Pregenerated sensors for TINF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007589Ensembl transcript IDs: ENSMUST00000007733.8, ENSMUST00000226314.2, ENSMUST00000226819.2, ENSMUST00000227842.2, ENSMUST00000227873.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGCACTGCCACTGGAGCCTCCCGACAGGGCGTGCCTCTCCCACTaGAGCCCCTGTGGTGGTGGCTGCCTAATTCAGTTCCAGCTCTCA | + |
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Preference number: 1 (lower is better) Translates to: AALPLEPPDRACLSH*SPCGGGCLIQFQLS Trigger: TGAGAGCTGGAACTGAATTAGGCAGCCACCACCACAGGGGCTGCAGTGGGAGAGGCACGCCCTGTCGGGAGGCTCCAGTGGCAGTGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR GCA 90 bp | TTTCCTGAGGCAGCAGCACTGCCACTGGAGCCTCCCGACAGGGCGTaGCTCTCCCACTGCAGCCCCTGTGGTGGTGGCTGCCTAATTCAG | + |
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Preference number: 1 (lower is better) Translates to: FPEAAALPLEPPDRA*LSHCSPCGGGCLIQ Trigger: CTGAATTAGGCAGCCACCACCACAGGGGCTGCAGTGGGAGAGGCACGCCCTGTCGGGAGGCTCCAGTGGCAGTGCTGCTGCCTCAGGAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR CCA 90 bp | GCCTCCCGACAGGGCGTGCCTCTCCCACTGCAGCCCCTGTGGTGGTaGCTGCCTAATTCAGTTCCAGCTCTCACTCTACTCACCCATGCC | + |
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Preference number: 1 (lower is better) Translates to: ASRQGVPLPLQPLWW*LPNSVPALTLLTHA Trigger: GGCATGGGTGAGTAGAGTGAGAGCTGGAACTGAATTAGGCAGCCACCACCACAGGGGCTGCAGTGGGAGAGGCACGCCCTGTCGGGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR CCA 90 bp | AGTAGACCCAAGAAGCCTACTTTCCTGAGGCAGCAGCACTGCCACTaGAGCCTCCCGACAGGGCGTGCCTCTCCCACTGCAGCCCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: SRPKKPTFLRQQHCH*SLPTGRASPTAAPV Trigger: CACAGGGGCTGCAGTGGGAGAGGCACGCCCTGTCGGGAGGCTCCAGTGGCAGTGCTGCTGCCTCAGGAAAGTAGGCTTCTTGGGTCTACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR CCA 90 bp | GGAGCCTCCCGACAGGGCGTGCCTCTCCCACTGCAGCCCCTGTGGTaGTGGCTGCCTAATTCAGTTCCAGCTCTCACTCTACTCACCCAT | + |
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Preference number: 1 (lower is better) Translates to: GASRQGVPLPLQPLW*WLPNSVPALTLLTH Trigger: ATGGGTGAGTAGAGTGAGAGCTGGAACTGAATTAGGCAGCCACCACCACAGGGGCTGCAGTGGGAGAGGCACGCCCTGTCGGGAGGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR CCA 90 bp | ACTGGAGCCTCCCGACAGGGCGTGCCTCTCCCACTGCAGCCCCTGTaGTGGTGGCTGCCTAATTCAGTTCCAGCTCTCACTCTACTCACC | + |
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Preference number: 1 (lower is better) Translates to: TGASRQGVPLPLQPL*WWLPNSVPALTLLT Trigger: GGTGAGTAGAGTGAGAGCTGGAACTGAATTAGGCAGCCACCACCACAGGGGCTGCAGTGGGAGAGGCACGCCCTGTCGGGAGGCTCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR GCA 90 bp | CCCGACAGGGCGTGCCTCTCCCACTGCAGCCCCTGTGGTGGTGGCTaGCTAATTCAGTTCCAGCTCTCACTCTACTCACCCATGCCTCTA | + |
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Preference number: 1 (lower is better) Translates to: PDRACLSHCSPCGGG*LIQFQLSLYSPMPL Trigger: TAGAGGCATGGGTGAGTAGAGTGAGAGCTGGAACTGAATTAGGCAGCCACCACCACAGGGGCTGCAGTGGGAGAGGCACGCCCTGTCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR TCA 90 bp | TCCAATCTTCAGCAATTCCCAGTAGACCCAAGAAGCCTACTTTCCTaGGGCAGCAGCACTGCCACTGGAGCCTCCCGACAGGGCGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: SNLQQFPVDPRSLLS*GSSTATGASRQGVP Trigger: AGGCACGCCCTGTCGGGAGGCTCCAGTGGCAGTGCTGCTGCCTCAGGAAAGTAGGCTTCTTGGGTCTACTGGGAATTGCTGAAGATTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR GCA 90 bp | AGGGCATCAGATTTCGTTACGGATGGTTGTGAGTCACCATGTGGTTaGTGGGATCTGAACTCCGGACCTTCGGAAGAGCAGTCAGCGCTC | + |
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Preference number: 1 (lower is better) Translates to: RASDFVTDGCESPCG*WDLNSGPSEEQSAL Trigger: GAGCGCTGACTGCTCTTCCGAAGGTCCGGAGTTCAGATCCCAGCAACCACATGGTGACTCACAACCATCCGTAACGAAATCTGATGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226819.2 |
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| 3UTR CCA 90 bp | TCTGTCCCTCTTCCCAGGCTCTGTCTGTACAACTCGGAAGAAAACTaGAGTGGGGTATCCACAGCTCAGTGCAGTGATGGAGTGTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: SVPLPRLCLYNSEEN*SGVSTAQCSDGVCR Trigger: TCTGCACACTCCATCACTGCACTGAGCTGTGGATACCCCACTCCAGTTTTCTTCCGAGTTGTACAGACAGAGCCTGGGAAGAGGGACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| 3UTR CCA 90 bp | GCATCAGATTTCGTTACGGATGGTTGTGAGTCACCATGTGGTTGCTaGGATCTGAACTCCGGACCTTCGGAAGAGCAGTCAGCGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASDFVTDGCESPCGC*DLNSGPSEEQSALL Trigger: TAAGAGCGCTGACTGCTCTTCCGAAGGTCCGGAGTTCAGATCCCAGCAACCACATGGTGACTCACAACCATCCGTAACGAAATCTGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226819.2 |
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| 3UTR GCA 90 bp | AGTGGGGTATCCACAGCTCAGTGCAGTGATGGAGTGTGCAGATGCTaGTCATGGCCTCAAAGGCCATATCATCTCAGTAAGACTCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: SGVSTAQCSDGVCRC*SWPQRPYHLSKTQD Trigger: GTCTTGAGTCTTACTGAGATGATATGGCCTTTGAGGCCATGAGCAGCATCTGCACACTCCATCACTGCACTGAGCTGTGGATACCCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| 3UTR CCA 90 bp | GTATCCACAGCTCAGTGCAGTGATGGAGTGTGCAGATGCTGCTCATaGCCTCAAAGGCCATATCATCTCAGTAAGACTCAAGACCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: VSTAQCSDGVCRCCS*PQRPYHLSKTQDLE Trigger: CTCCAGGTCTTGAGTCTTACTGAGATGATATGGCCTTTGAGGCCATGAGCAGCATCTGCACACTCCATCACTGCACTGAGCTGTGGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| 3UTR GCA 90 bp | AGCTTAGACGTTCTTCTATACTTGAAACACTCTCATACAGATGGATaGTGGGCTTCCAGCACAGGCTGGCATCTAGATGCTCCTCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: SLDVLLYLKHSHTDG*WASSTGWHLDAPPG Trigger: CCCAGGAGGAGCATCTAGATGCCAGCCTGTGCTGGAAGCCCAGCATCCATCTGTATGAGAGTGTTTCAAGTATAGAAGAACGTCTAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR GCA 90 bp | GTGGAACATACTATTCGTGACATCCTAGGAGGCATCCGGTCTACATaGACGTATGTAGGGGCTGCTAAACTGAAGGAACTAAGCCGGAGA | + |
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Preference number: 1 (lower is better) Translates to: VEHTIRDILGGIRST*TYVGAAKLKELSRR Trigger: TCTCCGGCTTAGTTCCTTCAGTTTAGCAGCCCCTACATACGTGCATGTAGACCGGATGCCTCCTAGGATGTCACGAATAGTATGTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR TCA 90 bp | CTGAGTACAGGTATGTGTGGAAGGCTAGCACCTGAATGTTCCTGGTaGCGACTCTATGAAAGATGTTGTCATACCCTCTGGGGAATGTAC | + |
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Preference number: 1 (lower is better) Translates to: LSTGMCGRLAPECSW*RLYERCCHTLWGMY Trigger: GTACATTCCCCAGAGGGTATGACAACATCTTTCATAGAGTCGTCACCAGGAACATTCAGGTGCTAGCCTTCCACACATACCTGTACTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR TCA 90 bp | TGGGGCTCTGGTGAAGTCCTGGTCAGGACATTAGTTCTAGTCCTTTaGCATGGGCAGTTGAGAAGTCTTGAGAAATCTATGCTGTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: WGSGEVLVRTLVLVL*HGQLRSLEKSMLSL Trigger: GAGAGACAGCATAGATTTCTCAAGACTTCTCAACTGCCCATGTCAAAGGACTAGAACTAATGTCCTGACCAGGACTTCACCAGAGCCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| 3UTR TCA 90 bp | AAGGGCCTCAACCAGCTAAGAGAAGCCTGTTATGTTTCGGAGGAATaGCCTACACAGACCTATGCAAGTCTTTATTCCCCTTCTTCCCAT | + |
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Preference number: 1 (lower is better) Translates to: KGLNQLREACYVSEE*PTQTYASLYSPSSH Trigger: ATGGGAAGAAGGGGAATAAAGACTTGCATAGGTCTGTGTAGGTCATTCCTCCGAAACATAACAGGCTTCTCTTAGCTGGTTGAGGCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR GCA 90 bp | AGCCAGGCAACTCAAGTCTGGACTTCCTCTTCTTTTCCACTAAATTaGATGCAGAGCTGCAGCAGAAGATGGACAGAGTGCAGAGAATAT | + |
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Preference number: 1 (lower is better) Translates to: SQATQVWTSSSFPLN*MQSCSRRWTECREY Trigger: ATATTCTCTGCACTCTGTCCATCTTCTGCTGCAGCTCTGCATGCAATTTAGTGGAAAAGAAGAGGAAGTCCAGACTTGAGTTGCCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR CCA 90 bp | CAAGTGCTACAAAGCTTTCAGCAATGTAGCCAGGCAACTCAAGTCTaGACTTCCTCTTCTTTTCCACTAAATTGCATGCAGAGCTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: QVLQSFQQCSQATQV*TSSSFPLNCMQSCS Trigger: GCTGCAGCTCTGCATGCAATTTAGTGGAAAAGAAGAGGAAGTCCAGACTTGAGTTGCCTGGCTACATTGCTGAAAGCTTTGTAGCACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR CCA 90 bp | CCTACTTTCCTGAGGCAGCAGCACTGCCACTGGAGCCTCCCGACAGGGCGTGCCTGGCAGCCCTTGGTCTaGAAAGGGAAGGCTGCGGGA | + |
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Preference number: 2 (lower is better) Translates to: PTFLRQQHCHWSLPTGRAWQPLV*KGKAAG Trigger: TCCCGCAGCCTTCCCTTTCCAGACCAAGGGCTGCCA...GGCACGCCCTGTCGGGAGGCTCCAGTGGCAGTGCTGCTGCCTCAGGAAAGTAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGGCTGACTTTGTGATGTTGGGTGGCATGCTGGCCGGGCACAGTGAATCACAGCCCCTGTGGTGGTaGCTGCCTAATTCAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: AGADFVMLGGMLAGHSESQPLWW*LPNSVP Trigger: TGGAACTGAATTAGGCAGCCACCACCACAGGGGCTG...TGATTCACTGTGCCCGGCCAGCATGCCACCCAACATCACAAAGTCAGCCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGGGGCTGACTTTGTGATGTTGGGTGGCATGCTGGCCGGGCACAGTGAATCATCTCATACAGATGGATaGTGGGCTTCCAGCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: AGADFVMLGGMLAGHSESSHTDG*WASSTG Trigger: GCCTGTGCTGGAAGCCCAGCATCCATCTGTATGAGA...TGATTCACTGTGCCCGGCCAGCATGCCACCCAACATCACAAAGTCAGCCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR GCA 90 bp | CACAGTGAATCAGGTGGCGAACTCATTGAGAGAGATGGCAAGAAATATAAGCTCCCTCCCGACAGGGCGTaGCTCTCCCACTGCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: HSESGGELIERDGKKYKLPPDRA*LSHCSP Trigger: GGGGCTGCAGTGGGAGAGGCACGCCCTGTCGGGAGG...GAGCTTATATTTCTTGCCATCTCTCTCAATGAGTTCGCCACCTGATTCACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGTCCTGGTAAGCTGGTTCCTTGGGACCATCGTCTCATCTGTCCCGTTGGAGGAGAGGGTTTGTGGCTaGCCAGCAGCCACTGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: LVLVSWFLGTIVSSVPLEERVCG*PAATVF Trigger: GAAAACAGTGGCTGCTGGGCAGCCACAAACCCTCTC...CTCCAACGGGACAGATGAGACGATGGTCCCAAGGAACCAGCTTACCAGGACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGTTGGAGGCAAAACCATAGGCCAGTTTACTCTCACCTCTGTCCCTCTTCCCGGAGTGTGCAGATGCTaGTCATGGCCTCAAAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PVGGKTIGQFTLTSVPLPGVCRC*SWPQRP Trigger: TGGCCTTTGAGGCCATGAGCAGCATCTGCACACTCC...GGGAAGAGGGACAGAGGTGAGAGTAAACTGGCCTATGGTTTTGCCTCCAACGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGGTGTGGCTGAGTACAGGTATGTGTGGAAGGCTAGCACCTGAATGTTCCCTGCAGCCCCTGTGGTaGTGGCTGCCTAATTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: QEVWLSTGMCGRLAPECSLQPLW*WLPNSV Trigger: AACTGAATTAGGCAGCCACCACCACAGGGGCTGCAG...GGAACATTCAGGTGCTAGCCTTCCACACATACCTGTACTCAGCCACACCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR GCA 90 bp | TCACCCATGCCTCTAGCTGCACAATGTTATGGCACTACGGGAGAGGCGAGGAAGCTGGAAAGGGAAGGCTaGGGGAATCATGTTAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SPMPLAAQCYGTTGEARKLEREG*GNHVKQ Trigger: CTGCTTAACATGATTCCCGCAGCCTTCCCTTTCCAG...CTTCCTCGCCTCTCCCGTAGTGCCATAACATTGTGCAGCTAGAGGCATGGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR GCA 90 bp | GAATCAGGTGGCGAACTCATTGAGAGAGATGGCAAGAAATATAAGCTCTTCTACGCGTGCCTCTCCCACTaGAGCCCCTGTGGTGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: ESGGELIERDGKKYKLFYACLSH*SPCGGG Trigger: GCCACCACCACAGGGGCTGCAGTGGGAGAGGCACGC...GTAGAAGAGCTTATATTTCTTGCCATCTCTCTCAATGAGTTCGCCACCTGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR TCA 90 bp | GTGATGTTGGGTGGCATGCTGGCCGGGCACAGTGAATCAGGTGGCGAACTCATTCCTGAATGTTCCTGGTaGCGACTCTATGAAAGATGT | + |
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Preference number: 2 (lower is better) Translates to: VMLGGMLAGHSESGGELIPECSW*RLYERC Trigger: ACATCTTTCATAGAGTCGTCACCAGGAACATTCAGG...AATGAGTTCGCCACCTGATTCACTGTGCCCGGCCAGCATGCCACCCAACATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGAGGGTTTGTGGCTGCCCAGCAGCCACTGTTTTCTGTAGGGTGGGGCTCTGCAGTTGAGAAGTCTTaGGAAATCTATGCTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: WRGFVAAQQPLFSVGWGSAVEKS*EIYAVS Trigger: AGAGACAGCATAGATTTCTCAAGACTTCTCAACTGC...AGAGCCCCACCCTACAGAAAACAGTGGCTGCTGGGCAGCCACAAACCCTCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTCCTGGTAAGCTGGTTCCTTGGGACCATCGTCTCATCTGTCCCGTTGGAGAACTCGGAAGAAAACTaGAGTGGGGTATCCACAGCT | + |
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Preference number: 2 (lower is better) Translates to: LVLVSWFLGTIVSSVPLENSEEN*SGVSTA Trigger: AGCTGTGGATACCCCACTCCAGTTTTCTTCCGAGTT...CTCCAACGGGACAGATGAGACGATGGTCCCAAGGAACCAGCTTACCAGGACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGGTGGCATGCTGGCCGGGCACAGTGAATCAGGTGGCGAACTCATTGAGAGATCTTTTCCACTAAATTaGATGCAGAGCTGCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: LGGMLAGHSESGGELIERSFPLN*MQSCSR Trigger: TCTGCTGCAGCTCTGCATGCAATTTAGTGGAAAAGA...TCTCTCAATGAGTTCGCCACCTGATTCACTGTGCCCGGCCAGCATGCCACCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTCTCACTCTACTCACCCATGCCTCTAGCTGCACAATGTTATGGCACTACACACTCTCATACAGATaGATGCTGGGCTTCCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: PALTLLTHASSCTMLWHYTLSYR*MLGFQH Trigger: GTGCTGGAAGCCCAGCATCCATCTGTATGAGAGTGT...GTAGTGCCATAACATTGTGCAGCTAGAGGCATGGGTGAGTAGAGTGAGAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGTCCTGGTAAGCTGGTTCCTTGGGACCATCGTCTCATCTGTCCCGTTGGAGTTAGTTCTAGTCCTTTaGCATGGGCAGTTGAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: LVLVSWFLGTIVSSVPLELVLVL*HGQLRS Trigger: ACTTCTCAACTGCCCATGTCAAAGGACTAGAACTAA...CTCCAACGGGACAGATGAGACGATGGTCCCAAGGAACCAGCTTACCAGGACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| 3UTR-3UTR TCA 90 bp | GAATCAGGTGGCGAACTCATTGAGAGAGATGGCAAGAAATATAAGCTCTTCTACGCGAGGAAGGAGACGTaGGATCAACAAATGAGACCC | + |
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Preference number: 2 (lower is better) Translates to: ESGGELIERDGKKYKLFYARKET*DQQMRP Trigger: GGGTCTCATTTGTTGATCTCACGTCTCCTTCCTCGC...GTAGAAGAGCTTATATTTCTTGCCATCTCTCTCAATGAGTTCGCCACCTGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGTGAATCAGGTGGCGAACTCATTGAGAGAGATGGCAAGAAATATAAGCTCGGAACATACTATTCGTaGCATCCTAGGAGGCATCCG | + |
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Preference number: 2 (lower is better) Translates to: HSESGGELIERDGKKYKLGTYYS*HPRRHP Trigger: CGGATGCCTCCTAGGATGTCACGAATAGTATGTTCC...GAGCTTATATTTCTTGCCATCTCTCTCAATGAGTTCGCCACCTGATTCACTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR GCA 90 bp | CCTAATTCAGTTCCAGCTCTCACTCTACTCACCCATGCCTCTAGCTGCACAATGACCTACACAGACCTATaGAAGTCTTTATTCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PNSVPALTLLTHASSCTMTYTDL*KSLFPF Trigger: GAAGGGGAATAAAGACTTGCATAGGTCTGTGTAGGT...CATTGTGCAGCTAGAGGCATGGGTGAGTAGAGTGAGAGCTGGAACTGAATTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCAAAGGCCATATCATCTCAGTAAGACTCAAGACCTGGAGAGGGTTTGTGGCGTCTTGAGAAATCTATaGTGTCTCTCACAGCATTCC | + |
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Preference number: 2 (lower is better) Translates to: PQRPYHLSKTQDLERVCGVLRNL*CLSQHS Trigger: GGAATGCTGTGAGAGACAGCATAGATTTCTCAAGAC...GCCACAAACCCTCTCCAGGTCTTGAGTCTTACTGAGATGATATGGCCTTTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTGTAGGGTGGGGCTCTGGTGAAGTCCTGGTCAGGACATTAGTTCTAGTCTTTGACATGGGCAGTTaGGAAGTCTTGAGAAATCTA | + |
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Preference number: 2 (lower is better) Translates to: FSVGWGSGEVLVRTLVLVFDMGS*EVLRNL Trigger: TAGATTTCTCAAGACTTCTCAACTGCCCATGTCAAA...GACTAGAACTAATGTCCTGACCAGGACTTCACCAGAGCCCCACCCTACAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGGCAACTCAAGTCTGGACTTCCTCTTCTTTTCCACTAAATTGCATGCAGAGCTGCAGCAGAAGATaGACAGAGTGCAGAGAATAT | + |
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Preference number: 2 (lower is better) Translates to: SQATQVWTSSSFPLNCMQSCSRR*TECREY Trigger: ATATTCTCTGCACTCTGTCCATCTTCTGCTGCAGCT...CTGCATGCAATTTAGTGGAAAAGAAGAGGAAGTCCAGACTTGAGTTGCCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR TCA 90 bp | CGACTCTATGAAAGATGTTGTCATACCCTCTGGGGAATGTACGGTATCACTCCTACGTTCTTCTATACTTaGAACACTCTCATACAGATG | + |
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Preference number: 2 (lower is better) Translates to: RLYERCCHTLWGMYGITPTFFYT*NTLIQM Trigger: CATCTGTATGAGAGTGTTTCAAGTATAGAAGAACGT...AGGAGTGATACCGTACATTCCCCAGAGGGTATGACAACATCTTTCATAGAGTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCTCTCTCAACCCTTCTATGTAAATCTAAACTCTTGCCAAAGGAGTAAATATAATTGCATGCAGAGCTaGAGCAGAAGATGGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: RLSQPFYVNLNSCQRSKYNCMQS*SRRWTE Trigger: CTCTGTCCATCTTCTGCTGCAGCTCTGCATGCAATT...ATATTTACTCCTTTGGCAAGAGTTTAGATTTACATAGAAGGGTTGAGAGAGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR TCA 90 bp | GAATCAGGTGGCGAACTCATTGAGAGAGATGGCAAGAAATATAAGCTCTTCTACAGCAGCTTCATTAAATaGCATCATCACGTGTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: ESGGELIERDGKKYKLFYSSFIK*HHHVSK Trigger: TTTAGACACGTGATGATGTCATTTAATGAAGCTGCT...GTAGAAGAGCTTATATTTCTTGCCATCTCTCTCAATGAGTTCGCCACCTGATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCTCTCTCAACCCTTCTATGTAAATCTAAACTCTTGCCAAAGGAGTAAATATCAGGCAACTCAAGTCTaGACTTCCTCTTCTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: RLSQPFYVNLNSCQRSKYQATQV*TSSSFP Trigger: TGGAAAAGAAGAGGAAGTCCAGACTTGAGTTGCCTG...ATATTTACTCCTTTGGCAAGAGTTTAGATTTACATAGAAGGGTTGAGAGAGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCTCTCTCAACCCTTCTATGTAAATCTAAACTCTTGCCAAAGGAGTAAATATAGAAGATGGACAGAGTaGAGAGAATATTCCAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: RLSQPFYVNLNSCQRSKYRRWTE*REYSRG Trigger: TCCTCTGGAATATTCTCTGCACTCTGTCCATCTTCT...ATATTTACTCCTTTGGCAAGAGTTTAGATTTACATAGAAGGGTTGAGAGAGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR GCA 72 bp | GCAGCAGCACTGCCACTGGAGCCTCCCGACAGGGCGTaGCTCTCCCACTGCAGCCCCTGTGGTGGTGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AAALPLEPPDRA*LSHCSPCGGGC Trigger: GCAGCCACCACCACAGGGGCTGCAGTGGGAGAGGCACGCCCTGTCGGGAGGCTCCAGTGGCAGTGCTGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR GCA 72 bp | CCACTGGAGCCTCCCGACAGGGCGTGCCTCTCCCACTaGAGCCCCTGTGGTGGTGGCTGCCTAATTCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PLEPPDRACLSH*SPCGGGCLIQF Trigger: GAACTGAATTAGGCAGCCACCACCACAGGGGCTGCAGTGGGAGAGGCACGCCCTGTCGGGAGGCTCCAGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR GCA 72 bp | GCGTGCCTCTCCCACTGCAGCCCCTGTGGTGGTGGCTaGCTAATTCAGTTCCAGCTCTCACTCTACTCACCC | + |
|
Preference number: 3 (lower is better) Translates to: ACLSHCSPCGGG*LIQFQLSLYSP Trigger: GGGTGAGTAGAGTGAGAGCTGGAACTGAATTAGGCAGCCACCACCACAGGGGCTGCAGTGGGAGAGGCACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR TCA 72 bp | TGTTATGGCACTACGGGAGAGGCGAGGAAGGAGACGTaGGATCAACAAATGAGACCCTGGGGACAGCCCCCG | + |
|
Preference number: 3 (lower is better) Translates to: CYGTTGEARKET*DQQMRPWGQPP Trigger: CGGGGGCTGTCCCCAGGGTCTCATTTGTTGATCTCACGTCTCCTTCCTCGCCTCTCCCGTAGTGCCATAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR TCA 72 bp | CAGCAATTCCCAGTAGACCCAAGAAGCCTACTTTCCTaGGGCAGCAGCACTGCCACTGGAGCCTCCCGACAG | + |
|
Preference number: 3 (lower is better) Translates to: QQFPVDPRSLLS*GSSTATGASRQ Trigger: CTGTCGGGAGGCTCCAGTGGCAGTGCTGCTGCCTCAGGAAAGTAGGCTTCTTGGGTCTACTGGGAATTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR TCA 72 bp | CGGGAGAGGCGAGGAAGGAGACGTGAGATCAACAAATaGGACCCTGGGGACAGCCCCCGAAGATTAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RERRGRRREINK*DPGDSPRRLGR Trigger: TCTTCCTAATCTTCGGGGGCTGTCCCCAGGGTCTCATTTGTTGATCTCACGTCTCCTTCCTCGCCTCTCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR TCA 72 bp | CGGATGGTTGTGAGTCACCATGTGGTTGCTGGGATCTaGACTCCGGACCTTCGGAAGAGCAGTCAGCGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RMVVSHHVVAGI*TPDLRKSSQRS Trigger: AGAGCGCTGACTGCTCTTCCGAAGGTCCGGAGTTCAGATCCCAGCAACCACATGGTGACTCACAACCATCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226819.2 |
||
| 3UTR GCA 72 bp | CTCAGTAAGACTCAAGACCTGGAGAGGGTTTGTGGCTaGCCAGCAGCCACTGTTTTCTGTAGGGTGGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LSKTQDLERVCG*PAATVFCRVGL Trigger: GAGCCCCACCCTACAGAAAACAGTGGCTGCTGGGCAGCCACAAACCCTCTCCAGGTCTTGAGTCTTACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| 3UTR GCA 72 bp | GTTCCAGCTCTCACTCTACTCACCCATGCCTCTAGCTaGACAATGTTATGGCACTACGGGAGAGGCGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VPALTLLTHASS*TMLWHYGRGEE Trigger: TTCCTCGCCTCTCCCGTAGTGCCATAACATTGTGCAGCTAGAGGCATGGGTGAGTAGAGTGAGAGCTGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR CCA 72 bp | ACTCTACTCACCCATGCCTCTAGCTGCACAATGTTATaGCACTACGGGAGAGGCGAGGAAGGAGACGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TLLTHASSCTML*HYGRGEEGDVR Trigger: TCTCACGTCTCCTTCCTCGCCTCTCCCGTAGTGCCATAACATTGTGCAGCTAGAGGCATGGGTGAGTAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR CCA 72 bp | TTTGTGGCTGCCCAGCAGCCACTGTTTTCTGTAGGGTaGGGCTCTGGTGAAGTCCTGGTCAGGACATTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: FVAAQQPLFSVG*GSGEVLVRTLV Trigger: AACTAATGTCCTGACCAGGACTTCACCAGAGCCCCACCCTACAGAAAACAGTGGCTGCTGGGCAGCCACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| 3UTR TCA 72 bp | CCAGCAGCCACTGTTTTCTGTAGGGTGGGGCTCTGGTaGAGTCCTGGTCAGGACATTAGTTCTAGTCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PAATVFCRVGLW*SPGQDISSSPL Trigger: CAAAGGACTAGAACTAATGTCCTGACCAGGACTTCACCAGAGCCCCACCCTACAGAAAACAGTGGCTGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| 3UTR GCA 72 bp | GATTTCGTTACGGATGGTTGTGAGTCACCATGTGGTTaGTGGGATCTGAACTCCGGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DFVTDGCESPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCGGAGTTCAGATCCCAGCAACCACATGGTGACTCACAACCATCCGTAACGAAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226819.2 |
||
| 3UTR CCA 72 bp | CTTCCCAGGCTCTGTCTGTACAACTCGGAAGAAAACTaGAGTGGGGTATCCACAGCTCAGTGCAGTGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPRLCLYNSEEN*SGVSTAQCSDG Trigger: TCCATCACTGCACTGAGCTGTGGATACCCCACTCCAGTTTTCTTCCGAGTTGTACAGACAGAGCCTGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| 3UTR CCA 72 bp | TTCGTTACGGATGGTTGTGAGTCACCATGTGGTTGCTaGGATCTGAACTCCGGACCTTCGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: FVTDGCESPCGC*DLNSGPSEEQS Trigger: TGACTGCTCTTCCGAAGGTCCGGAGTTCAGATCCCAGCAACCACATGGTGACTCACAACCATCCGTAACGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226819.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTAATTCAGTTCCAGCTCTCACTCTACTCACCCATGCCTCTAGCTGCACAATGCAGAAATGGCAGCCCTaGGTCTGGAAAGGGAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PNSVPALTLLTHASSCTMQKWQP*VWKGKA Trigger: AGCCTTCCCTTTCCAGACCAAGGGCTGCCATTTCTG...CATTGTGCAGCTAGAGGCATGGGTGAGTAGAGTGAGAGCTGGAACTGAATTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR CCA 72 bp | ATCAAAGTGGGAATTGGTCCTGGTAAGCTGGTTCCTTaGGACCATCGTCTCATCTGTCCCGTTGGAGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: IKVGIGPGKLVP*DHRLICPVGGK Trigger: TTTGCCTCCAACGGGACAGATGAGACGATGGTCCCAAGGAACCAGCTTACCAGGACCAATTCCCACTTTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| 3UTR TCA 72 bp | GCCGGAGAACTACTTTTATCCGAGTCACCCAGCAAGTaGATCCAATCTTCAGCAATTCCCAGTAGACCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: AGELLLSESPSK*IQSSAIPSRPK Trigger: CTTGGGTCTACTGGGAATTGCTGAAGATTGGATTCACTTGCTGGGTGACTCGGATAAAAGTAGTTCTCCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR GCA 72 bp | ACTATTCGTGACATCCTAGGAGGCATCCGGTCTACATaGACGTATGTAGGGGCTGCTAAACTGAAGGAACTA | + |
|
Preference number: 3 (lower is better) Translates to: TIRDILGGIRST*TYVGAAKLKEL Trigger: TAGTTCCTTCAGTTTAGCAGCCCCTACATACGTGCATGTAGACCGGATGCCTCCTAGGATGTCACGAATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR CCA 72 bp | CTTCTATACTTGAAACACTCTCATACAGATGGATGCTaGGCTTCCAGCACAGGCTGGCATCTAGATGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLYLKHSHTDGC*ASSTGWHLDAP Trigger: AGGAGCATCTAGATGCCAGCCTGTGCTGGAAGCCCAGCATCCATCTGTATGAGAGTGTTTCAAGTATAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR GCA 72 bp | GTTCTTCTATACTTGAAACACTCTCATACAGATGGATaGTGGGCTTCCAGCACAGGCTGGCATCTAGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: VLLYLKHSHTDG*WASSTGWHLDA Trigger: AGCATCTAGATGCCAGCCTGTGCTGGAAGCCCAGCATCCATCTGTATGAGAGTGTTTCAAGTATAGAAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR CCA 72 bp | AGACGTTCTTCTATACTTGAAACACTCTCATACAGATaGATGCTGGGCTTCCAGCACAGGCTGGCATCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: RRSSILETLSYR*MLGFQHRLASR Trigger: TCTAGATGCCAGCCTGTGCTGGAAGCCCAGCATCCATCTGTATGAGAGTGTTTCAAGTATAGAAGAACGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR TCA 72 bp | GGTGAAGTCCTGGTCAGGACATTAGTTCTAGTCCTTTaGCATGGGCAGTTGAGAAGTCTTGAGAAATCTATG | + |
|
Preference number: 3 (lower is better) Translates to: GEVLVRTLVLVL*HGQLRSLEKSM Trigger: CATAGATTTCTCAAGACTTCTCAACTGCCCATGTCAAAGGACTAGAACTAATGTCCTGACCAGGACTTCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| 3UTR TCA 72 bp | TATAATAGGAAGGTCACAGTTGAGGCATGGATTATATaGAAGCACAAAAGCTGCTCTCCACCACCGACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: YNRKVTVEAWII*KHKSCSPPPTL Trigger: TAGGGTCGGTGGTGGAGAGCAGCTTTTGTGCTTTCATATAATCCATGCCTCAACTGTGACCTTCCTATTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| 3UTR CCA 72 bp | CAAAGCTTTCAGCAATGTAGCCAGGCAACTCAAGTCTaGACTTCCTCTTCTTTTCCACTAAATTGCATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QSFQQCSQATQV*TSSSFPLNCMQ Trigger: CTGCATGCAATTTAGTGGAAAAGAAGAGGAAGTCCAGACTTGAGTTGCCTGGCTACATTGCTGAAAGCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR GCA 72 bp | AGGCTCTCTCAACCCTTCTATGTAAATCTAAACTCTTaGCAAAGGAGTAAATATGAGAAGGGCCTCAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLSQPFYVNLNS*QRSKYEKGLNQ Trigger: CTGGTTGAGGCCCTTCTCATATTTACTCCTTTGGCAAGAGTTTAGATTTACATAGAAGGGTTGAGAGAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTCTCTCAACCCTTCTATGTAAATCTAAACTCTTGCCAAAGGAGTAAATATTTCTTTTCCACTAAATaGCATGCAGAGCTGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLSQPFYVNLNSCQRSKYFFSTK*HAELQQ Trigger: CTGCTGCAGCTCTGCATGCAATTTAGTGGAAAAGAA...ATATTTACTCCTTTGGCAAGAGTTTAGATTTACATAGAAGGGTTGAGAGAGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| CDS-3UTR CCA 90 bp | CCTACTTTCCTGAGGCAGCAGCACTGCCACTGGAGCCTCCCGACAGGGCGTGCCAGGACTGTGGAATGCTaGCCTGGTTTGCTGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTFLRQQHCHWSLPTGRARTVEC*PGLLMR Trigger: CCTCATCAGCAAACCAGGCCAGCATTCCACAGTCCT...GGCACGCCCTGTCGGGAGGCTCCAGTGGCAGTGCTGCTGCCTCAGGAAAGTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGACTCAAGACCTGGAGAGGGTTTGTGGCTGCCCAGCAGCCACTGTTTTCTAGGGCATTCAGGACCTaGTCCCAGGGTCGCGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRLKTWRGFVAAQQPLFSRAFRT*SQGRAC Trigger: GCAGGCGCGACCCTGGGACCAGGTCCTGAATGCCCT...AGAAAACAGTGGCTGCTGGGCAGCCACAAACCCTCTCCAGGTCTTGAGTCTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCACTGCAGCCCCTGTGGTGGTGGCTGCCTAATTCAGTTCCAGCTCTCACTCTCCTCCGTGCAGACTaGCTCTGTTCCCACAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLQPLWWWLPNSVPALTLLRAD*LCSHRS Trigger: GCTTCTGTGGGAACAGAGCCAGTCTGCACGGAGGAG...AGTGAGAGCTGGAACTGAATTAGGCAGCCACCACCACAGGGGCTGCAGTGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| CDS-3UTR GCA 90 bp | CCACTGTTTTCTGTAGGGTGGGGCTCTGGTGAAGTCCTGGTCAGGACATTAGTTTCCCAGGGTCGCGCCTaGAGGATCAGCTCCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: PLFSVGWGSGEVLVRTLVSQGRA*RISSTT Trigger: GGTGGTGGAGCTGATCCTGCAGGCGCGACCCTGGGA...AACTAATGTCCTGACCAGGACTTCACCAGAGCCCCACCCTACAGAAAACAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGGGTTTGTGGCTGCCCAGCAGCCACTGTTTTCTGTAGGGTGGGGCTCTTGTGGAATGCTGGCCTaGTTTGCTGATGAGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: WRGFVAAQQPLFSVGWGSCGMLA*FADEDS Trigger: AGAGTCCTCATCAGCAAACCAGGCCAGCATTCCACA...AGAGCCCCACCCTACAGAAAACAGTGGCTGCTGGGCAGCCACAAACCCTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| CDS-3UTR TCA 90 bp | TCTCATACAGATGGATGCTGGGCTTCCAGCACAGGCTGGCATCTAGATGCTCCTGACTCTGCTGGGAAGTaGTGCTTCAGGGCATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHTDGCWASSTGWHLDAPDSAGK*CFRAFR Trigger: CCTGAATGCCCTGAAGCATCACTTCCCAGCAGAGTC...AGGAGCATCTAGATGCCAGCCTGTGCTGGAAGCCCAGCATCCATCTGTATGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCCCGTTGGAGGCAAAACCATAGGCCAGTTTACTCTCACCTCTGTCCCTCTGACTCTGCTGGGAAGTaGTGCTTCAGGGCATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSRWRQNHRPVYSHLCPSDSAGK*CFRAFR Trigger: CCTGAATGCCCTGAAGCATCACTTCCCAGCAGAGTC...AGAGGGACAGAGGTGAGAGTAAACTGGCCTATGGTTTTGCCTCCAACGGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| CDS-3UTR TCA 90 bp | TCACCCATGCCTCTAGCTGCACAATGTTATGGCACTACGGGAGAGGCGAGGAAGAGTGAAGCTGGCTGGTaGGGGCCAAGCTTAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SPMPLAAQCYGTTGEARKSEAGW*GPSLAL Trigger: TAAAGCTAAGCTTGGCCCTCACCAGCCAGCTTCACT...CTTCCTCGCCTCTCCCGTAGTGCCATAACATTGTGCAGCTAGAGGCATGGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| CDS-3UTR TCA 90 bp | TCATGGCCTCAAAGGCCATATCATCTCAGTAAGACTCAAGACCTGGAGAGGGTTTCCCACAGAAGCTGCTaGGGCCGCACCGGGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SWPQRPYHLSKTQDLERVSHRSC*GRTGFF Trigger: GAAGAACCCGGTGCGGCCTCAGCAGCTTCTGTGGGA...AACCCTCTCCAGGTCTTGAGTCTTACTGAGATGATATGGCCTTTGAGGCCATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGGATCTGAACTCCGGACCTTCGGAAGAGCAGTCAGCGCTCTTAACCACTTCACACTGTTCTCCTaGTCTGCAGCCGGTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGSELRTFGRAVSALNHFTLFS*SAAGES Trigger: TGACTCACCGGCTGCAGAGCAGGAGAACAGTGTGAA...GTGGTTAAGAGCGCTGACTGCTCTTCCGAAGGTCCGGAGTTCAGATCCCAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226819.2 |
||
| CDS-3UTR TCA 90 bp | GTAAGACTCAAGACCTGGAGAGGGTTTGTGGCTGCCCAGCAGCCACTGTTTTCTGAAGCTCTTGTGCTCTaGCTGGAGGCAGTGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRLKTWRGFVAAQQPLFSEALVL*LEAVLS Trigger: AGAAAGCACTGCCTCCAGTCAGAGCACAAGAGCTTC...AGAAAACAGTGGCTGCTGGGCAGCCACAAACCCTCTCCAGGTCTTGAGTCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| CDS-3UTR GCA 90 bp | CACAGTGAATCAGGTGGCGAACTCATTGAGAGAGATGGCAAGAAATATAAGCTCTCCCAGGGTCGCGCCTaGAGGATCAGCTCCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: HSESGGELIERDGKKYKLSQGRA*RISSTT Trigger: GGTGGTGGAGCTGATCCTGCAGGCGCGACCCTGGGA...GAGCTTATATTTCTTGCCATCTCTCTCAATGAGTTCGCCACCTGATTCACTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGTGTGGCTGAGTACAGGTATGTGTGGAAGGCTAGCACCTGAATGTTCCATCCTGAAGCTCTTGTaGTCTGACTGGAGGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QEVWLSTGMCGRLAPECSILKLL*SDWRQC Trigger: GCACTGCCTCCAGTCAGAGCACAAGAGCTTCAGGAT...GGAACATTCAGGTGCTAGCCTTCCACACATACCTGTACTCAGCCACACCTCCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| CDS-3UTR GCA 90 bp | TCTCATACAGATGGATGCTGGGCTTCCAGCACAGGCTGGCATCTAGATGCTCCTTTCACACTGTTCTCCTaGTCTGCAGCCGGTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHTDGCWASSTGWHLDAPFTLFS*SAAGES Trigger: TGACTCACCGGCTGCAGAGCAGGAGAACAGTGTGAA...AGGAGCATCTAGATGCCAGCCTGTGCTGGAAGCCCAGCATCCATCTGTATGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAAGTGCTACAAAGCTTTCAGCAATGTAGCCAGGCAACTCAAGTCTGGACTAGGGCATTCAGGACCTaGTCCCAGGGTCGCGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FQVLQSFQQCSQATQVWTRAFRT*SQGRAC Trigger: GCAGGCGCGACCCTGGGACCAGGTCCTGAATGCCCT...AGTCCAGACTTGAGTTGCCTGGCTACATTGCTGAAAGCTTTGTAGCACTTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGTAGGGTGGGGCTCTGGTGAAGTCCTGGTCAGGACATTAGTTCTAGTCCTCCTCCGTGCAGACTaGCTCTGTTCCCACAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSVGWGSGEVLVRTLVLVLLRAD*LCSHRS Trigger: GCTTCTGTGGGAACAGAGCCAGTCTGCACGGAGGAG...GACTAGAACTAATGTCCTGACCAGGACTTCACCAGAGCCCCACCCTACAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| CDS-3UTR TCA 90 bp | TTTCAAGTGCTACAAAGCTTTCAGCAATGTAGCCAGGCAACTCAAGTCTGGACTTCCCACAGAAGCTGCTaGGGCCGCACCGGGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FQVLQSFQQCSQATQVWTSHRSC*GRTGFF Trigger: GAAGAACCCGGTGCGGCCTCAGCAGCTTCTGTGGGA...AGTCCAGACTTGAGTTGCCTGGCTACATTGCTGAAAGCTTTGTAGCACTTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTCAAAGGCCATATCATCTCAGTAAGACTCAAGACCTGGAGAGGGTTTGTGGCAGCGCGCAAGGACTaGAGAAACTCCACCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLKGHIISVRLKTWRGFVAARKD*RNSTTF Trigger: GAAAGTGGTGGAGTTTCTGCAGTCCTTGCGCGCTGC...CACAAACCCTCTCCAGGTCTTGAGTCTTACTGAGATGATATGGCCTTTGAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| CDS-3UTR GCA 90 bp | CCACTGTTTTCTGTAGGGTGGGGCTCTGGTGAAGTCCTGGTCAGGACATTAGTTCAGAGGACTGTGGAATaGTGGCCTGGTTTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PLFSVGWGSGEVLVRTLVQRTVE*WPGLLM Trigger: CATCAGCAAACCAGGCCAGCATTCCACAGTCCTCTG...AACTAATGTCCTGACCAGGACTTCACCAGAGCCCCACCCTACAGAAAACAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTGATGGAGTGTGCAGATGCTGCTCATGGCCTCAAAGGCCATATCATCTCAAGGACTGTGGAATGCTaGCCTGGTTTGCTGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVMECADAAHGLKGHIISRTVEC*PGLLMR Trigger: CCTCATCAGCAAACCAGGCCAGCATTCCACAGTCCT...TGAGATGATATGGCCTTTGAGGCCATGAGCAGCATCTGCACACTCCATCACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTCAAAGGCCATATCATCTCAGTAAGACTCAAGACCTGGAGAGGGTTTGTGAGGCTGCAGCTGTCCTaGGGATGTGGCAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLKGHIISVRLKTWRGFVRLQLS*GCGKGF Trigger: AAAGCCTTTGCCACATCCCCAGGACAGCTGCAGCCT...CACAAACCCTCTCCAGGTCTTGAGTCTTACTGAGATGATATGGCCTTTGAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
||
| CDS-3UTR TCA 90 bp | TCAGTTCCAGCTCTCACTCTACTCACCCATGCCTCTAGCTGCACAATGTTATGGGAAGCTCTTGTGCTCTaGCTGGAGGCAGTGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVPALTLLTHASSCTMLWEALVL*LEAVLS Trigger: AGAAAGCACTGCCTCCAGTCAGAGCACAAGAGCTTC...CCATAACATTGTGCAGCTAGAGGCATGGGTGAGTAGAGTGAGAGCTGGAACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| CDS-3UTR GCA 90 bp | CCTCAAAGGCCATATCATCTCAGTAAGACTCAAGACCTGGAGAGGGTTTGTGGCTTCACACTGTTCTCCTaGTCTGCAGCCGGTGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: PQRPYHLSKTQDLERVCGFTLFS*SAAGES Trigger: TGACTCACCGGCTGCAGAGCAGGAGAACAGTGTGAA...GCCACAAACCCTCTCCAGGTCTTGAGTCTTACTGAGATGATATGGCCTTTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| CDS-3UTR GCA 90 bp | CGACTCTATGAAAGATGTTGTCATACCCTCTGGGGAATGTACGGTATCACTCCTGCAGCGCGCAAGGACTaGAGAAACTCCACCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: RLYERCCHTLWGMYGITPAARKD*RNSTTF Trigger: GAAAGTGGTGGAGTTTCTGCAGTCCTTGCGCGCTGC...AGGAGTGATACCGTACATTCCCCAGAGGGTATGACAACATCTTTCATAGAGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| CDS-3UTR CCA 90 bp | TCAGTTCCAGCTCTCACTCTACTCACCCATGCCTCTAGCTGCACAATGTTATGGTGTGGAATGCTGGCCTaGTTTGCTGATGAGGACTCT | + |
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Preference number: 4 (lower is better) Translates to: SVPALTLLTHASSCTMLWCGMLA*FADEDS Trigger: AGAGTCCTCATCAGCAAACCAGGCCAGCATTCCACA...CCATAACATTGTGCAGCTAGAGGCATGGGTGAGTAGAGTGAGAGCTGGAACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| CDS-3UTR CCA 90 bp | CTGTCCCGTTGGAGGCAAAACCATAGGCCAGTTTACTCTCACCTCTGTCCCTCTACAACAGCTTTTCCATaGCAACTAGAAAGGATTCCC | + |
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Preference number: 4 (lower is better) Translates to: LSRWRQNHRPVYSHLCPSTTAFP*QLERIP Trigger: GGGAATCCTTTCTAGTTGCCATGGAAAAGCTGTTGT...AGAGGGACAGAGGTGAGAGTAAACTGGCCTATGGTTTTGCCTCCAACGGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| CDS-3UTR GCA 90 bp | GGCCTCAAAGGCCATATCATCTCAGTAAGACTCAAGACCTGGAGAGGGTTTGTGTCCATACCATACTGGTaGAAAGCAACCGAAGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: GLKGHIISVRLKTWRGFVSIPYW*KATEEV Trigger: CACTTCTTCGGTTGCTTTGCACCAGTATGGTATGGA...CACAAACCCTCTCCAGGTCTTGAGTCTTACTGAGATGATATGGCCTTTGAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| CDS-3UTR GCA 90 bp | CTACACAGACCTATGCAAGTCTTTATTCCCCTTCTTCCCATCAATAGTGAAACACAGAGGACTGTGGAATaGTGGCCTGGTTTGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: LHRPMQVFIPLLPINSETQRTVE*WPGLLM Trigger: CATCAGCAAACCAGGCCAGCATTCCACAGTCCTCTG...TGTTTCACTATTGATGGGAAGAAGGGGAATAAAGACTTGCATAGGTCTGTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| CDS-3UTR CCA 90 bp | GAATCAGGTGGCGAACTCATTGAGAGAGATGGCAAGAAATATAAGCTCTTCTACGAGGACTCTCTTCCATaGGCTCTATCAGATTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: ESGGELIERDGKKYKLFYEDSLP*ALSDSL Trigger: CAGGGAATCTGATAGAGCCCATGGAAGAGAGTCCTC...GTAGAAGAGCTTATATTTCTTGCCATCTCTCTCAATGAGTTCGCCACCTGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR CAA 72 bp | AACTCAAGTCTGGACTTCCTCTTCTTTTCCACTAAATaGCATGCAGAGCTGCAGCAGAAGATGGACAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: NSSLDFLFFSTK*HAELQQKMDRV Trigger: CACTCTGTCCATCTTCTGCTGCAGCTCTGCATGCAATTTAGTGGAAAAGAAGAGGAAGTCCAGACTTGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| CDS-3UTR CCA 90 bp | CGACTCTATGAAAGATGTTGTCATACCCTCTGGGGAATGTACGGTATCACTCCTACAACAGCTTTTCCATaGCAACTAGAAAGGATTCCC | + |
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Preference number: 4 (lower is better) Translates to: RLYERCCHTLWGMYGITPTTAFP*QLERIP Trigger: GGGAATCCTTTCTAGTTGCCATGGAAAAGCTGTTGT...AGGAGTGATACCGTACATTCCCCAGAGGGTATGACAACATCTTTCATAGAGTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| CDS-3UTR CCA 90 bp | TCAGTTCCAGCTCTCACTCTACTCACCCATGCCTCTAGCTGCACAATGTTATGGTGTAGTCACAAAACATaGGGATATAGGTGTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: SVPALTLLTHASSCTMLWCSHKT*GYRCQT Trigger: AGTTTGACACCTATATCCCCATGTTTTGTGACTACA...CCATAACATTGTGCAGCTAGAGGCATGGGTGAGTAGAGTGAGAGCTGGAACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| CDS-3UTR GCA 90 bp | GAATCAGGTGGCGAACTCATTGAGAGAGATGGCAAGAAATATAAGCTCTTCTACTCCATACCATACTGGTaGAAAGCAACCGAAGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: ESGGELIERDGKKYKLFYSIPYW*KATEEV Trigger: CACTTCTTCGGTTGCTTTGCACCAGTATGGTATGGA...GTAGAAGAGCTTATATTTCTTGCCATCTCTCTCAATGAGTTCGCCACCTGATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR CAA 72 bp | ATCACGTGTCTAAACAGCTTAGACGTTCTTCTATACTaGAAACACTCTCATACAGATGGATGCTGGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: ITCLNSLDVLLY*KHSHTDGCWAS Trigger: GGAAGCCCAGCATCCATCTGTATGAGAGTGTTTCAAGTATAGAAGAACGTCTAAGCTGTTTAGACACGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| 3UTR CAA 72 bp | TCTAGGTACCCTTTATTTATAATAGGAAGGTCACAGTaGAGGCATGGATTATATGAAAGCACAAAAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SRYPLFIIGRSQ*RHGLYESTKAA Trigger: AGCAGCTTTTGTGCTTTCATATAATCCATGCCTCAACTGTGACCTTCCTATTATAAATAAAGGGTACCTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| CDS GCA 90 bp | GCAGCAGCGCGCAAGGACTGCAGAAACTCCACCACTTTCGGGAAGTaGTCTACGCGGCGACGGCGGACTACCAGCCAGCTGGCGGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: AAARKDCRNSTTFGK*STRRRRTTSQLAAA Trigger: TGCCGCCGCCAGCTGGCTGGTAGTCCGCCGTCGCCGCGTAGAGCACTTCCCGAAAGTGGTGGAGTTTCTGCAGTCCTTGCGCGCTGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007733.8 ENSMUST00000226314.2 ENSMUST00000227842.2 |
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| CDS-3UTR CAA 90 bp | CCCAGTAGACCCAAGAAGCCTACTTTCCTGAGGCAGCAGCACTGCCACTGGAGCGACAGCACTGGTTTCTaGACTGTAAGAGGCGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: PSRPKKPTFLRQQHCHWSDSTGF*TVRGGD Trigger: ATCACCGCCTCTTACAGTCAAGAAACCAGTGCTGTC...GCTCCAGTGGCAGTGCTGCTGCCTCAGGAAAGTAGGCTTCTTGGGTCTACTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| CDS GCA 90 bp | TGGCTGGTGAGGGCCAAGCTTAGCTTTAGGCAGAGGACTGTGGAATaGTGGCCTGGTTTGCTGATGAGGACTCTCTTCCATGGGCTCTAT | + |
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Preference number: 5 (lower is better) Translates to: WLVRAKLSFRQRTVE*WPGLLMRTLFHGLY Trigger: ATAGAGCCCATGGAAGAGAGTCCTCATCAGCAAACCAGGCCAGCATTCCACAGTCCTCTGCCTAAAGCTAAGCTTGGCCCTCACCAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007733.8 ENSMUST00000226314.2 ENSMUST00000227842.2 |
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| CDS CCA 90 bp | CTGGTGAGGGCCAAGCTTAGCTTTAGGCAGAGGACTGTGGAATGCTaGCCTGGTTTGCTGATGAGGACTCTCTTCCATGGGCTCTATCAG | + |
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Preference number: 5 (lower is better) Translates to: LVRAKLSFRQRTVEC*PGLLMRTLFHGLYQ Trigger: CTGATAGAGCCCATGGAAGAGAGTCCTCATCAGCAAACCAGGCCAGCATTCCACAGTCCTCTGCCTAAAGCTAAGCTTGGCCCTCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007733.8 ENSMUST00000226314.2 ENSMUST00000227842.2 |
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| CDS TCA 90 bp | GAGGCCGCACCGGGTTCTTCCCTGCTTTTAGGGTTAGATAAGTCTTaGGCTGGTAAGCCCATGTTCCTAAATGGGAGTAGCATGACTGTG | + |
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Preference number: 5 (lower is better) Translates to: EAAPGSSLLLGLDKS*AGKPMFLNGSSMTV Trigger: CACAGTCATGCTACTCCCATTTAGGAACATGGGCTTACCAGCTCAAGACTTATCTAACCCTAAAAGCAGGGAAGAACCCGGTGCGGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007733.8 ENSMUST00000227842.2 |
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| CDS CCA 90 bp | CCCATGTTCCTAAATGGGAGTAGCATGACTGTGGGCCGCTCTTTATaGCACGCCTTTGCCGATGTCCAATGTGATCGGGATTTTCGCTTT | + |
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Preference number: 5 (lower is better) Translates to: PMFLNGSSMTVGRSL*HAFADVQCDRDFRF Trigger: AAAGCGAAAATCCCGATCACATTGGACATCGGCAAAGGCGTGCCATAAAGAGCGGCCCACAGTCATGCTACTCCCATTTAGGAACATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007733.8 ENSMUST00000227842.2 |
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| CDS TCA 90 bp | AGCCCGGCTGACTCCAACTTAGAGCATCCTGAAGCTCTTGTGCTCTaGCTGGAGGCAGTGCTTTCTCTAGCTGACACAAGTATTCAAACA | + |
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Preference number: 5 (lower is better) Translates to: SPADSNLEHPEALVL*LEAVLSLADTSIQT Trigger: TGTTTGAATACTTGTGTCAGCTAGAGAAAGCACTGCCTCCAGTCAGAGCACAAGAGCTTCAGGATGCTCTAAGTTGGAGTCAGCCGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007733.8 ENSMUST00000227842.2 ENSMUST00000227873.2 |
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| CDS-3UTR CAA 90 bp | GCAGTGATGGAGTGTGCAGATGCTGCTCATGGCCTCAAAGGCCATATCATCTCATCCTGTCTTCTTTTGTaGTTCTGGACTCTGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: AVMECADAAHGLKGHIISSCLLL*FWTLLG Trigger: TCCCAGCAGAGTCCAGAACAACAAAAGAAGACAGGA...TGAGATGATATGGCCTTTGAGGCCATGAGCAGCATCTGCACACTCCATCACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| CDS-3UTR CAA 90 bp | CCACTGTTTTCTGTAGGGTGGGGCTCTGGTGAAGTCCTGGTCAGGACATTAGTTGCTTCCTGTCTTCTTTaGTTGTTCTGGACTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: PLFSVGWGSGEVLVRTLVASCLL*LFWTLL Trigger: CAGCAGAGTCCAGAACAACAAAAGAAGACAGGAAGC...AACTAATGTCCTGACCAGGACTTCACCAGAGCCCCACCCTACAGAAAACAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227842.2 |
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| CDS-3UTR CAA 90 bp | CGACTCTATGAAAGATGTTGTCATACCCTCTGGGGAATGTACGGTATCACTCCTTCCTGTCTTCTTTTGTaGTTCTGGACTCTGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: RLYERCCHTLWGMYGITPSCLLL*FWTLLG Trigger: TCCCAGCAGAGTCCAGAACAACAAAAGAAGACAGGA...AGGAGTGATACCGTACATTCCCCAGAGGGTATGACAACATCTTTCATAGAGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| CDS-3UTR CAA 90 bp | AGCCAGGCAACTCAAGTCTGGACTTCCTCTTCTTTTCCACTAAATTGCATGCAGGCTTCCTGTCTTCTTTaGTTGTTCTGGACTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: SQATQVWTSSSFPLNCMQASCLL*LFWTLL Trigger: CAGCAGAGTCCAGAACAACAAAAGAAGACAGGAAGC...CTGCATGCAATTTAGTGGAAAAGAAGAGGAAGTCCAGACTTGAGTTGCCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007733.8 |
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| CDS CCA 90 bp | GTGCTTTCTCTAGCTGACACAAGTATTCAAACAACAGCTTTTCCATaGCAACTAGAAAGGATTCCCCATAGTCTTGTTCTAGTTCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: VLSLADTSIQTTAFP*QLERIPHSLVLVPA Trigger: TGCAGGAACTAGAACAAGACTATGGGGAATCCTTTCTAGTTGCCATGGAAAAGCTGTTGTTTGAATACTTGTGTCAGCTAGAGAAAGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007733.8 ENSMUST00000227842.2 ENSMUST00000227873.2 |
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| CDS GCA 72 bp | CGCAAGGACTGCAGAAACTCCACCACTTTCGGGAAGTaGTCTACGCGGCGACGGCGGACTACCAGCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: RKDCRNSTTFGK*STRRRRTTSQL Trigger: CAGCTGGCTGGTAGTCCGCCGTCGCCGCGTAGAGCACTTCCCGAAAGTGGTGGAGTTTCTGCAGTCCTTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007733.8 ENSMUST00000226314.2 ENSMUST00000227842.2 |
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| CDS GCA 72 bp | TTCAGGGCATTCAGGACCTGGTCCCAGGGTCGCGCCTaGAGGATCAGCTCCACCACCACCTTGGCCTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: FRAFRTWSQGRA*RISSTTTLAFR Trigger: CCTAAAGGCCAAGGTGGTGGTGGAGCTGATCCTGCAGGCGCGACCCTGGGACCAGGTCCTGAATGCCCTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007733.8 ENSMUST00000226314.2 ENSMUST00000227842.2 |
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| CDS CCA 72 bp | AGGGTCGCGCCTGCAGGATCAGCTCCACCACCACCTTaGCCTTTAGGCTCATACACAGGCGTTCATGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: RVAPAGSAPPPP*PLGSYTGVHGA Trigger: GGCACCATGAACGCCTGTGTATGAGCCTAAAGGCCAAGGTGGTGGTGGAGCTGATCCTGCAGGCGCGACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007733.8 ENSMUST00000226314.2 ENSMUST00000227842.2 |
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| CDS TCA 72 bp | CTCCGTGCAGACTGGCTCTGTTCCCACAGAAGCTGCTaGGGCCGCACCGGGTTCTTCCCTGCTTTTAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LRADWLCSHRSC*GRTGFFPAFRV Trigger: AACCCTAAAAGCAGGGAAGAACCCGGTGCGGCCTCAGCAGCTTCTGTGGGAACAGAGCCAGTCTGCACGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007733.8 ENSMUST00000227842.2 |
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| CDS GCA 72 bp | AGTTCCTGCAGGCTCGAAGGCGGGTCCTCTGACAGGTaGTTCACAAGCAAGCAAAAATTTTCCCGTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSCRLEGGSSDR*FTSKQKFSRAS Trigger: GGAGGCACGGGAAAATTTTTGCTTGCTTGTGAAGCACCTGTCAGAGGACCCGCCTTCGAGCCTGCAGGAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000007733.8 ENSMUST00000227842.2 ENSMUST00000227873.2 |
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| CDS TCA 72 bp | CTGTCTTCTTTTGTTGTTCTGGACTCTGCTGGGAAGTaGTGCTTCAGGGCATTCAGGACCTGGTCCCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LSSFVVLDSAGK*CFRAFRTWSQG Trigger: ACCCTGGGACCAGGTCCTGAATGCCCTGAAGCATCACTTCCCAGCAGAGTCCAGAACAACAAAAGAAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007733.8 ENSMUST00000226314.2 ENSMUST00000227842.2 ENSMUST00000227873.2 |
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| CDS GCA 72 bp | TCTGGAAATGTCCACCCCATGTCCATACCATACTGGTaGAAAGCAACCGAAGAAGTGATGAACGAGCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: SGNVHPMSIPYW*KATEEVMNEPG Trigger: GCCGGGCTCGTTCATCACTTCTTCGGTTGCTTTGCACCAGTATGGTATGGACATGGGGTGGACATTTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007733.8 ENSMUST00000226314.2 ENSMUST00000227842.2 ENSMUST00000227873.2 |
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| CDS GCA 72 bp | AGGGCCAAGCTTAGCTTTAGGCAGAGGACTGTGGAATaGTGGCCTGGTTTGCTGATGAGGACTCTCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: RAKLSFRQRTVE*WPGLLMRTLFH Trigger: ATGGAAGAGAGTCCTCATCAGCAAACCAGGCCAGCATTCCACAGTCCTCTGCCTAAAGCTAAGCTTGGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007733.8 ENSMUST00000226314.2 ENSMUST00000227842.2 |
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| CDS CCA 72 bp | CTAAATGGGAGTAGCATGACTGTGGGCCGCTCTTTATaGCACGCCTTTGCCGATGTCCAATGTGATCGGGAT | + |
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Preference number: 6 (lower is better) Translates to: LNGSSMTVGRSL*HAFADVQCDRD Trigger: ATCCCGATCACATTGGACATCGGCAAAGGCGTGCCATAAAGAGCGGCCCACAGTCATGCTACTCCCATTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007733.8 ENSMUST00000227842.2 |
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| CDS CCA 72 bp | CAAGTCCCCTATGGTAATAACAGAGCTACACGGGGTTaGGGACAGCACTGGTTTCTTGACTGTAAGAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: QVPYGNNRATRG*GQHWFLDCKRR Trigger: CCGCCTCTTACAGTCAAGAAACCAGTGCTGTCCCCAACCCCGTGTAGCTCTGTTATTACCATAGGGGACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007733.8 ENSMUST00000226819.2 ENSMUST00000227842.2 |
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| CDS CAA 72 bp | AGCTTTAGGCAGAGGACTGTGGAATGCTGGCCTGGTTaGCTGATGAGGACTCTCTTCCATGGGCTCTATCAG | + |
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Preference number: 6 (lower is better) Translates to: SFRQRTVECWPG*LMRTLFHGLYQ Trigger: CTGATAGAGCCCATGGAAGAGAGTCCTCATCAGCAAACCAGGCCAGCATTCCACAGTCCTCTGCCTAAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007733.8 ENSMUST00000226314.2 ENSMUST00000227842.2 |
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| CDS TCA 72 bp | TCTTGTGCTCTGACTGGAGGCAGTGCTTTCTCTAGCTaGCACAAGTATTCAAACAACAGCTTTTCCATGGCA | + |
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Preference number: 6 (lower is better) Translates to: SCALTGGSAFSS*HKYSNNSFSMA Trigger: TGCCATGGAAAAGCTGTTGTTTGAATACTTGTGTCAGCTAGAGAAAGCACTGCCTCCAGTCAGAGCACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007733.8 ENSMUST00000227842.2 ENSMUST00000227873.2 |
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