGAAAAT...GCATCCAGGGAGATTGTCCATCAGCACCTGCAGTCCAGCAATGGATAAACCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
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| CDS-3UTR TCA 90 bp | TTCAAAGTTCCTGCCTTTCTCAGGTTTATCCATTGCTGGACTGCAGGTGCTGATGGACATTTCTCCACTTaGGCACAGGCTCCATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: FKVPAFLRFIHCWTAGADGHFST*AQAPLT Trigger: TGTTAATGGAGCCTGTGCTCAAGTGGAGAAATGTCC...ATCAGCACCTGCAGTCCAGCAATGGATAAACCTGAGAAAGGCAGGAACTTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS-3UTR TCA 90 bp | AATTGGTCCAAACAGAAAGGACCAAGAGCTGGACTCTTGGCCCTCTTTCTAGCTAGACATCAATGTTCCTaGCGATCCAGTCAAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: NWSKQKGPRAGLLALFLARHQCS*RSSQTT Trigger: AGTGGTTTGACTGGATCGTCAGGAACATTGATGTCT...AGCTAGAAAGAGGGCCAAGAGTCCAGCTCTTGGTCCTTTCTGTTTGGACCAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGTGCACAGTTACGGCTCAGCAAAGCTAAGGTATTTTCTGATCCAATAGAGGGTATTCCATCGGAATaGCTTTCTCCTCTTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSAQLRLSKAKVFSDPIEGIPSE*LSPLPG Trigger: GCCGGGAAGAGGAGAAAGTCATTCCGATGGAATACC...CTCTATTGGATCAGAAAATACCTTAGCTTTGCTGAGCCGTAACTGTGCACTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
||
| CDS-3UTR CCA 90 bp | AAAGATGCCCCCATGAGTACTGCTGGTTCAAAGTTCCTGCCTTTCTCAGGTTTAAGAGGGTTATGGCCATaGACATTTCTCCACTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KDAPMSTAGSKFLPFSGLRGLWP*TFLHLS Trigger: GCTCAAGTGGAGAAATGTCCATGGCCATAACCCTCT...TAAACCTGAGAAAGGCAGGAACTTTGAACCAGCAGTACTCATGGGGGCATCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS-3UTR CCA 90 bp | GGGTATACGGTCATCATTCCCCTGTATCATCTGTGTCCAGTCTTTTCCAGATGCATTTTCTCCAAGTTGTaGTCAGCCTCAATCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GYTVIIPLYHLCPVFSRCIFSKL*SASITR Trigger: TCTGGTGATTGAGGCTGACCACAACTTGGAGAAAAT...GCATCTGGAAAAGACTGGACACAGATGATACAGGGGAATGATGACCGTATACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
||
| 3UTR CAA 72 bp | GGATGCTACTCTTCATACTACCAAAAGGGCCAAGAATaGGTCCAAACAGAAAGGACCAAGAGCTGGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GCYSSYYQKGQE*VQTERTKSWTL Trigger: AAGAGTCCAGCTCTTGGTCCTTTCTGTTTGGACCAATTCTTGGCCCTTTTGGTAGTATGAAGAGTAGCATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGAGTTAATATCCGGGCCCGGTTTTGTTCAAAGAGTTCTAACATTTTCTCCGGACATTTCTCCACTTaGGCACAGGCTCCATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: SGVNIRARFCSKSSNIFSGHFST*AQAPLT Trigger: TGTTAATGGAGCCTGTGCTCAAGTGGAGAAATGTCC...GGAGAAAATGTTAGAACTCTTTGAACAAAACCGGGCCCGGATATTAACTCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211995.2 |
||
| 3UTR CAA 72 bp | TATTGGAGAAGAACTCCAGGCATGTCGTCTTCCCACTaGCAATATTGCCCTCAATACAAACCACTGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YWRRTPGMSSSH*QYCPQYKPLLF Trigger: AAAAAGCAGTGGTTTGTATTGAGGGCAATATTGCAAGTGGGAAGACGACATGCCTGGAGTTCTTCTCCAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212854.2 |
||
| CDS-3UTR GCA 90 bp | CAGTTACGGCTCAGCAAAGCTAAGGTATTTTCTGATCCAATAGAGATGACTTCTTGTCGTCTTCCCACTTaGAATATTGCCCTCAATACA | + |
|
Preference number: 4 (lower is better) Translates to: QLRLSKAKVFSDPIEMTSCRLPT*NIALNT Trigger: TGTATTGAGGGCAATATTGCAAGTGGGAAGACGACA...AGAAGTCATCTCTATTGGATCAGAAAATACCTTAGCTTTGCTGAGCCGTAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS GCA 90 bp | GGTGGCACAAAAGCACTAGTTACCCGGAGGCCAGGCGCGGCGAGGTaGCCACAGCGGCCCGGCGCCCGAATCGAGGCTCCCGGGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGTKALVTRRPGAAR*PQRPGARIEAPGAP Trigger: GGGAGCCCCGGGAGCCTCGATTCGGGCGCCGGGCCGCTGTGGGCACCTCGCCGCGCCTGGCCTCCGGGTAACTAGTGCTTTTGTGCCACC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212854.2 |
||
| CDS GCA 90 bp | CTTATCATTTTCTCTATCTTTATCCGGAGGCCAGGCGCGGCGAGGTaGCCACAGCGGCCCGGCGCCCGAATCGAGGCTCCCGGGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LIIFSIFIRRPGAAR*PQRPGARIEAPGAP Trigger: GGGAGCCCCGGGAGCCTCGATTCGGGCGCCGGGCCGCTGTGGGCACCTCGCCGCGCCTGGCCTCCGGATAAAGATAGAGAAAATGATAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS-3UTR CAA 90 bp | GCTCAGCTGGCTGCCCTTGGCCTCGCTCAGCAAAGGGTAAAGTGTCCAGGTCCCTTCCCACTTGCAATATaGCCCTCAATACAAACCACT | + |
|
Preference number: 5 (lower is better) Translates to: AQLAALGLAQQRVKCPGPFPLAI*PSIQTT Trigger: AGTGGTTTGTATTGAGGGCAATATTGCAAGTGGGAA...GGGACCTGGACACTTTACCCTTTGCTGAGCGAGGCCAAGGGCAGCCAGCTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTCCCAGCTCCCTCCACAATGCTCTGGCTTGACGAGTCCCCACACCTCTCTTGGACATTTCTCCACTaGAGCACAGGCTCCATTAAC | + |
|
Preference number: 5 (lower is better) Translates to: MVPAPSTMLWLDESPHLSWTFLH*STGSIN Trigger: GTTAATGGAGCCTGTGCTCAAGTGGAGAAATGTCCA...AGAGAGGTGTGGGGACTCGTCAAGCCAGAGCATTGTGGAGGGAGCTGGGACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTCCCAGCTCCCTCCACAATGCTCTGGCTTGACGAGTCCCCACACCTCTCTATCTTGCGCTGTAAATaGACCTTTCCATCAACCGTA | + |
|
Preference number: 5 (lower is better) Translates to: MVPAPSTMLWLDESPHLSILRCK*TFPSTV Trigger: TACGGTTGATGGAAAGGTCAATTTACAGCGCAAGAT...AGAGAGGTGTGGGGACTCGTCAAGCCAGAGCATTGTGGAGGGAGCTGGGACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050211.7 |
||
| CDS-3UTR CAA 90 bp | TCAGGTTTATCCATTGCTGGACTGCAGGTGCTGATGGACAATCTCCCTGGATGCACACCTCGACGTCTGTaGTATTGGAGAAGAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGLSIAGLQVLMDNLPGCTPRRL*YWRRTP Trigger: TGGAGTTCTTCTCCAATACAACAGACGTCGAGGTGT...GCATCCAGGGAGATTGTCCATCAGCACCTGCAGTCCAGCAATGGATAAACCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTTCAAAGTTCCTGCCTTTCTCAGGTTTATCCATTGCTGGACTGCAGGTGCTCGACGTCTGTTGTATaGGAGAAGAACTCCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LVQSSCLSQVYPLLDCRCSTSVV*EKNSRH Trigger: ATGCCTGGAGTTCTTCTCCAATACAACAGACGTCGA...GCACCTGCAGTCCAGCAATGGATAAACCTGAGAAAGGCAGGAACTTTGAACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGGTTCAAAGTTCCTGCCTTTCTCAGGTTTATCCATTGCTGGACTGCAGGTTCGACGTCTGTTGTATaGGAGAAGAACTCCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CWFKVPAFLRFIHCWTAGSTSVV*EKNSRH Trigger: ATGCCTGGAGTTCTTCTCCAATACAACAGACGTCGA...ACCTGCAGTCCAGCAATGGATAAACCTGAGAAAGGCAGGAACTTTGAACCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS-3UTR CAA 90 bp | GAATTGGTCCAAACAGAAAGGACCAAGAGCTGGACTCTTGGCCCTCTTTCTAGCTTCCCACTTGCAATATaGCCCTCAATACAAACCACT | + |
|
Preference number: 5 (lower is better) Translates to: ELVQTERTKSWTLGPLSSFPLAI*PSIQTT Trigger: AGTGGTTTGTATTGAGGGCAATATTGCAAGTGGGAA...GCTAGAAAGAGGGCCAAGAGTCCAGCTCTTGGTCCTTTCTGTTTGGACCAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS-3UTR CAA 90 bp | GTAACAGCTGCACCTTCAGTGCACAGTTACGGCTCAGCAAAGCTAAGGTATTTTACACCTCGACGTCTGTaGTATTGGAGAAGAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VTAAPSVHSYGSAKLRYFTPRRL*YWRRTP Trigger: TGGAGTTCTTCTCCAATACAACAGACGTCGAGGTGT...AAAATACCTTAGCTTTGCTGAGCCGTAACTGTGCACTGAAGGTGCAGCTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
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| CDS-3UTR CAA 90 bp | AACAGCTGCACCTTCAGTGCACAGTTACGGCTCAGCAAAGCTAAGGTATTTTCTTGGACATTTCTCCACTaGAGCACAGGCTCCATTAAC | + |
|
Preference number: 5 (lower is better) Translates to: NSCTFSAQLRLSKAKVFSWTFLH*STGSIN Trigger: GTTAATGGAGCCTGTGCTCAAGTGGAGAAATGTCCA...AGAAAATACCTTAGCTTTGCTGAGCCGTAACTGTGCACTGAAGGTGCAGCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
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| CDS-3UTR CAA 90 bp | GTAACAGCTGCACCTTCAGTGCACAGTTACGGCTCAGCAAAGCTAAGGTATTTTATGTCGTCTTCCCACTaGCAATATTGCCCTCAATAC | + |
|
Preference number: 5 (lower is better) Translates to: VTAAPSVHSYGSAKLRYFMSSSH*QYCPQY Trigger: GTATTGAGGGCAATATTGCAAGTGGGAAGACGACAT...AAAATACCTTAGCTTTGCTGAGCCGTAACTGTGCACTGAAGGTGCAGCTGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
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| CDS-3UTR CAA 90 bp | ATCAGATCAACAGAGACATCAATGTTCCTGACGATCCAGTCAAACCACTCAGACACACCTCGACGTCTGTaGTATTGGAGAAGAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IRSTETSMFLTIQSNHSDTPRRL*YWRRTP Trigger: TGGAGTTCTTCTCCAATACAACAGACGTCGAGGTGT...GTCTGAGTGGTTTGACTGGATCGTCAGGAACATTGATGTCTCTGTTGATCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211995.2 |
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| CDS-3UTR CAA 90 bp | TATCAGATCAACAGAGACATCAATGTTCCTGACGATCCAGTCAAACCACTCAGATCGACGTCTGTTGTATaGGAGAAGAACTCCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: YQINRDINVPDDPVKPLRSTSVV*EKNSRH Trigger: ATGCCTGGAGTTCTTCTCCAATACAACAGACGTCGA...TCTGAGTGGTTTGACTGGATCGTCAGGAACATTGATGTCTCTGTTGATCTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211995.2 |
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| CDS-3UTR CAA 90 bp | AGTCTTTTCCAGATGCACTCCATCCATTCTAGAATGTCAAGAGCAGCAAGGCTTTTCCCACTTGCAATATaGCCCTCAATACAAACCACT | + |
|
Preference number: 5 (lower is better) Translates to: SLFQMHSIHSRMSRAARLFPLAI*PSIQTT Trigger: AGTGGTTTGTATTGAGGGCAATATTGCAAGTGGGAA...AAGCCTTGCTGCTCTTGACATTCTAGAATGGATGGAGTGCATCTGGAAAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
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| CDS-3UTR CAA 90 bp | CCATCCATTCTAGAATGTCAAGAGCAGCAAGGCTTAAATTGTCTTTGTTGGCAATGGACATTTCTCCACTaGAGCACAGGCTCCATTAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSILECQEQQGLNCLCWQWTFLH*STGSIN Trigger: GTTAATGGAGCCTGTGCTCAAGTGGAGAAATGTCCA...TTGCCAACAAAGACAATTTAAGCCTTGCTGCTCTTGACATTCTAGAATGGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS-3UTR CAA 90 bp | ACTCCATCCATTCTAGAATGTCAAGAGCAGCAAGGCTTAAATTGTCTTTGTTGGATGTCGTCTTCCCACTaGCAATATTGCCCTCAATAC | + |
|
Preference number: 5 (lower is better) Translates to: TPSILECQEQQGLNCLCWMSSSH*QYCPQY Trigger: GTATTGAGGGCAATATTGCAAGTGGGAAGACGACAT...CCAACAAAGACAATTTAAGCCTTGCTGCTCTTGACATTCTAGAATGGATGGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
||
| CDS-3UTR CAA 90 bp | TCCATCCATTCTAGAATGTCAAGAGCAGCAAGGCTTAAATTGTCTTTGTTGGCAATCTTGCGCTGTAAATaGACCTTTCCATCAACCGTA | + |
|
Preference number: 5 (lower is better) Translates to: SIHSRMSRAARLKLSLLAILRCK*TFPSTV Trigger: TACGGTTGATGGAAAGGTCAATTTACAGCGCAAGAT...TGCCAACAAAGACAATTTAAGCCTTGCTGCTCTTGACATTCTAGAATGGATGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
||
| CDS GCA 72 bp | AAAGCACTAGTTACCCGGAGGCCAGGCGCGGCGAGGTaGCCACAGCGGCCCGGCGCCCGAATCGAGGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: KALVTRRPGAAR*PQRPGARIEAP Trigger: GGGAGCCTCGATTCGGGCGCCGGGCCGCTGTGGGCACCTCGCCGCGCCTGGCCTCCGGGTAACTAGTGCTTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212854.2 |
||
| CDS GCA 72 bp | TTCTCTATCTTTATCCGGAGGCCAGGCGCGGCGAGGTaGCCACAGCGGCCCGGCGCCCGAATCGAGGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FSIFIRRPGAAR*PQRPGARIEAP Trigger: GGGAGCCTCGATTCGGGCGCCGGGCCGCTGTGGGCACCTCGCCGCGCCTGGCCTCCGGATAAAGATAGAGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050211.7 ENSMUST00000211995.2 ENSMUST00000212275.2 |
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| CDS CAA 90 bp | CACTTCTATACAGGTTTTCTACAAAAATGTATCTTGCGCTGTAAATaGACCTTTCCATCAACCGTACAGGTGACATCTGAGGGCGCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HFYTGFLQKCILRCK*TFPSTVQVTSEGAC Trigger: ACACGCGCCCTCAGATGTCACCTGTACGGTTGATGGAAAGGTCAATTTACAGCGCAAGATACATTTTTGTAGAAAACCTGTATAGAAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
||
| CDS CAA 90 bp | CGGGCATCTTCCCACTTCTATACAGGTTTTCTACAAAAATGTATCTaGCGCTGTAAATTGACCTTTCCATCAACCGTACAGGTGACATCT | + |
|
Preference number: 6 (lower is better) Translates to: RASSHFYTGFLQKCI*RCKLTFPSTVQVTS Trigger: AGATGTCACCTGTACGGTTGATGGAAAGGTCAATTTACAGCGCAAGATACATTTTTGTAGAAAACCTGTATAGAAGTGGGAAGATGCCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
||
| CDS CAA 72 bp | ACAGGTTTTCTACAAAAATGTATCTTGCGCTGTAAATaGACCTTTCCATCAACCGTACAGGTGACATCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TGFLQKCILRCK*TFPSTVQVTSE Trigger: CTCAGATGTCACCTGTACGGTTGATGGAAAGGTCAATTTACAGCGCAAGATACATTTTTGTAGAAAACCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
||
| CDS CAA 72 bp | TCCCACTTCTATACAGGTTTTCTACAAAAATGTATCTaGCGCTGTAAATTGACCTTTCCATCAACCGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: SHFYTGFLQKCI*RCKLTFPSTVQ Trigger: CTGTACGGTTGATGGAAAGGTCAATTTACAGCGCAAGATACATTTTTGTAGAAAACCTGTATAGAAGTGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050211.7 ENSMUST00000212275.2 |
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