RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIPIN (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032397

Ensembl transcript IDs: ENSMUST00000034964.7, ENSMUST00000216594.2

Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCATTACGGGTGGTTGTGAGCCACCCTGTGGAACTCAGGACCTTTaGAAGAGCCATCAGTGCTCTTATCCACTGAGCCATCTTGCCAGT +
Preference number: 1 (lower is better)
Translates to: LITGGCEPPCGTQDL*KSHQCSYPLSHLAS
Trigger: ACTGGCAAGATGGCTCAGTGGATAAGAGCACTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGCTCACAACCACCCGTAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
3UTR TCA 90 bp GTGGAACTCAGGACCTTTGGAAGAGCCATCAGTGCTCTTATCCACTaGGCCATCTTGCCAGTCCCAGTATCAACCTTTTATGTGATCTTT +
Preference number: 1 (lower is better)
Translates to: VELRTFGRAISALIH*AILPVPVSTFYVIF
Trigger: AAAGATCACATAAAAGGTTGATACTGGGACTGGCAAGATGGCTCAGTGGATAAGAGCACTGATGGCTCTTCCAAAGGTCCTGAGTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
3UTR TCA 90 bp TGGCACAGACCTTTAACCCCAACACAAAGCAGCCTTCAAACCAGCTaGGATTGCAGTGAGACAGACTGTTCCAATAATGATATGAAAGAA +
Preference number: 1 (lower is better)
Translates to: WHRPLTPTQSSLQTS*DCSETDCSNNDMKE
Trigger: TTCTTTCATATCATTATTGGAACAGTCTGTCTCACTGCAATCTCAGCTGGTTTGAAGGCTGCTTTGTGTTGGGGTTAAAGGTCTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
3UTR TCA 90 bp AAACCAGCTGAGATTGCAGTGAGACAGACTGTTCCAATAATGATATaGAAGAAAAGACCAGATGATGTACACAGCTGTCACACAGAGCAT +
Preference number: 1 (lower is better)
Translates to: KPAEIAVRQTVPIMI*KKRPDDVHSCHTEH
Trigger: ATGCTCTGTGTGACAGCTGTGTACATCATCTGGTCTTTTCTTTCATATCATTATTGGAACAGTCTGTCTCACTGCAATCTCAGCTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
3UTR TCA 90 bp AGTGAGACAGACTGTTCCAATAATGATATGAAAGAAAAGACCAGATaGTGTACACAGCTGTCACACAGAGCATTTGAAGGCAGAAAAAGC +
Preference number: 1 (lower is better)
Translates to: SETDCSNNDMKEKTR*CTQLSHRAFEGRKS
Trigger: GCTTTTTCTGCCTTCAAATGCTCTGTGTGACAGCTGTGTACATCATCTGGTCTTTTCTTTCATATCATTATTGGAACAGTCTGTCTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
3UTR-3UTR TCA 90 bp ACGGGTGGTTGTGAGCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGGACTCTGTAGCAAGATaGGTGTTGTGGCACAGACCT +
Preference number: 2 (lower is better)
Translates to: TGGCEPPCGTQDLWKSHQDSVAR*VLWHRP
Trigger: AGGTCTGTGCCACAACACTCATCTTGCTACAGAGTC...CTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGCTCACAACCACCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
3UTR-3UTR TCA 90 bp ACGGGTGGTTGTGAGCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGGTCACACAGAGCATTTaGAGGCAGAAAAAGCAGGAC +
Preference number: 2 (lower is better)
Translates to: TGGCEPPCGTQDLWKSHQVTQSI*RQKKQD
Trigger: GTCCTGCTTTTTCTGCCTTCAAATGCTCTGTGTGAC...CTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGCTCACAACCACCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
3UTR-3UTR TCA 90 bp GCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGTGCTCTTATCCACTGAAAAAGCAGGACATTaGCCTCTAATTTCAGACCAG +
Preference number: 2 (lower is better)
Translates to: ATLWNSGPLEEPSVLLSTEKAGH*PLISDQ
Trigger: CTGGTCTGAAATTAGAGGTCAATGTCCTGCTTTTTC...AGTGGATAAGAGCACTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
3UTR-3UTR TCA 90 bp GCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGTGCTCTTATCCACTAAAGAAAAGACCAGATaGTGTACACAGCTGTCACAC +
Preference number: 2 (lower is better)
Translates to: ATLWNSGPLEEPSVLLSTKEKTR*CTQLSH
Trigger: GTGTGACAGCTGTGTACATCATCTGGTCTTTTCTTT...AGTGGATAAGAGCACTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
3UTR CCA 72 bp GGTGGTTGTGAGCCACCCTGTGGAACTCAGGACCTTTaGAAGAGCCATCAGTGCTCTTATCCACTGAGCCAT +
Preference number: 3 (lower is better)
Translates to: GGCEPPCGTQDL*KSHQCSYPLSH
Trigger: ATGGCTCAGTGGATAAGAGCACTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGCTCACAACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
3UTR-3UTR CAA 90 bp ACGGGTGGTTGTGAGCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGAGAAAAAGCAGGACATaGACCTCTAATTTCAGACCA +
Preference number: 3 (lower is better)
Translates to: TGGCEPPCGTQDLWKSHQRKSRT*TSNFRP
Trigger: TGGTCTGAAATTAGAGGTCAATGTCCTGCTTTTTCT...CTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGCTCACAACCACCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
3UTR TCA 72 bp GACTGTTCCAATAATGATATGAAAGAAAAGACCAGATaGTGTACACAGCTGTCACACAGAGCATTTGAAGGC +
Preference number: 3 (lower is better)
Translates to: DCSNNDMKEKTR*CTQLSHRAFEG
Trigger: GCCTTCAAATGCTCTGTGTGACAGCTGTGTACATCATCTGGTCTTTTCTTTCATATCATTATTGGAACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
CDS-3UTR TCA 90 bp CGGGTGGTTGTGAGCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGTAGGTACTCCACTCCCTaGTCCTTCCTCAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: RVVVSHPVELRTFGRAISRYSTP*SFLRFS
Trigger: GCTGAACCTGAGGAAGGATCAGGGAGTGGAGTACCT...ACTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGCTCACAACCACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
CDS-3UTR CCA 90 bp GCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGTGCTCTTATCCACTTGCAGGATCTCTCTCTaGCGAGGCCGGAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: ATLWNSGPLEEPSVLLSTCRISL*RGRRWE
Trigger: TTCCCACCTCCGGCCTCGCCAGAGAGAGATCCTGCA...AGTGGATAAGAGCACTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
CDS-3UTR GCA 90 bp CGGGTGGTTGTGAGCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGTCAGTTGTGTCTCCTCTaGTTTGCACTGTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RVVVSHPVELRTFGRAISQLCLL*FALFLF
Trigger: GAAGAGGAACAGTGCAAAGCAGAGGAGACACAACTG...ACTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGCTCACAACCACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
CDS-3UTR TCA 90 bp ACGGGTGGTTGTGAGCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGCCATTTGACTCTTCTTaGTCCTCACCAGTACTGTTC +
Preference number: 4 (lower is better)
Translates to: TGGCEPPCGTQDLWKSHQPFDSS*SSPVLF
Trigger: GAACAGTACTGGTGAGGATCAAGAAGAGTCAAATGG...CTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGCTCACAACCACCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
CDS-3UTR GCA 90 bp CGGGTGGTTGTGAGCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGTCAGAAGCAAACTTCCTaGTGTCAGAAGAACTTGTCA +
Preference number: 4 (lower is better)
Translates to: RVVVSHPVELRTFGRAISQKQTS*CQKNLS
Trigger: TGACAAGTTCTTCTGACAGCAGGAAGTTTGCTTCTG...ACTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGCTCACAACCACCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
CDS-3UTR GCA 90 bp GCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGTGCTCTTATCCACTGTGTCTCCTCTGCTTTaGACTGTTCCTCTTCATGTG +
Preference number: 4 (lower is better)
Translates to: ATLWNSGPLEEPSVLLSTVSPLL*TVPLHV
Trigger: CACATGAAGAGGAACAGTGCAAAGCAGAGGAGACAC...AGTGGATAAGAGCACTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
CDS-3UTR CCA 90 bp CGGGTGGTTGTGAGCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGTTTTAACTGTTCTCTTTaGCGGAACAGGTACTCCACT +
Preference number: 4 (lower is better)
Translates to: RVVVSHPVELRTFGRAISFNCSL*RNRYST
Trigger: AGTGGAGTACCTGTTCCGCCAAAGAGAACAGTTAAA...ACTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGCTCACAACCACCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
CDS-3UTR CCA 90 bp GCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGTGCTCTTATCCACTCTTCAAATTGCAGCTTaGGGAATAGCCTATGTGCCC +
Preference number: 4 (lower is better)
Translates to: ATLWNSGPLEEPSVLLSTLQIAA*GIAYVP
Trigger: GGGCACATAGGCTATTCCCCAAGCTGCAATTTGAAG...AGTGGATAAGAGCACTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
CDS-3UTR CCA 90 bp TTACGGGTGGTTGTGAGCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCGAAAGGAACATCATGTaGACCATCAGCAGTGTCTAT +
Preference number: 4 (lower is better)
Translates to: LRVVVSHPVELRTFGRAIERNIM*TISSVY
Trigger: ATAGACACTGCTGATGGTCCACATGATGTTCCTTTC...GATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGCTCACAACCACCCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
CDS-3UTR TCA 90 bp ACGGGTGGTTGTGAGCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGCGTTTTAAACAGGTCTaGACCTCCTTTTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: TGGCEPPCGTQDLWKSHQRFKQV*TSFLFP
Trigger: AGGAAATAAAAAGGAGGTTCAGACCTGTTTAAAACG...CTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGCTCACAACCACCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
3UTR CAA 72 bp GCCTTCATATGGTTGTTGGGATTTGAATTTAGGACTTaGGCTAGCTCCGGTCAATTCCGCTCACTTCAACCC +
Preference number: 4 (lower is better)
Translates to: AFIWLLGFEFRT*ASSGQFRSLQP
Trigger: GGGTTGAAGTGAGCGGAATTGACCGGAGCTAGCCAAAGTCCTAAATTCAAATCCCAACAACCATATGAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
CDS-3UTR CAA 90 bp CGGGTGGTTGTGAGCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGTTCTTCAAATTGCAGCTaGGGGAATAGCCTATGTGCC +
Preference number: 5 (lower is better)
Translates to: RVVVSHPVELRTFGRAISSSNCS*GNSLCA
Trigger: GGCACATAGGCTATTCCCCAAGCTGCAATTTGAAGA...ACTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGCTCACAACCACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
CDS-3UTR CAA 90 bp CGGGTGGTTGTGAGCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGTTGTGTCTCCTCTGCTTaGCACTGTTCCTCTTCATGT +
Preference number: 5 (lower is better)
Translates to: RVVVSHPVELRTFGRAISCVSSA*HCSSSC
Trigger: ACATGAAGAGGAACAGTGCAAAGCAGAGGAGACACA...ACTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGCTCACAACCACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
CDS-3UTR CAA 90 bp TTACGGGTGGTTGTGAGCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCGTTAGTATGGTCCAGTaGTGTCTCCTCTGCTTTGCA +
Preference number: 5 (lower is better)
Translates to: LRVVVSHPVELRTFGRAIVSMVQ*CLLCFA
Trigger: TGCAAAGCAGAGGAGACACAACTGGACCATACTAAC...GATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGCTCACAACCACCCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
CDS-3UTR CAA 90 bp GCCACCCTGTGGAACTCAGGACCTTTGGAAGAGCCATCAGTGCTCTTATCCACTTGCTGTCAGAAGAACTaGTCAAGAAGGGATCAAATC +
Preference number: 5 (lower is better)
Translates to: ATLWNSGPLEEPSVLLSTCCQKN*SRRDQI
Trigger: GATTTGATCCCTTCTTGACAAGTTCTTCTGACAGCA...AGTGGATAAGAGCACTGATGGCTCTTCCAAAGGTCCTGAGTTCCACAGGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216594.2
CDS CCA 90 bp CCAGTTGTGTCTCCTCTGCTTTGCACTGTTCCTCTTCATGTGTACTaGCGAAAGGAACATCATGTGGACCATCAGCAGTGTCTATGTTTA +
Preference number: 5 (lower is better)
Translates to: PVVSPLLCTVPLHVY*RKEHHVDHQQCLCL
Trigger: TAAACATAGACACTGCTGATGGTCCACATGATGTTCCTTTCGCCAGTACACATGAAGAGGAACAGTGCAAAGCAGAGGAGACACAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034964.7
ENSMUST00000216594.2
CDS CCA 72 bp TCTCCTCTGCTTTGCACTGTTCCTCTTCATGTGTACTaGCGAAAGGAACATCATGTGGACCATCAGCAGTGT +
Preference number: 6 (lower is better)
Translates to: SPLLCTVPLHVY*RKEHHVDHQQC
Trigger: ACACTGCTGATGGTCCACATGATGTTCCTTTCGCCAGTACACATGAAGAGGAACAGTGCAAAGCAGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034964.7
ENSMUST00000216594.2
CDS CAA 72 bp TCTAAGTTAGTATGGTCCAGTTGTGTCTCCTCTGCTTaGCACTGTTCCTCTTCATGTGTACTGGCGAAAGGA +
Preference number: 6 (lower is better)
Translates to: SKLVWSSCVSSA*HCSSSCVLAKG
Trigger: TCCTTTCGCCAGTACACATGAAGAGGAACAGTGCAAAGCAGAGGAGACACAACTGGACCATACTAACTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034964.7
ENSMUST00000216594.2