Pregenerated sensors for TIRAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032041Ensembl transcript IDs: ENSMUST00000175765.8, ENSMUST00000176021.8, ENSMUST00000176531.8, ENSMUST00000176611.2, ENSMUST00000176685.8, ENSMUST00000177129.8
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCTGACCTTCCCGATAGCACAGTCCCTTGACAACTCGAATTTCTaGCTTCCTCGTTGTCTTCCTGGGGGAGTCCCTGGCTTCCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: LLTFPIAQSLDNSNF*LPRCLPGGVPGFLL Trigger: CAGGAGGAAGCCAGGGACTCCCCCAGGAAGACAACGAGGAAGTCAGAAATTCGAGTTGTCAAGGGACTGTGCTATCGGGAAGGTCAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR TCA 90 bp | CAGCGCAGAGGGGACACTGCTGACCTTCCCGATAGCACAGTCCCTTaGCAACTCGAATTTCTGACTTCCTCGTTGTCTTCCTGGGGGAGT | + |
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Preference number: 1 (lower is better) Translates to: QRRGDTADLPDSTVP*QLEFLTSSLSSWGS Trigger: ACTCCCCCAGGAAGACAACGAGGAAGTCAGAAATTCGAGTTGTCAAGGGACTGTGCTATCGGGAAGGTCAGCAGTGTCCCCTCTGCGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR TCA 90 bp | TCGGGTTCACCCCTCTTGAGGAGTGGTATCCATTTCCCCCGTGCCTaGTGCCAGAGGAAGAAGACAGCCATGTATCAGCTTCCTATCCAG | + |
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Preference number: 1 (lower is better) Translates to: SGSPLLRSGIHFPRA*CQRKKTAMYQLPIQ Trigger: CTGGATAGGAAGCTGATACATGGCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTCCTCAAGAGGGGTGAACCCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR GCA 90 bp | TCAATCGGGTTCACCCCTCTTGAGGAGTGGTATCCATTTCCCCCGTaGCTGATGCCAGAGGAAGAAGACAGCCATGTATCAGCTTCCTAT | + |
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Preference number: 1 (lower is better) Translates to: SIGFTPLEEWYPFPP*LMPEEEDSHVSASY Trigger: ATAGGAAGCTGATACATGGCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTCCTCAAGAGGGGTGAACCCGATTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR CCA 90 bp | ACCACCGCCTGGCTCACCCTGGCTTTCCTTCTTCTTACCTGTTTCTaGATACAGAGCAGCTGCCAGGTTTGTGTTTTCTCCTTTGTTTTG | + |
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Preference number: 1 (lower is better) Translates to: TTAWLTLAFLLLTCF*IQSSCQVCVFSFVL Trigger: CAAAACAAAGGAGAAAACACAAACCTGGCAGCTGCTCTGTATCCAGAAACAGGTAAGAAGAAGGAAAGCCAGGGTGAGCCAGGCGGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| 3UTR TCA 90 bp | GGGTGGAGAACTGCTGACCGACACAAACAAAAGAAAATCCGCGAGTaGCACAGCAACGGCGACACACCTTGTAAACATGTCAAACAAAGG | + |
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Preference number: 1 (lower is better) Translates to: GWRTADRHKQKKIRE*HSNGDTPCKHVKQR Trigger: CCTTTGTTTGACATGTTTACAAGGTGTGTCGCCGTTGCTGTGTCACTCGCGGATTTTCTTTTGTTTGTGTCGGTCAGCAGTTCTCCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
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| 3UTR GCA 90 bp | GGGAAGAGTTTCAGTAGTGTGTGTGTGTGTGAAGGACTGGATACTTaGCACCTCTTCTCAGCTTCCCTAGGCAACTTCTGGCTCATCAAT | + |
|
Preference number: 1 (lower is better) Translates to: GKSFSSVCVCEGLDT*HLFSASLGNFWLIN Trigger: ATTGATGAGCCAGAAGTTGCCTAGGGAAGCTGAGAAGAGGTGGCAAGTATCCAGTCCTTCACACACACACACACTACTGAAACTCTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR CCA 90 bp | TATGATTGTTTTGCCTGCATCTATGGAGGTGTTCACGTGTGTACCTaGTGCTCAAGGAGGTCTTGGTCAGAGAAGACATCAGATCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: YDCFACIYGGVHVCT*CSRRSWSEKTSDPL Trigger: CAGGGGATCTGATGTCTTCTCTGACCAAGACCTCCTTGAGCACCAGGTACACACGTGAACACCTCCATAGATGCAGGCAAAACAATCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| 3UTR GCA 90 bp | ACCCTGGCTTTCCTTCTTCTTACCTGTTTCTGGATACAGAGCAGCTaGCAGGTTTGTGTTTTCTCCTTTGTTTTGGTGGTGCTGGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: TLAFLLLTCFWIQSS*QVCVFSFVLVVLEV Trigger: TACCTCCAGCACCACCAAAACAAAGGAGAAAACACAAACCTGGCAGCTGCTCTGTATCCAGAAACAGGTAAGAAGAAGGAAAGCCAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| 3UTR CCA 90 bp | AGGGCGTCAGATCTCATTATGGGTGGTTGTGAGCCACCATGTATGTaGTTGCTGGTATTTGAACTCAGGACCTTTGGAAAAGCAGTCAGT | + |
|
Preference number: 1 (lower is better) Translates to: RASDLIMGGCEPPCM*LLVFELRTFGKAVS Trigger: ACTGACTGCTTTTCCAAAGGTCCTGAGTTCAAATACCAGCAACCACATACATGGTGGCTCACAACCACCCATAATGAGATCTGACGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
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| 3UTR CCA 90 bp | GTAGCTGACTTCAAATGCACCAGAAGAGGGCGTCAGATCTCATTATaGGTGGTTGTGAGCCACCATGTATGTGGTTGCTGGTATTTGAAC | + |
|
Preference number: 1 (lower is better) Translates to: VADFKCTRRGRQISL*VVVSHHVCGCWYLN Trigger: GTTCAAATACCAGCAACCACATACATGGTGGCTCACAACCACCCATAATGAGATCTGACGCCCTCTTCTGGTGCATTTGAAGTCAGCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
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| 3UTR GCA 90 bp | CGTCAGATCTCATTATGGGTGGTTGTGAGCCACCATGTATGTGGTTaGTGGTATTTGAACTCAGGACCTTTGGAAAAGCAGTCAGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: RQISLWVVVSHHVCG*WYLNSGPLEKQSVF Trigger: GAACACTGACTGCTTTTCCAAAGGTCCTGAGTTCAAATACCAGCAACCACATACATGGTGGCTCACAACCACCCATAATGAGATCTGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
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| 3UTR CCA 90 bp | CAGATCTCATTATGGGTGGTTGTGAGCCACCATGTATGTGGTTGCTaGTATTTGAACTCAGGACCTTTGGAAAAGCAGTCAGTGTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: QISLWVVVSHHVCGC*YLNSGPLEKQSVFL Trigger: TAAGAACACTGACTGCTTTTCCAAAGGTCCTGAGTTCAAATACCAGCAACCACATACATGGTGGCTCACAACCACCCATAATGAGATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
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| 3UTR TCA 90 bp | GCAAGCCTACCACGGACTCCATCTAGAGTCCTAGGTTTGCACTTCTaGTGTAAAAAGGAAGATTTCTTTATGTGTATGATTGTTTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: ASLPRTPSRVLGLHF*CKKEDFFMCMIVLP Trigger: AGGCAAAACAATCATACACATAAAGAAATCTTCCTTTTTACATCAGAAGTGCAAACCTAGGACTCTAGATGGAGTCCGTGGTAGGCTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| 3UTR GCA 90 bp | GATTTATTTATTATTACACATAAGTACACTGTAGCTGACTTCAAATaGACCAGAAGAGGGCGTCAGATCTCATTATGGGTGGTTGTGAGC | + |
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Preference number: 1 (lower is better) Translates to: DLFIITHKYTVADFK*TRRGRQISLWVVVS Trigger: GCTCACAACCACCCATAATGAGATCTGACGCCCTCTTCTGGTGCATTTGAAGTCAGCTACAGTGTACTTATGTGTAATAATAAATAAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCAGCGCAGAGGGGACACTGCTGACCTTCCCGATAGCACAGTCCCTTGACTCCCCATCTTCTTCCTaGTCTCCTTGCGGGGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: QFSAEGTLLTFPIAQSLDSPSSS*SPCGGG Trigger: ACCACCCCCGCAAGGAGACCAGGAAGAAGATGGGGA...GTCAAGGGACTGTGCTATCGGGAAGGTCAGCAGTGTCCCCTCTGCGCTGAACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCAGCGCAGAGGGGACACTGCTGACCTTCCCGATAGCACAGTCCCTTGACTCCTCGTTGTCTTCCTaGGGGAGTCCCTGGCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: QFSAEGTLLTFPIAQSLDSSLSS*GSPWLP Trigger: AGGAAGCCAGGGACTCCCCCAGGAAGACAACGAGGA...GTCAAGGGACTGTGCTATCGGGAAGGTCAGCAGTGTCCCCTCTGCGCTGAACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCAGCGCAGAGGGGACACTGCTGACCTTCCCGATAGCACAGTCCCTTGACGGGTGCAGCTGGCTCTaGCTCTGCTGTATATACTGG | + |
|
Preference number: 2 (lower is better) Translates to: QFSAEGTLLTFPIAQSLDGCSWL*LCCIYW Trigger: CCAGTATATACAGCAGAGCCAGAGCCAGCTGCACCC...GTCAAGGGACTGTGCTATCGGGAAGGTCAGCAGTGTCCCCTCTGCGCTGAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGGAGTGGTATCCATTTCCCCCGTGCCTGATGCCAGAGGAAGAAGACAGCTCCTGGGGGAGTCCCTaGCTTCCTCCTGCCCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LEEWYPFPPCLMPEEEDSSWGSP*LPPALL Trigger: AAGAAGGGCAGGAGGAAGCCAGGGACTCCCCCAGGA...GCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTCCTCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGGAGTGGTATCCATTTCCCCCGTGCCTGATGCCAGAGGAAGAAGACAGCTCCCCATCTTCTTCCTaGTCTCCTTGCGGGGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LEEWYPFPPCLMPEEEDSSPSSS*SPCGGG Trigger: ACCACCCCCGCAAGGAGACCAGGAAGAAGATGGGGA...GCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTCCTCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR CAA 90 bp | AAAGCCAGATGCCGTGAAGCACAGGCTCTCTTGAAGCATGGGCTCTaGGGCTCTTTCAGATGTCTGAGGAGGCCCCTGGGTCACATGATC | + |
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Preference number: 2 (lower is better) Translates to: KARCREAQALLKHGL*GSFRCLRRPLGHMI Trigger: GATCATGTGACCCAGGGGCCTCCTCAGACATCTGAAAGAGCCCAAGAGCCCATGCTTCAAGAGAGCCTGTGCTTCACGGCATCTGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGGAGTGGTATCCATTTCCCCCGTGCCTGATGCCAGAGGAAGAAGACAGCGGGTGCAGCTGGCTCTaGCTCTGCTGTATATACTGG | + |
|
Preference number: 2 (lower is better) Translates to: LEEWYPFPPCLMPEEEDSGCSWL*LCCIYW Trigger: CCAGTATATACAGCAGAGCCAGAGCCAGCTGCACCC...GCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTCCTCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR CCA 90 bp | CTGATGCCAGAGGAAGAAGACAGCCATGTATCAGCTTCCTATCCAGTTCAGCGCTCCTGGGGGAGTCCCTaGCTTCCTCCTGCCCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LMPEEEDSHVSASYPVQRSWGSP*LPPALL Trigger: AAGAAGGGCAGGAGGAAGCCAGGGACTCCCCCAGGA...GCGCTGAACTGGATAGGAAGCTGATACATGGCTGTCTTCTTCCTCTGGCATCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR CAA 90 bp | CTCACAGTTCAACACAAAGCCAGATGCCGTGAAGCACAGGCTCTCTaGAAGCATGGGCTCTTGGGCTCTTTCAGATGTCTGAGGAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: LTVQHKARCREAQAL*KHGLLGSFRCLRRP Trigger: GGGCCTCCTCAGACATCTGAAAGAGCCCAAGAGCCCATGCTTCAAGAGAGCCTGTGCTTCACGGCATCTGGCTTTGTGTTGAACTGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
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| 3UTR-3UTR CCA 90 bp | GGACTGGATACTTGCCACCTCTTCTCAGCTTCCCTAGGCAACTTCTGGCTCATCTCCTCCTGCCCTTCTTaGGGAGTCCCCATCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: GLDTCHLFSASLGNFWLISSCPS*GVPIFF Trigger: GAAGAAGATGGGGACTCCCCAAGAAGGGCAGGAGGA...GATGAGCCAGAAGTTGCCTAGGGAAGCTGAGAAGAGGTGGCAAGTATCCAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTGGTATCCATTTCCCCCGTGCCTGATGCCAGAGGAAGAAGACAGCCATGTATCCTCCTGCCCTTCTTaGGGAGTCCCCATCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: EWYPFPPCLMPEEEDSHVSSCPS*GVPIFF Trigger: GAAGAAGATGGGGACTCCCCAAGAAGGGCAGGAGGA...TACATGGCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR CCA 90 bp | CTATGGAGGTGTTCACGTGTGTACCTGGTGCTCAAGGAGGTCTTGGTCAGAGAATCCTCGTTGTCTTCCTaGGGGAGTCCCTGGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LWRCSRVYLVLKEVLVRESSLSS*GSPWLP Trigger: AGGAAGCCAGGGACTCCCCCAGGAAGACAACGAGGA...TTCTCTGACCAAGACCTCCTTGAGCACCAGGTACACACGTGAACACCTCCATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGACAAGGACATTCAGCTGGCCATGTTTCTGTTCTTATTCGAACACAGGTGGTCCTGGGGGAGTCCCTaGCTTCCTCCTGCCCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: GDKDIQLAMFLFLFEHRWSWGSP*LPPALL Trigger: AAGAAGGGCAGGAGGAAGCCAGGGACTCCCCCAGGA...CCACCTGTGTTCGAATAAGAACAGAAACATGGCCAGCTGAATGTCCTTGTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCTTTGTTTTGGTGGTGCTGGAGGTAGAATCCAAGCCCTCAGGTATGCTATCCTGGGGGAGTCCCTaGCTTCCTCCTGCCCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: FSFVLVVLEVESKPSGMLSWGSP*LPPALL Trigger: AAGAAGGGCAGGAGGAAGCCAGGGACTCCCCCAGGA...TAGCATACCTGAGGGCTTGGATTCTACCTCCAGCACCACCAAAACAAAGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTATCAGCTTCCTATCCAGTTCAGCGCAGAGGGGACACTGCTGACCTTCCCGAAGCTGGTGACGATCTaGTCCTGTGTCATAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: MYQLPIQFSAEGTLLTFPKLVTI*SCVINR Trigger: CCTGTTTATGACACAGGATCAGATCGTCACCAGCTT...CGGGAAGGTCAGCAGTGTCCCCTCTGCGCTGAACTGGATAGGAAGCTGATACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGGAGTGGTATCCATTTCCCCCGTGCCTGATGCCAGAGGAAGAAGACAGCAAGCTGGTGACGATCTaGTCCTGTGTCATAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: LEEWYPFPPCLMPEEEDSKLVTI*SCVINR Trigger: CCTGTTTATGACACAGGATCAGATCGTCACCAGCTT...GCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTCCTCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGGAGTGGTATCCATTTCCCCCGTGCCTGATGCCAGAGGAAGAAGACAGCGACAACTCGAATTTCTaGCTTCCTCGTTGTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LEEWYPFPPCLMPEEEDSDNSNF*LPRCLP Trigger: AGGAAGACAACGAGGAAGTCAGAAATTCGAGTTGTC...GCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTCCTCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCAGTTCAGCGCAGAGGGGACACTGCTGACCTTCCCGATAGCACAGTCCCTTTACTGGATTAATGACTaGTGTGAGCTATTCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: IQFSAEGTLLTFPIAQSLYWIND*CELFPA Trigger: AGCTGGGAATAGCTCACAGCAGTCATTAATCCAGTA...AAGGGACTGTGCTATCGGGAAGGTCAGCAGTGTCCCCTCTGCGCTGAACTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCCTGGAACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCTATGATTGTTTTGCCTaGATCTATGGAGGTGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: AVLELCRPGWPRTQKSACYDCFA*IYGGVH Trigger: GTGAACACCTCCATAGATGCAGGCAAAACAATCATA...GCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTTCCAGGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR CCA 90 bp | CCTATCCAGTTCAGCGCAGAGGGGACACTGCTGACCTTCCCGATAGCACAGTCCCTCTGCTGTATATACTaGATTAATGACTGCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: PIQFSAEGTLLTFPIAQSLCCIY*INDCCE Trigger: CTCACAGCAGTCATTAATCCAGTATATACAGCAGAG...GGACTGTGCTATCGGGAAGGTCAGCAGTGTCCCCTCTGCGCTGAACTGGATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGTGAAAGGGTCATTCCACCGTAAAGGGTGGAGAACTGCTGACCGACACAAATTATTCGAACACAGGTaGCCCCTTGTCTCTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LVKGSFHRKGWRTADRHKLFEHR*PLVSPW Trigger: CCAGGGAGAGACAAGGGGCCACCTGTGTTCGAATAA...TTTGTGTCGGTCAGCAGTTCTCCACCCTTTACGGTGGAATGACCCTTTCACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
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| 3UTR-3UTR TCA 90 bp | CTATGGAGGTGTTCACGTGTGTACCTGGTGCTCAAGGAGGTCTTGGTCAGAGAAAAGCTGGTGACGATCTaGTCCTGTGTCATAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: LWRCSRVYLVLKEVLVREKLVTI*SCVINR Trigger: CCTGTTTATGACACAGGATCAGATCGTCACCAGCTT...TTCTCTGACCAAGACCTCCTTGAGCACCAGGTACACACGTGAACACCTCCATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCTGGAGGTAGAATCCAAGCCCTCAGGTATGCTAAGCAAGCCTACCACGGACTACTGGATTAATGACTaGTGTGAGCTATTCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: VLEVESKPSGMLSKPTTDYWIND*CELFPA Trigger: AGCTGGGAATAGCTCACAGCAGTCATTAATCCAGTA...GTCCGTGGTAGGCTTGCTTAGCATACCTGAGGGCTTGGATTCTACCTCCAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| 3UTR CAA 90 bp | TTCTGGATACAGAGCAGCTGCCAGGTTTGTGTTTTCTCCTTTGTTTaGGTGGTGCTGGAGGTAGAATCCAAGCCCTCAGGTATGCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: FWIQSSCQVCVFSFV*VVLEVESKPSGMLS Trigger: GCTTAGCATACCTGAGGGCTTGGATTCTACCTCCAGCACCACCAAAACAAAGGAGAAAACACAAACCTGGCAGCTGCTCTGTATCCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| 3UTR CAA 90 bp | GTGAGCCACCATGTATGTGGTTGCTGGTATTTGAACTCAGGACCTTaGGAAAAGCAGTCAGTGTTCTTACCCGCTGAACCATCTTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: VSHHVCGCWYLNSGP*EKQSVFLPAEPSCQ Trigger: CTGGCAAGATGGTTCAGCGGGTAAGAACACTGACTGCTTTTCCAAAGGTCCTGAGTTCAAATACCAGCAACCACATACATGGTGGCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTGGTATCCATTTCCCCCGTGCCTGATGCCAGAGGAAGAAGACAGCCATGTATACTGGATTAATGACTaGTGTGAGCTATTCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: EWYPFPPCLMPEEEDSHVYWIND*CELFPA Trigger: AGCTGGGAATAGCTCACAGCAGTCATTAATCCAGTA...TACATGGCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR-3UTR CCA 90 bp | GGACTGGATACTTGCCACCTCTTCTCAGCTTCCCTAGGCAACTTCTGGCTCATCCTCTGCTGTATATACTaGATTAATGACTGCTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GLDTCHLFSASLGNFWLILCCIY*INDCCE Trigger: CTCACAGCAGTCATTAATCCAGTATATACAGCAGAG...GATGAGCCAGAAGTTGCCTAGGGAAGCTGAGAAGAGGTGGCAAGTATCCAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| 3UTR CAA 90 bp | GCGTCAGATCTCATTATGGGTGGTTGTGAGCCACCATGTATGTGGTaGCTGGTATTTGAACTCAGGACCTTTGGAAAAGCAGTCAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: ASDLIMGGCEPPCMW*LVFELRTFGKAVSV Trigger: AACACTGACTGCTTTTCCAAAGGTCCTGAGTTCAAATACCAGCAACCACATACATGGTGGCTCACAACCACCCATAATGAGATCTGACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR-3UTR TCA 90 bp | GAACAAGAAGAGTGGGGAGAACTGGCTCACAGGGCATTAAAGCTTTATAAAAGAATCCGGCAAGCTGAATaGGAAGGACGTCAAGTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: EQEEWGELAHRALKLYKRIRQAE*EGRQVW Trigger: CCAAACTTGACGTCCTTCTCATTCAGCTTGCCGGAT...TCTTTTATAAAGCTTTAATGCCCTGTGAGCCAGTTCTCCCCACTCTTCTTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR CAA 90 bp | TTTCCTTCTTCTTACCTGTTTCTGGATACAGAGCAGCTGCCAGGTTaGTGTTTTCTCCTTTGTTTTGGTGGTGCTGGAGGTAGAATCCAA | + |
|
Preference number: 2 (lower is better) Translates to: FPSSYLFLDTEQLPG*CFLLCFGGAGGRIQ Trigger: TTGGATTCTACCTCCAGCACCACCAAAACAAAGGAGAAAACACAAACCTGGCAGCTGCTCTGTATCCAGAAACAGGTAAGAAGAAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| 3UTR-3UTR TCA 90 bp | GAACAAGAAGAGTGGGGAGAACTGGCTCACAGGGCATTAAAGCTTTATAAAAGAAACACAGGGTATACTTaGAAGAGACTAGAGACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: EQEEWGELAHRALKLYKRNTGYT*KRLETQ Trigger: CTGGGTCTCTAGTCTCTTTCAAGTATACCCTGTGTT...TCTTTTATAAAGCTTTAATGCCCTGTGAGCCAGTTCTCCCCACTCTTCTTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR-3UTR TCA 90 bp | GATTTCTTTATGTGTATGATTGTTTTGCCTGCATCTATGGAGGTGTTCACGTGTAAGCTGGTGACGATCTaGTCCTGTGTCATAAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: DFFMCMIVLPASMEVFTCKLVTI*SCVINR Trigger: CCTGTTTATGACACAGGATCAGATCGTCACCAGCTT...ACACGTGAACACCTCCATAGATGCAGGCAAAACAATCATACACATAAAGAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| 3UTR-3UTR TCA 90 bp | GATTTCTTTATGTGTATGATTGTTTTGCCTGCATCTATGGAGGTGTTCACGTGTTGTCTTCCAGTTTTGTaGGGTGAGTTGACATCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: DFFMCMIVLPASMEVFTCCLPVL*GELTSL Trigger: CAGAGATGTCAACTCACCTCACAAAACTGGAAGACA...ACACGTGAACACCTCCATAGATGCAGGCAAAACAATCATACACATAAAGAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCTGCTCGCTCCGGCCCAAAGATTTATTTATTATTACACATAAGTACACTGTACTCTGCTGTATATACTaGATTAATGACTGCTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: PCSLRPKDLFIITHKYTVLCCIY*INDCCE Trigger: CTCACAGCAGTCATTAATCCAGTATATACAGCAGAG...TACAGTGTACTTATGTGTAATAATAAATAAATCTTTGGGCCGGAGCGAGCAGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR CCA 72 bp | GGAGTCCCCATCTTCTTCCTGGTCTCCTTGCGGGGGTaGTTCCCATCTTCAGCCTGGCCATCTTGTGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GVPIFFLVSLRG*FPSSAWPSCGP Trigger: GGGCCCACAAGATGGCCAGGCTGAAGATGGGAACCACCCCCGCAAGGAGACCAGGAAGAAGATGGGGACTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| 3UTR-3UTR CAA 90 bp | GACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCAATGCCTCCCGAGTGCTGTTCTTCCTGGTCTCCTaGCGGGGGTGGTTCCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: DQAGLELRNPPANASRVLFFLVS*RGWFPS Trigger: AGATGGGAACCACCCCCGCAAGGAGACCAGGAAGAA...CAGCACTCGGGAGGCATTGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| 3UTR GCA 72 bp | TGCCAATGCCTCCCGAGTGCTGGGATTAAAGGCGTGTaGCACCACCGCCTGGCTCACCCTGGCTTTCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: CQCLPSAGIKGV*HHRLAHPGFPS Trigger: AGAAGGAAAGCCAGGGTGAGCCAGGCGGTGGTGGCACACGCCTTTAATCCCAGCACTCGGGAGGCATTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCAATaGCTCCCGAGTGCTGGGATTAAAGGCGTGTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGWPRTQKSACQ*LPSAGIKGVCH Trigger: GTGGCACACGCCTTTAATCCCAGCACTCGGGAGGCATTGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| 3UTR GCA 72 bp | TGGCTGCGCTGGTGCCCACCTCTAACCCCAGCTCTGTaGTGGGGTGGCAGAGGCAGACAAATCTCTGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: WLRWCPPLTPAL*WGGRGRQISEF Trigger: AAACTCAGAGATTTGTCTGCCTCTGCCACCCCAGCACAGAGCTGGGGTTAGAGGTGGGCACCAGCGCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTATCCAGTTCAGCGCAGAGGGGACACTGCTGACCTTCCCGATAGCACAGTCCTTCTTCCTGGTCTCCTaGCGGGGGTGGTTCCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: PIQFSAEGTLLTFPIAQSFFLVS*RGWFPS Trigger: AGATGGGAACCACCCCCGCAAGGAGACCAGGAAGAA...GGACTGTGCTATCGGGAAGGTCAGCAGTGTCCCCTCTGCGCTGAACTGGATAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCAATGCCTCCCGAGTGCTGGGATTAAAGGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*QCLPSAGIKGV Trigger: CACGCCTTTAATCCCAGCACTCGGGAGGCATTGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTCCTGGAACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCTCGGGTTCACCCCTCTaGAGGAGTGGTATCCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: AVLELCRPGWPRTQKSACSGSPL*RSGIHF Trigger: GAAATGGATACCACTCCTCAAGAGGGGTGAACCCGA...GCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTTCCAGGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| 3UTR TCA 72 bp | CCGGTTCCTCACAGTTCAACACAAAGCCAGATGCCGTaGAGCACAGGCTCTCTTGAAGCATGGGCTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PVPHSSTQSQMP*STGSLEAWALG Trigger: CCCAAGAGCCCATGCTTCAAGAGAGCCTGTGCTTCACGGCATCTGGCTTTGTGTTGAACTGTGAGGAACCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR TCA 72 bp | CCCCTCTTGAGGAGTGGTATCCATTTCCCCCGTGCCTaGTGCCAGAGGAAGAAGACAGCCATGTATCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PLLRSGIHFPRA*CQRKKTAMYQL Trigger: AAGCTGATACATGGCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTCCTCAAGAGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| 3UTR CCA 72 bp | GGTGTTCACGTGTGTACCTGGTGCTCAAGGAGGTCTTaGTCAGAGAAGACATCAGATCCCCTGGAAGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GVHVCTWCSRRS*SEKTSDPLEAE Trigger: CTCTGCTTCCAGGGGATCTGATGTCTTCTCTGACCAAGACCTCCTTGAGCACCAGGTACACACGTGAACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| 3UTR GCA 72 bp | TTCACCCCTCTTGAGGAGTGGTATCCATTTCCCCCGTaGCTGATGCCAGAGGAAGAAGACAGCCATGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: FTPLEEWYPFPP*LMPEEEDSHVS Trigger: TGATACATGGCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTCCTCAAGAGGGGTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| 3UTR CCA 72 bp | CAGCTGGCCATGTTTCTGTTCTTATTCGAACACAGGTaGCCCCTTGTCTCTCCCTGGGGATATACTCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QLAMFLFLFEHR*PLVSPWGYTLV Trigger: CACCAGAGTATATCCCCAGGGAGAGACAAGGGGCCACCTGTGTTCGAATAAGAACAGAAACATGGCCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR GCA 72 bp | GCCTGCATCTATGGAGGTGTTCACGTGTGTACCTGGTaGTCAAGGAGGTCTTGGTCAGAGAAGACATCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: ACIYGGVHVCTW*SRRSWSEKTSD Trigger: ATCTGATGTCTTCTCTGACCAAGACCTCCTTGAGCACCAGGTACACACGTGAACACCTCCATAGATGCAGGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| 3UTR GCA 72 bp | TTCAGTAGTGTGTGTGTGTGTGAAGGACTGGATACTTaGCACCTCTTCTCAGCTTCCCTAGGCAACTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FSSVCVCEGLDT*HLFSASLGNFW Trigger: CCAGAAGTTGCCTAGGGAAGCTGAGAAGAGGTGGCAAGTATCCAGTCCTTCACACACACACACACTACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR CCA 72 bp | TTTGCCTGCATCTATGGAGGTGTTCACGTGTGTACCTaGTGCTCAAGGAGGTCTTGGTCAGAGAAGACATCA | + |
|
Preference number: 3 (lower is better) Translates to: FACIYGGVHVCT*CSRRSWSEKTS Trigger: TGATGTCTTCTCTGACCAAGACCTCCTTGAGCACCAGGTACACACGTGAACACCTCCATAGATGCAGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| 3UTR TCA 72 bp | ACTGCTGACCGACACAAACAAAAGAAAATCCGCGAGTaGCACAGCAACGGCGACACACCTTGTAAACATGTC | + |
|
Preference number: 3 (lower is better) Translates to: TADRHKQKKIRE*HSNGDTPCKHV Trigger: GACATGTTTACAAGGTGTGTCGCCGTTGCTGTGTCACTCGCGGATTTTCTTTTGTTTGTGTCGGTCAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR CCA 72 bp | ACAGGGTGCAGCTGGCTCTGGCTCTGCTGTATATACTaGATTAATGACTGCTGTGAGCTATTCCCAGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TGCSWLWLCCIY*INDCCELFPAF Trigger: AAAAGCTGGGAATAGCTCACAGCAGTCATTAATCCAGTATATACAGCAGAGCCAGAGCCAGCTGCACCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| 3UTR CCA 72 bp | TCAAGGTACATACCAGGGGAGACAAGGACATTCAGCTaGCCATGTTTCTGTTCTTATTCGAACACAGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SRYIPGETRTFS*PCFCSYSNTGG Trigger: GCCACCTGTGTTCGAATAAGAACAGAAACATGGCCAGCTGAATGTCCTTGTCTCCCCTGGTATGTACCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR CCA 72 bp | TGCGCCCTTGTGAAAGGGTCATTCCACCGTAAAGGGTaGAGAACTGCTGACCGACACAAACAAAAGAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: CALVKGSFHRKG*RTADRHKQKKI Trigger: GATTTTCTTTTGTTTGTGTCGGTCAGCAGTTCTCCACCCTTTACGGTGGAATGACCCTTTCACAAGGGCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR TCA 72 bp | GATAAGGTTGGGAGTCACCATGTGGATCCTGGGAATTaGACCTGGATCCTCTGGAAAAGCAACAAGAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DKVGSHHVDPGN*TWILWKSNKSS Trigger: AGAACTCTTGTTGCTTTTCCAGAGGATCCAGGTTCAATTCCCAGGATCCACATGGTGACTCCCAACCTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| 3UTR GCA 72 bp | TCATTATGGGTGGTTGTGAGCCACCATGTATGTGGTTaGTGGTATTTGAACTCAGGACCTTTGGAAAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLWVVVSHHVCG*WYLNSGPLEKQ Trigger: CTGCTTTTCCAAAGGTCCTGAGTTCAAATACCAGCAACCACATACATGGTGGCTCACAACCACCCATAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR CCA 72 bp | TTATGGGTGGTTGTGAGCCACCATGTATGTGGTTGCTaGTATTTGAACTCAGGACCTTTGGAAAAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LWVVVSHHVCGC*YLNSGPLEKQS Trigger: TGACTGCTTTTCCAAAGGTCCTGAGTTCAAATACCAGCAACCACATACATGGTGGCTCACAACCACCCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR GCA 72 bp | TGGCTCTGGCTCTGCTGTATATACTGGATTAATGACTaGTGTGAGCTATTCCCAGCTTTTCTTATGAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: WLWLCCIYWIND*CELFPAFLMKA Trigger: GGCTTTCATAAGAAAAGCTGGGAATAGCTCACAGCAGTCATTAATCCAGTATATACAGCAGAGCCAGAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| 3UTR CCA 72 bp | GATCTCATTATGGGTGGTTGTGAGCCACCATGTATGTaGTTGCTGGTATTTGAACTCAGGACCTTTGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: DLIMGGCEPPCM*LLVFELRTFGK Trigger: TTTTCCAAAGGTCCTGAGTTCAAATACCAGCAACCACATACATGGTGGCTCACAACCACCCATAATGAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR TCA 72 bp | CAGCCCCCTACTGTTATGAATCTTAATGTAAATATCTaGTATGGAGGCTATCTGACATGCGCCCTTGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QPPTVMNLNVNI*YGGYLTCALVK Trigger: TTTCACAAGGGCGCATGTCAGATAGCCTCCATATCAGATATTTACATTAAGATTCATAACAGTAGGGGGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR GCA 72 bp | ATTATTACACATAAGTACACTGTAGCTGACTTCAAATaGACCAGAAGAGGGCGTCAGATCTCATTATGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: IITHKYTVADFK*TRRGRQISLWV Trigger: CACCCATAATGAGATCTGACGCCCTCTTCTGGTGCATTTGAAGTCAGCTACAGTGTACTTATGTGTAATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR CCA 72 bp | AAGAATTACGACAGTGATTTCAATGAACAAGAAGAGTaGGGAGAACTGGCTCACAGGGCATTAAAGCTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: KNYDSDFNEQEE*GELAHRALKLY Trigger: ATAAAGCTTTAATGCCCTGTGAGCCAGTTCTCCCCACTCTTCTTGTTCATTGAAATCACTGTCGTAATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| 3UTR TCA 72 bp | ACTTCTGATGTAAAAAGGAAGATTTCTTTATGTGTATaGTTGTTTTGCCTGCATCTATGGAGGTGTTCACGT | + |
|
Preference number: 3 (lower is better) Translates to: TSDVKRKISLCV*LFCLHLWRCSR Trigger: ACGTGAACACCTCCATAGATGCAGGCAAAACAATCATACACATAAAGAAATCTTCCTTTTTACATCAGAAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| CDS-3UTR GCA 90 bp | GACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCAATGCCTCCCGAGTGCTGTCCAGCGGCCACTGCTaGTGCTGCTGCTGTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: DQAGLELRNPPANASRVLSSGHC*CCCCPR Trigger: ACGTGGACAGCAGCAGCAGCAGCAGTGGCCGCTGGA...CAGCACTCGGGAGGCATTGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCCTTGCGGGGGTGGTTCCCATCTTCAGCCTGGCCATCTTGTGGGCCCACGAGGGCCTGCAGCATCTaGTACTTGCACCAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSLRGWFPSSAWPSCGPTRACSI*YLHQGS Trigger: GGACCCCTGGTGCAAGTACCAGATGCTGCAGGCCCT...CGTGGGCCCACAAGATGGCCAGGCTGAAGATGGGAACCACCCCCGCAAGGAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR TCA 90 bp | GACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCAATGCCTCCCGAGTGCTGAGCAGCACACGGCAGTaGCTACGACTCAGTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DQAGLELRNPPANASRVLSSTRQ*LRLSAW Trigger: CCAGGCACTGAGTCGTAGTCACTGCCGTGTGCTGCT...CAGCACTCGGGAGGCATTGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTGGTCTCCTTGCGGGGGTGGTTCCCATCTTCAGCCTGGCCATCTTGTGGGTGGGACGGAGGAGGATaGAGCCATAGTGCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLVSLRGWFPSSAWPSCGWDGGG*SHSAGL Trigger: GAGGCCTGCACTATGGCTTCATCCTCCTCCGTCCCA...CCCACAAGATGGCCAGGCTGAAGATGGGAACCACCCCCGCAAGGAGACCAGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTCCTGGAACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCGCTGCAGCTCGAGGGTaGGAGACCATCCTGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AVLELCRPGWPRTQKSACAAARG*ETILCG Trigger: GCCACACAGGATGGTCTCTCACCCTCGAGCTGCAGC...GCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTTCCAGGACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTGGTCTCCTTGCGGGGGTGGTTCCCATCTTCAGCCTGGCCATCTTGTGGGGCCTCCGTCAGGGCCTaGAGCATCTGGTACTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLVSLRGWFPSSAWPSCGASVRA*SIWYLH Trigger: GTGCAAGTACCAGATGCTGCAGGCCCTGACGGAGGC...CCCACAAGATGGCCAGGCTGAAGATGGGAACCACCCCCGCAAGGAGACCAGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTGGTCTCCTTGCGGGGGTGGTTCCCATCTTCAGCCTGGCCATCTTGTGGGAGGGCCTGCAGCATCTaGTACTTGCACCAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLVSLRGWFPSSAWPSCGRACSI*YLHQGS Trigger: GGACCCCTGGTGCAAGTACCAGATGCTGCAGGCCCT...CCCACAAGATGGCCAGGCTGAAGATGGGAACCACCCCCGCAAGGAGACCAGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCCTTGCGGGGGTGGTTCCCATCTTCAGCCTGGCCATCTTGTGGGCCCACGCTGTGTGGCTGTCTGTaGACCATCATAGAGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLRGWFPSSAWPSCGPTLCGCL*TIIEVA Trigger: AGCCACCTCTATGATGGTTCACAGACAGCCACACAG...CGTGGGCCCACAAGATGGCCAGGCTGAAGATGGGAACCACCCCCGCAAGGAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTCAGCGCAGAGGGGACACTGCTGACCTTCCCGATAGCACAGTCCCTTGACGCCTCCGTCAGGGCCTaGAGCATCTGGTACTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QFSAEGTLLTFPIAQSLDASVRA*SIWYLH Trigger: GTGCAAGTACCAGATGCTGCAGGCCCTGACGGAGGC...GTCAAGGGACTGTGCTATCGGGAAGGTCAGCAGTGTCCCCTCTGCGCTGAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR GCA 90 bp | CTTCTTCCTGGTCTCCTTGCGGGGGTGGTTCCCATCTTCAGCCTGGCCATCTTGGCTGCATCCCGAAGCTaGAGGAAGCAGCGTAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLPGLLAGVVPIFSLAILAASRS*RKQRRL Trigger: CAGTCTACGCTGCTTCCTGCAGCTTCGGGATGCAGC...CAAGATGGCCAGGCTGAAGATGGGAACCACCCCCGCAAGGAGACCAGGAAGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR GCA 90 bp | GCTGTCCTGGAACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCGCAGCATCTGGTACTTaGACCAGGGGTCCCGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVLELCRPGWPRTQKSACAASGT*TRGPEG Trigger: TCCTTCGGGACCCCTGGTGCAAGTACCAGATGCTGC...GCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTTCCAGGACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| CDS-3UTR TCA 90 bp | CTCGAATTTCTGACTTCCTCGTTGTCTTCCTGGGGGAGTCCCTGGCTTCCTCCTTGGGACGGAGGAGGATaGAGCCATAGTGCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEFLTSSLSSWGSPWLPPWDGGG*SHSAGL Trigger: GAGGCCTGCACTATGGCTTCATCCTCCTCCGTCCCA...AGGAGGAAGCCAGGGACTCCCCCAGGAAGACAACGAGGAAGTCAGAAATTCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR TCA 90 bp | GGACTGGATACTTGCCACCTCTTCTCAGCTTCCCTAGGCAACTTCTGGCTCATCGCTGCAGCTCGAGGGTaGGAGACCATCCTGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLDTCHLFSASLGNFWLIAAARG*ETILCG Trigger: GCCACACAGGATGGTCTCTCACCCTCGAGCTGCAGC...GATGAGCCAGAAGTTGCCTAGGGAAGCTGAGAAGAGGTGGCAAGTATCCAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR TCA 90 bp | CTTGAGGAGTGGTATCCATTTCCCCCGTGCCTGATGCCAGAGGAAGAAGACAGCAGCAGCACACGGCAGTaGCTACGACTCAGTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEEWYPFPPCLMPEEEDSSSTRQ*LRLSAW Trigger: CCAGGCACTGAGTCGTAGTCACTGCCGTGTGCTGCT...GCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTCCTCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR GCA 90 bp | TGCCACCTCTTCTCAGCTTCCCTAGGCAACTTCTGGCTCATCAATCGGGTTCACTCCAGCGGCCACTGCTaGTGCTGCTGCTGTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: CHLFSASLGNFWLINRVHSSGHC*CCCCPR Trigger: ACGTGGACAGCAGCAGCAGCAGCAGTGGCCGCTGGA...GTGAACCCGATTGATGAGCCAGAAGTTGCCTAGGGAAGCTGAGAAGAGGTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR CCA 90 bp | CTCGAATTTCTGACTTCCTCGTTGTCTTCCTGGGGGAGTCCCTGGCTTCCTCCTAGGGCCTGCAGCATCTaGTACTTGCACCAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEFLTSSLSSWGSPWLPPRACSI*YLHQGS Trigger: GGACCCCTGGTGCAAGTACCAGATGCTGCAGGCCCT...AGGAGGAAGCCAGGGACTCCCCCAGGAAGACAACGAGGAAGTCAGAAATTCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| 3UTR CAA 72 bp | TGCCGTGAAGCACAGGCTCTCTTGAAGCATGGGCTCTaGGGCTCTTTCAGATGTCTGAGGAGGCCCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CREAQALLKHGL*GSFRCLRRPLG Trigger: ACCCAGGGGCCTCCTCAGACATCTGAAAGAGCCCAAGAGCCCATGCTTCAAGAGAGCCTGTGCTTCACGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGGTATCCATTTCCCCCGTGCCTGATGCCAGAGGAAGAAGACAGCCATGTATGGGACGGAGGAGGATaGAGCCATAGTGCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EWYPFPPCLMPEEEDSHVWDGGG*SHSAGL Trigger: GAGGCCTGCACTATGGCTTCATCCTCCTCCGTCCCA...TACATGGCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR GCA 90 bp | ATGTATCAGCTTCCTATCCAGTTCAGCGCAGAGGGGACACTGCTGACCTTCCCGGCTGCATCCCGAAGCTaGAGGAAGCAGCGTAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: MYQLPIQFSAEGTLLTFPAASRS*RKQRRL Trigger: CAGTCTACGCTGCTTCCTGCAGCTTCGGGATGCAGC...CGGGAAGGTCAGCAGTGTCCCCTCTGCGCTGAACTGGATAGGAAGCTGATACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR GCA 90 bp | ATGTATCAGCTTCCTATCCAGTTCAGCGCAGAGGGGACACTGCTGACCTTCCCGGCAGCATCTGGTACTTaGACCAGGGGTCCCGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MYQLPIQFSAEGTLLTFPAASGT*TRGPEG Trigger: TCCTTCGGGACCCCTGGTGCAAGTACCAGATGCTGC...CGGGAAGGTCAGCAGTGTCCCCTCTGCGCTGAACTGGATAGGAAGCTGATACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCTCCTTGCGGGGGTGGTTCCCATCTTCAGCCTGGCCATCTTGTGGGCCCAAGAGACCATCCTGTGTaGCTGTCTGTGAACCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: WSPCGGGSHLQPGHLVGPRDHPV*LSVNHH Trigger: ATGATGGTTCACAGACAGCCACACAGGATGGTCTCT...TGGGCCCACAAGATGGCCAGGCTGAAGATGGGAACCACCCCCGCAAGGAGACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR CCA 90 bp | CCACCACCGCCTGGCTCACCCTGGCTTTCCTTCTTCTTACCTGTTTCTGGATACGTCCCGAAGGAAGCCTaGAGTGATGAGCAGCACACG | + |
|
Preference number: 4 (lower is better) Translates to: PPPPGSPWLSFFLPVSGYVPKEA*SDEQHT Trigger: CGTGTGCTGCTCATCACTCCAGGCTTCCTTCGGGAC...GTATCCAGAAACAGGTAAGAAGAAGGAAAGCCAGGGTGAGCCAGGCGGTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| 3UTR CAA 72 bp | TCTGAGGAGGCCCCTGGGTCACATGATCTGTGGGCTTaGATCCAGGTGAAGGAGCCACACCCTGGCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEEAPGSHDLWA*IQVKEPHPGFL Trigger: AAGAAAGCCAGGGTGTGGCTCCTTCACCTGGATCAAAGCCCACAGATCATGTGACCCAGGGGCCTCCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGAGGAAGAAGACAGCCATGTATCAGCTTCCTATCCAGTTCAGCGCAGAGGGCTGCATCCCGAAGCTaGAGGAAGCAGCGTAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ARGRRQPCISFLSSSAQRAASRS*RKQRRL Trigger: CAGTCTACGCTGCTTCCTGCAGCTTCGGGATGCAGC...CCTCTGCGCTGAACTGGATAGGAAGCTGATACATGGCTGTCTTCTTCCTCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR CCA 90 bp | TTCCTGGTCTCCTTGCGGGGGTGGTTCCCATCTTCAGCCTGGCCATCTTGTGGGAGATCGGCATCTTCTTaGGCTTCTTCAACAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLVSLRGWFPSSAWPSCGRSASS*ASSTEP Trigger: AGGCTCTGTTGAAGAAGCCCAAGAAGATGCCGATCT...CCCACAAGATGGCCAGGCTGAAGATGGGAACCACCCCCGCAAGGAGACCAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGGTATCCATTTCCCCCGTGCCTGATGCCAGAGGAAGAAGACAGCCATGTAGTCCCGAAGGAAGCCTaGAGTGATGAGCAGCACACG | + |
|
Preference number: 4 (lower is better) Translates to: EWYPFPPCLMPEEEDSHVVPKEA*SDEQHT Trigger: CGTGTGCTGCTCATCACTCCAGGCTTCCTTCGGGAC...TACATGGCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCCTTTGTTTTGGTGGTGCTGGAGGTAGAATCCAAGCCCTCAGGTATGCTAGCTGCAGCTCGAGGGTaGGAGACCATCCTGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSFVLVVLEVESKPSGMLAAARG*ETILCG Trigger: GCCACACAGGATGGTCTCTCACCCTCGAGCTGCAGC...TAGCATACCTGAGGGCTTGGATTCTACCTCCAGCACCACCAAAACAAAGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTGAAAGGGTCATTCCACCGTAAAGGGTGGAGAACTGCTGACCGACACAAAGCCTCCGTCAGGGCCTaGAGCATCTGGTACTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVKGSFHRKGWRTADRHKASVRA*SIWYLH Trigger: GTGCAAGTACCAGATGCTGCAGGCCCTGACGGAGGC...TTTGTGTCGGTCAGCAGTTCTCCACCCTTTACGGTGGAATGACCCTTTCACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| CDS-3UTR TCA 90 bp | AGCTGGCTCTGGCTCTGCTGTATATACTGGATTAATGACTGCTGTGAGCTATTCGCTGCAGCTCGAGGGTaGGAGACCATCCTGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SWLWLCCIYWINDCCELFAAARG*ETILCG Trigger: GCCACACAGGATGGTCTCTCACCCTCGAGCTGCAGC...GAATAGCTCACAGCAGTCATTAATCCAGTATATACAGCAGAGCCAGAGCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR CCA 90 bp | GTGCTGGAGGTAGAATCCAAGCCCTCAGGTATGCTAAGCAAGCCTACCACGGACCTACGACTCAGTGCCTaGCATAGCTCCGAAACAATG | + |
|
Preference number: 4 (lower is better) Translates to: VLEVESKPSGMLSKPTTDLRLSA*HSSETM Trigger: CATTGTTTCGGAGCTATGCCAGGCACTGAGTCGTAG...GTCCGTGGTAGGCTTGCTTAGCATACCTGAGGGCTTGGATTCTACCTCCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| 3UTR CAA 72 bp | CAACACAAAGCCAGATGCCGTGAAGCACAGGCTCTCTaGAAGCATGGGCTCTTGGGCTCTTTCAGATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QHKARCREAQAL*KHGLLGSFRCL Trigger: CAGACATCTGAAAGAGCCCAAGAGCCCATGCTTCAAGAGAGCCTGTGCTTCACGGCATCTGGCTTTGTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
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| CDS-3UTR TCA 90 bp | AGCTGGCTCTGGCTCTGCTGTATATACTGGATTAATGACTGCTGTGAGCTATTCTGGGACGGAGGAGGATaGAGCCATAGTGCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SWLWLCCIYWINDCCELFWDGGG*SHSAGL Trigger: GAGGCCTGCACTATGGCTTCATCCTCCTCCGTCCCA...GAATAGCTCACAGCAGTCATTAATCCAGTATATACAGCAGAGCCAGAGCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR TCA 90 bp | CTCTGGCTCTGCTGTATATACTGGATTAATGACTGCTGTGAGCTATTCCCAGCTAGCAGCACACGGCAGTaGCTACGACTCAGTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWLCCIYWINDCCELFPASSTRQ*LRLSAW Trigger: CCAGGCACTGAGTCGTAGTCACTGCCGTGTGCTGCT...AGCTGGGAATAGCTCACAGCAGTCATTAATCCAGTATATACAGCAGAGCCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR GCA 90 bp | TGCCACCACCGCCTGGCTCACCCTGGCTTTCCTTCTTCTTACCTGTTTCTGGATTTCTTCAACAGAGCCTaGCTGAACCAGTCAGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: CHHRLAHPGFPSSYLFLDFFNRA*LNQSAI Trigger: GATAGCTGACTGGTTCAGGCAGGCTCTGTTGAAGAA...ATCCAGAAACAGGTAAGAAGAAGGAAAGCCAGGGTGAGCCAGGCGGTGGTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| CDS-3UTR GCA 90 bp | CTCGAATTTCTGACTTCCTCGTTGTCTTCCTGGGGGAGTCCCTGGCTTCCTCCTTTCTTCAACAGAGCCTaGCTGAACCAGTCAGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: LEFLTSSLSSWGSPWLPPFFNRA*LNQSAI Trigger: GATAGCTGACTGGTTCAGGCAGGCTCTGTTGAAGAA...AGGAGGAAGCCAGGGACTCCCCCAGGAAGACAACGAGGAAGTCAGAAATTCGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR GCA 90 bp | CTCTGGCTCTGCTGTATATACTGGATTAATGACTGCTGTGAGCTATTCCCAGCTGGCCACTGCTGCTGCTaGTGCTGTCCACGTGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWLCCIYWINDCCELFPAGHCCC*CCPRVL Trigger: CAACACACGTGGACAGCAGCAGCAGCAGCAGTGGCC...AGCTGGGAATAGCTCACAGCAGTCATTAATCCAGTATATACAGCAGAGCCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR GCA 90 bp | TCTGGCTCTGCTGTATATACTGGATTAATGACTGCTGTGAGCTATTCCCAGCTTTCCAGCGGCCACTGCTaGTGCTGCTGCTGTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: SGSAVYTGLMTAVSYSQLSSGHC*CCCCPR Trigger: ACGTGGACAGCAGCAGCAGCAGCAGTGGCCGCTGGA...AAGCTGGGAATAGCTCACAGCAGTCATTAATCCAGTATATACAGCAGAGCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR GCA 90 bp | TTCCTTCTTCTTACCTGTTTCTGGATACAGAGCAGCTGCCAGGTTTGTGTTTTCTCCAGCGGCCACTGCTaGTGCTGCTGCTGTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: FLLLTCFWIQSSCQVCVFSSGHC*CCCCPR Trigger: ACGTGGACAGCAGCAGCAGCAGCAGTGGCCGCTGGA...GAAAACACAAACCTGGCAGCTGCTCTGTATCCAGAAACAGGTAAGAAGAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
||
| CDS-3UTR GCA 90 bp | AGCTGGCTCTGGCTCTGCTGTATATACTGGATTAATGACTGCTGTGAGCTATTCGCCTCCGTCAGGGCCTaGAGCATCTGGTACTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SWLWLCCIYWINDCCELFASVRA*SIWYLH Trigger: GTGCAAGTACCAGATGCTGCAGGCCCTGACGGAGGC...GAATAGCTCACAGCAGTCATTAATCCAGTATATACAGCAGAGCCAGAGCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR CCA 90 bp | CTCGAATTTCTGACTTCCTCGTTGTCTTCCTGGGGGAGTCCCTGGCTTCCTCCTAGATCGGCATCTTCTTaGGCTTCTTCAACAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LEFLTSSLSSWGSPWLPPRSASS*ASSTEP Trigger: AGGCTCTGTTGAAGAAGCCCAAGAAGATGCCGATCT...AGGAGGAAGCCAGGGACTCCCCCAGGAAGACAACGAGGAAGTCAGAAATTCGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGGTATCCATTTCCCCCGTGCCTGATGCCAGAGGAAGAAGACAGCCATGTACTACGACTCAGTGCCTaGCATAGCTCCGAAACAATG | + |
|
Preference number: 4 (lower is better) Translates to: EWYPFPPCLMPEEEDSHVLRLSA*HSSETM Trigger: CATTGTTTCGGAGCTATGCCAGGCACTGAGTCGTAG...TACATGGCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR CCA 90 bp | TGCCACCTCTTCTCAGCTTCCCTAGGCAACTTCTGGCTCATCAATCGGGTTCACCTACGACTCAGTGCCTaGCATAGCTCCGAAACAATG | + |
|
Preference number: 4 (lower is better) Translates to: CHLFSASLGNFWLINRVHLRLSA*HSSETM Trigger: CATTGTTTCGGAGCTATGCCAGGCACTGAGTCGTAG...GTGAACCCGATTGATGAGCCAGAAGTTGCCTAGGGAAGCTGAGAAGAGGTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGCTCTGGCTCTGCTGTATATACTGGATTAATGACTGCTGTGAGCTATTCAGGGCCTGCAGCATCTaGTACTTGCACCAGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SWLWLCCIYWINDCCELFRACSI*YLHQGS Trigger: GGACCCCTGGTGCAAGTACCAGATGCTGCAGGCCCT...GAATAGCTCACAGCAGTCATTAATCCAGTATATACAGCAGAGCCAGAGCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGCTCTGCTGTATATACTGGATTAATGACTGCTGTGAGCTATTCCCAGCTTAGCAGCACACGGCAGTaGCTACGACTCAGTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGSAVYTGLMTAVSYSQLSSTRQ*LRLSAW Trigger: CCAGGCACTGAGTCGTAGTCACTGCCGTGTGCTGCT...AAGCTGGGAATAGCTCACAGCAGTCATTAATCCAGTATATACAGCAGAGCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR GCA 90 bp | TGCCACCTCTTCTCAGCTTCCCTAGGCAACTTCTGGCTCATCAATCGGGTTCACTTCTTCAACAGAGCCTaGCTGAACCAGTCAGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: CHLFSASLGNFWLINRVHFFNRA*LNQSAI Trigger: GATAGCTGACTGGTTCAGGCAGGCTCTGTTGAAGAA...GTGAACCCGATTGATGAGCCAGAAGTTGCCTAGGGAAGCTGAGAAGAGGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR GCA 90 bp | AGCTGGCTCTGGCTCTGCTGTATATACTGGATTAATGACTGCTGTGAGCTATTCGCAGCATCTGGTACTTaGACCAGGGGTCCCGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SWLWLCCIYWINDCCELFAASGT*TRGPEG Trigger: TCCTTCGGGACCCCTGGTGCAAGTACCAGATGCTGC...GAATAGCTCACAGCAGTCATTAATCCAGTATATACAGCAGAGCCAGAGCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGGTATCCATTTCCCCCGTGCCTGATGCCAGAGGAAGAAGACAGCCATGTAAGATCGGCATCTTCTTaGGCTTCTTCAACAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EWYPFPPCLMPEEEDSHVRSASS*ASSTEP Trigger: AGGCTCTGTTGAAGAAGCCCAAGAAGATGCCGATCT...TACATGGCTGTCTTCTTCCTCTGGCATCAGGCACGGGGGAAATGGATACCACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGCTCTGCTGTATATACTGGATTAATGACTGCTGTGAGCTATTCCCAGCTTGTCCCGAAGGAAGCCTaGAGTGATGAGCAGCACACG | + |
|
Preference number: 4 (lower is better) Translates to: SGSAVYTGLMTAVSYSQLVPKEA*SDEQHT Trigger: CGTGTGCTGCTCATCACTCCAGGCTTCCTTCGGGAC...AAGCTGGGAATAGCTCACAGCAGTCATTAATCCAGTATATACAGCAGAGCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
||
| 3UTR CAA 72 bp | CCTTGTCTCTCCCTGGGGATATACTCTGGTGCTAGATaGAGAACCGGTTCCTCACAGTTCAACACAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PCLSLGIYSGAR*RTGSSQFNTKP Trigger: TGGCTTTGTGTTGAACTGTGAGGAACCGGTTCTCAATCTAGCACCAGAGTATATCCCCAGGGAGAGACAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTTGTTTTGGTGGTGCTGGAGGTAGAATCCAAGCCCTCAGGTATGCTATTCTTCAACAGAGCCTaGCTGAACCAGTCAGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: FSFVLVVLEVESKPSGMLFFNRA*LNQSAI Trigger: GATAGCTGACTGGTTCAGGCAGGCTCTGTTGAAGAA...TAGCATACCTGAGGGCTTGGATTCTACCTCCAGCACCACCAAAACAAAGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| CDS-3UTR GCA 90 bp | GATTTCTTTATGTGTATGATTGTTTTGCCTGCATCTATGGAGGTGTTCACGTGTGCAGCATCTGGTACTTaGACCAGGGGTCCCGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: DFFMCMIVLPASMEVFTCAASGT*TRGPEG Trigger: TCCTTCGGGACCCCTGGTGCAAGTACCAGATGCTGC...ACACGTGAACACCTCCATAGATGCAGGCAAAACAATCATACACATAAAGAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| CDS-3UTR CCA 90 bp | TCTGGCTCTGCTGTATATACTGGATTAATGACTGCTGTGAGCTATTCCCAGCTTCTACGACTCAGTGCCTaGCATAGCTCCGAAACAATG | + |
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Preference number: 4 (lower is better) Translates to: SGSAVYTGLMTAVSYSQLLRLSA*HSSETM Trigger: CATTGTTTCGGAGCTATGCCAGGCACTGAGTCGTAG...AAGCTGGGAATAGCTCACAGCAGTCATTAATCCAGTATATACAGCAGAGCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR CCA 90 bp | TCTGGCTCTGCTGTATATACTGGATTAATGACTGCTGTGAGCTATTCCCAGCTTAGATCGGCATCTTCTTaGGCTTCTTCAACAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SGSAVYTGLMTAVSYSQLRSASS*ASSTEP Trigger: AGGCTCTGTTGAAGAAGCCCAAGAAGATGCCGATCT...AAGCTGGGAATAGCTCACAGCAGTCATTAATCCAGTATATACAGCAGAGCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| 3UTR CAA 72 bp | CATGTATGTGGTTGCTGGTATTTGAACTCAGGACCTTaGGAAAAGCAGTCAGTGTTCTTACCCGCTGAACCA | + |
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Preference number: 4 (lower is better) Translates to: HVCGCWYLNSGP*EKQSVFLPAEP Trigger: TGGTTCAGCGGGTAAGAACACTGACTGCTTTTCCAAAGGTCCTGAGTTCAAATACCAGCAACCACATACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
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| 3UTR CAA 72 bp | CTCATTATGGGTGGTTGTGAGCCACCATGTATGTGGTaGCTGGTATTTGAACTCAGGACCTTTGGAAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: LIMGGCEPPCMW*LVFELRTFGKA Trigger: TGCTTTTCCAAAGGTCCTGAGTTCAAATACCAGCAACCACATACATGGTGGCTCACAACCACCCATAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
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| CDS GCA 90 bp | CCGGCGGATAGGCGGCTCTGGACAGGCCGGACAGCAGGGGTATGGTaGAACCCTCCGACGCCGGGGCCTCCGTCAGGGCCTGCAGCATCT | + |
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Preference number: 5 (lower is better) Translates to: PADRRLWTGRTAGVW*NPPTPGPPSGPAAS Trigger: AGATGCTGCAGGCCCTGACGGAGGCCCCGGCGTCGGAGGGTTGCACCATACCCCTGCTGTCCGGCCTGTCCAGAGCCGCCTATCCGCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS CCA 90 bp | GTTCCGGCGGATAGGCGGCTCTGGACAGGCCGGACAGCAGGGGTATaGTGCAACCCTCCGACGCCGGGGCCTCCGTCAGGGCCTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: VPADRRLWTGRTAGV*CNPPTPGPPSGPAA Trigger: TGCTGCAGGCCCTGACGGAGGCCCCGGCGTCGGAGGGTTGCACCATACCCCTGCTGTCCGGCCTGTCCAGAGCCGCCTATCCGCCGGAAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS CCA 90 bp | CGCCACCCGGGGCTGCATCCCGAAGCTGCAGGAAGCAGCGTAGACTaGCCTGGCTACCCTCCAAGTAGGAGACCAGCTCCTGGGCCGCCT | + |
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Preference number: 5 (lower is better) Translates to: RHPGLHPEAAGSSVD*PGYPPSRRPAPGPP Trigger: AGGCGGCCCAGGAGCTGGTCTCCTACTTGGAGGGTAGCCAGGCCAGTCTACGCTGCTTCCTGCAGCTTCGGGATGCAGCCCCGGGTGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS CCA 90 bp | GTGCAACCCTCCGACGCCGGGGCCTCCGTCAGGGCCTGCAGCATCTaGTACTTGCACCAGGGGTCCCGAAGGAAGCCTGGAGTGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: VQPSDAGASVRACSI*YLHQGSRRKPGVMS Trigger: GCTCATCACTCCAGGCTTCCTTCGGGACCCCTGGTGCAAGTACCAGATGCTGCAGGCCCTGACGGAGGCCCCGGCGTCGGAGGGTTGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR CAA 90 bp | GTCTCCTTGCGGGGGTGGTTCCCATCTTCAGCCTGGCCATCTTGTGGGCCCACGTGCAGCATCTGGTACTaGCACCAGGGGTCCCGAAGG | + |
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Preference number: 5 (lower is better) Translates to: VSLRGWFPSSAWPSCGPTCSIWY*HQGSRR Trigger: CCTTCGGGACCCCTGGTGCAAGTACCAGATGCTGCA...CGTGGGCCCACAAGATGGCCAGGCTGAAGATGGGAACCACCCCCGCAAGGAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS CCA 90 bp | CACGGCAGTGACTACGACTCAGTGCCTGGCATAGCTCCGAAACAATaGCGCCACCCGGGGCTGCATCCCGAAGCTGCAGGAAGCAGCGTA | + |
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Preference number: 5 (lower is better) Translates to: HGSDYDSVPGIAPKQ*RHPGLHPEAAGSSV Trigger: TACGCTGCTTCCTGCAGCTTCGGGATGCAGCCCCGGGTGGCGCCATTGTTTCGGAGCTATGCCAGGCACTGAGTCGTAGTCACTGCCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS CCA 90 bp | GGCCTGCAGCATCTGGTACTTGCACCAGGGGTCCCGAAGGAAGCCTaGAGTGATGAGCAGCACACGGCAGTGACTACGACTCAGTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: GLQHLVLAPGVPKEA*SDEQHTAVTTTQCL Trigger: CAGGCACTGAGTCGTAGTCACTGCCGTGTGCTGCTCATCACTCCAGGCTTCCTTCGGGACCCCTGGTGCAAGTACCAGATGCTGCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS TCA 90 bp | CAGGGGTCCCGAAGGAAGCCTGGAGTGATGAGCAGCACACGGCAGTaGCTACGACTCAGTGCCTGGCATAGCTCCGAAACAATGGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QGSRRKPGVMSSTRQ*LRLSAWHSSETMAP Trigger: TGGCGCCATTGTTTCGGAGCTATGCCAGGCACTGAGTCGTAGTCACTGCCGTGTGCTGCTCATCACTCCAGGCTTCCTTCGGGACCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS GCA 90 bp | CCTCCAAGTCCTCCTCACTGTGGCACACGCAGACATCGTAGTCTTTaGTCCAGCGGCCACTGCTGCTGCTGCTGCTGTCCACGTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPSPPHCGTRRHRSL*SSGHCCCCCCPRVL Trigger: CAACACACGTGGACAGCAGCAGCAGCAGCAGTGGCCGCTGGAGCAAAGACTACGATGTCTGCGTGTGCCACAGTGAGGAGGACTTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR CAA 90 bp | TTCCTGGTCTCCTTGCGGGGGTGGTTCCCATCTTCAGCCTGGCCATCTTGTGGGTTGTCTCGAGGCTTCTaGGACGGAGTGGAGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLVSLRGWFPSSAWPSCGLSRGF*DGVEEA Trigger: AGCCTCCTCCACTCCGTCCAAGAAGCCTCGAGACAA...CCCACAAGATGGCCAGGCTGAAGATGGGAACCACCCCCGCAAGGAGACCAGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS CCA 90 bp | GACTCGGGGGTGAGCTGCAGCTCGAGGGTGAGAGACCATCCTGTGTaGCTGTCTGTGAACCATCATAGAGGTGGCTTTCCTGGGAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: DSGVSCSSRVRDHPV*LSVNHHRGGFPGRS Trigger: CGATCTCCCAGGAAAGCCACCTCTATGATGGTTCACAGACAGCCACACAGGATGGTCTCTCACCCTCGAGCTGCAGCTCACCCCCGAGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176611.2 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR CAA 90 bp | ATCCAGTTCAGCGCAGAGGGGACACTGCTGACCTTCCCGATAGCACAGTCCCTTTGCAGCATCTGGTACTaGCACCAGGGGTCCCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: IQFSAEGTLLTFPIAQSLCSIWY*HQGSRR Trigger: CCTTCGGGACCCCTGGTGCAAGTACCAGATGCTGCA...AAGGGACTGTGCTATCGGGAAGGTCAGCAGTGTCCCCTCTGCGCTGAACTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR CAA 90 bp | CCACCACCGCCTGGCTCACCCTGGCTTTCCTTCTTCTTACCTGTTTCTGGATACTTGTCTCGAGGCTTCTaGGACGGAGTGGAGGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: PPPPGSPWLSFFLPVSGYLSRGF*DGVEEA Trigger: AGCCTCCTCCACTCCGTCCAAGAAGCCTCGAGACAA...GTATCCAGAAACAGGTAAGAAGAAGGAAAGCCAGGGTGAGCCAGGCGGTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| CDS-3UTR CAA 90 bp | GGACTGGATACTTGCCACCTCTTCTCAGCTTCCCTAGGCAACTTCTGGCTCATCTGCAGCATCTGGTACTaGCACCAGGGGTCCCGAAGG | + |
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Preference number: 5 (lower is better) Translates to: GLDTCHLFSASLGNFWLICSIWY*HQGSRR Trigger: CCTTCGGGACCCCTGGTGCAAGTACCAGATGCTGCA...GATGAGCCAGAAGTTGCCTAGGGAAGCTGAGAAGAGGTGGCAAGTATCCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR CAA 90 bp | ATGTATCAGCTTCCTATCCAGTTCAGCGCAGAGGGGACACTGCTGACCTTCCCGGAGATCGGCATCTTCTaGGGCTTCTTCAACAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: MYQLPIQFSAEGTLLTFPEIGIF*GFFNRA Trigger: GGCTCTGTTGAAGAAGCCCAAGAAGATGCCGATCTC...CGGGAAGGTCAGCAGTGTCCCCTCTGCGCTGAACTGGATAGGAAGCTGATACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS-3UTR CAA 90 bp | GGAGACAAGGACATTCAGCTGGCCATGTTTCTGTTCTTATTCGAACACAGGTGGTGCAGCATCTGGTACTaGCACCAGGGGTCCCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GDKDIQLAMFLFLFEHRWCSIWY*HQGSRR Trigger: CCTTCGGGACCCCTGGTGCAAGTACCAGATGCTGCA...CCACCTGTGTTCGAATAAGAACAGAAACATGGCCAGCTGAATGTCCTTGTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175765.8 |
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| CDS-3UTR CAA 90 bp | GTTCACGTGTGTACCTGGTGCTCAAGGAGGTCTTGGTCAGAGAAGACATCAGATGAGATCGGCATCTTCTaGGGCTTCTTCAACAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VHVCTWCSRRSWSEKTSDEIGIF*GFFNRA Trigger: GGCTCTGTTGAAGAAGCCCAAGAAGATGCCGATCTC...ATCTGATGTCTTCTCTGACCAAGACCTCCTTGAGCACCAGGTACACACGTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000177129.8 |
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| CDS-3UTR CAA 90 bp | TCTGGCTCTGCTGTATATACTGGATTAATGACTGCTGTGAGCTATTCCCAGCTTTTGTCTCGAGGCTTCTaGGACGGAGTGGAGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGSAVYTGLMTAVSYSQLLSRGF*DGVEEA Trigger: AGCCTCCTCCACTCCGTCCAAGAAGCCTCGAGACAA...AAGCTGGGAATAGCTCACAGCAGTCATTAATCCAGTATATACAGCAGAGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS GCA 72 bp | AGGCGGCTCTGGACAGGCCGGACAGCAGGGGTATGGTaGAACCCTCCGACGCCGGGGCCTCCGTCAGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRLWTGRTAGVW*NPPTPGPPSGP Trigger: AGGCCCTGACGGAGGCCCCGGCGTCGGAGGGTTGCACCATACCCCTGCTGTCCGGCCTGTCCAGAGCCGCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS CCA 72 bp | GATAGGCGGCTCTGGACAGGCCGGACAGCAGGGGTATaGTGCAACCCTCCGACGCCGGGGCCTCCGTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: DRRLWTGRTAGV*CNPPTPGPPSG Trigger: CCCTGACGGAGGCCCCGGCGTCGGAGGGTTGCACCATACCCCTGCTGTCCGGCCTGTCCAGAGCCGCCTATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS GCA 72 bp | GTGCAACCCTCCGACGCCGGGGCCTCCGTCAGGGCCTaGAGCATCTGGTACTTGCACCAGGGGTCCCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: VQPSDAGASVRA*SIWYLHQGSRR Trigger: CCTTCGGGACCCCTGGTGCAAGTACCAGATGCTGCAGGCCCTGACGGAGGCCCCGGCGTCGGAGGGTTGCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS CCA 72 bp | TCCGACGCCGGGGCCTCCGTCAGGGCCTGCAGCATCTaGTACTTGCACCAGGGGTCCCGAAGGAAGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SDAGASVRACSI*YLHQGSRRKPG Trigger: TCCAGGCTTCCTTCGGGACCCCTGGTGCAAGTACCAGATGCTGCAGGCCCTGACGGAGGCCCCGGCGTCGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS CAA 72 bp | GCCGGGGCCTCCGTCAGGGCCTGCAGCATCTGGTACTaGCACCAGGGGTCCCGAAGGAAGCCTGGAGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: AGASVRACSIWY*HQGSRRKPGVM Trigger: CATCACTCCAGGCTTCCTTCGGGACCCCTGGTGCAAGTACCAGATGCTGCAGGCCCTGACGGAGGCCCCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS GCA 72 bp | GAAACAATGGCGCCACCCGGGGCTGCATCCCGAAGCTaGAGGAAGCAGCGTAGACTGGCCTGGCTACCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ETMAPPGAASRS*RKQRRLAWLPS Trigger: GGAGGGTAGCCAGGCCAGTCTACGCTGCTTCCTGCAGCTTCGGGATGCAGCCCCGGGTGGCGCCATTGTTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS CCA 72 bp | GGGCTGCATCCCGAAGCTGCAGGAAGCAGCGTAGACTaGCCTGGCTACCCTCCAAGTAGGAGACCAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GLHPEAAGSSVD*PGYPPSRRPAP Trigger: AGGAGCTGGTCTCCTACTTGGAGGGTAGCCAGGCCAGTCTACGCTGCTTCCTGCAGCTTCGGGATGCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS CCA 72 bp | GACTACGACTCAGTGCCTGGCATAGCTCCGAAACAATaGCGCCACCCGGGGCTGCATCCCGAAGCTGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: DYDSVPGIAPKQ*RHPGLHPEAAG Trigger: TCCTGCAGCTTCGGGATGCAGCCCCGGGTGGCGCCATTGTTTCGGAGCTATGCCAGGCACTGAGTCGTAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS GCA 72 bp | ACACGCAGACATCGTAGTCTTTGCTCCAGCGGCCACTaGTGCTGCTGCTGCTGTCCACGTGTGTTGGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TRRHRSLCSSGH*CCCCCPRVLVA Trigger: CGCCACCAACACACGTGGACAGCAGCAGCAGCAGCAGTGGCCGCTGGAGCAAAGACTACGATGTCTGCGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176611.2 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS GCA 72 bp | CCTCCTCACTGTGGCACACGCAGACATCGTAGTCTTTaGTCCAGCGGCCACTGCTGCTGCTGCTGCTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PPHCGTRRHRSL*SSGHCCCCCCP Trigger: TGGACAGCAGCAGCAGCAGCAGTGGCCGCTGGAGCAAAGACTACGATGTCTGCGTGTGCCACAGTGAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS TCA 72 bp | AGCCTCCGTCCTTGCCTCTGCCATCCACATAGTACATaGATCGGAGTTCCGGCGGATAGGCGGCTCTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SLRPCLCHPHST*IGVPADRRLWT Trigger: TGTCCAGAGCCGCCTATCCGCCGGAACTCCGATTCATGTACTATGTGGATGGCAGAGGCAAGGACGGAGGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000175765.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS CCA 72 bp | CATCTGGTACTTGCACCAGGGGTCCCGAAGGAAGCCTaGAGTGATGAGCAGCACACGGCAGTGACTACGACT | + |
|
Preference number: 6 (lower is better) Translates to: HLVLAPGVPKEA*SDEQHTAVTTT Trigger: AGTCGTAGTCACTGCCGTGTGCTGCTCATCACTCCAGGCTTCCTTCGGGACCCCTGGTGCAAGTACCAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS TCA 72 bp | CGAAGGAAGCCTGGAGTGATGAGCAGCACACGGCAGTaGCTACGACTCAGTGCCTGGCATAGCTCCGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: RRKPGVMSSTRQ*LRLSAWHSSET Trigger: TGTTTCGGAGCTATGCCAGGCACTGAGTCGTAGTCACTGCCGTGTGCTGCTCATCACTCCAGGCTTCCTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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| CDS CCA 72 bp | GTGAGCTGCAGCTCGAGGGTGAGAGACCATCCTGTGTaGCTGTCTGTGAACCATCATAGAGGTGGCTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VSCSSRVRDHPV*LSVNHHRGGFP Trigger: AGGAAAGCCACCTCTATGATGGTTCACAGACAGCCACACAGGATGGTCTCTCACCCTCGAGCTGCAGCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000175765.8 ENSMUST00000176021.8 ENSMUST00000176531.8 ENSMUST00000176611.2 ENSMUST00000176685.8 ENSMUST00000177129.8 |
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