Pregenerated sensors for TK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025574Ensembl transcript IDs: ENSMUST00000026661.4
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCCAGCCACCAACAAGGAAGAAACTAGCCCCACCAGTGTCACAATaGTGGACAGCTCTGTCCTCACCTTTGGCTGAACACGGGACCGCT | + |
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Preference number: 1 (lower is better) Translates to: TQPPTRKKLAPPVSQ*WTALSSPLAEHGTA Trigger: AGCGGTCCCGTGTTCAGCCAAAGGTGAGGACAGAGCTGTCCAGCATTGTGACACTGGTGGGGCTAGTTTCTTCCTTGTTGGTGGCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| 3UTR CCA 90 bp | CAGCCACCAACAAGGAAGAAACTAGCCCCACCAGTGTCACAATGCTaGACAGCTCTGTCCTCACCTTTGGCTGAACACGGGACCGCTAGC | + |
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Preference number: 1 (lower is better) Translates to: QPPTRKKLAPPVSQC*TALSSPLAEHGTAS Trigger: GCTAGCGGTCCCGTGTTCAGCCAAAGGTGAGGACAGAGCTGTCCAGCATTGTGACACTGGTGGGGCTAGTTTCTTCCTTGTTGGTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| 3UTR TCA 90 bp | GGGCTCCAGTCTGCATTGAGGCATCTTGGCAATCAAGAAGGGAACTaGAAACGGCTTCAGCGAGTGGCAGCCTGTTCAAGGTACATTGTC | + |
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Preference number: 1 (lower is better) Translates to: GLQSALRHLGNQEGN*KRLQRVAACSRYIV Trigger: GACAATGTACCTTGAACAGGCTGCCACTCGCTGAAGCCGTTTTCAGTTCCCTTCTTGATTGCCAAGATGCCTCAATGCAGACTGGAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| 3UTR-3UTR CCA 90 bp | GCTGAACACGGGACCGCTAGCCACCAGGCAGGGTCTGGGCTCCAGTCTGCATTGTCTGAGAGTCCAACCTaGGTAGGAGCTGGCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: AEHGTASHQAGSGLQSALSESPT*VGAGRP Trigger: AGGCCTGCCAGCTCCTACCCAGGTTGGACTCTCAGA...CAATGCAGACTGGAGCCCAGACCCTGCCTGGTGGCTAGCGGTCCCGTGTTCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGTCCTCACCTTTGGCTGAACACGGGACCGCTAGCCACCAGGCAGGGTCTGGCTCCAGTCTGCATTaGGGCATCTTGGCAATCAAG | + |
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Preference number: 2 (lower is better) Translates to: ALSSPLAEHGTASHQAGSGSSLH*GILAIK Trigger: CTTGATTGCCAAGATGCCTCAATGCAGACTGGAGCC...AGACCCTGCCTGGTGGCTAGCGGTCCCGTGTTCAGCCAAAGGTGAGGACAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| 3UTR-3UTR CCA 90 bp | CTTGGTGAGGGTGGGGCTCTGAGACTGAAACCCAGCCACCAACAAGGAAGAAACCCACCAGGCAGGGTCTaGGCTCCAGTCTGCATTGAG | + |
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Preference number: 2 (lower is better) Translates to: LGEGGALRLKPSHQQGRNPPGRV*APVCIE Trigger: CTCAATGCAGACTGGAGCCCAGACCCTGCCTGGTGG...GTTTCTTCCTTGTTGGTGGCTGGGTTTCAGTCTCAGAGCCCCACCCTCACCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGTCCTCACCTTTGGCTGAACACGGGACCGCTAGCCACCAGGCAGGGTCTTGCATTGAGGCATCTTaGCAATCAAGAAGGGAACTG | + |
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Preference number: 2 (lower is better) Translates to: ALSSPLAEHGTASHQAGSCIEAS*QSRREL Trigger: CAGTTCCCTTCTTGATTGCCAAGATGCCTCAATGCA...AGACCCTGCCTGGTGGCTAGCGGTCCCGTGTTCAGCCAAAGGTGAGGACAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| 3UTR-3UTR CCA 90 bp | TGGGGCTCTGAGACTGAAACCCAGCCACCAACAAGGAAGAAACTAGCCCCACCAAACGGCTTCAGCGAGTaGCAGCCTGTTCAAGGTACA | + |
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Preference number: 2 (lower is better) Translates to: WGSETETQPPTRKKLAPPNGFSE*QPVQGT Trigger: TGTACCTTGAACAGGCTGCCACTCGCTGAAGCCGTT...TGGTGGGGCTAGTTTCTTCCTTGTTGGTGGCTGGGTTTCAGTCTCAGAGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| 3UTR-3UTR CCA 90 bp | GGTTCTGAGGAGAGAATGTTTAGGCATAAATGGGGGAGCTGTGAGAGGCCTGGACTCTGTCCTCACCTTTaGCTGAACACGGGACCGCTA | + |
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Preference number: 2 (lower is better) Translates to: GSEERMFRHKWGSCERPGLCPHL*LNTGPL Trigger: TAGCGGTCCCGTGTTCAGCCAAAGGTGAGGACAGAG...TCCAGGCCTCTCACAGCTCCCCCATTTATGCCTAAACATTCTCTCCTCAGAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| 3UTR-3UTR CAA 90 bp | CTTGGTGAGGGTGGGGCTCTGAGACTGAAACCCAGCCACCAACAAGGAAGAAACGGGCTCCAGTCTGCATaGAGGCATCTTGGCAATCAA | + |
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Preference number: 3 (lower is better) Translates to: LGEGGALRLKPSHQQGRNGLQSA*RHLGNQ Trigger: TTGATTGCCAAGATGCCTCAATGCAGACTGGAGCCC...GTTTCTTCCTTGTTGGTGGCTGGGTTTCAGTCTCAGAGCCCCACCCTCACCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| 3UTR CCA 72 bp | ACAAGGAAGAAACTAGCCCCACCAGTGTCACAATGCTaGACAGCTCTGTCCTCACCTTTGGCTGAACACGGG | + |
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Preference number: 3 (lower is better) Translates to: TRKKLAPPVSQC*TALSSPLAEHG Trigger: CCCGTGTTCAGCCAAAGGTGAGGACAGAGCTGTCCAGCATTGTGACACTGGTGGGGCTAGTTTCTTCCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| 3UTR TCA 72 bp | TCTGCATTGAGGCATCTTGGCAATCAAGAAGGGAACTaGAAACGGCTTCAGCGAGTGGCAGCCTGTTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: SALRHLGNQEGN*KRLQRVAACSR Trigger: CCTTGAACAGGCTGCCACTCGCTGAAGCCGTTTTCAGTTCCCTTCTTGATTGCCAAGATGCCTCAATGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| 3UTR CCA 72 bp | GCAATCAAGAAGGGAACTGAAAACGGCTTCAGCGAGTaGCAGCCTGTTCAAGGTACATTGTCCATTAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: AIKKGTENGFSE*QPVQGTLSIRN Trigger: ATTCCTAATGGACAATGTACCTTGAACAGGCTGCCACTCGCTGAAGCCGTTTTCAGTTCCCTTCTTGATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR GCA 90 bp | GCTGAACACGGGACCGCTAGCCACCAGGCAGGGTCTGGGCTCCAGTCTGCATTGAAGGCCTCTCCCGGCTaGCCCAGCACCAGACAGTTC | + |
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Preference number: 4 (lower is better) Translates to: AEHGTASHQAGSGLQSALKASPG*PSTRQF Trigger: GAACTGTCTGGTGCTGGGGCAGCCGGGAGAGGCCTT...CAATGCAGACTGGAGCCCAGACCCTGCCTGGTGGCTAGCGGTCCCGTGTTCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR CCA 90 bp | GCTGAACACGGGACCGCTAGCCACCAGGCAGGGTCTGGGCTCCAGTCTGCATTGTCTTGCTGGGGGAGCTaGGCAGCACGGTGGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: AEHGTASHQAGSGLQSALSCWGS*AARWAD Trigger: ATCTGCCCACCGTGCTGCCCAGCTCCCCCAGCAAGA...CAATGCAGACTGGAGCCCAGACCCTGCCTGGTGGCTAGCGGTCCCGTGTTCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR GCA 90 bp | CTGTCCTCACCTTTGGCTGAACACGGGACCGCTAGCCACCAGGCAGGGTCTGGGCATGCAGGCTGGCAATaGGTCCATGGTGTTCCGATC | + |
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Preference number: 4 (lower is better) Translates to: LSSPLAEHGTASHQAGSGHAGWQ*VHGVPI Trigger: GATCGGAACACCATGGACGCATTGCCAGCCTGCATG...CCCAGACCCTGCCTGGTGGCTAGCGGTCCCGTGTTCAGCCAAAGGTGAGGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR GCA 90 bp | GCTGAACACGGGACCGCTAGCCACCAGGCAGGGTCTGGGCTCCAGTCTGCATTGCCAGGTTCAAGATGCTaGCGAAAGCCTTCCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: AEHGTASHQAGSGLQSALPGSRC*RKPSSG Trigger: TCCAGAGGAAGGCTTTCGGCAGCATCTTGAACCTGG...CAATGCAGACTGGAGCCCAGACCCTGCCTGGTGGCTAGCGGTCCCGTGTTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR CCA 90 bp | GGTTCTGAGGAGAGAATGTTTAGGCATAAATGGGGGAGCTGTGAGAGGCCTGGAGCCCCCGAGTCTTGCTaGGGGAGCTGGGCAGCACGG | + |
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Preference number: 4 (lower is better) Translates to: GSEERMFRHKWGSCERPGAPESC*GSWAAR Trigger: CCGTGCTGCCCAGCTCCCCCAGCAAGACTCGGGGGC...TCCAGGCCTCTCACAGCTCCCCCATTTATGCCTAAACATTCTCTCCTCAGAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| 3UTR CAA 72 bp | AACGGCTTCAGCGAGTGGCAGCCTGTTCAAGGTACATaGTCCATTAGGAATGGCAGGCCCGCGCTCCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: NGFSEWQPVQGT*SIRNGRPALPL Trigger: CAGGGGGAGCGCGGGCCTGCCATTCCTAATGGACAATGTACCTTGAACAGGCTGCCACTCGCTGAAGCCGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR TCA 90 bp | GCTCTGTCCTCACCTTTGGCTGAACACGGGACCGCTAGCCACCAGGCAGGGTCTCTCTGTGCTTTTCCCTaGGAACATGGGCCCGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: ALSSPLAEHGTASHQAGSLCAFP*EHGPEN Trigger: ATTCTCGGGCCCATGTTCTCAGGGAAAAGCACAGAG...AGACCCTGCCTGGTGGCTAGCGGTCCCGTGTTCAGCCAAAGGTGAGGACAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR TCA 90 bp | GGACAGCTCTGTCCTCACCTTTGGCTGAACACGGGACCGCTAGCCACCAGGCAGGCCAGCAGTCTGGGCTaGAGACTTCTTAAAGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: GQLCPHLWLNTGPLATRQASSLG*RLLKVA Trigger: TGCTACTTTAAGAAGTCTTCAGCCCAGACTGCTGGC...CTGCCTGGTGGCTAGCGGTCCCGTGTTCAGCCAAAGGTGAGGACAGAGCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR TCA 90 bp | ATGTTTAGGCATAAATGGGGGAGCTGTGAGAGGCCTGGAGCCTTGGTGAGGGTGAGGCAAAGAGCTTCCTaGCAACCAAGGCCTCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: MFRHKWGSCERPGALVRVRQRAS*QPRPLP Trigger: CGGGAGAGGCCTTGGTTGTCAGGAAGCTCTTTGCCT...CACCCTCACCAAGGCTCCAGGCCTCTCACAGCTCCCCCATTTATGCCTAAACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR CCA 90 bp | ATGTTTAGGCATAAATGGGGGAGCTGTGAGAGGCCTGGAGCCTTGGTGAGGGTGCCGAAAGCCTTCCTCTaGAAGGTCCCATCCAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: MFRHKWGSCERPGALVRVPKAFL*KVPSSA Trigger: AGCGCTGGATGGGACCTTCCAGAGGAAGGCTTTCGG...CACCCTCACCAAGGCTCCAGGCCTCTCACAGCTCCCCCATTTATGCCTAAACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR CCA 90 bp | GCTCTGTCCTCACCTTTGGCTGAACACGGGACCGCTAGCCACCAGGCAGGGTCTTCTGAGCCAGCAGTCTaGGCTGAAGACTTCTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: ALSSPLAEHGTASHQAGSSEPAV*AEDFLK Trigger: CTTTAAGAAGTCTTCAGCCCAGACTGCTGGCTCAGA...AGACCCTGCCTGGTGGCTAGCGGTCCCGTGTTCAGCCAAAGGTGAGGACAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR TCA 90 bp | GCTGAGGTTCTGAGGAGAGAATGTTTAGGCATAAATGGGGGAGCTGTGAGAGGCGGCCCGAGAATCACCTaGATCTGCCCCCGAGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: AEVLRRECLGINGGAVRGGPRIT*ICPRVL Trigger: CAAGACTCGGGGGCAGATTCAGGTGATTCTCGGGCC...GCCTCTCACAGCTCCCCCATTTATGCCTAAACATTCTCTCCTCAGAACCTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR CCA 90 bp | GCTGAGGTTCTGAGGAGAGAATGTTTAGGCATAAATGGGGGAGCTGTGAGAGGCACCAGGCACTTGTACTaGGCGATCTGGAAGCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: AEVLRRECLGINGGAVRGTRHLY*AIWKRR Trigger: CCGGCGCTTCCAGATCGCCCAGTACAAGTGCCTGGT...GCCTCTCACAGCTCCCCCATTTATGCCTAAACATTCTCTCCTCAGAACCTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR CCA 90 bp | GGTTCTGAGGAGAGAATGTTTAGGCATAAATGGGGGAGCTGTGAGAGGCCTGGAGCGGAGCATGCAGGCTaGCAATGCGTCCATGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: GSEERMFRHKWGSCERPGAEHAG*QCVHGV Trigger: AACACCATGGACGCATTGCCAGCCTGCATGCTCCGC...TCCAGGCCTCTCACAGCTCCCCCATTTATGCCTAAACATTCTCTCCTCAGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR GCA 90 bp | AGAAGGGAACTGAAAACGGCTTCAGCGAGTGGCAGCCTGTTCAAGGTACATTGTGGTCCCATCCAGCGCTaGCACAATTACTGTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: RRELKTASASGSLFKVHCGPIQR*HNYCLA Trigger: GGCAAGACAGTAATTGTGGCAGCGCTGGATGGGACC...ACAATGTACCTTGAACAGGCTGCCACTCGCTGAAGCCGTTTTCAGTTCCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR CCA 90 bp | CTTGGTGAGGGTGGGGCTCTGAGACTGAAACCCAGCCACCAACAAGGAAGAAACTTTTCCCTGAGAACATaGGCCCGAGAATCACCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LGEGGALRLKPSHQQGRNFSLRT*ARESPE Trigger: TTCAGGTGATTCTCGGGCCCATGTTCTCAGGGAAAA...GTTTCTTCCTTGTTGGTGGCTGGGTTTCAGTCTCAGAGCCCCACCCTCACCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR GCA 90 bp | CTTGGTGAGGGTGGGGCTCTGAGACTGAAACCCAGCCACCAACAAGGAAGAAACTTCTCATCAGCTCTGTaGTTTTCCCTGAGAACATGG | + |
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Preference number: 4 (lower is better) Translates to: LGEGGALRLKPSHQQGRNFSSAL*FSLRTW Trigger: CCATGTTCTCAGGGAAAAGCACAGAGCTGATGAGAA...GTTTCTTCCTTGTTGGTGGCTGGGTTTCAGTCTCAGAGCCCCACCCTCACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR GCA 90 bp | GGTTCTGAGGAGAGAATGTTTAGGCATAAATGGGGGAGCTGTGAGAGGCCTGGACCACAATTACTGTCTTaGCCTCGTTGGCCATCATTT | + |
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Preference number: 4 (lower is better) Translates to: GSEERMFRHKWGSCERPGPQLLS*PRWPSF Trigger: AAATGATGGCCAACGAGGGCAAGACAGTAATTGTGG...TCCAGGCCTCTCACAGCTCCCCCATTTATGCCTAAACATTCTCTCCTCAGAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR CCA 90 bp | AAGAAACTAGCCCCACCAGTGTCACAATGCTGGACAGCTCTGTCCTCACCTTTGCTGTCTTGCCCTCGTTaGCCATCATTTCACAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: KKLAPPVSQCWTALSSPLLSCPR*PSFHRN Trigger: ATTTCTGTGAAATGATGGCCAACGAGGGCAAGACAG...CAAAGGTGAGGACAGAGCTGTCCAGCATTGTGACACTGGTGGGGCTAGTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS CCA 90 bp | AACTGCCCCTCATCGATGCCAATGACGGCCACACCCAAGGACTCCTaGGTCACATCGCGGAGCATGCAGGCTGGCAATGCGTCCATGGTG | + |
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Preference number: 5 (lower is better) Translates to: NCPSSMPMTATPKDS*VTSRSMQAGNASMV Trigger: CACCATGGACGCATTGCCAGCCTGCATGCTCCGCGATGTGACCCAGGAGTCCTTGGGTGTGGCCGTCATTGGCATCGATGAGGGGCAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS CCA 90 bp | TCCGCCAGGGGCACCAGGTTCAAGATGCTGCCGAAAGCCTTCCTCTaGAAGGTCCCATCCAGCGCTGCCACAATTACTGTCTTGCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: SARGTRFKMLPKAFL*KVPSSAATITVLPS Trigger: CGAGGGCAAGACAGTAATTGTGGCAGCGCTGGATGGGACCTTCCAGAGGAAGGCTTTCGGCAGCATCTTGAACCTGGTGCCCCTGGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS TCA 90 bp | TCTTCGTGTAGGCAGCTTCTCGGAAGCACTCCATGCACACAGCGGTaGGCTTCACCACACTCTCCGCCAGGGGCACCAGGTTCAAGATGC | + |
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Preference number: 5 (lower is better) Translates to: SSCRQLLGSTPCTQR*ASPHSPPGAPGSRC Trigger: GCATCTTGAACCTGGTGCCCCTGGCGGAGAGTGTGGTGAAGCTCACCGCTGTGTGCATGGAGTGCTTCCGAGAAGCTGCCTACACGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS CCA 90 bp | GGCCACACCCAAGGACTCCTGGGTCACATCGCGGAGCATGCAGGCTaGCAATGCGTCCATGGTGTTCCGATCATGTGTGGAGAAGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: GHTQGLLGHIAEHAG*QCVHGVPIMCGEAV Trigger: AACAGCTTCTCCACACATGATCGGAACACCATGGACGCATTGCCAGCCTGCATGCTCCGCGATGTGACCCAGGAGTCCTTGGGTGTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR CAA 90 bp | AGGAATGGCAGGCCCGCGCTCCCCCTGCTCTCTGAGAGTCCAACCTGGGTAGGAGCCACAATTACTGTCTaGCCCTCGTTGGCCATCATT | + |
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Preference number: 5 (lower is better) Translates to: RNGRPALPLLSESPTWVGATITV*PSLAII Trigger: AATGATGGCCAACGAGGGCAAGACAGTAATTGTGGC...TCCTACCCAGGTTGGACTCTCAGAGAGCAGGGGGAGCGCGGGCCTGCCATTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR CAA 90 bp | GCTGAACACGGGACCGCTAGCCACCAGGCAGGGTCTGGGCTCCAGTCTGCATTGGTGTCTTTGGCATACTaGATGACCAGGCACTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: AEHGTASHQAGSGLQSALVSLAY*MTRHLY Trigger: GTACAAGTGCCTGGTCATCAAGTATGCCAAAGACAC...CAATGCAGACTGGAGCCCAGACCCTGCCTGGTGGCTAGCGGTCCCGTGTTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS GCA 90 bp | ACCCAAGGACTCCTGGGTCACATCGCGGAGCATGCAGGCTGGCAATaGGTCCATGGTGTTCCGATCATGTGTGGAGAAGCTGTTGCTATA | + |
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Preference number: 5 (lower is better) Translates to: TQGLLGHIAEHAGWQ*VHGVPIMCGEAVAI Trigger: TATAGCAACAGCTTCTCCACACATGATCGGAACACCATGGACGCATTGCCAGCCTGCATGCTCCGCGATGTGACCCAGGAGTCCTTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS CCA 90 bp | GTGTCTTTGGCATACTTGATGACCAGGCACTTGTACTGGGCGATCTaGAAGCGCCGGACTCTTCTCATCAGCTCTGTGCTTTTCCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: VSLAYLMTRHLYWAI*KRRTLLISSVLFPE Trigger: CTCAGGGAAAAGCACAGAGCTGATGAGAAGAGTCCGGCGCTTCCAGATCGCCCAGTACAAGTGCCTGGTCATCAAGTATGCCAAAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR CAA 90 bp | TGGGGCTCTGAGACTGAAACCCAGCCACCAACAAGGAAGAAACTAGCCCCACCAACTGTCTTGCCCTCGTaGGCCATCATTTCACAGAAA | + |
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Preference number: 5 (lower is better) Translates to: WGSETETQPPTRKKLAPPTVLPS*AIISQK Trigger: TTTCTGTGAAATGATGGCCAACGAGGGCAAGACAGT...TGGTGGGGCTAGTTTCTTCCTTGTTGGTGGCTGGGTTTCAGTCTCAGAGCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS GCA 90 bp | CCTTCCTCTGGAAGGTCCCATCCAGCGCTGCCACAATTACTGTCTTaGCCTCGTTGGCCATCATTTCACAGAAATCCACAATGTCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: PSSGRSHPALPQLLS*PRWPSFHRNPQCQE Trigger: TTCCTGACATTGTGGATTTCTGTGAAATGATGGCCAACGAGGGCAAGACAGTAATTGTGGCAGCGCTGGATGGGACCTTCCAGAGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS-3UTR CAA 90 bp | AGAAGGGAACTGAAAACGGCTTCAGCGAGTGGCAGCCTGTTCAAGGTACATTGTACCAGACAGTTCTTGTaGTCTGAGCCAGCAGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: RRELKTASASGSLFKVHCTRQFL*SEPAVW Trigger: CCAGACTGCTGGCTCAGACAACAAGAACTGTCTGGT...ACAATGTACCTTGAACAGGCTGCCACTCGCTGAAGCCGTTTTCAGTTCCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS TCA 72 bp | AGGCAGCTTCTCGGAAGCACTCCATGCACACAGCGGTaGGCTTCACCACACTCTCCGCCAGGGGCACCAGGT | + |
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Preference number: 6 (lower is better) Translates to: RQLLGSTPCTQR*ASPHSPPGAPG Trigger: ACCTGGTGCCCCTGGCGGAGAGTGTGGTGAAGCTCACCGCTGTGTGCATGGAGTGCTTCCGAGAAGCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS GCA 72 bp | CCACACCCAAGGACTCCTGGGTCACATCGCGGAGCATaGAGGCTGGCAATGCGTCCATGGTGTTCCGATCAT | + |
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Preference number: 6 (lower is better) Translates to: PHPRTPGSHRGA*RLAMRPWCSDH Trigger: ATGATCGGAACACCATGGACGCATTGCCAGCCTGCATGCTCCGCGATGTGACCCAGGAGTCCTTGGGTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS GCA 72 bp | TCACCACACTCTCCGCCAGGGGCACCAGGTTCAAGATaGTGCCGAAAGCCTTCCTCTGGAAGGTCCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: SPHSPPGAPGSR*CRKPSSGRSHP Trigger: TGGATGGGACCTTCCAGAGGAAGGCTTTCGGCAGCATCTTGAACCTGGTGCCCCTGGCGGAGAGTGTGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS CAA 72 bp | AAGGCCTCTCCCGGCTGCCCCAGCACCAGACAGTTCTaGTTGTCTGAGCCAGCAGTCTGGGCTGAAGACTTC | + |
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Preference number: 6 (lower is better) Translates to: KASPGCPSTRQF*LSEPAVWAEDF Trigger: GAAGTCTTCAGCCCAGACTGCTGGCTCAGACAACAAGAACTGTCTGGTGCTGGGGCAGCCGGGAGAGGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS GCA 72 bp | GCAAAGAGCTTCCTGACAACCAAGGCCTCTCCCGGCTaGCCCAGCACCAGACAGTTCTTGTTGTCTGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: AKSFLTTKASPG*PSTRQFLLSEP Trigger: TGGCTCAGACAACAAGAACTGTCTGGTGCTGGGGCAGCCGGGAGAGGCCTTGGTTGTCAGGAAGCTCTTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS CCA 72 bp | CAAGGACTCCTGGGTCACATCGCGGAGCATGCAGGCTaGCAATGCGTCCATGGTGTTCCGATCATGTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: QGLLGHIAEHAG*QCVHGVPIMCG Trigger: TCCACACATGATCGGAACACCATGGACGCATTGCCAGCCTGCATGCTCCGCGATGTGACCCAGGAGTCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS TCA 72 bp | GCGCCGGACTCTTCTCATCAGCTCTGTGCTTTTCCCTaGGAACATGGGCCCGAGAATCACCTGAATCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: APDSSHQLCAFP*EHGPENHLNLP Trigger: GGGCAGATTCAGGTGATTCTCGGGCCCATGTTCTCAGGGAAAAGCACAGAGCTGATGAGAAGAGTCCGGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS CCA 72 bp | GGCACCAGGTTCAAGATGCTGCCGAAAGCCTTCCTCTaGAAGGTCCCATCCAGCGCTGCCACAATTACTGTC | + |
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Preference number: 6 (lower is better) Translates to: GTRFKMLPKAFL*KVPSSAATITV Trigger: GACAGTAATTGTGGCAGCGCTGGATGGGACCTTCCAGAGGAAGGCTTTCGGCAGCATCTTGAACCTGGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS CCA 72 bp | GCATACTTGATGACCAGGCACTTGTACTGGGCGATCTaGAAGCGCCGGACTCTTCTCATCAGCTCTGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: AYLMTRHLYWAI*KRRTLLISSVL Trigger: AAGCACAGAGCTGATGAGAAGAGTCCGGCGCTTCCAGATCGCCCAGTACAAGTGCCTGGTCATCAAGTATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS CCA 72 bp | GTGTCTTTGGCATACTTGATGACCAGGCACTTGTACTaGGCGATCTGGAAGCGCCGGACTCTTCTCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: VSLAYLMTRHLY*AIWKRRTLLIS Trigger: GCTGATGAGAAGAGTCCGGCGCTTCCAGATCGCCCAGTACAAGTGCCTGGTCATCAAGTATGCCAAAGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS CCA 72 bp | AGGCTGGCAATGCGTCCATGGTGTTCCGATCATGTGTaGAGAAGCTGTTGCTATAGCGCGTGTCTTTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: RLAMRPWCSDHV*RSCCYSACLWH Trigger: ATGCCAAAGACACGCGCTATAGCAACAGCTTCTCCACACATGATCGGAACACCATGGACGCATTGCCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS CAA 90 bp | GCCTTCCTCTGGAAGGTCCCATCCAGCGCTGCCACAATTACTGTCTaGCCCTCGTTGGCCATCATTTCACAGAAATCCACAATGTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: AFLWKVPSSAATITV*PSLAIISQKSTMSG Trigger: TCCTGACATTGTGGATTTCTGTGAAATGATGGCCAACGAGGGCAAGACAGTAATTGTGGCAGCGCTGGATGGGACCTTCCAGAGGAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS GCA 72 bp | GGAAGGTCCCATCCAGCGCTGCCACAATTACTGTCTTaGCCTCGTTGGCCATCATTTCACAGAAATCCACAA | + |
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Preference number: 6 (lower is better) Translates to: GRSHPALPQLLS*PRWPSFHRNPQ Trigger: TTGTGGATTTCTGTGAAATGATGGCCAACGAGGGCAAGACAGTAATTGTGGCAGCGCTGGATGGGACCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS CAA 72 bp | TGGAAGGTCCCATCCAGCGCTGCCACAATTACTGTCTaGCCCTCGTTGGCCATCATTTCACAGAAATCCACA | + |
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Preference number: 6 (lower is better) Translates to: WKVPSSAATITV*PSLAIISQKST Trigger: TGTGGATTTCTGTGAAATGATGGCCAACGAGGGCAAGACAGTAATTGTGGCAGCGCTGGATGGGACCTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS CAA 72 bp | CCATCCAGCGCTGCCACAATTACTGTCTTGCCCTCGTaGGCCATCATTTCACAGAAATCCACAATGTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: PSSAATITVLPS*AIISQKSTMSG Trigger: TCCTGACATTGTGGATTTCTGTGAAATGATGGCCAACGAGGGCAAGACAGTAATTGTGGCAGCGCTGGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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| CDS CCA 72 bp | CATCCAGCGCTGCCACAATTACTGTCTTGCCCTCGTTaGCCATCATTTCACAGAAATCCACAATGTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: HPALPQLLSCPR*PSFHRNPQCQE Trigger: TTCCTGACATTGTGGATTTCTGTGAAATGATGGCCAACGAGGGCAAGACAGTAATTGTGGCAGCGCTGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026661.4 |
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