Pregenerated sensors for TIPARP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034640Ensembl transcript IDs: ENSMUST00000047906.10, ENSMUST00000130705.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTCAGCCACGAAATCCAGTGCATCTGGCAAAGCAGGCATGGGGTaGGCTTGTTGTCTTGAACAATTCAACTCAGCAGATATGGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: QSATKSSASGKAGMG*ACCLEQFNSADMAK Trigger: CTTAGCCATATCTGCTGAGTTGAATTGTTCAAGACAACAAGCTCACCCCATGCCTGCTTTGCCAGATGCACTGGATTTCGTGGCTGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR CCA 90 bp | CTGAGGCAACAGCACATTCACCTAACAGTGCTCTTGCTGGGCCAGTaGCACCGTTTCCAAGTTTGTGTTTCTATTAAAGTAAGTAGTGTA | + |
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Preference number: 1 (lower is better) Translates to: LRQQHIHLTVLLLGQ*HRFQVCVSIKVSSV Trigger: TACACTACTTACTTTAATAGAAACACAAACTTGGAAACGGTGCCACTGGCCCAGCAAGAGCACTGTTAGGTGAATGTGCTGTTGCCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR TCA 90 bp | GAAACTAAGGTAGGCAACAGTGAAAGAGGCTGGGTTTTCCATGGCTaGATGTTAACACATGTATCACACGTAACAATCAGGGAATTTTGC | + |
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Preference number: 1 (lower is better) Translates to: ETKVGNSERGWVFHG*MLTHVSHVTIREFC Trigger: GCAAAATTCCCTGATTGTTACGTGTGATACATGTGTTAACATTCAGCCATGGAAAACCCAGCCTCTTTCACTGTTGCCTACCTTAGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR GCA 90 bp | GTCAAATGCTGTTTCCTTCCCAGTCCCACCCAAACCTGCTACAAATaGTGGATTGAGTTCATATCAAATAACTTAGTAGTACCAAGATTT | + |
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Preference number: 1 (lower is better) Translates to: VKCCFLPSPTQTCYK*WIEFISNNLVVPRF Trigger: AAATCTTGGTACTACTAAGTTATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAAGGAAACAGCATTTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR GCA 90 bp | CCTATTTCTGTCAAATGCTGTTTCCTTCCCAGTCCCACCCAAACCTaGTACAAATGCTGGATTGAGTTCATATCAAATAACTTAGTAGTA | + |
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Preference number: 1 (lower is better) Translates to: PISVKCCFLPSPTQT*YKCWIEFISNNLVV Trigger: TACTACTAAGTTATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAAGGAAACAGCATTTGACAGAAATAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR CCA 90 bp | ACTTACATGAACGTATACTACCCCGAAGTACCATACAAAATGCTTTaGCTAGGTAATAAGCACGATAGTATCAGTTCCAGGTGGTTTATC | + |
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Preference number: 1 (lower is better) Translates to: TYMNVYYPEVPYKML*LGNKHDSISSRWFI Trigger: GATAAACCACCTGGAACTGATACTATCGTGCTTATTACCTAGCCAAAGCATTTTGTATGGTACTTCGGGGTAGTATACGTTCATGTAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR TCA 90 bp | ATTGTCTGCAAAATAAACAGTCATTCTTTTCTTGTGACTTACAGTTaGAAACTAGGTAATATACTTCCTCCATTCCCAAGCAGAAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: IVCKINSHSFLVTYS*KLGNILPPFPSRRG Trigger: TCCTCTTCTGCTTGGGAATGGAGGAAGTATATTACCTAGTTTTCAACTGTAAGTCACAAGAAAAGAATGACTGTTTATTTTGCAGACAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR-3UTR TCA 90 bp | CACATTCACCTAACAGTGCTCTTGCTGGGCCAGTGGCACCGTTTCCAAGTTTGTAGAGTCTGTCTTGTGTaGAGCACAGGACGCAACCTT | + |
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Preference number: 2 (lower is better) Translates to: HIHLTVLLLGQWHRFQVCRVCLV*STGRNL Trigger: AAGGTTGCGTCCTGTGCTTCACACAAGACAGACTCT...ACAAACTTGGAAACGGTGCCACTGGCCCAGCAAGAGCACTGTTAGGTGAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR-3UTR GCA 90 bp | CACATTCACCTAACAGTGCTCTTGCTGGGCCAGTGGCACCGTTTCCAAGTTTGTAGTCCCACCCAAACCTaGTACAAATGCTGGATTGAG | + |
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Preference number: 2 (lower is better) Translates to: HIHLTVLLLGQWHRFQVCSPTQT*YKCWIE Trigger: CTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACT...ACAAACTTGGAAACGGTGCCACTGGCCCAGCAAGAGCACTGTTAGGTGAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR CAA 90 bp | TACCGCTCTGAACTGAGGCAACAGCACATTCACCTAACAGTGCTCTaGCTGGGCCAGTGGCACCGTTTCCAAGTTTGTGTTTCTATTAAA | + |
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Preference number: 2 (lower is better) Translates to: YRSELRQQHIHLTVL*LGQWHRFQVCVSIK Trigger: TTTAATAGAAACACAAACTTGGAAACGGTGCCACTGGCCCAGCAAGAGCACTGTTAGGTGAATGTGCTGTTGCCTCAGTTCAGAGCGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR-3UTR TCA 90 bp | GTAAGTAGTGTAAGGTACAGTCAGCCACGAAATCCAGTGCATCTGGCAAAGCAGCCTCTGAATAGATCCTaGGTTCTCAGGAAAATTCTG | + |
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Preference number: 2 (lower is better) Translates to: VSSVRYSQPRNPVHLAKQPLNRS*VLRKIL Trigger: CAGAATTTTCCTGAGAACTCAGGATCTATTCAGAGG...CTGCTTTGCCAGATGCACTGGATTTCGTGGCTGACTGTACCTTACACTACTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTCATAGCCTCTTTGTTTTGACCAAACTTCTACCAGACCCAAGCAACGTTCCTATTTCTGTCAAATaGTGTTTCCTTCCCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: FAHSLFVLTKLLPDPSNVPISVK*CFLPSP Trigger: GGGACTGGGAAGGAAACAGCATTTGACAGAAATAGG...AACGTTGCTTGGGTCTGGTAGAAGTTTGGTCAAAACAAAGAGGCTATGAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR-3UTR GCA 90 bp | CAAGCAGAAGAGGATAAGCAACATATTCTGAATAGATCTGTTCAGATTCAATCCAATGACTGCCACAGTTaGCCATTTCCTCCTGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: QAEEDKQHILNRSVQIQSNDCHS*PFPPAN Trigger: ATTGGCAGGAGGAAATGGGCAACTGTGGCAGTCATT...GGATTGAATCTGAACAGATCTATTCAGAATATGTTGCTTATCCTCTTCTGCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR-3UTR GCA 90 bp | CAAGCAATGGTAACATGTCTTAACTTGAAAACAACTGGGGTCACTGGTTTACAAGGAAGCCCTGATAAGTaGTTAAACAGACTGATTCAC | + |
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Preference number: 2 (lower is better) Translates to: QAMVTCLNLKTTGVTGLQGSPDK*LNRLIH Trigger: GTGAATCAGTCTGTTTAAGCACTTATCAGGGCTTCC...TTGTAAACCAGTGACCCCAGTTGTTTTCAAGTTAAGACATGTTACCATTGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR-3UTR TCA 90 bp | CAAGCAGAAGAGGATAAGCAACATATTCTGAATAGATCTGTTCAGATTCAATCCAACAGACTGATTCACTaGGACATCTGTACAGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: QAEEDKQHILNRSVQIQSNRLIH*DICTAL Trigger: TAGAGCTGTACAGATGTCTCAGTGAATCAGTCTGTT...GGATTGAATCTGAACAGATCTATTCAGAATATGTTGCTTATCCTCTTCTGCTTG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR-3UTR CCA 90 bp | TTATCAACAACCACTTTTCACTTCACTCAGGTTTCTGCTTTGCTTAGAAGTACTAGGCTGGGTTTTCCATaGCTGAATGTTAACACATGT | + |
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Preference number: 2 (lower is better) Translates to: LSTTTFHFTQVSALLRSTRLGFP*LNVNTC Trigger: ACATGTGTTAACATTCAGCCATGGAAAACCCAGCCT...AGTACTTCTAAGCAAAGCAGAAACCTGAGTGAAGTGAAAAGTGGTTGTTGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR-3UTR TCA 90 bp | GTGATATATTTCAGTCCTGGTCACAGAATGAAAATTTCTTACCACCTATTAGACATAGCCTCTTTGTTTTaGCCAAACTTCTACCAGACC | + |
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Preference number: 2 (lower is better) Translates to: VIYFSPGHRMKISYHLLDIASLF*PNFYQT Trigger: GGTCTGGTAGAAGTTTGGTCAAAACAAAGAGGCTAT...GTCTAATAGGTGGTAAGAAATTTTCATTCTGTGACCAGGACTGAAATATATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR-3UTR TCA 90 bp | CAAGCAGAAGAGGATAAGCAACATATTCTGAATAGATCTGTTCAGATTCAATCCGTCCTGGTCACAGAATaGAAATTTCTTACCACCTAT | + |
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Preference number: 2 (lower is better) Translates to: QAEEDKQHILNRSVQIQSVLVTE*KFLTTY Trigger: ATAGGTGGTAAGAAATTTTCATTCTGTGACCAGGAC...GGATTGAATCTGAACAGATCTATTCAGAATATGTTGCTTATCCTCTTCTGCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR-3UTR GCA 90 bp | TTATCAACAACCACTTTTCACTTCACTCAGGTTTCTGCTTTGCTTAGAAGTACTCAAACCTGCTACAAATaGTGGATTGAGTTCATATCA | + |
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Preference number: 2 (lower is better) Translates to: LSTTTFHFTQVSALLRSTQTCYK*WIEFIS Trigger: TGATATGAACTCAATCCAGCATTTGTAGCAGGTTTG...AGTACTTCTAAGCAAAGCAGAAACCTGAGTGAAGTGAAAAGTGGTTGTTGATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR-3UTR CCA 90 bp | CAAGCAGAAGAGGATAAGCAACATATTCTGAATAGATCTGTTCAGATTCAATCCCCATACAAAATGCTTTaGCTAGGTAATAAGCACGAT | + |
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Preference number: 2 (lower is better) Translates to: QAEEDKQHILNRSVQIQSPYKML*LGNKHD Trigger: ATCGTGCTTATTACCTAGCCAAAGCATTTTGTATGG...GGATTGAATCTGAACAGATCTATTCAGAATATGTTGCTTATCCTCTTCTGCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR TCA 72 bp | ACGAAATCCAGTGCATCTGGCAAAGCAGGCATGGGGTaGGCTTGTTGTCTTGAACAATTCAACTCAGCAGAT | + |
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Preference number: 3 (lower is better) Translates to: TKSSASGKAGMG*ACCLEQFNSAD Trigger: ATCTGCTGAGTTGAATTGTTCAAGACAACAAGCTCACCCCATGCCTGCTTTGCCAGATGCACTGGATTTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR CCA 72 bp | CAGCACATTCACCTAACAGTGCTCTTGCTGGGCCAGTaGCACCGTTTCCAAGTTTGTGTTTCTATTAAAGTA | + |
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Preference number: 3 (lower is better) Translates to: QHIHLTVLLLGQ*HRFQVCVSIKV Trigger: TACTTTAATAGAAACACAAACTTGGAAACGGTGCCACTGGCCCAGCAAGAGCACTGTTAGGTGAATGTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR TCA 72 bp | TTTCTGCTTTGCTTAGAAGTACTTACTATACCGCTCTaGACTGAGGCAACAGCACATTCACCTAACAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: FLLCLEVLTIPL*TEATAHSPNSA Trigger: AGCACTGTTAGGTGAATGTGCTGTTGCCTCAGTTCAGAGCGGTATAGTAAGTACTTCTAAGCAAAGCAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR TCA 72 bp | GAAAACAACTGGGGTCACTGGTTTACAAGTTATAACTaGATGAATGACTGCCACAGTTGCCCATTTCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: ENNWGHWFTSYN*MNDCHSCPFPP Trigger: AGGAGGAAATGGGCAACTGTGGCAGTCATTCATTCAGTTATAACTTGTAAACCAGTGACCCCAGTTGTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR GCA 72 bp | GTCAAATGCTGTTTCCTTCCCAGTCCCACCCAAACCTaGTACAAATGCTGGATTGAGTTCATATCAAATAAC | + |
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Preference number: 3 (lower is better) Translates to: VKCCFLPSPTQT*YKCWIEFISNN Trigger: GTTATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAAGGAAACAGCATTTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR GCA 72 bp | AAAATTGGGTCTGAAAAGTATCCTATTTCTGTCAAATaGTGTTTCCTTCCCAGTCCCACCCAAACCTGCTAC | + |
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Preference number: 3 (lower is better) Translates to: KIGSEKYPISVK*CFLPSPTQTCY Trigger: GTAGCAGGTTTGGGTGGGACTGGGAAGGAAACAGCATTTGACAGAAATAGGATACTTTTCAGACCCAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR TCA 72 bp | AACAGAACCCTCACTTTGCTCATAGCCTCTTTGTTTTaGCCAAACTTCTACCAGACCCAAGCAACGTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: NRTLTLLIASLF*PNFYQTQATFK Trigger: TTTAAACGTTGCTTGGGTCTGGTAGAAGTTTGGTCAAAACAAAGAGGCTATGAGCAAAGTGAGGGTTCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR CCA 72 bp | TTCCTTCCCAGTCCCACCCAAACCTGCTACAAATGCTaGATTGAGTTCATATCAAATAACTTAGTAGTACCA | + |
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Preference number: 3 (lower is better) Translates to: FLPSPTQTCYKC*IEFISNNLVVP Trigger: TGGTACTACTAAGTTATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR CCA 72 bp | AACGTATACTACCCCGAAGTACCATACAAAATGCTTTaGCTAGGTAATAAGCACGATAGTATCAGTTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: NVYYPEVPYKML*LGNKHDSISSR Trigger: CCTGGAACTGATACTATCGTGCTTATTACCTAGCCAAAGCATTTTGTATGGTACTTCGGGGTAGTATACGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR-3UTR CAA 90 bp | CAAGCAATGGTAACATGTCTTAACTTGAAAACAACTGGGGTCACTGGTTTACAAAACAGAACCCTCACTTaGCTCATAGCCTCTTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: QAMVTCLNLKTTGVTGLQNRTLT*LIASLF Trigger: AAACAAAGAGGCTATGAGCAAAGTGAGGGTTCTGTT...TTGTAAACCAGTGACCCCAGTTGTTTTCAAGTTAAGACATGTTACCATTGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR GCA 72 bp | TGTTTCCTTCCCAGTCCCACCCAAACCTGCTACAAATaGTGGATTGAGTTCATATCAAATAACTTAGTAGTA | + |
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Preference number: 3 (lower is better) Translates to: CFLPSPTQTCYK*WIEFISNNLVV Trigger: TACTACTAAGTTATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAAGGAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR TCA 72 bp | TCCATTCCCAAGCAGAAGAGGATAAGCAACATATTCTaGATAGATCTGTTCAGATTCAATCCTACAGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: SIPKQKRISNIF*IDLFRFNPTVF Trigger: GAAGACTGTAGGATTGAATCTGAACAGATCTATTCAGAATATGTTGCTTATCCTCTTCTGCTTGGGAATGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| 3UTR TCA 72 bp | ACTAATATTGCTGCTGTCTATATGTACAAGTGTGAATaGAGAATATGCACTTTAGTCTTTTCCACACCAAGT | + |
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Preference number: 3 (lower is better) Translates to: TNIAAVYMYKCE*RICTLVFSTPS Trigger: ACTTGGTGTGGAAAAGACTAAAGTGCATATTCTTCATTCACACTTGTACATATAGACAGCAGCAATATTAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR TCA 90 bp | CACATTCACCTAACAGTGCTCTTGCTGGGCCAGTGGCACCGTTTCCAAGTTTGTAGGGTAAAAGTTGGCTaGAGTTACTCCATCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: HIHLTVLLLGQWHRFQVCRVKVG*SYSIWA Trigger: TGCCCAGATGGAGTAACTTCAGCCAACTTTTACCCT...ACAAACTTGGAAACGGTGCCACTGGCCCAGCAAGAGCACTGTTAGGTGAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR CCA 90 bp | CACATTCACCTAACAGTGCTCTTGCTGGGCCAGTGGCACCGTTTCCAAGTTTGTTGCGCTTCTGGTAATTaGCCCTCAACATTTGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: HIHLTVLLLGQWHRFQVCCASGN*PSTFVP Trigger: TGGGACAAATGTTGAGGGCCAATTACCAGAAGCGCA...ACAAACTTGGAAACGGTGCCACTGGCCCAGCAAGAGCACTGTTAGGTGAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR TCA 90 bp | TTCCCAGTCCCACCCAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAAGAGGCAGAGAAGCCTaGGTGGGAACCCCACCAAGT | + |
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Preference number: 4 (lower is better) Translates to: FPVPPKPATNAGLSSYQIRGREA*VGTPPS Trigger: ACTTGGTGGGGTTCCCACTCAGGCTTCTCTGCCTCT...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR GCA 90 bp | CACATTCACCTAACAGTGCTCTTGCTGGGCCAGTGGCACCGTTTCCAAGTTTGTAATCCCTGCCATAAATaGAAGTGCCTTGCAGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: HIHLTVLLLGQWHRFQVCNPCHK*KCLAES Trigger: ACTTTCTGCAAGGCACTTGCATTTATGGCAGGGATT...ACAAACTTGGAAACGGTGCCACTGGCCCAGCAAGAGCACTGTTAGGTGAATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR GCA 90 bp | TTCCCAGTCCCACCCAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAGAGGGGGCCTTCTCATaGCATGACTGCCCATTGTGT | + |
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Preference number: 4 (lower is better) Translates to: FPVPPKPATNAGLSSYQIEGAFS*HDCPLC Trigger: ACACAATGGGCAGTCATGGCATGAGAAGGCCCCCTC...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR CCA 90 bp | CACATTCACCTAACAGTGCTCTTGCTGGGCCAGTGGCACCGTTTCCAAGTTTGTACTGATGGTTTCTGGTaGAAAACTGTGGTCTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: HIHLTVLLLGQWHRFQVCTDGFW*KTVVLD Trigger: ATCCAAGACCACAGTTTTCCACCAGAAACCATCAGT...ACAAACTTGGAAACGGTGCCACTGGCCCAGCAAGAGCACTGTTAGGTGAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR CCA 90 bp | TTCCCAGTCCCACCCAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAGCAGAGAAGCCTGAGTaGGAACCCCACCAAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: FPVPPKPATNAGLSSYQIAEKPE*EPHQVS Trigger: AGACACTTGGTGGGGTTCCCACTCAGGCTTCTCTGC...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR TCA 90 bp | CACATTCACCTAACAGTGCTCTTGCTGGGCCAGTGGCACCGTTTCCAAGTTTGTGTGGTAAATAGAGTTTaGATTACTACAGGGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: HIHLTVLLLGQWHRFQVCVVNRV*ITTGWC Trigger: ACACCACCCTGTAGTAATTCAAACTCTATTTACCAC...ACAAACTTGGAAACGGTGCCACTGGCCCAGCAAGAGCACTGTTAGGTGAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR GCA 90 bp | GTAAGTAGTGTAAGGTACAGTCAGCCACGAAATCCAGTGCATCTGGCAAAGCAGCATGGCATTCAAATCTaGCCAAAAGTCTTGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VSSVRYSQPRNPVHLAKQHGIQI*PKVLSS Trigger: GGAGGACAAGACTTTTGGGCAGATTTGAATGCCATG...CTGCTTTGCCAGATGCACTGGATTTCGTGGCTGACTGTACCTTACACTACTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR CCA 90 bp | CACATTCACCTAACAGTGCTCTTGCTGGGCCAGTGGCACCGTTTCCAAGTTTGTGACAGCCTTCGTAGTTaGTCAAATTCAGTTGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: HIHLTVLLLGQWHRFQVCDSLRS*SNSVVS Trigger: TGAAACAACTGAATTTGACCAACTACGAAGGCTGTC...ACAAACTTGGAAACGGTGCCACTGGCCCAGCAAGAGCACTGTTAGGTGAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR CCA 90 bp | CACATTCACCTAACAGTGCTCTTGCTGGGCCAGTGGCACCGTTTCCAAGTTTGTTCTCTCCATCCAAAGTaGTCTCTACAGAAGAATTTC | + |
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Preference number: 4 (lower is better) Translates to: HIHLTVLLLGQWHRFQVCSLHPK*SLQKNF Trigger: GAAATTCTTCTGTAGAGACCACTTTGGATGGAGAGA...ACAAACTTGGAAACGGTGCCACTGGCCCAGCAAGAGCACTGTTAGGTGAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR GCA 90 bp | GTAAGTAGTGTAAGGTACAGTCAGCCACGAAATCCAGTGCATCTGGCAAAGCAGCGGGGATCAAAGTTGTaGTTGCAAATTCCATCTACT | + |
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Preference number: 4 (lower is better) Translates to: VSSVRYSQPRNPVHLAKQRGSKL*LQIPST Trigger: AGTAGATGGAATTTGCAAGCACAACTTTGATCCCCG...CTGCTTTGCCAGATGCACTGGATTTCGTGGCTGACTGTACCTTACACTACTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR CCA 90 bp | TTCCCAGTCCCACCCAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATATGGAACCCCCTGTTCTaGAGCATCTGTAGAAGGATG | + |
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Preference number: 4 (lower is better) Translates to: FPVPPKPATNAGLSSYQIWNPLF*SICRRM Trigger: CATCCTTCTACAGATGCTCCAGAACAGGGGGTTCCA...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR TCA 90 bp | CTTCCCAGTCCCACCCAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATCTTTGGCCAAAAACATaGAATGGACTCCTTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSPTQTCYKCWIEFISNLWPKT*NGLLWR Trigger: CCTCCAAAGGAGTCCATTTCATGTTTTTGGCCAAAG...ATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGTCCCACCCAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATATTCTCATGCCATGACTaGCCATTGTGTATCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPVPPKPATNAGLSSYQIFSCHD*PLCICQ Trigger: CTGGCAGATACACAATGGGCAGTCATGGCATGAGAA...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR TCA 90 bp | TTTGCTCATAGCCTCTTTGTTTTGACCAAACTTCTACCAGACCCAAGCAACGTTCTTTCCAAGTGCTCCTaGGAATCATTGGAAACACTC | + |
|
Preference number: 4 (lower is better) Translates to: FAHSLFVLTKLLPDPSNVLSKCS*ESLETL Trigger: GAGTGTTTCCAATGATTCTCAGGAGCACTTGGAAAG...AACGTTGCTTGGGTCTGGTAGAAGTTTGGTCAAAACAAAGAGGCTATGAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR TCA 90 bp | TTTGCTCATAGCCTCTTTGTTTTGACCAAACTTCTACCAGACCCAAGCAACGTTCTCCATCTGGGCAGATaGTTTGTGATGAAGTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FAHSLFVLTKLLPDPSNVLHLGR*FVMKLL Trigger: AAGCAACTTCATCACAAATCATCTGCCCAGATGGAG...AACGTTGCTTGGGTCTGGTAGAAGTTTGGTCAAAACAAAGAGGCTATGAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR GCA 90 bp | CTTCCCAGTCCCACCCAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATTGCCATAAATGCAAGTaGCTTGCAGAAAGTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LPSPTQTCYKCWIEFISNCHKCK*LAESPY Trigger: GTATGGACTTTCTGCAAGGCACTTGCATTTATGGCA...ATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR GCA 90 bp | GTAAGTAGTGTAAGGTACAGTCAGCCACGAAATCCAGTGCATCTGGCAAAGCAGGTTATGAGAGTAGCTTaGCTTCTTTGCGAAATAACT | + |
|
Preference number: 4 (lower is better) Translates to: VSSVRYSQPRNPVHLAKQVMRVA*LLCEIT Trigger: AGTTATTTCGCAAAGAAGGCAAGCTACTCTCATAAC...CTGCTTTGCCAGATGCACTGGATTTCGTGGCTGACTGTACCTTACACTACTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGAAGAGGATAAGCAACATATTCTGAATAGATCTGTTCAGATTCAATCCACTGTGGTCTTGGATTaGAACCCCCTGTTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QAEEDKQHILNRSVQIQSTVVLD*NPLFWS Trigger: GCTCCAGAACAGGGGGTTCCAATCCAAGACCACAGT...GGATTGAATCTGAACAGATCTATTCAGAATATGTTGCTTATCCTCTTCTGCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CCA 90 bp | CTTCCCAGTCCCACCCAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATTCCTCACTTTTGTCTTaGAAGAGCTCAGTACTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPSPTQTCYKCWIEFISNSSLLS*KSSVLN Trigger: GTTGAGTACTGAGCTCTTCCAAGACAAAAGTGAGGA...ATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR TCA 90 bp | GTGATATATTTCAGTCCTGGTCACAGAATGAAAATTTCTTACCACCTATTAGACCTGCCACTGTCCCACTaGTGGTTTCTGGTGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VIYFSPGHRMKISYHLLDLPLSH*WFLVEN Trigger: GTTTTCCACCAGAAACCATCAGTGGGACAGTGGCAG...GTCTAATAGGTGGTAAGAAATTTTCATTCTGTGACCAGGACTGAAATATATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR TCA 90 bp | CAAGCAATGGTAACATGTCTTAACTTGAAAACAACTGGGGTCACTGGTTTACAAAAACAGGCACTTGGATaGAGTCCTGAGATGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: QAMVTCLNLKTTGVTGLQKQALG*SPEMDA Trigger: TGCATCCATCTCAGGACTTCATCCAAGTGCCTGTTT...TTGTAAACCAGTGACCCCAGTTGTTTTCAAGTTAAGACATGTTACCATTGCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR TCA 90 bp | GTGATATATTTCAGTCCTGGTCACAGAATGAAAATTTCTTACCACCTATTAGACGGCCTTCTCATGCCATaGCTGCCCATTGTGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VIYFSPGHRMKISYHLLDGLLMP*LPIVYL Trigger: CAGATACACAATGGGCAGTCATGGCATGAGAAGGCC...GTCTAATAGGTGGTAAGAAATTTTCATTCTGTGACCAGGACTGAAATATATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR GCA 90 bp | CTTCCCAGTCCCACCCAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATGTTTCAAACAATCCCTaGCATAAATGCAAGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPSPTQTCYKCWIEFISNVSNNP*HKCKCL Trigger: AAGGCACTTGCATTTATGGCAGGGATTGTTTGAAAC...ATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR GCA 90 bp | CAAGCAATGGTAACATGTCTTAACTTGAAAACAACTGGGGTCACTGGTTTACAACCAAACATTGTAGCATaGTTTCCACAGACACGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QAMVTCLNLKTTGVTGLQPNIVA*FPQTRG Trigger: TCCCCGTGTCTGTGGAAAGCATGCTACAATGTTTGG...TTGTAAACCAGTGACCCCAGTTGTTTTCAAGTTAAGACATGTTACCATTGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CCA 90 bp | TTTGCTCATAGCCTCTTTGTTTTGACCAAACTTCTACCAGACCCAAGCAACGTTGATGAAGTCCTGAGATaGATGCATATAAACCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: FAHSLFVLTKLLPDPSNVDEVLR*MHINPR Trigger: ACGTGGGTTTATATGCATCCATCTCAGGACTTCATC...AACGTTGCTTGGGTCTGGTAGAAGTTTGGTCAAAACAAAGAGGCTATGAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR TCA 90 bp | TTATCAACAACCACTTTTCACTTCACTCAGGTTTCTGCTTTGCTTAGAAGTACTGAGTGGTTGTCCTTTTaGTCTGCCAATGATAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSTTTFHFTQVSALLRSTEWLSF*SANDRA Trigger: TGCCCTATCATTGGCAGATCAAAAGGACAACCACTC...AGTACTTCTAAGCAAAGCAGAAACCTGAGTGAAGTGAAAAGTGGTTGTTGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR GCA 90 bp | CAAGCAGAAGAGGATAAGCAACATATTCTGAATAGATCTGTTCAGATTCAATCCAGGCATACTGTTTTCTaGTGGTGGACACGATGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QAEEDKQHILNRSVQIQSRHTVF*WWTRWV Trigger: AACCCATCGTGTCCACCAGCAGAAAACAGTATGCCT...GGATTGAATCTGAACAGATCTATTCAGAATATGTTGCTTATCCTCTTCTGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGAAGAGGATAAGCAACATATTCTGAATAGATCTGTTCAGATTCAATCCCTGTACTACACAGTCTaGCTCAGGTTCAGTGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QAEEDKQHILNRSVQIQSLYYTV*LRFSGF Trigger: GAAACCACTGAACCTGAGCCAGACTGTGTAGTACAG...GGATTGAATCTGAACAGATCTATTCAGAATATGTTGCTTATCCTCTTCTGCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CCA 90 bp | CTTCCCAGTCCCACCCAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATCTCTCATCTCTGTTTTaGTCTCTAGCTCTAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LPSPTQTCYKCWIEFISNLSSLF*SLALKT Trigger: AGTTTTTAGAGCTAGAGACCAAAACAGAGATGAGAG...ATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CCA 90 bp | ACCACTTTTCACTTCACTCAGGTTTCTGCTTTGCTTAGAAGTACTTACTATACCACTGTTTTCTGCTGGTaGACACGATGGGTTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTFHFTQVSALLRSTYYTTVFCW*TRWVDF Trigger: GAAATCAACCCATCGTGTCCACCAGCAGAAAACAGT...GGTATAGTAAGTACTTCTAAGCAAAGCAGAAACCTGAGTGAAGTGAAAAGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CCA 90 bp | GTGATATATTTCAGTCCTGGTCACAGAATGAAAATTTCTTACCACCTATTAGACTCTGGTGGAAAACTGTaGTCTTGGATTGGAACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VIYFSPGHRMKISYHLLDSGGKL*SWIGTP Trigger: GGGGGTTCCAATCCAAGACCACAGTTTTCCACCAGA...GTCTAATAGGTGGTAAGAAATTTTCATTCTGTGACCAGGACTGAAATATATCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CCA 90 bp | CTTCCCAGTCCCACCCAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATGTATGGTACTGTAGCTaGTTTACAAGTTCAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: LPSPTQTCYKCWIEFISNVWYCS*FTSSNT Trigger: TGTGTTTGAACTTGTAAACCAGCTACAGTACCATAC...ATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CCA 90 bp | ACCACTTTTCACTTCACTCAGGTTTCTGCTTTGCTTAGAAGTACTTACTATACCTCAGACCCCGAGAGTTaGCTTCTTCAATTAGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: TTFHFTQVSALLRSTYYTSDPES*LLQLVE Trigger: TTCGACTAATTGAAGAAGCCAACTCTCGGGGTCTGA...GGTATAGTAAGTACTTCTAAGCAAAGCAGAAACCTGAGTGAAGTGAAAAGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR TCA 90 bp | TTATCAACAACCACTTTTCACTTCACTCAGGTTTCTGCTTTGCTTAGAAGTACTTGTAGGAACATCACCTaGAACAGGATGCAAAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSTTTFHFTQVSALLRSTCRNIT*NRMQKV Trigger: GACCTTTTGCATCCTGTTTCAGGTGATGTTCCTACA...AGTACTTCTAAGCAAAGCAGAAACCTGAGTGAAGTGAAAAGTGGTTGTTGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR TCA 90 bp | GTGATATATTTCAGTCCTGGTCACAGAATGAAAATTTCTTACCACCTATTAGACACACTCTGCCACTTCTaGGTGGTTGTCCTTTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VIYFSPGHRMKISYHLLDTLCHF*VVVLLI Trigger: GATCAAAAGGACAACCACTCAGAAGTGGCAGAGTGT...GTCTAATAGGTGGTAAGAAATTTTCATTCTGTGACCAGGACTGAAATATATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR TCA 90 bp | TTTGCTCATAGCCTCTTTGTTTTGACCAAACTTCTACCAGACCCAAGCAACGTTTCTTGGGATGTTCCATaGAATAAGTGTCTCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: FAHSLFVLTKLLPDPSNVSWDVP*NKCLSF Trigger: AAATGAGAGACACTTATTTCATGGAACATCCCAAGA...AACGTTGCTTGGGTCTGGTAGAAGTTTGGTCAAAACAAAGAGGCTATGAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR GCA 90 bp | ACCACTTTTCACTTCACTCAGGTTTCTGCTTTGCTTAGAAGTACTTACTATACCTCACCTGAAACAGGATaGAAAAGGTCAGTTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TTFHFTQVSALLRSTYYTSPETG*KRSVWK Trigger: CTTCCAAACTGACCTTTTGCATCCTGTTTCAGGTGA...GGTATAGTAAGTACTTCTAAGCAAAGCAGAAACCTGAGTGAAGTGAAAAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGAAGAGGATAAGCAACATATTCTGAATAGATCTGTTCAGATTCAATCCCATACTGTTTTCTGCTaGTGGACACGATGGGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QAEEDKQHILNRSVQIQSHTVFC*WTRWVD Trigger: ATCAACCCATCGTGTCCACCAGCAGAAAACAGTATG...GGATTGAATCTGAACAGATCTATTCAGAATATGTTGCTTATCCTCTTCTGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR TCA 90 bp | GTGATATATTTCAGTCCTGGTCACAGAATGAAAATTTCTTACCACCTATTAGACATTCCATTCTCTTGGTaGGTATGGTACTGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VIYFSPGHRMKISYHLLDIPFSW*VWYCSW Trigger: CCAGCTACAGTACCATACTCACCAAGAGAATGGAAT...GTCTAATAGGTGGTAAGAAATTTTCATTCTGTGACCAGGACTGAAATATATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CCA 90 bp | TTATCAACAACCACTTTTCACTTCACTCAGGTTTCTGCTTTGCTTAGAAGTACTTTTCAGGGTAAAAGTTaGCTGAAGTTACTCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSTTTFHFTQVSALLRSTFQGKS*LKLLHL Trigger: CAGATGGAGTAACTTCAGCCAACTTTTACCCTGAAA...AGTACTTCTAAGCAAAGCAGAAACCTGAGTGAAGTGAAAAGTGGTTGTTGATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR GCA 90 bp | CAAGCAGAAGAGGATAAGCAACATATTCTGAATAGATCTGTTCAGATTCAATCCTATGTTCATGTAAGCTaGTCTCATCTCTGTTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QAEEDKQHILNRSVQIQSYVHVS*SHLCFG Trigger: ACCAAAACAGAGATGAGAGCAGCTTACATGAACATA...GGATTGAATCTGAACAGATCTATTCAGAATATGTTGCTTATCCTCTTCTGCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS TCA 90 bp | CTGGTGACACTGCCAGGGTTGACCGGAGGGGGCCTTCTCATGCCATaGCTGCCCATTGTGTATCTGCCAGTTAACACTTTGGCCAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LVTLPGLTGGGLLMP*LPIVYLPVNTLAKN Trigger: GTTTTTGGCCAAAGTGTTAACTGGCAGATACACAATGGGCAGTCATGGCATGAGAAGGCCCCCTCCGGTCAACCCTGGCAGTGTCACCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS CCA 90 bp | CACTGTCCCACTGATGGTTTCTGGTGGAAAACTGTGGTCTTGGATTaGAACCCCCTGTTCTGGAGCATCTGTAGAAGGATGCGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HCPTDGFWWKTVVLD*NPLFWSICRRMRFW Trigger: CCAGAAGCGCATCCTTCTACAGATGCTCCAGAACAGGGGGTTCCAATCCAAGACCACAGTTTTCCACCAGAAACCATCAGTGGGACAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS CCA 90 bp | ACCCCCTGTTCTGGAGCATCTGTAGAAGGATGCGCTTCTGGTAATTaGCCCTCAACATTTGTCCCATCAGGAATCAGGACAGGCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: TPCSGASVEGCASGN*PSTFVPSGIRTGIL Trigger: CAGTATGCCTGTCCTGATTCCTGATGGGACAAATGTTGAGGGCCAATTACCAGAAGCGCATCCTTCTACAGATGCTCCAGAACAGGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS TCA 90 bp | ACGTTTCAGGGTAAAAGTTGGCTGAAGTTACTCCATCTGGGCAGATaGTTTGTGATGAAGTTGCTTCAAGAGGCAGAGAAGCCTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TFQGKSWLKLLHLGR*FVMKLLQEAEKPEW Trigger: CCACTCAGGCTTCTCTGCCTCTTGAAGCAACTTCATCACAAATCATCTGCCCAGATGGAGTAACTTCAGCCAACTTTTACCCTGAAACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CAA 90 bp | CTTCCCAGTCCCACCCAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATTGGAAAACTGTGGTCTaGGATTGGAACCCCCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSPTQTCYKCWIEFISNWKTVV*DWNPLF Trigger: GAACAGGGGGTTCCAATCCAAGACCACAGTTTTCCA...ATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CAA 90 bp | CACATTCACCTAACAGTGCTCTTGCTGGGCCAGTGGCACCGTTTCCAAGTTTGTTGTAAAACTATTGTCTaGGAAAGCTCCTGGTACATA | + |
|
Preference number: 5 (lower is better) Translates to: HIHLTVLLLGQWHRFQVCCKTIV*ESSWYI Trigger: TATGTACCAGGAGCTTTCCAAGACAATAGTTTTACA...ACAAACTTGGAAACGGTGCCACTGGCCCAGCAAGAGCACTGTTAGGTGAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CAA 90 bp | GTAAGTAGTGTAAGGTACAGTCAGCCACGAAATCCAGTGCATCTGGCAAAGCAGATCTGCCCAAAAGTCTaGTCCTCCATACTTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSSVRYSQPRNPVHLAKQICPKV*SSILHS Trigger: AGAATGAAGTATGGAGGACAAGACTTTTGGGCAGAT...CTGCTTTGCCAGATGCACTGGATTTCGTGGCTGACTGTACCTTACACTACTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CAA 90 bp | TTCCCAGTCCCACCCAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATATGCAGAAACAGGCACTaGGATGAAGTCCTGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: FPVPPKPATNAGLSSYQICRNRH*DEVLRW Trigger: CCATCTCAGGACTTCATCCAAGTGCCTGTTTCTGCA...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS GCA 90 bp | TTATCTACGCAGTCAGGACTTGTAGGAACATCACCTGAAACAGGATaGAAAAGGTCAGTTTGGAAGTGTCCTGTTGTAGAATCTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LSTQSGLVGTSPETG*KRSVWKCPVVESAT Trigger: AGTGGCAGATTCTACAACAGGACACTTCCAAACTGACCTTTTGCATCCTGTTTCAGGTGATGTTCCTACAAGTCCTGACTGCGTAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CAA 90 bp | GTAAGTAGTGTAAGGTACAGTCAGCCACGAAATCCAGTGCATCTGGCAAAGCAGATGAAATGGACTCCTTaGGAGGACTTCTTAGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSSVRYSQPRNPVHLAKQMKWTP*EDFLEK Trigger: CTTTTCTAAGAAGTCCTCCAAAGGAGTCCATTTCAT...CTGCTTTGCCAGATGCACTGGATTTCGTGGCTGACTGTACCTTACACTACTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CAA 90 bp | TTTGCTCATAGCCTCTTTGTTTTGACCAAACTTCTACCAGACCCAAGCAACGTTACACGGGGATCAAAGTaGTGCTTGCAAATTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: FAHSLFVLTKLLPDPSNVTRGSK*CLQIPS Trigger: AGATGGAATTTGCAAGCACAACTTTGATCCCCGTGT...AACGTTGCTTGGGTCTGGTAGAAGTTTGGTCAAAACAAAGAGGCTATGAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS TCA 90 bp | ACACGTTTTCAATGGAGAGATCTTCTCAGAAATTCTCATTTGGCATaGAAAGTCATCAGAAGGAGAAGGAGGCTGTACTACACAGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TRFQWRDLLRNSHLA*KVIRRRRRLYYTVW Trigger: CCAGACTGTGTAGTACAGCCTCCTTCTCCTTCTGATGACTTTTCATGCCAAATGAGAATTTCTGAGAAGATCTCTCCATTGAAAACGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS TCA 90 bp | ATCCATAACTTTATCTACGCAGTCAGGACTTGTAGGAACATCACCTaGAACAGGATGCAAAAGGTCAGTTTGGAAGTGTCCTGTTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: IHNFIYAVRTCRNIT*NRMQKVSLEVSCCR Trigger: TCTACAACAGGACACTTCCAAACTGACCTTTTGCATCCTGTTTCAGGTGATGTTCCTACAAGTCCTGACTGCGTAGATAAAGTTATGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS TCA 90 bp | GAGAATCATTGGAAACACTCTGCCACTTCTGAGTGGTTGTCCTTTTaGTCTGCCAATGATAGGGCAATACGGTGTGATGTTTCAAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: ENHWKHSATSEWLSF*SANDRAIRCDVSNN Trigger: ATTGTTTGAAACATCACACCGTATTGCCCTATCATTGGCAGATCAAAAGGACAACCACTCAGAAGTGGCAGAGTGTTTCCAATGATTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047906.10 ENSMUST00000130705.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCAGTCCCACCCAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAGCTCTCATCTCTGTTTaGGTCTCTAGCTCTAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FPVPPKPATNAGLSSYQIALISV*VSSSKN Trigger: GTTTTTAGAGCTAGAGACCAAAACAGAGATGAGAGC...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
||
| CDS-3UTR CAA 90 bp | ACCACTTTTCACTTCACTCAGGTTTCTGCTTTGCTTAGAAGTACTTACTATACCATTGGCCCTCAACATTaGTCCCATCAGGAATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TTFHFTQVSALLRSTYYTIGPQH*SHQESG Trigger: TCCTGATTCCTGATGGGACAAATGTTGAGGGCCAAT...GGTATAGTAAGTACTTCTAAGCAAAGCAGAAACCTGAGTGAAGTGAAAAGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR CAA 90 bp | CTTCCCAGTCCCACCCAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATGGATCAAAGTTGTGCTaGCAAATTCCATCTACTACA | + |
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Preference number: 5 (lower is better) Translates to: LPSPTQTCYKCWIEFISNGSKLC*QIPSTT Trigger: TGTAGTAGATGGAATTTGCAAGCACAACTTTGATCC...ATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTGGGTGGGACTGGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR CAA 90 bp | TTTGCTCATAGCCTCTTTGTTTTGACCAAACTTCTACCAGACCCAAGCAACGTTTGCGAAATAACTGCCTaGTCCAAACATTGTAGCATG | + |
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Preference number: 5 (lower is better) Translates to: FAHSLFVLTKLLPDPSNVCEITA*SKHCSM Trigger: CATGCTACAATGTTTGGACAAGGCAGTTATTTCGCA...AACGTTGCTTGGGTCTGGTAGAAGTTTGGTCAAAACAAAGAGGCTATGAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR CAA 90 bp | TTTGCTCATAGCCTCTTTGTTTTGACCAAACTTCTACCAGACCCAAGCAACGTTCTGCCAGTTAACACTTaGGCCAAAAACATGAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: FAHSLFVLTKLLPDPSNVLPVNT*AKNMKW Trigger: CCATTTCATGTTTTTGGCCAAAGTGTTAACTGGCAG...AACGTTGCTTGGGTCTGGTAGAAGTTTGGTCAAAACAAAGAGGCTATGAGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS GCA 90 bp | TCTGCCAATGATAGGGCAATACGGTGTGATGTTTCAAACAATCCCTaGCATAAATGCAAGTGCCTTGCAGAAAGTCCATACAAATTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SANDRAIRCDVSNNP*HKCKCLAESPYKFQ Trigger: TTGAAATTTGTATGGACTTTCTGCAAGGCACTTGCATTTATGGCAGGGATTGTTTGAAACATCACACCGTATTGCCCTATCATTGGCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047906.10 ENSMUST00000130705.2 |
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| CDS GCA 90 bp | ATGGACTCCTTTGGAGGACTTCTTAGAAAAGTTATGAGAGTAGCTTaGCTTCTTTGCGAAATAACTGCCTTGTCCAAACATTGTAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: MDSFGGLLRKVMRVA*LLCEITALSKHCSM Trigger: CATGCTACAATGTTTGGACAAGGCAGTTATTTCGCAAAGAAGGCAAGCTACTCTCATAACTTTTCTAAGAAGTCCTCCAAAGGAGTCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS CCA 90 bp | ACAAGTTCAAACACAAGCTCAAGGGAAGCTTCCTCACTTTTGTCTTaGAAGAGCTCAGTACTCAACTTATCACTGGTATCCAAAATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TSSNTSSREASSLLS*KSSVLNLSLVSKMY Trigger: GTACATTTTGGATACCAGTGATAAGTTGAGTACTGAGCTCTTCCAAGACAAAAGTGAGGAAGCTTCCCTTGAGCTTGTGTTTGAACTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047906.10 ENSMUST00000130705.2 |
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| CDS-3UTR CAA 90 bp | CAAGCAGAAGAGGATAAGCAACATATTCTGAATAGATCTGTTCAGATTCAATCCTTCAGACCCCGAGAGTaGGCTTCTTCAATTAGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: QAEEDKQHILNRSVQIQSFRPRE*ASSISR Trigger: TCGACTAATTGAAGAAGCCAACTCTCGGGGTCTGAA...GGATTGAATCTGAACAGATCTATTCAGAATATGTTGCTTATCCTCTTCTGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR CAA 90 bp | CAAGCAGAAGAGGATAAGCAACATATTCTGAATAGATCTGTTCAGATTCAATCCTGCCATGACTGCCCATaGTGTATCTGCCAGTTAACA | + |
|
Preference number: 5 (lower is better) Translates to: QAEEDKQHILNRSVQIQSCHDCP*CICQLT Trigger: TGTTAACTGGCAGATACACAATGGGCAGTCATGGCA...GGATTGAATCTGAACAGATCTATTCAGAATATGTTGCTTATCCTCTTCTGCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS GCA 90 bp | GCAATACGGTGTGATGTTTCAAACAATCCCTGCCATAAATGCAAGTaGCTTGCAGAAAGTCCATACAAATTTCAATTCCATTCTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AIRCDVSNNPCHKCK*LAESPYKFQFHSLG Trigger: ACCAAGAGAATGGAATTGAAATTTGTATGGACTTTCTGCAAGGCACTTGCATTTATGGCAGGGATTGTTTGAAACATCACACCGTATTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047906.10 ENSMUST00000130705.2 |
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| CDS GCA 90 bp | GATAGGGCAATACGGTGTGATGTTTCAAACAATCCCTGCCATAAATaGAAGTGCCTTGCAGAAAGTCCATACAAATTTCAATTCCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: DRAIRCDVSNNPCHK*KCLAESPYKFQFHS Trigger: AGAATGGAATTGAAATTTGTATGGACTTTCTGCAAGGCACTTGCATTTATGGCAGGGATTGTTTGAAACATCACACCGTATTGCCCTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047906.10 ENSMUST00000130705.2 |
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| CDS GCA 90 bp | TTTGGAGGACTTCTTAGAAAAGTTATGAGAGTAGCTTGCCTTCTTTaGGAAATAACTGCCTTGTCCAAACATTGTAGCATGCTTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: FGGLLRKVMRVACLL*EITALSKHCSMLST Trigger: TGTGGAAAGCATGCTACAATGTTTGGACAAGGCAGTTATTTCGCAAAGAAGGCAAGCTACTCTCATAACTTTTCTAAGAAGTCCTCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS CCA 90 bp | ACAGCCTTCGTAGTTGGTCAAATTCAGTTGTTTCAAATACAGTCATaGCATTCAAATCTGCCCAAAAGTCTTGTCCTCCATACTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: TAFVVGQIQLFQIQS*HSNLPKSLVLHTSF Trigger: GAATGAAGTATGGAGGACAAGACTTTTGGGCAGATTTGAATGCCATGACTGTATTTGAAACAACTGAATTTGACCAACTACGAAGGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047906.10 ENSMUST00000130705.2 |
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| CDS-3UTR CAA 90 bp | ACCACTTTTCACTTCACTCAGGTTTCTGCTTTGCTTAGAAGTACTTACTATACCATGCAAAAGGTCAGTTaGGAAGTGTCCTGTTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TTFHFTQVSALLRSTYYTMQKVS*EVSCCR Trigger: TCTACAACAGGACACTTCCAAACTGACCTTTTGCAT...GGTATAGTAAGTACTTCTAAGCAAAGCAGAAACCTGAGTGAAGTGAAAAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR CAA 90 bp | CAAGCAATGGTAACATGTCTTAACTTGAAAACAACTGGGGTCACTGGTTTACAATTCCTCACTTTTGTCTaGGAAGAGCTCAGTACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QAMVTCLNLKTTGVTGLQFLTFV*EELSTQ Trigger: TTGAGTACTGAGCTCTTCCAAGACAAAAGTGAGGAA...TTGTAAACCAGTGACCCCAGTTGTTTTCAAGTTAAGACATGTTACCATTGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR CAA 90 bp | CAAGCAATGGTAACATGTCTTAACTTGAAAACAACTGGGGTCACTGGTTTACAATGGATTGTAAAACTATaGTCTTGGAAAGCTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QAMVTCLNLKTTGVTGLQWIVKL*SWKAPG Trigger: ACCAGGAGCTTTCCAAGACAATAGTTTTACAATCCA...TTGTAAACCAGTGACCCCAGTTGTTTTCAAGTTAAGACATGTTACCATTGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR CAA 90 bp | GTGATATATTTCAGTCCTGGTCACAGAATGAAAATTTCTTACCACCTATTAGACAGTAGCTTGCCTTCTTaGCGAAATAACTGCCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VIYFSPGHRMKISYHLLDSSLPS*RNNCLV Trigger: GACAAGGCAGTTATTTCGCAAAGAAGGCAAGCTACT...GTCTAATAGGTGGTAAGAAATTTTCATTCTGTGACCAGGACTGAAATATATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS-3UTR CAA 90 bp | ACCACTTTTCACTTCACTCAGGTTTCTGCTTTGCTTAGAAGTACTTACTATACCAGTTATGAGAGTAGCTaGCCTTCTTTGCGAAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: TTFHFTQVSALLRSTYYTSYESS*PSLRNN Trigger: GTTATTTCGCAAAGAAGGCAAGCTACTCTCATAACT...GGTATAGTAAGTACTTCTAAGCAAAGCAGAAACCTGAGTGAAGTGAAAAGTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS TCA 90 bp | AAGTTGTGCTTGCAAATTCCATCTACTACATCTTGGGATGTTCCATaGAATAAGTGTCTCTCATTTATTATTCTGTCACGGCCAGACATT | + |
|
Preference number: 5 (lower is better) Translates to: KLCLQIPSTTSWDVP*NKCLSFIILSRPDI Trigger: AATGTCTGGCCGTGACAGAATAATAAATGAGAGACACTTATTTCATGGAACATCCCAAGATGTAGTAGATGGAATTTGCAAGCACAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS CCA 90 bp | ATAGAGTTTGAATTACTACAGGGTGGTGTAGACAGCCTTCGTAGTTaGTCAAATTCAGTTGTTTCAAATACAGTCATGGCATTCAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: IEFELLQGGVDSLRS*SNSVVSNTVMAFKS Trigger: AGATTTGAATGCCATGACTGTATTTGAAACAACTGAATTTGACCAACTACGAAGGCTGTCTACACCACCCTGTAGTAATTCAAACTCTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047906.10 ENSMUST00000130705.2 |
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| CDS CAA 90 bp | ATCTGCCACTGTCCCACTGATGGTTTCTGGTGGAAAACTGTGGTCTaGGATTGGAACCCCCTGTTCTGGAGCATCTGTAGAAGGATGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ICHCPTDGFWWKTVV*DWNPLFWSICRRMR Trigger: GCGCATCCTTCTACAGATGCTCCAGAACAGGGGGTTCCAATCCAAGACCACAGTTTTCCACCAGAAACCATCAGTGGGACAGTGGCAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS GCA 72 bp | ATTGGAACCCCCTGTTCTGGAGCATCTGTAGAAGGATaGGCTTCTGGTAATTGGCCCTCAACATTTGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: IGTPCSGASVEG*ASGNWPSTFVP Trigger: TGGGACAAATGTTGAGGGCCAATTACCAGAAGCGCATCCTTCTACAGATGCTCCAGAACAGGGGGTTCCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS CCA 72 bp | GTCCCACTGATGGTTTCTGGTGGAAAACTGTGGTCTTaGATTGGAACCCCCTGTTCTGGAGCATCTGTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VPLMVSGGKLWS*IGTPCSGASVE Trigger: TTCTACAGATGCTCCAGAACAGGGGGTTCCAATCCAAGACCACAGTTTTCCACCAGAAACCATCAGTGGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS CCA 72 bp | TGTTGTAGAATCTGCCACTGTCCCACTGATGGTTTCTaGTGGAAAACTGTGGTCTTGGATTGGAACCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CCRICHCPTDGF*WKTVVLDWNPL Trigger: CAGGGGGTTCCAATCCAAGACCACAGTTTTCCACCAGAAACCATCAGTGGGACAGTGGCAGATTCTACAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS CAA 72 bp | TGTCCCACTGATGGTTTCTGGTGGAAAACTGTGGTCTaGGATTGGAACCCCCTGTTCTGGAGCATCTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: CPTDGFWWKTVV*DWNPLFWSICR Trigger: TCTACAGATGCTCCAGAACAGGGGGTTCCAATCCAAGACCACAGTTTTCCACCAGAAACCATCAGTGGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS CCA 72 bp | TCTGGAGCATCTGTAGAAGGATGCGCTTCTGGTAATTaGCCCTCAACATTTGTCCCATCAGGAATCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SGASVEGCASGN*PSTFVPSGIRT Trigger: TGTCCTGATTCCTGATGGGACAAATGTTGAGGGCCAATTACCAGAAGCGCATCCTTCTACAGATGCTCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS TCA 72 bp | TGGAAACACTCTGCCACTTCTGAGTGGTTGTCCTTTTaGTCTGCCAATGATAGGGCAATACGGTGTGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: WKHSATSEWLSF*SANDRAIRCDV Trigger: AACATCACACCGTATTGCCCTATCATTGGCAGATCAAAAGGACAACCACTCAGAAGTGGCAGAGTGTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047906.10 ENSMUST00000130705.2 |
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| CDS TCA 72 bp | TTTATCTACGCAGTCAGGACTTGTAGGAACATCACCTaGAACAGGATGCAAAAGGTCAGTTTGGAAGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FIYAVRTCRNIT*NRMQKVSLEVS Trigger: GGACACTTCCAAACTGACCTTTTGCATCCTGTTTCAGGTGATGTTCCTACAAGTCCTGACTGCGTAGATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS TCA 72 bp | GGTAAAAGTTGGCTGAAGTTACTCCATCTGGGCAGATaGTTTGTGATGAAGTTGCTTCAAGAGGCAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GKSWLKLLHLGR*FVMKLLQEAEK Trigger: CTTCTCTGCCTCTTGAAGCAACTTCATCACAAATCATCTGCCCAGATGGAGTAACTTCAGCCAACTTTTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS GCA 72 bp | GATAGGGCAATACGGTGTGATGTTTCAAACAATCCCTaGCATAAATGCAAGTGCCTTGCAGAAAGTCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: DRAIRCDVSNNP*HKCKCLAESPY Trigger: GTATGGACTTTCTGCAAGGCACTTGCATTTATGGCAGGGATTGTTTGAAACATCACACCGTATTGCCCTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047906.10 ENSMUST00000130705.2 |
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| CDS CAA 72 bp | ATGAGAGTAGCTTGCCTTCTTTGCGAAATAACTGCCTaGTCCAAACATTGTAGCATGCTTTCCACAGACACG | + |
|
Preference number: 6 (lower is better) Translates to: MRVACLLCEITA*SKHCSMLSTDT Trigger: CGTGTCTGTGGAAAGCATGCTACAATGTTTGGACAAGGCAGTTATTTCGCAAAGAAGGCAAGCTACTCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS CCA 72 bp | TTCTGCAGAAACAGGCACTTGGATGAAGTCCTGAGATaGATGCATATAAACCCACGTTTCAGGGTAAAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: FCRNRHLDEVLR*MHINPRFRVKV Trigger: AACTTTTACCCTGAAACGTGGGTTTATATGCATCCATCTCAGGACTTCATCCAAGTGCCTGTTTCTGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS CAA 72 bp | CATCAAGTGAGCCAGATTCTAGCAAAGTATTTAATATaGGCCTCAAGGATCTCAGGGTTCCAGTTCCCAATC | + |
|
Preference number: 6 (lower is better) Translates to: HQVSQILAKYLI*ASRISGFQFPI Trigger: GATTGGGAACTGGAACCCTGAGATCCTTGAGGCCAATATTAAATACTTTGCTAGAATCTGGCTCACTTGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS CAA 72 bp | ATTGTAGCATGCTTTCCACAGACACGGGGATCAAAGTaGTGCTTGCAAATTCCATCTACTACATCTTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: IVACFPQTRGSK*CLQIPSTTSWD Trigger: ATCCCAAGATGTAGTAGATGGAATTTGCAAGCACAACTTTGATCCCCGTGTCTGTGGAAAGCATGCTACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS CAA 90 bp | TGGTTGTTCCACATCATAAATCTAACTTCTTTCAGACCCCGAGAGTaGGCTTCTTCAATTAGTCGAACAACAGACTCAGGATACTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: WLFHIINLTSFRPRE*ASSISRTTDSGYSL Trigger: GAGAGAGTATCCTGAGTCTGTTGTTCGACTAATTGAAGAAGCCAACTCTCGGGGTCTGAAAGAAGTTAGATTTATGATGTGGAACAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS CAA 90 bp | AGAAAAGTTATGAGAGTAGCTTGCCTTCTTTGCGAAATAACTGCCTaGTCCAAACATTGTAGCATGCTTTCCACAGACACGGGGATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RKVMRVACLLCEITA*SKHCSMLSTDTGIK Trigger: TTTGATCCCCGTGTCTGTGGAAAGCATGCTACAATGTTTGGACAAGGCAGTTATTTCGCAAAGAAGGCAAGCTACTCTCATAACTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS TCA 72 bp | CAATGGAGAGATCTTCTCAGAAATTCTCATTTGGCATaGAAAGTCATCAGAAGGAGAAGGAGGCTGTACTAC | + |
|
Preference number: 6 (lower is better) Translates to: QWRDLLRNSHLA*KVIRRRRRLYY Trigger: GTAGTACAGCCTCCTTCTCCTTCTGATGACTTTTCATGCCAAATGAGAATTTCTGAGAAGATCTCTCCATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS CAA 72 bp | CACATCATAAATCTAACTTCTTTCAGACCCCGAGAGTaGGCTTCTTCAATTAGTCGAACAACAGACTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HIINLTSFRPRE*ASSISRTTDSG Trigger: TCCTGAGTCTGTTGTTCGACTAATTGAAGAAGCCAACTCTCGGGGTCTGAAAGAAGTTAGATTTATGATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047906.10 ENSMUST00000130705.2 |
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| CDS CAA 90 bp | TACAAGTTCAAACACAAGCTCAAGGGAAGCTTCCTCACTTTTGTCTaGGAAGAGCTCAGTACTCAACTTATCACTGGTATCCAAAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: YKFKHKLKGSFLTFV*EELSTQLITGIQNV Trigger: TACATTTTGGATACCAGTGATAAGTTGAGTACTGAGCTCTTCCAAGACAAAAGTGAGGAAGCTTCCCTTGAGCTTGTGTTTGAACTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047906.10 ENSMUST00000130705.2 |
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| CDS CAA 90 bp | GTTGTAAATGATTCGATAACTTTTATCTTCTGCAGAAACAGGCACTaGGATGAAGTCCTGAGATGGATGCATATAAACCCACGTTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VVNDSITFIFCRNRH*DEVLRWMHINPRFR Trigger: CCTGAAACGTGGGTTTATATGCATCCATCTCAGGACTTCATCCAAGTGCCTGTTTCTGCAGAAGATAAAAGTTATCGAATCATTTACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS CCA 72 bp | GTTTTCAATGGAGAGATCTTCTCAGAAATTCTCATTTaGCATGAAAAGTCATCAGAAGGAGAAGGAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VFNGEIFSEILI*HEKSSEGEGGC Trigger: ACAGCCTCCTTCTCCTTCTGATGACTTTTCATGCCAAATGAGAATTTCTGAGAAGATCTCTCCATTGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS CCA 72 bp | GTACTGGATTGTAAAACTATTGTCTTGGAAAGCTCCTaGTACATAATCCATAACTTTATCTACGCAGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VLDCKTIVLESS*YIIHNFIYAVR Trigger: CCTGACTGCGTAGATAAAGTTATGGATTATGTACCAGGAGCTTTCCAAGACAATAGTTTTACAATCCAGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047906.10 |
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| CDS GCA 72 bp | TGTGATGTTTCAAACAATCCCTGCCATAAATGCAAGTaGCTTGCAGAAAGTCCATACAAATTTCAATTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: CDVSNNPCHKCK*LAESPYKFQFH Trigger: ATGGAATTGAAATTTGTATGGACTTTCTGCAAGGCACTTGCATTTATGGCAGGGATTGTTTGAAACATCACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047906.10 ENSMUST00000130705.2 |
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| CDS GCA 72 bp | TTCAGTTGTTTCAAATACAGTCATGGCATTCAAATCTaGCCAAAAGTCTTGTCCTCCATACTTCATTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: FSCFKYSHGIQI*PKVLSSILHSH Trigger: ATGAGAATGAAGTATGGAGGACAAGACTTTTGGGCAGATTTGAATGCCATGACTGTATTTGAAACAACTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047906.10 ENSMUST00000130705.2 |
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| CDS CAA 72 bp | ATGTTTCAAACAATCCCTGCCATAAATGCAAGTGCCTaGCAGAAAGTCCATACAAATTTCAATTCCATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: MFQTIPAINASA*QKVHTNFNSIL Trigger: GAGAATGGAATTGAAATTTGTATGGACTTTCTGCAAGGCACTTGCATTTATGGCAGGGATTGTTTGAAACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047906.10 ENSMUST00000130705.2 |
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