Pregenerated sensors for TINAGL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028776Ensembl transcript IDs: ENSMUST00000030560.9, ENSMUST00000105998.8, ENSMUST00000105999.9, ENSMUST00000132545.3, ENSMUST00000175992.8
Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTaGGATTCTGCCTTAGCGCGCACGCGCGGATCTGAGTCTGTAGAG | + |
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Preference number: 1 (lower is better) Translates to: ISGGFRQPGASLSPR*DSALARTRGSESVE Trigger: CTCTACAGACTCAGATCCGCGCGTGCGCGCTAAGGCAGAATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| 3UTR GCA 90 bp | GTCTTGGCCTGGCTGACCAGGGACCTGGAATCTGTCTATACTCCCTaGAGTTTCCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCT | + |
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Preference number: 1 (lower is better) Translates to: VLAWLTRDLESVYTP*SFQTGPFPVPAVIS Trigger: AGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAGCCAGGCCAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| 3UTR CAA 90 bp | GTTCCGGCTGTGATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTaGTCTCCTAGGTGGGATTCTGCCTTAGCGCGCACGCGCGGATCT | + |
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Preference number: 2 (lower is better) Translates to: VPAVISGGFRQPGAS*SPRWDSALARTRGS Trigger: AGATCCGCGCGTGCGCGCTAAGGCAGAATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATATCACAGCCGGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCGATCATGGGAAGCAGTCCTTTTATGTGGCACCCACACCTGGTGGCCACAGGGCTGGGACCTGGGATaGGAGAACAGGAGACCTGGT | + |
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Preference number: 2 (lower is better) Translates to: GRSWEAVLLCGTHTWWPQGWDLG*ENRRPG Trigger: ACCAGGTCTCCTGTTCTCCCATCCCAGGTCCCAGCC...CTGTGGCCACCAGGTGTGGGTGCCACATAAAAGGACTGCTTCCCATGATCGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
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| 3UTR-3UTR CCA 90 bp | CCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCAGCCTCTTTGTCTCCTAGGTaGGATTCTGCCTTAGCGCGC | + |
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Preference number: 2 (lower is better) Translates to: PNRALPSSGCDIWGLPPASLSPR*DSALAR Trigger: GCGCGCTAAGGCAGAATCCCACCTAGGAGACAAAGA...GGCTGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| 3UTR-3UTR CCA 90 bp | GGTAGGAGGGTGATGAGGTTGGGGTGTCTTAGCTCCTGTGGTCTTGGCCTGGCTCCTCTTCTGTGGCTGTaGATCCCACCTCGCCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: GRRVMRLGCLSSCGLGLAPLLWL*IPPRLV Trigger: CACTAGGCGAGGTGGGATCCACAGCCACAGAAGAGG...AGCCAGGCCAAGACCACAGGAGCTAAGACACCCCAACCTCATCACCCTCCTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCACACCTGGTGGCCACAGTTAATGGCCTTGATTGCTAGGTCCCTGGGAAGAGTAGGTGTGCACCACTaGGGCACAGGGTTAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: THTWWPQLMALIARSLGRVGVHH*GTGLGG Trigger: GCCTCCTAACCCTGTGCCTCAGTGGTGCACACCTAC...TCTTCCCAGGGACCTAGCAATCAAGGCCATTAACTGTGGCCACCAGGTGTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCACACCTGGTGGCCACAGTTAATGGCCTTGATTGCTAGGTCCCTGGGAAGACCAAGGCCTCTTCTGTaGCTGTGGATCCCACCTCGC | + |
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Preference number: 2 (lower is better) Translates to: THTWWPQLMALIARSLGRPRPLL*LWIPPR Trigger: GCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGG...TCTTCCCAGGGACCTAGCAATCAAGGCCATTAACTGTGGCCACCAGGTGTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
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| 3UTR-3UTR CCA 90 bp | CTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAACAGGGCCCCCAAGGCCTCTTCTGTaGCTGTGGATCCCACCTCGC | + |
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Preference number: 2 (lower is better) Translates to: LTRDLESVYTPCSFQTGPPRPLL*LWIPPR Trigger: GCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGG...GGGCCCTGTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGCCACAGTTAATGGCCTTGATTGCTAGGTCCCTGGGAAGATCTTATCAGAGCCCAGGCTGGCCTTaGACTTGCTCTGTAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: WWPQLMALIARSLGRSYQSPGWP*TCSVAS Trigger: GGAGGCTACAGAGCAAGTTCAAGGCCAGCCTGGGCT...CTGATAAGATCTTCCCAGGGACCTAGCAATCAAGGCCATTAACTGTGGCCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGCAGAGAGGGCTCCTGAGGCTGTCATATTCTGACAGGTTTCACGTAGCCTGTCACACAGGTCCCTaGGTCCTGGAAATTAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: EEQRGLLRLSYSDRFHVACHTGP*VLEIRL Trigger: CAGCCTAATTTCCAGGACGCAGGGACCTGTGTGACA...GGCTACGTGAAACCTGTCAGAATATGACAGCCTCAGGAGCCCTCTCTGCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
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| 3UTR-3UTR CCA 90 bp | GAACAGAGAGGAAAAGAGAGAGCCAACTGGGGCGATCATGGGAAGCAGTCCTTTCCTCTTCTGTGGCTGTaGATCCCACCTCGCCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: EQRGKERANWGDHGKQSFPLLWL*IPPRLV Trigger: CACTAGGCGAGGTGGGATCCACAGCCACAGAAGAGG...AAAGGACTGCTTCCCATGATCGCCCCAGTTGGCTCTCTCTTTTCCTCTCTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGCTAGGGAGATGGACAGAATTCATCAAAAAGAAGATGAGAGAGAGGGTGCCTCTTCTGTGGCTGTaGATCCCACCTCGCCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: WRLGRWTEFIKKKMRERVPLLWL*IPPRLV Trigger: CACTAGGCGAGGTGGGATCCACAGCCACAGAAGAGG...CACCCTCTCTCTCATCTTCTTTTTGATGAATTCTGTCCATCTCCCTAGCCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAAATGGAGGCTAGGGAGATGGACAGAATTCATCAAAAAGAAGATGAGAGAGTCTTTGTCTCCTAGGTaGGATTCTGCCTTAGCGCGC | + |
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Preference number: 2 (lower is better) Translates to: PKWRLGRWTEFIKKKMRESLSPR*DSALAR Trigger: GCGCGCTAAGGCAGAATCCCACCTAGGAGACAAAGA...CTCTCTCATCTTCTTTTTGATGAATTCTGTCCATCTCCCTAGCCTCCATTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| 3UTR-3UTR GCA 90 bp | CCAAAATGGAGGCTAGGGAGATGGACAGAATTCATCAAAAAGAAGATGAGAGAGTCTGTCTATACTCCCTaGAGTTTCCAAACAGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: PKWRLGRWTEFIKKKMRESVYTP*SFQTGP Trigger: GGGCCCTGTTTGGAAACTGCAGGGAGTATAGACAGA...CTCTCTCATCTTCTTTTTGATGAATTCTGTCCATCTCCCTAGCCTCCATTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| 3UTR CCA 72 bp | CCTGGTCCCGAAGTGCACACAAGGCTTCATCGGGCATaGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCA | + |
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Preference number: 3 (lower is better) Translates to: PGPEVHTRLHRA*PPRPLLWLWIP Trigger: TGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGTGTGCACTTCGGGACCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| 3UTR CCA 72 bp | GGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTaGGATTCTGCCTTAGCGCGCACGCGCGGATCTGAG | + |
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Preference number: 3 (lower is better) Translates to: GFRQPGASLSPR*DSALARTRGSE Trigger: CTCAGATCCGCGCGTGCGCGCTAAGGCAGAATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| 3UTR CCA 72 bp | CTTGTCACACAGGTCCCTGCGTCCTGGAAATTAGGCTaGGACCTGGGATGGGAGAACAGGAGACCTGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: LVTQVPASWKLG*DLGWENRRPGP Trigger: GGGACCAGGTCTCCTGTTCTCCCATCCCAGGTCCCAGCCTAATTTCCAGGACGCAGGGACCTGTGTGACAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
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| 3UTR CCA 72 bp | AGGGTTAGGAGGCTTGTCACACAGGTCCCTGCGTCCTaGAAATTAGGCTGGGACCTGGGATGGGAGAACAGG | + |
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Preference number: 3 (lower is better) Translates to: RVRRLVTQVPAS*KLGWDLGWENR Trigger: CCTGTTCTCCCATCCCAGGTCCCAGCCTAATTTCCAGGACGCAGGGACCTGTGTGACAAGCCTCCTAACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
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| 3UTR GCA 72 bp | TGGCTGACCAGGGACCTGGAATCTGTCTATACTCCCTaGAGTTTCCAAACAGGGCCCTTCCCAGTTCCGGCT | + |
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Preference number: 3 (lower is better) Translates to: WLTRDLESVYTP*SFQTGPFPVPA Trigger: AGCCGGAACTGGGAAGGGCCCTGTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| 3UTR TCA 72 bp | CCAGCACCAAGTACTGTGATTGTAGGTGTGCACCACTaGGGCACAGGGTTAGGAGGCTTGTCACACAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: PAPSTVIVGVHH*GTGLGGLSHRS Trigger: GGACCTGTGTGACAAGCCTCCTAACCCTGTGCCTCAGTGGTGCACACCTACAATCACAGTACTTGGTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
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| 3UTR CCA 72 bp | TGGGAAGCAGTCCTTTTATGTGGCACCCACACCTGGTaGCCACAGTTAATGGCCTTGATTGCTAGGTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: WEAVLLCGTHTW*PQLMALIARSL Trigger: CAGGGACCTAGCAATCAAGGCCATTAACTGTGGCCACCAGGTGTGGGTGCCACATAAAAGGACTGCTTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
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| 3UTR TCA 72 bp | AGAATTGCCTATAAGCCACCAACAGTTCTCATCATTTaGGGAGCAGAGAGGGCTCCTGAGGCTGTCATATTC | + |
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Preference number: 3 (lower is better) Translates to: RIAYKPPTVLII*GAERAPEAVIF Trigger: GAATATGACAGCCTCAGGAGCCCTCTCTGCTCCTCAAATGATGAGAACTGTTGGTGGCTTATAGGCAATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
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| 3UTR CCA 72 bp | AATGGAAAGGTACAACCAAAATGGAGGCTAGGGAGATaGACAGAATTCATCAAAAAGAAGATGAGAGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: NGKVQPKWRLGR*TEFIKKKMRER Trigger: CCTCTCTCTCATCTTCTTTTTGATGAATTCTGTCCATCTCCCTAGCCTCCATTTTGGTTGTACCTTTCCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| 3UTR CCA 72 bp | GAAAGCAGTACTGAGAATGGAAAGGTACAACCAAAATaGAGGCTAGGGAGATGGACAGAATTCATCAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: ESSTENGKVQPK*RLGRWTEFIKK Trigger: CTTTTTGATGAATTCTGTCCATCTCCCTAGCCTCCATTTTGGTTGTACCTTTCCATTCTCAGTACTGCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR GCA 90 bp | CTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCGGATGCCCCGCAGGTaGAGCCCTGGCGCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LHRAWPPRPLLWLWIPPRRMPRR*SPGASS Trigger: GGAGCTGGCGCCAGGGCTGCACCTGCGGGGCATCCG...GCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR GCA 90 bp | TTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCCACCGGCGTCCCGGATaGCCCGCAGGTGCAGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: FIGHGPQGLFCGCGSHLAHRRPG*PAGAAL Trigger: CAGGGCTGCACCTGCGGGGCATCCGGGACGCCGGTG...GGCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR GCA 90 bp | CACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCCGGATGCCCCGCAGGTaGAGCCCTGGCGCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: HKASSGMAPKASSVAVDPRMPRR*SPGASS Trigger: GGAGCTGGCGCCAGGGCTGCACCTGCGGGGCATCCG...GGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR CCA 90 bp | CGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCTAGTGCAGCGGGAAGTGGCTTaGCGCTTGCCCCGCCCCATG | + |
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Preference number: 4 (lower is better) Translates to: RAWPPRPLLWLWIPPRLVQREVA*RLPRPM Trigger: CATGGGGCGGGGCAAGCGCCAAGCCACTTCCCGCTG...CACTAGGCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR CCA 90 bp | CTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCCCCAGAAGGCACTGTaGTTCCCAGCCTGCCACCCG | + |
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Preference number: 4 (lower is better) Translates to: LHRAWPPRPLLWLWIPPRPQKAL*FPACHP Trigger: CGGGTGGCAGGCTGGGAACCACAGTGCCTTCTGGGG...GCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 |
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| CDS-3UTR CCA 90 bp | CACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCCAGCGGGAAGTGGCTTaGCGCTTGCCCCGCCCCATG | + |
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Preference number: 4 (lower is better) Translates to: HKASSGMAPKASSVAVDPQREVA*RLPRPM Trigger: CATGGGGCGGGGCAAGCGCCAAGCCACTTCCCGCTG...GGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR TCA 90 bp | CTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCGGCGGTAGGCAGGCGTaGCCTGGTAGATGTCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LHRAWPPRPLLWLWIPPRGGRQA*PGRCRW Trigger: CCAACGACATCTACCAGGTCACGCCTGCCTACCGCC...GCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR GCA 90 bp | TGTGGCACCCACACCTGGTGGCCACAGTTAATGGCCTTGATTGCTAGGTCCCTGCGGATGCCCCGCAGGTaGAGCCCTGGCGCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: CGTHTWWPQLMALIARSLRMPRR*SPGASS Trigger: GGAGCTGGCGCCAGGGCTGCACCTGCGGGGCATCCG...CAGGGACCTAGCAATCAAGGCCATTAACTGTGGCCACCAGGTGTGGGTGCCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
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| CDS-3UTR GCA 90 bp | CACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCTCCGGCCCCCATGCATaGACCCTTGGACGGGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: HKASSGMAPKASSVAVDPSGPHA*TLGREG Trigger: TCCCTCCCGTCCAAGGGTGCATGCATGGGGGCCGGA...GGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR GCA 90 bp | CGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCTAGTGAGGATGGGCGGATTGTaGCCAGGCGGTAGCGAATGC | + |
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Preference number: 4 (lower is better) Translates to: RAWPPRPLLWLWIPPRLVRMGGL*PGGSEC Trigger: GCATTCGCTACCGCCTGGGCACAATCCGCCCATCCT...CACTAGGCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR CCA 90 bp | CGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCTAGTGCAGCCCTGCTGGTGGTaGGTATCACAGGACAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RAWPPRPLLWLWIPPRLVQPCWW*VSQDSR Trigger: CCTGCTGTCCTGTGATACCCACCACCAGCAGGGCTG...CACTAGGCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR CCA 90 bp | CTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCCTCGGCAGCCCTGCTaGTGGTGGGTATCACAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LHRAWPPRPLLWLWIPPRPRQPC*WWVSQD Trigger: GTCCTGTGATACCCACCACCAGCAGGGCTGCCGAGG...GCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR CCA 90 bp | GCACCACTGAGGCACAGGGTTAGGAGGCTTGTCACACAGGTCCCTGCGTCCTGGGCTTGCCCCGCCCCATaGCGCGGCTGTGCATCATAC | + |
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Preference number: 4 (lower is better) Translates to: APLRHRVRRLVTQVPASWACPAP*RGCASY Trigger: GTATGATGCACAGCCGCGCCATGGGGCGGGGCAAGC...CCAGGACGCAGGGACCTGTGTGACAAGCCTCCTAACCCTGTGCCTCAGTGGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
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| CDS-3UTR CCA 90 bp | TTGGGGTGTCTTAGCTCCTGTGGTCTTGGCCTGGCTGACCAGGGACCTGGAATCTGGGGCAGCGGGAAGTaGCTTGGCGCTTGCCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LGCLSSCGLGLADQGPGIWGSGK*LGACPA Trigger: GGCGGGGCAAGCGCCAAGCCACTTCCCGCTGCCCCA...GATTCCAGGTCCCTGGTCAGCCAGGCCAAGACCACAGGAGCTAAGACACCCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR CCA 90 bp | TTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCCCTTTCACCCCACCATaGGCCCCACGAGTTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FIGHGPQGLFCGCGSHLAPFTPP*APRVGS Trigger: GCTGCCAACTCGTGGGGCCCATGGTGGGGTGAAAGG...GGCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR CCA 90 bp | CGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCTAGTGCGATGTCGCACTCGTTaGTGCCACGCACGATCCGGA | + |
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Preference number: 4 (lower is better) Translates to: RAWPPRPLLWLWIPPRLVRCRTR*CHARSG Trigger: TCCGGATCGTGCGTGGCACCAACGAGTGCGACATCG...CACTAGGCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR GCA 90 bp | ATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTGGGATTCTCGGATGCCCCGCAGGTaGAGCCCTGGCGCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ISGGFRQPGASLSPRWDSRMPRR*SPGASS Trigger: GGAGCTGGCGCCAGGGCTGCACCTGCGGGGCATCCG...AGAATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR GCA 90 bp | ACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCATCCGGCCCCCATGCATaGACCCTTGGACGGGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: TRLHRAWPPRPLLWLWIPSGPHA*TLGREG Trigger: TCCCTCCCGTCCAAGGGTGCATGCATGGGGGCCGGA...TGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR GCA 90 bp | TTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCCCAGGCGGTAGCGAATaGCCTCATCCAGGGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: FIGHGPQGLFCGCGSHLAPGGSE*PHPGSC Trigger: GCATGACCCTGGATGAGGGCATTCGCTACCGCCTGG...GGCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCTTGTCACACAGGTCCCTGCGTCCTGGAAATTAGGCTGGGACCTGGGATGGCCTCCAGGGCAGCCTaGCCAGCCAGCAGCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EACHTGPCVLEIRLGPGMASRAA*PASSSK Trigger: CTTGCTGCTGCTGGCTGGCCAGGCTGCCCTGGAGGC...CATCCCAGGTCCCAGCCTAATTTCCAGGACGCAGGGACCTGTGTGACAAGCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR CCA 90 bp | ACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCCCAGAAGGCACTGTaGTTCCCAGCCTGCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: TRLHRAWPPRPLLWLWIPPQKAL*FPACHP Trigger: CGGGTGGCAGGCTGGGAACCACAGTGCCTTCTGGGG...TGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 |
||
| CDS-3UTR CCA 90 bp | CCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCAGCCCAGCCCTGCTGGTGGTaGGTATCACAGGACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PNRALPSSGCDIWGLPPAQPCWW*VSQDSR Trigger: CCTGCTGTCCTGTGATACCCACCACCAGCAGGGCTG...GGCTGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCCCTCGGCAGCCCTGCTaGTGGTGGGTATCACAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HKASSGMAPKASSVAVDPPRQPC*WWVSQD Trigger: GTCCTGTGATACCCACCACCAGCAGGGCTGCCGAGG...GGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCTCCTAGGTGGGATTCTGCCTTAGCGCGCACGCGCGGATCTGAGTCTGTATGGGGCAGCGGGAAGTaGCTTGGCGCTTGCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSPRWDSALARTRGSESVWGSGK*LGACPA Trigger: GGCGGGGCAAGCGCCAAGCCACTTCCCGCTGCCCCA...TACAGACTCAGATCCGCGCGTGCGCGCTAAGGCAGAATCCCACCTAGGAGACAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCCGCACGATCCGGAAGTaGCCCCTTTCACCCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: FIGHGPQGLFCGCGSHLARTIRK*PLSPHH Trigger: ATGGTGGGGTGAAAGGGGCCACTTCCGGATCGTGCG...GGCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCCGATGTCGCACTCGTTaGTGCCACGCACGATCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FIGHGPQGLFCGCGSHLARCRTR*CHARSG Trigger: TCCGGATCGTGCGTGGCACCAACGAGTGCGACATCG...GGCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGGTGTCTTAGCTCCTGTGGTCTTGGCCTGGCTGACCAGGGACCTGGAATCTCCGGCCCCCATGCATaGACCCTTGGACGGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGCLSSCGLGLADQGPGISGPHA*TLGREG Trigger: TCCCTCCCGTCCAAGGGTGCATGCATGGGGGCCGGA...GATTCCAGGTCCCTGGTCAGCCAGGCCAAGACCACAGGAGCTAAGACACCCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | TTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCCCTCATCCAGGGTCATaGCCCAGAAGGCACTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FIGHGPQGLFCGCGSHLAPHPGS*PRRHCG Trigger: ACCACAGTGCCTTCTGGGGCATGACCCTGGATGAGG...GGCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | CCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCAGCCCCTCATCCAGGGTCATaGCCCAGAAGGCACTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PNRALPSSGCDIWGLPPAPHPGS*PRRHCG Trigger: ACCACAGTGCCTTCTGGGGCATGACCCTGGATGAGG...GGCTGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GTGATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTGGGATGCCTCCAGGGCAGCCTaGCCAGCCAGCAGCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VISGGFRQPGASLSPRWDASRAA*PASSSK Trigger: CTTGCTGCTGCTGGCTGGCCAGGCTGCCCTGGAGGC...ATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATATCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTGGGATTCTGGCCTCCAGGGCAGCCTaGCCAGCCAGCAGCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YLGASASLVHLCLLGGILASRAA*PASSSK Trigger: CTTGCTGCTGCTGGCTGGCCAGGCTGCCCTGGAGGC...CAGAATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTGTCTCCTAGGTGGGATTCTGCCTTAGCGCGCACGCGCGGATCTGAGTCTCAGCGGGAAGTGGCTTaGCGCTTGCCCCGCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SLSPRWDSALARTRGSESQREVA*RLPRPM Trigger: CATGGGGCGGGGCAAGCGCCAAGCCACTTCCCGCTG...AGACTCAGATCCGCGCGTGCGCGCTAAGGCAGAATCCCACCTAGGAGACAAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GTGATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTGGGATCAGCGGGAAGTGGCTTaGCGCTTGCCCCGCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VISGGFRQPGASLSPRWDQREVA*RLPRPM Trigger: CATGGGGCGGGGCAAGCGCCAAGCCACTTCCCGCTG...ATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATATCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GCACCACTGAGGCACAGGGTTAGGAGGCTTGTCACACAGGTCCCTGCGTCCTGGCGCACGATCCGGAAGTaGCCCCTTTCACCCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: APLRHRVRRLVTQVPASWRTIRK*PLSPHH Trigger: ATGGTGGGGTGAAAGGGGCCACTTCCGGATCGTGCG...CCAGGACGCAGGGACCTGTGTGACAAGCCTCCTAACCCTGTGCCTCAGTGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTCGATGTCGCACTCGTTaGTGCCACGCACGATCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFPVPAVISGGFRQPGASRCRTR*CHARSG Trigger: TCCGGATCGTGCGTGGCACCAACGAGTGCGACATCG...AGATGCACCAGGCTGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | CGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCTAGTGCAGAGACGGTGCGGTTaGAGAAGAGGTCACAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RAWPPRPLLWLWIPPRLVQRRCG*RRGHSN Trigger: GTTACTGTGACCTCTTCTGCAACCGCACCGTCTCTG...CACTAGGCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCATGGTCGCACTCCCAATaGCCTCCCTCATGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TRLHRAWPPRPLLWLWIPWSHSQ*PPSWQV Trigger: CACCTGCCATGAGGGAGGGCATTGGGAGTGCGACCA...TGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 |
||
| CDS-3UTR GCA 90 bp | GCACCACTGAGGCACAGGGTTAGGAGGCTTGTCACACAGGTCCCTGCGTCCTGGCCTCATCCAGGGTCATaGCCCAGAAGGCACTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: APLRHRVRRLVTQVPASWPHPGS*PRRHCG Trigger: ACCACAGTGCCTTCTGGGGCATGACCCTGGATGAGG...CCAGGACGCAGGGACCTGTGTGACAAGCCTCCTAACCCTGTGCCTCAGTGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGGTGTCTTAGCTCCTGTGGTCTTGGCCTGGCTGACCAGGGACCTGGAAAGGATGGGCGGATTGTaGCCAGGCGGTAGCGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: GWGVLAPVVLAWLTRDLERMGGL*PGGSEC Trigger: GCATTCGCTACCGCCTGGGCACAATCCGCCCATCCT...TTCCAGGTCCCTGGTCAGCCAGGCCAAGACCACAGGAGCTAAGACACCCCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | CGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCTAGTGCCTGCCACCATCGATTaGAGTTGTCCCAGTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RAWPPRPLLWLWIPPRLVPATID*SCPSRF Trigger: GAACCTACTGGGACAACTGCAATCGATGGTGGCAGG...CACTAGGCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | CTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCTGGTCCAATGGCTCGTaGATCAGGTTGGGCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHRAWPPRPLLWLWIPPRWSNGS*IRLGHF Trigger: GAAGTGGCCCAACCTGATCCACGAGCCATTGGACCA...GCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGGTGTCTTAGCTCCTGTGGTCTTGGCCTGGCTGACCAGGGACCTGGAATCCGGCAGCCCTGCTGGTaGTGGGTATCACAGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGCLSSCGLGLADQGPGIRQPCW*WVSQDS Trigger: GCTGTCCTGTGATACCCACCACCAGCAGGGCTGCCG...GATTCCAGGTCCCTGGTCAGCCAGGCCAAGACCACAGGAGCTAAGACACCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GGGCGATCATGGGAAGCAGTCCTTTTATGTGGCACCCACACCTGGTGGCCACAGCCTCGGCAGCCCTGCTaGTGGTGGGTATCACAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRSWEAVLLCGTHTWWPQPRQPC*WWVSQD Trigger: GTCCTGTGATACCCACCACCAGCAGGGCTGCCGAGG...CTGTGGCCACCAGGTGTGGGTGCCACATAAAAGGACTGCTTCCCATGATCGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCTAGGTGGGATTCTGCCTTAGCGCGCACGCGCGGATCTGAGTCTGTAGAGCCTCGGCAGCCCTGCTaGTGGTGGGTATCACAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPRWDSALARTRGSESVEPRQPC*WWVSQD Trigger: GTCCTGTGATACCCACCACCAGCAGGGCTGCCGAGG...CTCTACAGACTCAGATCCGCGCGTGCGCGCTAAGGCAGAATCCCACCTAGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGTTTCCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCGCTTGCCCCGCCCCATaGCGCGGCTGTGCATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: CSFQTGPFPVPAVISGGFACPAP*RGCASY Trigger: GTATGATGCACAGCCGCGCCATGGGGCGGGGCAAGC...GAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGGAAACTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAACAGGGCCCTTTGGGGCAGCGGGAAGTaGCTTGGCGCTTGCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: DQGPGICLYSLQFPNRALWGSGK*LGACPA Trigger: GGCGGGGCAAGCGCCAAGCCACTTCCCGCTGCCCCA...AAGGGCCCTGTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCCGCACGATCCGGAAGTaGCCCCTTTCACCCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSGCDIWGLPPAWCIFVRTIRK*PLSPHH Trigger: ATGGTGGGGTGAAAGGGGCCACTTCCGGATCGTGCG...GACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | CACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCCCCAGTGATCTTGACTaGGTGAGTCCCATGTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: HKASSGMAPKASSVAVDPPSDLD*VSPMSA Trigger: CGCAGACATGGGACTCACTCAGTCAAGATCACTGGG...GGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGTG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | CACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCAGCAGTCAGAGACGGTaGGGTTGCAGAAGAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HKASSGMAPKASSVAVDPSSQRR*GCRRGH Trigger: GTGACCTCTTCTGCAACCGCACCGTCTCTGACTGCT...GGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCAAGGATGGGCGGATTGTaGCCAGGCGGTAGCGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: FPNRALPSSGCDIWGLPPRMGGL*PGGSEC Trigger: GCATTCGCTACCGCCTGGGCACAATCCGCCCATCCT...TGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | CCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCAGCCGAAAGCCCAGGAACCTaGACAATTGCCCTGGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PNRALPSSGCDIWGLPPAESPGT*TIALVQ Trigger: TTGGACCAGGGCAATTGTGCAGGTTCCTGGGCTTTC...GGCTGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | CCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCAGCCATCAGATGCGACAGCTaGTGTGGAGAAAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PNRALPSSGCDIWGLPPAIRCDS*CGESPG Trigger: TCCTGGGCTTTCTCCACAGCAGCTGTCGCATCTGAT...GGCTGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGTTTCCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCCACCTCGGCAGCCCTaGTGGTGGTGGGTATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CSFQTGPFPVPAVISGGFPPRQP*WWWVSQ Trigger: CTGTGATACCCACCACCAGCAGGGCTGCCGAGGTGG...GAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGGAAACTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | TATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTGGGATTCTGCCACCTCGGCAGCCCTaGTGGTGGTGGGTATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: YLGASASLVHLCLLGGILPPRQP*WWWVSQ Trigger: CTGTGATACCCACCACCAGCAGGGCTGCCGAGGTGG...CAGAATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAACAGGGCCCTTGCCTCCAGGGCAGCCTaGCCAGCCAGCAGCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DQGPGICLYSLQFPNRALASRAA*PASSSK Trigger: CTTGCTGCTGCTGGCTGGCCAGGCTGCCCTGGAGGC...AAGGGCCCTGTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCTTGTCACACAGGTCCCTGCGTCCTGGAAATTAGGCTGGGACCTGGGATGGGTCACAGTAACAGGTaGCTCCCAGGTAGGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EACHTGPCVLEIRLGPGMGHSNR*LPGRAG Trigger: CCCTGCCCTACCTGGGAGCCACCTGTTACTGTGACC...CATCCCAGGTCCCAGCCTAATTTCCAGGACGCAGGGACCTGTGTGACAAGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGCCTGGCTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCACCCCAGAAGGCACTGTaGTTCCCAGCCTGCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGLADQGPGICLYSLQFPPQKAL*FPACHP Trigger: CGGGTGGCAGGCTGGGAACCACAGTGCCTTCTGGGG...TGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAGCCAGGCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 |
||
| CDS-3UTR CCA 90 bp | CACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCTGGTCCAATGGCTCGTaGATCAGGTTGGGCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HKASSGMAPKASSVAVDPWSNGS*IRLGHF Trigger: GAAGTGGCCCAACCTGATCCACGAGCCATTGGACCA...GGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GCACCACTGAGGCACAGGGTTAGGAGGCTTGTCACACAGGTCCCTGCGTCCTGGATGCGACAGCTGCTGTaGAGAAAGCCCAGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: APLRHRVRRLVTQVPASWMRQLL*RKPRNL Trigger: CAGGTTCCTGGGCTTTCTCCACAGCAGCTGTCGCAT...CCAGGACGCAGGGACCTGTGTGACAAGCCTCCTAACCCTGTGCCTCAGTGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR CCA 90 bp | TCTTTGTCTCCTAGGTGGGATTCTGCCTTAGCGCGCACGCGCGGATCTGAGTCTCGGCAGCCCTGCTGGTaGTGGGTATCACAGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSPRWDSALARTRGSESRQPCW*WVSQDS Trigger: GCTGTCCTGTGATACCCACCACCAGCAGGGCTGCCG...AGACTCAGATCCGCGCGTGCGCGCTAAGGCAGAATCCCACCTAGGAGACAAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGCTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAACGCTTGCCCCGCCCCATaGCGCGGCTGTGCATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: GLADQGPGICLYSLQFPNACPAP*RGCASY Trigger: GTATGATGCACAGCCGCGCCATGGGGCGGGGCAAGC...GTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAGCCAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GAACAGAGAGGAAAAGAGAGAGCCAACTGGGGCGATCATGGGAAGCAGTCCTTTTGGGGCAGCGGGAAGTaGCTTGGCGCTTGCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EQRGKERANWGDHGKQSFWGSGK*LGACPA Trigger: GGCGGGGCAAGCGCCAAGCCACTTCCCGCTGCCCCA...AAAGGACTGCTTCCCATGATCGCCCCAGTTGGCTCTCTCTTTTCCTCTCTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| 3UTR CAA 72 bp | GTGATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTaGTCTCCTAGGTGGGATTCTGCCTTAGCGCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: VISGGFRQPGAS*SPRWDSALART Trigger: CGTGCGCGCTAAGGCAGAATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATATCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | GGTTGGGGTGTCTTAGCTCCTGTGGTCTTGGCCTGGCTGACCAGGGACCTGGAACCTCGTGTACTTCCATaGGTGCTTGAACAGGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GWGVLAPVVLAWLTRDLEPRVLP*VLEQGR Trigger: ACGGCCCTGTTCAAGCACTCATGGAAGTACACGAGG...TTCCAGGTCCCTGGTCAGCCAGGCCAAGACCACAGGAGCTAAGACACCCCAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | CACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCGTGATCTTGACTGAGTaGGTCCCATGTCTGCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HKASSGMAPKASSVAVDPVILTE*VPCLRY Trigger: GTACCGCAGACATGGGACTCACTCAGTCAAGATCAC...GGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | CACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCCGACAGCACATGTCCTaGTCTTGGCAGTATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HKASSGMAPKASSVAVDPRQHMS*SWQYLP Trigger: TGGCAGATACTGCCAAGAGCAGGACATGTGCTGTCG...GGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCACCCACACCTGGTGGCCACAGTTAATGGCCTTGATTGCTAGGTCCCTGTGGTCGCACTCCCAATaGCCTCCCTCATGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CGTHTWWPQLMALIARSLWSHSQ*PPSWQV Trigger: CACCTGCCATGAGGGAGGGCATTGGGAGTGCGACCA...CAGGGACCTAGCAATCAAGGCCATTAACTGTGGCCACCAGGTGTGGGTGCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR GCA 90 bp | TGCAGTTTCCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCCAGGCGGTAGCGAATaGCCTCATCCAGGGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: CSFQTGPFPVPAVISGGFPGGSE*PHPGSC Trigger: GCATGACCCTGGATGAGGGCATTCGCTACCGCCTGG...GAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGGAAACTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | ATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTGGGATTCTCCACCTCGGCAGCCCTaGTGGTGGTGGGTATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ISGGFRQPGASLSPRWDSPPRQP*WWWVSQ Trigger: CTGTGATACCCACCACCAGCAGGGCTGCCGAGGTGG...AGAATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTGCTCGTGGATCAGGTTaGGCCACTTCTCTGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFPVPAVISGGFRQPGASARGSG*ATSLKL Trigger: AAGCTTCAGAGAAGTGGCCCAACCTGATCCACGAGC...AGATGCACCAGGCTGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCACCCACACCTGGTGGCCACAGTTAATGGCCTTGATTGCTAGGTCCCTGCAGCCCTGCTGGTGGTaGGTATCACAGGACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CGTHTWWPQLMALIARSLQPCWW*VSQDSR Trigger: CCTGCTGTCCTGTGATACCCACCACCAGCAGGGCTG...CAGGGACCTAGCAATCAAGGCCATTAACTGTGGCCACCAGGTGTGGGTGCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR CCA 90 bp | TTGTCTCCTAGGTGGGATTCTGCCTTAGCGCGCACGCGCGGATCTGAGTCTGTACAGCCCTGCTGGTGGTaGGTATCACAGGACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPRWDSALARTRGSESVQPCWW*VSQDSR Trigger: CCTGCTGTCCTGTGATACCCACCACCAGCAGGGCTG...TACAGACTCAGATCCGCGCGTGCGCGCTAAGGCAGAATCCCACCTAGGAGACAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | CTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAACAGGGCCCCGGCAGCCCTGCTGGTaGTGGGTATCACAGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTRDLESVYTPCSFQTGPRQPCW*WVSQDS Trigger: GCTGTCCTGTGATACCCACCACCAGCAGGGCTGCCG...GGGCCCTGTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCATCATACAACGAGGAGTaGGGCTGGCCTCGTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRLHRAWPPRPLLWLWIPSYNEE*GWPRSA Trigger: AGCAGAACGAGGCCAGCCCCACTCCTCGTTGTATGA...TGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGCCTGGCTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCACCTTTCACCCCACCATaGGCCCCACGAGTTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLADQGPGICLYSLQFPPFTPP*APRVGS Trigger: GCTGCCAACTCGTGGGGCCCATGGTGGGGTGAAAGG...TGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAGCCAGGCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GTGATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTGGGATCGCACGATCCGGAAGTaGCCCCTTTCACCCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: VISGGFRQPGASLSPRWDRTIRK*PLSPHH Trigger: ATGGTGGGGTGAAAGGGGCCACTTCCGGATCGTGCG...ATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATATCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | CTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCCATTAGCTCCTTCATaGTCTCCTTCTCATCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHRAWPPRPLLWLWIPPRPLAPS*SPSHQS Trigger: GCTCTGATGAGAAGGAGATCATGAAGGAGCTAATGG...GCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | GGTAGGAGGGTGATGAGGTTGGGGTGTCTTAGCTCCTGTGGTCTTGGCCTGGCTCCTCGTGTACTTCCATaGGTGCTTGAACAGGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GRRVMRLGCLSSCGLGLAPRVLP*VLEQGR Trigger: ACGGCCCTGTTCAAGCACTCATGGAAGTACACGAGG...AGCCAGGCCAAGACCACAGGAGCTAAGACACCCCAACCTCATCACCCTCCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCGTGATCTTGACTGAGTaGGTCCCATGTCTGCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PSSGCDIWGLPPAWCIFVVILTE*VPCLRY Trigger: GTACCGCAGACATGGGACTCACTCAGTCAAGATCAC...GACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGGTGTCTTAGCTCCTGTGGTCTTGGCCTGGCTGACCAGGGACCTGGAATCCCCAGTGATCTTGACTaGGTGAGTCCCATGTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LGCLSSCGLGLADQGPGIPSDLD*VSPMSA Trigger: CGCAGACATGGGACTCACTCAGTCAAGATCACTGGG...GATTCCAGGTCCCTGGTCAGCCAGGCCAAGACCACAGGAGCTAAGACACCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCACACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGCGACAGCACATGTCCTaGTCTTGGCAGTATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SAHKASSGMAPKASSVAVRQHMS*SWQYLP Trigger: TGGCAGATACTGCCAAGAGCAGGACATGTGCTGTCG...CACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGTGTGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACAGAGACGGTGCGGTTaGAGAAGAGGTCACAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TRLHRAWPPRPLLWLWIPQRRCG*RRGHSN Trigger: GTTACTGTGACCTCTTCTGCAACCGCACCGTCTCTG...TGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGCCTGGCTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCATGGTCGCACTCCCAATaGCCTCCCTCATGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLADQGPGICLYSLQFPWSHSQ*PPSWQV Trigger: CACCTGCCATGAGGGAGGGCATTGGGAGTGCGACCA...TGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAGCCAGGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 |
||
| CDS-3UTR GCA 90 bp | TATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTGGGATTCTGCCTCATCCAGGGTCATaGCCCAGAAGGCACTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YLGASASLVHLCLLGGILPHPGS*PRRHCG Trigger: ACCACAGTGCCTTCTGGGGCATGACCCTGGATGAGG...CAGAATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGCCTGGCTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCACCAGGCGGTAGCGAATaGCCTCATCCAGGGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLADQGPGICLYSLQFPPGGSE*PHPGSC Trigger: GCATGACCCTGGATGAGGGCATTCGCTACCGCCTGG...TGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAGCCAGGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | CTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAACAGGGCCCAGGATGGGCGGATTGTaGCCAGGCGGTAGCGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LTRDLESVYTPCSFQTGPRMGGL*PGGSEC Trigger: GCATTCGCTACCGCCTGGGCACAATCCGCCCATCCT...GGGCCCTGTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGGTGTCTTAGCTCCTGTGGTCTTGGCCTGGCTGACCAGGGACCTGGAAGAAAGCCCAGGAACCTaGACAATTGCCCTGGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GWGVLAPVVLAWLTRDLEESPGT*TIALVQ Trigger: TTGGACCAGGGCAATTGTGCAGGTTCCTGGGCTTTC...TTCCAGGTCCCTGGTCAGCCAGGCCAAGACCACAGGAGCTAAGACACCCCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGGTGTCTTAGCTCCTGTGGTCTTGGCCTGGCTGACCAGGGACCTGGAATCCCTGCACAATTGCCCTaGTCCAATGGCTCGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LGCLSSCGLGLADQGPGIPAQLP*SNGSWI Trigger: GATCCACGAGCCATTGGACCAGGGCAATTGTGCAGG...GATTCCAGGTCCCTGGTCAGCCAGGCCAAGACCACAGGAGCTAAGACACCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGGTGTCTTAGCTCCTGTGGTCTTGGCCTGGCTGACCAGGGACCTGGAATCATGCGACAGCTGCTGTaGAGAAAGCCCAGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGCLSSCGLGLADQGPGIMRQLL*RKPRNL Trigger: CAGGTTCCTGGGCTTTCTCCACAGCAGCTGTCGCAT...GATTCCAGGTCCCTGGTCAGCCAGGCCAAGACCACAGGAGCTAAGACACCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGGAGGGTGATGAGGTTGGGGTGTCTTAGCTCCTGTGGTCTTGGCCTGGCTTCATACAACGAGGAGTaGGGCTGGCCTCGTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRRVMRLGCLSSCGLGLASYNEE*GWPRSA Trigger: AGCAGAACGAGGCCAGCCCCACTCCTCGTTGTATGA...AGCCAGGCCAAGACCACAGGAGCTAAGACACCCCAACCTCATCACCCTCCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCATCATACAACGAGGAGTaGGGCTGGCCTCGTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPNRALPSSGCDIWGLPPSYNEE*GWPRSA Trigger: AGCAGAACGAGGCCAGCCCCACTCCTCGTTGTATGA...TGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | TGTCACACAGGTCCCTGCGTCCTGGAAATTAGGCTGGGACCTGGGATGGGAGAACCTCGTGTACTTCCATaGGTGCTTGAACAGGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CHTGPCVLEIRLGPGMGEPRVLP*VLEQGR Trigger: ACGGCCCTGTTCAAGCACTCATGGAAGTACACGAGG...TTCTCCCATCCCAGGTCCCAGCCTAATTTCCAGGACGCAGGGACCTGTGTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR TCA 90 bp | TATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTGGGATTCTGCCCAGTGATCTTGACTaGGTGAGTCCCATGTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: YLGASASLVHLCLLGGILPSDLD*VSPMSA Trigger: CGCAGACATGGGACTCACTCAGTCAAGATCACTGGG...CAGAATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | GTGATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTGGGATCCCAGTGATCTTGACTaGGTGAGTCCCATGTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: VISGGFRQPGASLSPRWDPSDLD*VSPMSA Trigger: CGCAGACATGGGACTCACTCAGTCAAGATCACTGGG...ATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATATCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCTAGGTGGGATTCTGCCTTAGCGCGCACGCGCGGATCTGAGTCTGTAGAGCAGAGACGGTGCGGTTaGAGAAGAGGTCACAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPRWDSALARTRGSESVEQRRCG*RRGHSN Trigger: GTTACTGTGACCTCTTCTGCAACCGCACCGTCTCTG...CTCTACAGACTCAGATCCGCGCGTGCGCGCTAAGGCAGAATCCCACCTAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | TTGTCTCCTAGGTGGGATTCTGCCTTAGCGCGCACGCGCGGATCTGAGTCTGTAAGCAGTCAGAGACGGTaGGGTTGCAGAAGAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSPRWDSALARTRGSESVSSQRR*GCRRGH Trigger: GTGACCTCTTCTGCAACCGCACCGTCTCTGACTGCT...TACAGACTCAGATCCGCGCGTGCGCGCTAAGGCAGAATCCCACCTAGGAGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGGCCACAGTTAATGGCCTTGATTGCTAGGTCCCTGGGAAGATCTTATCAGTCCGGCCCCCATGCATaGACCCTTGGACGGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WWPQLMALIARSLGRSYQSGPHA*TLGREG Trigger: TCCCTCCCGTCCAAGGGTGCATGCATGGGGGCCGGA...CTGATAAGATCTTCCCAGGGACCTAGCAATCAAGGCCATTAACTGTGGCCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCTAGGTGGGATTCTGCCTTAGCGCGCACGCGCGGATCTGAGTCTGTAGAGATCAGATGCGACAGCTaGTGTGGAGAAAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPRWDSALARTRGSESVEIRCDS*CGESPG Trigger: TCCTGGGCTTTCTCCACAGCAGCTGTCGCATCTGAT...CTCTACAGACTCAGATCCGCGCGTGCGCGCTAAGGCAGAATCCCACCTAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGGTGTCTTAGCTCCTGTGGTCTTGGCCTGGCTGACCAGGGACCTGGAATCCAGGACAGCAGGTTTTaGGGTGATAGGATGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGCLSSCGLGLADQGPGIQDSRF*GDRMGV Trigger: GACACCCATCCTATCACCGCAAAACCTGCTGTCCTG...GATTCCAGGTCCCTGGTCAGCCAGGCCAAGACCACAGGAGCTAAGACACCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGTTTCCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCTGGTCCAATGGCTCGTaGATCAGGTTGGGCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSFQTGPFPVPAVISGGFWSNGS*IRLGHF Trigger: GAAGTGGCCCAACCTGATCCACGAGCCATTGGACCA...GAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGGAAACTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTGGGATTCTGTGGTCCAATGGCTCGTaGATCAGGTTGGGCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YLGASASLVHLCLLGGILWSNGS*IRLGHF Trigger: GAAGTGGCCCAACCTGATCCACGAGCCATTGGACCA...CAGAATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TCATGGGAAGCAGTCCTTTTATGTGGCACCCACACCTGGTGGCCACAGTTAATGCGGCAGCCCTGCTGGTaGTGGGTATCACAGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWEAVLLCGTHTWWPQLMRQPCW*WVSQDS Trigger: GCTGTCCTGTGATACCCACCACCAGCAGGGCTGCCG...CATTAACTGTGGCCACCAGGTGTGGGTGCCACATAAAAGGACTGCTTCCCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR CCA 90 bp | TGCAGTTTCCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCTCATACAACGAGGAGTaGGGCTGGCCTCGTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSFQTGPFPVPAVISGGFSYNEE*GWPRSA Trigger: AGCAGAACGAGGCCAGCCCCACTCCTCGTTGTATGA...GAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGGAAACTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GAACAGAGAGGAAAAGAGAGAGCCAACTGGGGCGATCATGGGAAGCAGTCCTTTCCTTTCACCCCACCATaGGCCCCACGAGTTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQRGKERANWGDHGKQSFPFTPP*APRVGS Trigger: GCTGCCAACTCGTGGGGCCCATGGTGGGGTGAAAGG...AAAGGACTGCTTCCCATGATCGCCCCAGTTGGCTCTCTCTTTTCCTCTCTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCCCATTAGCTCCTTCATaGTCTCCTTCTCATCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSSGCDIWGLPPAWCIFVPLAPS*SPSHQS Trigger: GCTCTGATGAGAAGGAGATCATGAAGGAGCTAATGG...GACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTGGCTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAACCCTCGTGTACTTCCATaGGTGCTTGAACAGGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GLADQGPGICLYSLQFPNPRVLP*VLEQGR Trigger: ACGGCCCTGTTCAAGCACTCATGGAAGTACACGAGG...GTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAGCCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGTTTCCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCGAAAGCCCAGGAACCTaGACAATTGCCCTGGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSFQTGPFPVPAVISGGFESPGT*TIALVQ Trigger: TTGGACCAGGGCAATTGTGCAGGTTCCTGGGCTTTC...GAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGGAAACTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | TGTCACACAGGTCCCTGCGTCCTGGAAATTAGGCTGGGACCTGGGATGGGAGAACAGGACAGCAGGTTTTaGGGTGATAGGATGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CHTGPCVLEIRLGPGMGEQDSRF*GDRMGV Trigger: GACACCCATCCTATCACCGCAAAACCTGCTGTCCTG...TTCTCCCATCCCAGGTCCCAGCCTAATTTCCAGGACGCAGGGACCTGTGTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR GCA 90 bp | TGGTGGCCACAGTTAATGGCCTTGATTGCTAGGTCCCTGGGAAGATCTTATCAGCCACCTCGGCAGCCCTaGTGGTGGTGGGTATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WWPQLMALIARSLGRSYQPPRQP*WWWVSQ Trigger: CTGTGATACCCACCACCAGCAGGGCTGCCGAGGTGG...CTGATAAGATCTTCCCAGGGACCTAGCAATCAAGGCCATTAACTGTGGCCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR CCA 90 bp | TATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTGGGATTCTGGCTCGTGGATCAGGTTaGGCCACTTCTCTGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YLGASASLVHLCLLGGILARGSG*ATSLKL Trigger: AAGCTTCAGAGAAGTGGCCCAACCTGATCCACGAGC...CAGAATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | ATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTGGGATTCTCCTGCACAATTGCCCTaGTCCAATGGCTCGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ISGGFRQPGASLSPRWDSPAQLP*SNGSWI Trigger: GATCCACGAGCCATTGGACCAGGGCAATTGTGCAGG...AGAATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | CTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAACAGGGCCCATGCGACAGCTGCTGTaGAGAAAGCCCAGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTRDLESVYTPCSFQTGPMRQLL*RKPRNL Trigger: CAGGTTCCTGGGCTTTCTCCACAGCAGCTGTCGCAT...GGGCCCTGTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGCCTGGCTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAGTGATCTTGACTGAGTaGGTCCCATGTCTGCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LGLADQGPGICLYSLQFPVILTE*VPCLRY Trigger: GTACCGCAGACATGGGACTCACTCAGTCAAGATCAC...TGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAGCCAGGCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGCCTGGCTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCACGACAGCACATGTCCTaGTCTTGGCAGTATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGLADQGPGICLYSLQFPRQHMS*SWQYLP Trigger: TGGCAGATACTGCCAAGAGCAGGACATGTGCTGTCG...TGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAGCCAGGCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGCCTGGCTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCACAGAGACGGTGCGGTTaGAGAAGAGGTCACAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGLADQGPGICLYSLQFPQRRCG*RRGHSN Trigger: GTTACTGTGACCTCTTCTGCAACCGCACCGTCTCTG...TGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAGCCAGGCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAGCAGAGAGGGCTCCTGAGGCTGTCATATTCTGACAGGTTTCACGTAGCCATCAGATGCGACAGCTaGTGTGGAGAAAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EEQRGLLRLSYSDRFHVAIRCDS*CGESPG Trigger: TCCTGGGCTTTCTCCACAGCAGCTGTCGCATCTGAT...GGCTACGTGAAACCTGTCAGAATATGACAGCCTCAGGAGCCCTCTCTGCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGCTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAACCAGGACAGCAGGTTTTaGGGTGATAGGATGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLADQGPGICLYSLQFPNQDSRF*GDRMGV Trigger: GACACCCATCCTATCACCGCAAAACCTGCTGTCCTG...GTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAGCCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAACAGGGCCCTTCCTGCACAATTGCCCTaGTCCAATGGCTCGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: DQGPGICLYSLQFPNRALPAQLP*SNGSWI Trigger: GATCCACGAGCCATTGGACCAGGGCAATTGTGCAGG...AAGGGCCCTGTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAACAGGGCCCTTATGCGACAGCTGCTGTaGAGAAAGCCCAGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: DQGPGICLYSLQFPNRALMRQLL*RKPRNL Trigger: CAGGTTCCTGGGCTTTCTCCACAGCAGCTGTCGCAT...AAGGGCCCTGTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGTCACACAGGTCCCTGCGTCCTGGAAATTAGGCTGGGACCTGGGATGGGATTTGCGGTGATAGGATaGGTGTCATGTGTCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ACHTGPCVLEIRLGPGMGFAVIG*VSCVPK Trigger: CTTTGGGACACATGACACCCATCCTATCACCGCAAA...TCCCATCCCAGGTCCCAGCCTAATTTCCAGGACGCAGGGACCTGTGTGACAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCATTTGCGGTGATAGGATaGGTGTCATGTGTCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FPNRALPSSGCDIWGLPPFAVIG*VSCVPK Trigger: CTTTGGGACACATGACACCCATCCTATCACCGCAAA...TGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCTAGGGAGATGGACAGAATTCATCAAAAAGAAGATGAGAGAGAGGGTGGCTTGCCCCGCCCCATaGCGCGGCTGTGCATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: WRLGRWTEFIKKKMRERVACPAP*RGCASY Trigger: GTATGATGCACAGCCGCGCCATGGGGCGGGGCAAGC...CACCCTCTCTCTCATCTTCTTTTTGATGAATTCTGTCCATCTCCCTAGCCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | TGCAGTTTCCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCTCTCATTCATATTCATaGCAGTGGAGGATGGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CSFQTGPFPVPAVISGGFSHSYS*QWRMGG Trigger: TCCGCCCATCCTCCACTGTCATGAATATGAATGAGA...GAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGGAAACTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | GTGATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTGGGATTCTCATTCATATTCATaGCAGTGGAGGATGGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VISGGFRQPGASLSPRWDSHSYS*QWRMGG Trigger: TCCGCCCATCCTCCACTGTCATGAATATGAATGAGA...ATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | TGTCACACAGGTCCCTGCGTCCTGGAAATTAGGCTGGGACCTGGGATGGGAGAACCATTAGCTCCTTCATaGTCTCCTTCTCATCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CHTGPCVLEIRLGPGMGEPLAPS*SPSHQS Trigger: GCTCTGATGAGAAGGAGATCATGAAGGAGCTAATGG...TTCTCCCATCCCAGGTCCCAGCCTAATTTCCAGGACGCAGGGACCTGTGTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR GCA 90 bp | GACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAACAGGGCCCTTCGACAGCACATGTCCTaGTCTTGGCAGTATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DQGPGICLYSLQFPNRALRQHMS*SWQYLP Trigger: TGGCAGATACTGCCAAGAGCAGGACATGTGCTGTCG...AAGGGCCCTGTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | TCATGGGAAGCAGTCCTTTTATGTGGCACCCACACCTGGTGGCCACAGTTAATGAGCAGTCAGAGACGGTaGGGTTGCAGAAGAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SWEAVLLCGTHTWWPQLMSSQRR*GCRRGH Trigger: GTGACCTCTTCTGCAACCGCACCGTCTCTGACTGCT...CATTAACTGTGGCCACCAGGTGTGGGTGCCACATAAAAGGACTGCTTCCCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR GCA 90 bp | TTGGCCTGGCTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAATCAGATGCGACAGCTaGTGTGGAGAAAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAWLTRDLESVYTPCSFQIRCDS*CGESPG Trigger: TCCTGGGCTTTCTCCACAGCAGCTGTCGCATCTGAT...TTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAGCCAGGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | GACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAACAGGGCCCTTCAGGACAGCAGGTTTTaGGGTGATAGGATGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DQGPGICLYSLQFPNRALQDSRF*GDRMGV Trigger: GACACCCATCCTATCACCGCAAAACCTGCTGTCCTG...AAGGGCCCTGTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | GAACAGAGAGGAAAAGAGAGAGCCAACTGGGGCGATCATGGGAAGCAGTCCTTTCCTGCACAATTGCCCTaGTCCAATGGCTCGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: EQRGKERANWGDHGKQSFPAQLP*SNGSWI Trigger: GATCCACGAGCCATTGGACCAGGGCAATTGTGCAGG...AAAGGACTGCTTCCCATGATCGCCCCAGTTGGCTCTCTCTTTTCCTCTCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR CCA 90 bp | GTGATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTTGTCTCCTAGGTGGGATTTTGCGGTGATAGGATaGGTGTCATGTGTCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VISGGFRQPGASLSPRWDFAVIG*VSCVPK Trigger: CTTTGGGACACATGACACCCATCCTATCACCGCAAA...ATCCCACCTAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | GAGGAGCAGAGAGGGCTCCTGAGGCTGTCATATTCTGACAGGTTTCACGTAGCCTCTCATTCATATTCATaGCAGTGGAGGATGGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: EEQRGLLRLSYSDRFHVASHSYS*QWRMGG Trigger: TCCGCCCATCCTCCACTGTCATGAATATGAATGAGA...GGCTACGTGAAACCTGTCAGAATATGACAGCCTCAGGAGCCCTCTCTGCTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGCCTGGCTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCACCATTAGCTCCTTCATaGTCTCCTTCTCATCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLADQGPGICLYSLQFPPLAPS*SPSHQS Trigger: GCTCTGATGAGAAGGAGATCATGAAGGAGCTAATGG...TGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAGCCAGGCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR GCA 90 bp | GAACAGAGAGGAAAAGAGAGAGCCAACTGGGGCGATCATGGGAAGCAGTCCTTTGAAAGCCCAGGAACCTaGACAATTGCCCTGGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EQRGKERANWGDHGKQSFESPGT*TIALVQ Trigger: TTGGACCAGGGCAATTGTGCAGGTTCCTGGGCTTTC...AAAGGACTGCTTCCCATGATCGCCCCAGTTGGCTCTCTCTTTTCCTCTCTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR CCA 90 bp | GAACAGAGAGGAAAAGAGAGAGCCAACTGGGGCGATCATGGGAAGCAGTCCTTTGCTCGTGGATCAGGTTaGGCCACTTCTCTGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EQRGKERANWGDHGKQSFARGSG*ATSLKL Trigger: AAGCTTCAGAGAAGTGGCCCAACCTGATCCACGAGC...AAAGGACTGCTTCCCATGATCGCCCCAGTTGGCTCTCTCTTTTCCTCTCTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCTAGGGAGATGGACAGAATTCATCAAAAAGAAGATGAGAGAGAGGGTGCGATGTCGCACTCGTTaGTGCCACGCACGATCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WRLGRWTEFIKKKMRERVRCRTR*CHARSG Trigger: TCCGGATCGTGCGTGGCACCAACGAGTGCGACATCG...CACCCTCTCTCTCATCTTCTTTTTGATGAATTCTGTCCATCTCCCTAGCCTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCTAGGGAGATGGACAGAATTCATCAAAAAGAAGATGAGAGAGAGGGTGCCCCAGAAGGCACTGTaGTTCCCAGCCTGCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: WRLGRWTEFIKKKMRERVPQKAL*FPACHH Trigger: ATGGTGGCAGGCTGGGAACCACAGTGCCTTCTGGGG...CACCCTCTCTCTCATCTTCTTTTTGATGAATTCTGTCCATCTCCCTAGCCTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGGCCACAGTTAATGGCCTTGATTGCTAGGTCCCTGGGAAGATCTTATCAGGTGATCTTGACTGAGTaGGTCCCATGTCTGCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WWPQLMALIARSLGRSYQVILTE*VPCLRY Trigger: GTACCGCAGACATGGGACTCACTCAGTCAAGATCAC...CTGATAAGATCTTCCCAGGGACCTAGCAATCAAGGCCATTAACTGTGGCCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR CCA 90 bp | GACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAACAGGGCCCTTTTTGCGGTGATAGGATaGGTGTCATGTGTCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DQGPGICLYSLQFPNRALFAVIG*VSCVPK Trigger: CTTTGGGACACATGACACCCATCCTATCACCGCAAA...AAGGGCCCTGTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| 3UTR CAA 72 bp | TGTGGCACCCACACCTGGTGGCCACAGTTAATGGCCTaGATTGCTAGGTCCCTGGGAAGATCTTATCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CGTHTWWPQLMA*IARSLGRSYQN Trigger: ATTCTGATAAGATCTTCCCAGGGACCTAGCAATCAAGGCCATTAACTGTGGCCACCAGGTGTGGGTGCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGGCTAGGGAGATGGACAGAATTCATCAAAAAGAAGATGAGAGAGAGGGTGAGCAGTCAGAGACGGTaGGGTTGCAGAAGAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WRLGRWTEFIKKKMRERVSSQRR*GCRRGH Trigger: GTGACCTCTTCTGCAACCGCACCGTCTCTGACTGCT...CACCCTCTCTCTCATCTTCTTTTTGATGAATTCTGTCCATCTCCCTAGCCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCTAGGGAGATGGACAGAATTCATCAAAAAGAAGATGAGAGAGAGGGTGGCTCGTGGATCAGGTTaGGCCACTTCTCTGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WRLGRWTEFIKKKMRERVARGSG*ATSLKL Trigger: AAGCTTCAGAGAAGTGGCCCAACCTGATCCACGAGC...CACCCTCTCTCTCATCTTCTTTTTGATGAATTCTGTCCATCTCCCTAGCCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGGCTAGGGAGATGGACAGAATTCATCAAAAAGAAGATGAGAGAGAGGGTGTCTCATTCATATTCATaGCAGTGGAGGATGGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WRLGRWTEFIKKKMRERVSHSYS*QWRMGG Trigger: TCCGCCCATCCTCCACTGTCATGAATATGAATGAGA...CACCCTCTCTCTCATCTTCTTTTTGATGAATTCTGTCCATCTCCCTAGCCTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS GCA 90 bp | TGCTCTTGGCAGTATCTGCCACCGGCGTCCCGGATGCCCCGCAGGTaGAGCCCTGGCGCCAGCTCCCTGCGCCAACGACTCCGCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CSWQYLPPASRMPRR*SPGASSLRQRLRRA Trigger: GGCCCGGCGGAGTCGTTGGCGCAGGGAGCTGGCGCCAGGGCTGCACCTGCGGGGCATCCGGGACGCCGGTGGCAGATACTGCCAAGAGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 ENSMUST00000175992.8 |
||
| CDS CCA 90 bp | GCCAGCTCCCTGCGCCAACGACTCCGCCGGGCCTCCAGGGCAGCCTaGCCAGCCAGCAGCAGCAAGAGCAGCCCCAGCCAACATCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ASSLRQRLRRASRAA*PASSSKSSPSQHPH Trigger: GTGGGGATGTTGGCTGGGGCTGCTCTTGCTGCTGCTGGCTGGCCAGGCTGCCCTGGAGGCCCGGCGGAGTCGTTGGCGCAGGGAGCTGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 ENSMUST00000175992.8 |
||
| CDS GCA 90 bp | AGCACATGTCCTGCTCTTGGCAGTATCTGCCACCGGCGTCCCGGATaGCCCGCAGGTGCAGCCCTGGCGCCAGCTCCCTGCGCCAACGAC | + |
|
Preference number: 5 (lower is better) Translates to: STCPALGSICHRRPG*PAGAALAPAPCAND Trigger: GTCGTTGGCGCAGGGAGCTGGCGCCAGGGCTGCACCTGCGGGGCATCCGGGACGCCGGTGGCAGATACTGCCAAGAGCAGGACATGTGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 ENSMUST00000175992.8 |
||
| CDS CCA 90 bp | AGGGCACACTCGTCAGCACGGCCTCGACAGCACATGTCCTGCTCTTaGCAGTATCTGCCACCGGCGTCCCGGATGCCCCGCAGGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAHSSARPRQHMSCS*QYLPPASRMPRRCS Trigger: GCTGCACCTGCGGGGCATCCGGGACGCCGGTGGCAGATACTGCCAAGAGCAGGACATGTGCTGTCGAGGCCGTGCTGACGAGTGTGCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 ENSMUST00000175992.8 |
||
| CDS-3UTR CAA 90 bp | CGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCACCTCGCCTAGTGTCGATGTCGCACTCGTaGGTGCCACGCACGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RAWPPRPLLWLWIPPRLVSMSHS*VPRTIR Trigger: CCGGATCGTGCGTGGCACCAACGAGTGCGACATCGA...CACTAGGCGAGGTGGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS GCA 90 bp | GGCGGATTGTGCCCAGGCGGTAGCGAATGCCCTCATCCAGGGTCATaGCCCAGAAGGCACTGTGGTTCCCAGCCTGCCACCCGTAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGLCPGGSECPHPGS*PRRHCGSQPATRSC Trigger: GCAACTACGGGTGGCAGGCTGGGAACCACAGTGCCTTCTGGGGCATGACCCTGGATGAGGGCATTCGCTACCGCCTGGGCACAATCCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 |
||
| CDS CCA 90 bp | ACAACGAGGAGTGGGGCTGGCCTCGTTCTGCTCACGGCCGGAGAATaGGTAACAGTTGTCAGACACCACCCCGCGGCGCCGCAGGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: TTRSGAGLVLLTAGE*VTVVRHHPAAPQEP Trigger: TGGTTCCTGCGGCGCCGCGGGGTGGTGTCTGACAACTGTTACCCATTCTCCGGCCGTGAGCAGAACGAGGCCAGCCCCACTCCTCGTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS CCA 90 bp | GCTTGCCCCGCCCCATGGCGCGGCTGTGCATCATACAACGAGGAGTaGGGCTGGCCTCGTTCTGCTCACGGCCGGAGAATGGGTAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: ACPAPWRGCASYNEE*GWPRSAHGRRMGNS Trigger: ACTGTTACCCATTCTCCGGCCGTGAGCAGAACGAGGCCAGCCCCACTCCTCGTTGTATGATGCACAGCCGCGCCATGGGGCGGGGCAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS GCA 90 bp | TGGAATCAACCTGACCATTGGGGCAGCGGGAAGTGGCTTGGCGCTTaGCCCGCCCCATGGCGCGGCTGTGCATCATACAACGAGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WNQPDHWGSGKWLGA*PAPWRGCASYNEEW Trigger: CCACTCCTCGTTGTATGATGCACAGCCGCGCCATGGGGCGGGGCAAGCGCCAAGCCACTTCCCGCTGCCCCAATGGTCAGGTTGATTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS GCA 90 bp | GGCGGATTGTGCCCAGGCGGTAGCGAATGCCCTCATCCAGGGTCATaGCCCAGAAGGCACTGTGGTTCCCAGCCTGCCACCATCGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGLCPGGSECPHPGS*PRRHCGSQPATIDC Trigger: GCAATCGATGGTGGCAGGCTGGGAACCACAGTGCCTTCTGGGGCATGACCCTGGATGAGGGCATTCGCTACCGCCTGGGCACAATCCGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175992.8 |
||
| CDS CCA 90 bp | CCCGCCCCATGGCGCGGCTGTGCATCATACAACGAGGAGTGGGGCTaGCCTCGTTCTGCTCACGGCCGGAGAATGGGTAACAGTTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PAPWRGCASYNEEWG*PRSAHGRRMGNSCQ Trigger: CTGACAACTGTTACCCATTCTCCGGCCGTGAGCAGAACGAGGCCAGCCCCACTCCTCGTTGTATGATGCACAGCCGCGCCATGGGGCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS GCA 90 bp | CGCAGGAACCACCAAGCGCCATCAAGACGCCCACCTCGGCAGCCCTaGTGGTGGTGGGTATCACAGGACAGCAGGTTTTGCGGTGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRNHQAPSRRPPRQP*WWWVSQDSRFCGDR Trigger: CCTATCACCGCAAAACCTGCTGTCCTGTGATACCCACCACCAGCAGGGCTGCCGAGGTGGGCGTCTTGATGGCGCTTGGTGGTTCCTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCACACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGTCGATGTCGCACTCGTaGGTGCCACGCACGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SAHKASSGMAPKASSVAVSMSHS*VPRTIR Trigger: CCGGATCGTGCGTGGCACCAACGAGTGCGACATCGA...CACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGTGTGCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS GCA 90 bp | TCCCGAGGCAGAAGTCCCAGAAGTCGGGGCAGCAGTCAGAGACGGTaGGGTTGCAGAAGAGGTCACAGTAACAGGTGGCTCCCAGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRGRSPRSRGSSQRR*GCRRGHSNRWLPGR Trigger: CCTACCTGGGAGCCACCTGTTACTGTGACCTCTTCTGCAACCGCACCGTCTCTGACTGCTGCCCCGACTTCTGGGACTTCTGCCTCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 ENSMUST00000175992.8 |
||
| CDS GCA 90 bp | CCTGGTCGCACTCCCAATGCCCTCCCTCATGGCAGGTGCATCGATTaGAGTTGTCCCAGTAGGTTCCGAAGACTGGGTAGATCCGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGRTPNALPHGRCID*SCPSRFRRLGRSGP Trigger: GGGGCCGGATCTACCCAGTCTTCGGAACCTACTGGGACAACTGCAATCGATGCACCTGCCATGAGGGAGGGCATTGGGAGTGCGACCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 |
||
| CDS CCA 90 bp | CACCAAGCGCCATCAAGACGCCCACCTCGGCAGCCCTGCTGGTGGTaGGTATCACAGGACAGCAGGTTTTGCGGTGATAGGATGGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HQAPSRRPPRQPCWW*VSQDSRFCGDRMGV Trigger: GACACCCATCCTATCACCGCAAAACCTGCTGTCCTGTGATACCCACCACCAGCAGGGCTGCCGAGGTGGGCGTCTTGATGGCGCTTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR CAA 90 bp | CACAAGGCTTCATCGGGCATGGCCCCCAAGGCCTCTTCTGTGGCTGTGGATCCCCAGGAACCTGCACAATaGCCCTGGTCCAATGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HKASSGMAPKASSVAVDPQEPAQ*PWSNGS Trigger: CGAGCCATTGGACCAGGGCAATTGTGCAGGTTCCTG...GGGATCCACAGCCACAGAAGAGGCCTTGGGGGCCATGCCCGATGAAGCCTTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTCATGGGCCCCACGAGTaGGCAGCAGTCCAGTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: PFPVPAVISGGFRQPGASHGPHE*AAVQYL Trigger: TAAGTACTGGACTGCTGCCAACTCGTGGGGCCCATG...AGATGCACCAGGCTGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CAA 90 bp | GCTTGTCACACAGGTCCCTGCGTCCTGGAAATTAGGCTGGGACCTGGGATGGGATCGATGTCGCACTCGTaGGTGCCACGCACGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ACHTGPCVLEIRLGPGMGSMSHS*VPRTIR Trigger: CCGGATCGTGCGTGGCACCAACGAGTGCGACATCGA...TCCCATCCCAGGTCCCAGCCTAATTTCCAGGACGCAGGGACCTGTGTGACAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS CCA 90 bp | AACCACCAAGCGCCATCAAGACGCCCACCTCGGCAGCCCTGCTGGTaGTGGGTATCACAGGACAGCAGGTTTTGCGGTGATAGGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: NHQAPSRRPPRQPCW*WVSQDSRFCGDRMG Trigger: ACCCATCCTATCACCGCAAAACCTGCTGTCCTGTGATACCCACCACCAGCAGGGCTGCCGAGGTGGGCGTCTTGATGGCGCTTGGTGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CCA 90 bp | AGGAACCACCAAGCGCCATCAAGACGCCCACCTCGGCAGCCCTGCTaGTGGTGGGTATCACAGGACAGCAGGTTTTGCGGTGATAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RNHQAPSRRPPRQPC*WWVSQDSRFCGDRM Trigger: CATCCTATCACCGCAAAACCTGCTGTCCTGTGATACCCACCACCAGCAGGGCTGCCGAGGTGGGCGTCTTGATGGCGCTTGGTGGTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CCA 90 bp | AGCCTGCCACCATCGATTGCAGTTGTCCCAGTAGGTTCCGAAGACTaGGTAGATCCGGCCCCCATGCATGCACCCTTGGACGGGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLPPSIAVVPVGSED*VDPAPMHAPLDGRE Trigger: TTCCCTCCCGTCCAAGGGTGCATGCATGGGGGCCGGATCTACCCAGTCTTCGGAACCTACTGGGACAACTGCAATCGATGGTGGCAGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175992.8 |
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| CDS-3UTR CAA 90 bp | GGTTGGGGTGTCTTAGCTCCTGTGGTCTTGGCCTGGCTGACCAGGGACCTGGAACAGGAACCTGCACAATaGCCCTGGTCCAATGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GWGVLAPVVLAWLTRDLEQEPAQ*PWSNGS Trigger: CGAGCCATTGGACCAGGGCAATTGTGCAGGTTCCTG...TTCCAGGTCCCTGGTCAGCCAGGCCAAGACCACAGGAGCTAAGACACCCCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR CAA 90 bp | TGCAGTTTCCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCTCGATGTCGCACTCGTaGGTGCCACGCACGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CSFQTGPFPVPAVISGGFSMSHS*VPRTIR Trigger: CCGGATCGTGCGTGGCACCAACGAGTGCGACATCGA...GAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGGAAACTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS GCA 90 bp | GACACGGCTCCTGGTCGCACTCCCAATGCCCTCCCTCATGGCAGGTaGATCGATTGCAGTTGTCCCAGTAGGTTCCGAAGACTGGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: DTAPGRTPNALPHGR*IDCSCPSRFRRLGR Trigger: TCTACCCAGTCTTCGGAACCTACTGGGACAACTGCAATCGATGCACCTGCCATGAGGGAGGGCATTGGGAGTGCGACCAGGAGCCGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 |
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| CDS CCA 90 bp | ATGGCAGGTGCATCGATTGCAGTTGTCCCAGTAGGTTCCGAAGACTaGGTAGATCCGGCCCCCATGCATGCACCCTTGGACGGGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: MAGASIAVVPVGSED*VDPAPMHAPLDGRE Trigger: TTCCCTCCCGTCCAAGGGTGCATGCATGGGGGCCGGATCTACCCAGTCTTCGGAACCTACTGGGACAACTGCAATCGATGCACCTGCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 |
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| CDS-3UTR CAA 90 bp | TTTCCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCACAGGAACCTGCACAATaGCCCTGGTCCAATGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: FPNRALPSSGCDIWGLPPQEPAQ*PWSNGS Trigger: CGAGCCATTGGACCAGGGCAATTGTGCAGGTTCCTG...TGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR CAA 90 bp | TGGTGGCCACAGTTAATGGCCTTGATTGCTAGGTCCCTGGGAAGATCTTATCAGGCAGCGGGAAGTGGCTaGGCGCTTGCCCCGCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: WWPQLMALIARSLGRSYQAAGSG*ALAPPH Trigger: ATGGGGCGGGGCAAGCGCCAAGCCACTTCCCGCTGC...CTGATAAGATCTTCCCAGGGACCTAGCAATCAAGGCCATTAACTGTGGCCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS-3UTR CAA 90 bp | GCTTGTCACACAGGTCCCTGCGTCCTGGAAATTAGGCTGGGACCTGGGATGGGACATGGGCCCCACGAGTaGGCAGCAGTCCAGTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: ACHTGPCVLEIRLGPGMGHGPHE*AAVQYL Trigger: TAAGTACTGGACTGCTGCCAACTCGTGGGGCCCATG...TCCCATCCCAGGTCCCAGCCTAATTTCCAGGACGCAGGGACCTGTGTGACAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
||
| CDS GCA 90 bp | CAGATGCGACAGCTGCTGTGGAGAAAGCCCAGGAACCTGCACAATTaGCCTGGTCCAATGGCTCGTGGATCAGGTTGGGCCACTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QMRQLLWRKPRNLHN*PGPMARGSGWATSL Trigger: CAGAGAAGTGGCCCAACCTGATCCACGAGCCATTGGACCAGGGCAATTGTGCAGGTTCCTGGGCTTTCTCCACAGCAGCTGTCGCATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CCA 90 bp | GCGACAGCTGCTGTGGAGAAAGCCCAGGAACCTGCACAATTGCCCTaGTCCAATGGCTCGTGGATCAGGTTGGGCCACTTCTCTGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATAAVEKAQEPAQLP*SNGSWIRLGHFSEA Trigger: AGCTTCAGAGAAGTGGCCCAACCTGATCCACGAGCCATTGGACCAGGGCAATTGTGCAGGTTCCTGGGCTTTCTCCACAGCAGCTGTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CAA 90 bp | CCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCAGCCTACTTCCATGAGTGCTaGAACAGGGCCGTTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PNRALPSSGCDIWGLPPAYFHEC*NRAVFH Trigger: ATGGAAAACGGCCCTGTTCAAGCACTCATGGAAGTA...GGCTGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CAA 90 bp | TGCAGTTTCCAAACAGGGCCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCATGGGCCCCACGAGTaGGCAGCAGTCCAGTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: CSFQTGPFPVPAVISGGFHGPHE*AAVQYL Trigger: TAAGTACTGGACTGCTGCCAACTCGTGGGGCCCATG...GAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGGCCCTGTTTGGAAACTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS CCA 90 bp | CGGTTGATGGCTTTAATCATGTCTGGGTCCACTAGACACGGCTCCTaGTCGCACTCCCAATGCCCTCCCTCATGGCAGGTGCATCGATTG | + |
|
Preference number: 5 (lower is better) Translates to: RLMALIMSGSTRHGS*SHSQCPPSWQVHRL Trigger: CAATCGATGCACCTGCCATGAGGGAGGGCATTGGGAGTGCGACCAGGAGCCGTGTCTAGTGGACCCAGACATGATTAAAGCCATCAACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 |
||
| CDS-3UTR CAA 90 bp | GGCCTGGCTGACCAGGGACCTGGAATCTGTCTATACTCCCTGCAGTTTCCAAACCAGGAACCTGCACAATaGCCCTGGTCCAATGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GLADQGPGICLYSLQFPNQEPAQ*PWSNGS Trigger: CGAGCCATTGGACCAGGGCAATTGTGCAGGTTCCTG...GTTTGGAAACTGCAGGGAGTATAGACAGATTCCAGGTCCCTGGTCAGCCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCCCAGTTCCGGCTGTGATATCTGGGGGCTTCCGCCAGCCTGGTGCATCTTACTTCCATGAGTGCTaGAACAGGGCCGTTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PFPVPAVISGGFRQPGASYFHEC*NRAVFH Trigger: ATGGAAAACGGCCCTGTTCAAGCACTCATGGAAGTA...AGATGCACCAGGCTGGCGGAAGCCCCCAGATATCACAGCCGGAACTGGGAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS CCA 90 bp | AGGAACCTGCACAATTGCCCTGGTCCAATGGCTCGTGGATCAGGTTaGGCCACTTCTCTGAAGCTTCAAAGGCAGTGGGTAGCACTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RNLHNCPGPMARGSG*ATSLKLQRQWVALP Trigger: GGGAAGTGCTACCCACTGCCTTTGAAGCTTCAGAGAAGTGGCCCAACCTGATCCACGAGCCATTGGACCAGGGCAATTGTGCAGGTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS CCA 90 bp | GAGAAAGCCCAGGAACCTGCACAATTGCCCTGGTCCAATGGCTCGTaGATCAGGTTGGGCCACTTCTCTGAAGCTTCAAAGGCAGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: EKAQEPAQLPWSNGS*IRLGHFSEASKAVG Trigger: ACCCACTGCCTTTGAAGCTTCAGAGAAGTGGCCCAACCTGATCCACGAGCCATTGGACCAGGGCAATTGTGCAGGTTCCTGGGCTTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS CCA 90 bp | GCCCAGCACCGTATAAATCTCATTCATATTCATGACAGTGGAGGATaGGCGGATTGTGCCCAGGCGGTAGCGAATGCCCTCATCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AQHRINLIHIHDSGG*ADCAQAVANALIQG Trigger: ACCCTGGATGAGGGCATTCGCTACCGCCTGGGCACAATCCGCCCATCCTCCACTGTCATGAATATGAATGAGATTTATACGGTGCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCTAGGTGGGATTCTGCCTTAGCGCGCACGCGCGGATCTGAGTCTGTAGAGTACTTCCATGAGTGCTaGAACAGGGCCGTTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPRWDSALARTRGSESVEYFHEC*NRAVFH Trigger: ATGGAAAACGGCCCTGTTCAAGCACTCATGGAAGTA...CTCTACAGACTCAGATCCGCGCGTGCGCGCTAAGGCAGAATCCCACCTAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS GCA 90 bp | CATGTGTCCCAAAGAATGGATAGAGACGCGATCAGATGCGACAGCTaGTGTGGAGAAAGCCCAGGAACCTGCACAATTGCCCTGGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HVSQRMDRDAIRCDS*CGESPGTCTIALVQ Trigger: TTGGACCAGGGCAATTGTGCAGGTTCCTGGGCTTTCTCCACAGCAGCTGTCGCATCTGATCGCGTCTCTATCCATTCTTTGGGACACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
||
| CDS CCA 90 bp | GCTCGTGGATCAGGTTGGGCCACTTCTCTGAAGCTTCAAAGGCAGTaGGTAGCACTTCCCCTTGGCCCAGCACCGTATAAATCTCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARGSGWATSLKLQRQ*VALPLGPAPYKSHS Trigger: TGAATGAGATTTATACGGTGCTGGGCCAAGGGGAAGTGCTACCCACTGCCTTTGAAGCTTCAGAGAAGTGGCCCAACCTGATCCACGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CCA 90 bp | AGCAGGTTTTGCGGTGATAGGATGGGTGTCATGTGTCCCAAAGAATaGATAGAGACGCGATCAGATGCGACAGCTGCTGTGGAGAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRFCGDRMGVMCPKE*IETRSDATAAVEKA Trigger: GGCTTTCTCCACAGCAGCTGTCGCATCTGATCGCGTCTCTATCCATTCTTTGGGACACATGACACCCATCCTATCACCGCAAAACCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS-3UTR CAA 90 bp | TGGTGGCCACAGTTAATGGCCTTGATTGCTAGGTCCCTGGGAAGATCTTATCAGTACTTCCATGAGTGCTaGAACAGGGCCGTTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: WWPQLMALIARSLGRSYQYFHEC*NRAVFH Trigger: ATGGAAAACGGCCCTGTTCAAGCACTCATGGAAGTA...CTGATAAGATCTTCCCAGGGACCTAGCAATCAAGGCCATTAACTGTGGCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030560.9 |
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| CDS-3UTR CAA 90 bp | CCAAAATGGAGGCTAGGGAGATGGACAGAATTCATCAAAAAGAAGATGAGAGAGCATGGGCCCCACGAGTaGGCAGCAGTCCAGTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: PKWRLGRWTEFIKKKMREHGPHE*AAVQYL Trigger: TAAGTACTGGACTGCTGCCAACTCGTGGGGCCCATG...CTCTCTCATCTTCTTTTTGATGAATTCTGTCCATCTCCCTAGCCTCCATTTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS GCA 72 bp | CAGTATCTGCCACCGGCGTCCCGGATGCCCCGCAGGTaGAGCCCTGGCGCCAGCTCCCTGCGCCAACGACTC | + |
|
Preference number: 6 (lower is better) Translates to: QYLPPASRMPRR*SPGASSLRQRL Trigger: GAGTCGTTGGCGCAGGGAGCTGGCGCCAGGGCTGCACCTGCGGGGCATCCGGGACGCCGGTGGCAGATACTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 ENSMUST00000175992.8 |
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| CDS GCA 72 bp | CCTGCTCTTGGCAGTATCTGCCACCGGCGTCCCGGATaGCCCGCAGGTGCAGCCCTGGCGCCAGCTCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PALGSICHRRPG*PAGAALAPAPC Trigger: GCAGGGAGCTGGCGCCAGGGCTGCACCTGCGGGGCATCCGGGACGCCGGTGGCAGATACTGCCAAGAGCAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 ENSMUST00000175992.8 |
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| CDS CCA 72 bp | CTGCGCCAACGACTCCGCCGGGCCTCCAGGGCAGCCTaGCCAGCCAGCAGCAGCAAGAGCAGCCCCAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LRQRLRRASRAA*PASSSKSSPSQ Trigger: TTGGCTGGGGCTGCTCTTGCTGCTGCTGGCTGGCCAGGCTGCCCTGGAGGCCCGGCGGAGTCGTTGGCGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 ENSMUST00000175992.8 |
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| CDS GCA 72 bp | GGCCTCGACAGCACATGTCCTGCTCTTGGCAGTATCTaGCACCGGCGTCCCGGATGCCCCGCAGGTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GLDSTCPALGSI*HRRPGCPAGAA Trigger: GGCTGCACCTGCGGGGCATCCGGGACGCCGGTGGCAGATACTGCCAAGAGCAGGACATGTGCTGTCGAGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 ENSMUST00000175992.8 |
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| CDS CAA 90 bp | CAGGGCACACTCGTCAGCACGGCCTCGACAGCACATGTCCTGCTCTaGGCAGTATCTGCCACCGGCGTCCCGGATGCCCCGCAGGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QGTLVSTASTAHVLL*AVSATGVPDAPQVQ Trigger: CTGCACCTGCGGGGCATCCGGGACGCCGGTGGCAGATACTGCCAAGAGCAGGACATGTGCTGTCGAGGCCGTGCTGACGAGTGTGCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 ENSMUST00000175992.8 |
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| CDS GCA 72 bp | CCTGACCATTGGGGCAGCGGGAAGTGGCTTGGCGCTTaGCCCGCCCCATGGCGCGGCTGTGCATCATACAAC | + |
|
Preference number: 6 (lower is better) Translates to: PDHWGSGKWLGA*PAPWRGCASYN Trigger: GTTGTATGATGCACAGCCGCGCCATGGGGCGGGGCAAGCGCCAAGCCACTTCCCGCTGCCCCAATGGTCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CCA 72 bp | TCGTCAGCACGGCCTCGACAGCACATGTCCTGCTCTTaGCAGTATCTGCCACCGGCGTCCCGGATGCCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSARPRQHMSCS*QYLPPASRMPR Trigger: GCGGGGCATCCGGGACGCCGGTGGCAGATACTGCCAAGAGCAGGACATGTGCTGTCGAGGCCGTGCTGACGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 ENSMUST00000175992.8 |
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| CDS CCA 72 bp | AGTGGGGCTGGCCTCGTTCTGCTCACGGCCGGAGAATaGGTAACAGTTGTCAGACACCACCCCGCGGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SGAGLVLLTAGE*VTVVRHHPAAP Trigger: CGGCGCCGCGGGGTGGTGTCTGACAACTGTTACCCATTCTCCGGCCGTGAGCAGAACGAGGCCAGCCCCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CAA 72 bp | CTCGTCAGCACGGCCTCGACAGCACATGTCCTGCTCTaGGCAGTATCTGCCACCGGCGTCCCGGATGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LVSTASTAHVLL*AVSATGVPDAP Trigger: CGGGGCATCCGGGACGCCGGTGGCAGATACTGCCAAGAGCAGGACATGTGCTGTCGAGGCCGTGCTGACGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 ENSMUST00000175992.8 |
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| CDS GCA 72 bp | CGCCCAGCACGAAGGTCTCGATGTCGCACTCGTTGGTaGCACGCACGATCCGGAAGTGGCCCCTTTCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPARRSRCRTRW*HARSGSGPFHP Trigger: GGGGTGAAAGGGGCCACTTCCGGATCGTGCGTGGCACCAACGAGTGCGACATCGAGACCTTCGTGCTGGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CCA 72 bp | GCCCCATGGCGCGGCTGTGCATCATACAACGAGGAGTaGGGCTGGCCTCGTTCTGCTCACGGCCGGAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: APWRGCASYNEE*GWPRSAHGRRM Trigger: CATTCTCCGGCCGTGAGCAGAACGAGGCCAGCCCCACTCCTCGTTGTATGATGCACAGCCGCGCCATGGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS GCA 72 bp | GCACACTCGTCAGCACGGCCTCGACAGCACATGTCCTaGTCTTGGCAGTATCTGCCACCGGCGTCCCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: AHSSARPRQHMS*SWQYLPPASRM Trigger: CATCCGGGACGCCGGTGGCAGATACTGCCAAGAGCAGGACATGTGCTGTCGAGGCCGTGCTGACGAGTGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 ENSMUST00000175992.8 |
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| CDS GCA 72 bp | CACCAAGCGCCATCAAGACGCCCACCTCGGCAGCCCTaGTGGTGGTGGGTATCACAGGACAGCAGGTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: HQAPSRRPPRQP*WWWVSQDSRFC Trigger: GCAAAACCTGCTGTCCTGTGATACCCACCACCAGCAGGGCTGCCGAGGTGGGCGTCTTGATGGCGCTTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CCA 72 bp | GCGCCATCAAGACGCCCACCTCGGCAGCCCTGCTGGTaGTGGGTATCACAGGACAGCAGGTTTTGCGGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: APSRRPPRQPCW*WVSQDSRFCGD Trigger: ATCACCGCAAAACCTGCTGTCCTGTGATACCCACCACCAGCAGGGCTGCCGAGGTGGGCGTCTTGATGGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CCA 72 bp | CAAGCGCCATCAAGACGCCCACCTCGGCAGCCCTGCTaGTGGTGGGTATCACAGGACAGCAGGTTTTGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: QAPSRRPPRQPC*WWVSQDSRFCG Trigger: ACCGCAAAACCTGCTGTCCTGTGATACCCACCACCAGCAGGGCTGCCGAGGTGGGCGTCTTGATGGCGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CCA 72 bp | TGGCGCGGCTGTGCATCATACAACGAGGAGTGGGGCTaGCCTCGTTCTGCTCACGGCCGGAGAATGGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: WRGCASYNEEWG*PRSAHGRRMGN Trigger: GTTACCCATTCTCCGGCCGTGAGCAGAACGAGGCCAGCCCCACTCCTCGTTGTATGATGCACAGCCGCGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CCA 72 bp | AGACGCCCAGCACGAAGGTCTCGATGTCGCACTCGTTaGTGCCACGCACGATCCGGAAGTGGCCCCTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RRPARRSRCRTR*CHARSGSGPFH Trigger: GTGAAAGGGGCCACTTCCGGATCGTGCGTGGCACCAACGAGTGCGACATCGAGACCTTCGTGCTGGGCGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS GCA 72 bp | CCCAGAAGTCGGGGCAGCAGTCAGAGACGGTGCGGTTaGAGAAGAGGTCACAGTAACAGGTGGCTCCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRSRGSSQRRCG*RRGHSNRWLPG Trigger: ACCTGGGAGCCACCTGTTACTGTGACCTCTTCTGCAACCGCACCGTCTCTGACTGCTGCCCCGACTTCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 ENSMUST00000175992.8 |
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| CDS GCA 72 bp | GGGTCCACTAGACACGGCTCCTGGTCGCACTCCCAATaGCCTCCCTCATGGCAGGTGCATCGATTGCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GSTRHGSWSHSQ*PPSWQVHRLQL Trigger: CAACTGCAATCGATGCACCTGCCATGAGGGAGGGCATTGGGAGTGCGACCAGGAGCCGTGTCTAGTGGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 |
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| CDS CCA 72 bp | CCATCAAGACGCCCACCTCGGCAGCCCTGCTGGTGGTaGGTATCACAGGACAGCAGGTTTTGCGGTGATAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSRRPPRQPCWW*VSQDSRFCGDR Trigger: CCTATCACCGCAAAACCTGCTGTCCTGTGATACCCACCACCAGCAGGGCTGCCGAGGTGGGCGTCTTGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS GCA 72 bp | CAGCTGCTGTGGAGAAAGCCCAGGAACCTGCACAATTaGCCTGGTCCAATGGCTCGTGGATCAGGTTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QLLWRKPRNLHN*PGPMARGSGWA Trigger: GGCCCAACCTGATCCACGAGCCATTGGACCAGGGCAATTGTGCAGGTTCCTGGGCTTTCTCCACAGCAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CCA 72 bp | ATGCCCTCATCCAGGGTCATGCCCCAGAAGGCACTGTaGTTCCCAGCCTGCCACCATCGATTGCAGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: MPSSRVMPQKAL*FPACHHRLQLS Trigger: GGACAACTGCAATCGATGGTGGCAGGCTGGGAACCACAGTGCCTTCTGGGGCATGACCCTGGATGAGGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175992.8 |
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| CDS GCA 72 bp | AGAAGTCCCAGAAGTCGGGGCAGCAGTCAGAGACGGTaGGGTTGCAGAAGAGGTCACAGTAACAGGTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSPRSRGSSQRR*GCRRGHSNRWL Trigger: GAGCCACCTGTTACTGTGACCTCTTCTGCAACCGCACCGTCTCTGACTGCTGCCCCGACTTCTGGGACTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 ENSMUST00000175992.8 |
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| CDS GCA 72 bp | CCTGGTCGCACTCCCAATGCCCTCCCTCATGGCAGGTaGATCGATTGCAGTTGTCCCAGTAGGTTCCGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGRTPNALPHGR*IDCSCPSRFRR Trigger: TCTTCGGAACCTACTGGGACAACTGCAATCGATGCACCTGCCATGAGGGAGGGCATTGGGAGTGCGACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 |
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| CDS CCA 72 bp | GCATCGATTGCAGTTGTCCCAGTAGGTTCCGAAGACTaGGTAGATCCGGCCCCCATGCATGCACCCTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ASIAVVPVGSED*VDPAPMHAPLD Trigger: GTCCAAGGGTGCATGCATGGGGGCCGGATCTACCCAGTCTTCGGAACCTACTGGGACAACTGCAATCGATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 |
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| CDS CCA 72 bp | GCTTTAATCATGTCTGGGTCCACTAGACACGGCTCCTaGTCGCACTCCCAATGCCCTCCCTCATGGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ALIMSGSTRHGS*SHSQCPPSWQV Trigger: CACCTGCCATGAGGGAGGGCATTGGGAGTGCGACCAGGAGCCGTGTCTAGTGGACCCAGACATGATTAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 |
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| CDS CCA 72 bp | CCATCGATTGCAGTTGTCCCAGTAGGTTCCGAAGACTaGGTAGATCCGGCCCCCATGCATGCACCCTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PSIAVVPVGSED*VDPAPMHAPLD Trigger: GTCCAAGGGTGCATGCATGGGGGCCGGATCTACCCAGTCTTCGGAACCTACTGGGACAACTGCAATCGATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175992.8 |
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| CDS CAA 72 bp | ACAGCTGCTGTGGAGAAAGCCCAGGAACCTGCACAATaGCCCTGGTCCAATGGCTCGTGGATCAGGTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TAAVEKAQEPAQ*PWSNGSWIRLG Trigger: GCCCAACCTGATCCACGAGCCATTGGACCAGGGCAATTGTGCAGGTTCCTGGGCTTTCTCCACAGCAGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CAA 90 bp | TCAGATGCGACAGCTGCTGTGGAGAAAGCCCAGGAACCTGCACAATaGCCCTGGTCCAATGGCTCGTGGATCAGGTTGGGCCACTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SDATAAVEKAQEPAQ*PWSNGSWIRLGHFS Trigger: AGAGAAGTGGCCCAACCTGATCCACGAGCCATTGGACCAGGGCAATTGTGCAGGTTCCTGGGCTTTCTCCACAGCAGCTGTCGCATCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS GCA 72 bp | CCGGCCTCCCCTGGCTTACAGGTGTGTGGCTGTAGATaGCACGCTGGTACAAGAAGAAGTCCTCGTGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: PASPGLQVCGCR*HAGTRRSPRVL Trigger: AAGTACACGAGGACTTCTTCTTGTACCAGCGTGGCATCTACAGCCACACACCTGTAAGCCAGGGGAGGCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS TCA 72 bp | TCTCCTTCTCATCAGAGCCCAGGCGGTAGGCAGGCGTaGCCTGGTAGATGTCGTTGGAATCAACCTGACCAT | + |
|
Preference number: 6 (lower is better) Translates to: SPSHQSPGGRQA*PGRCRWNQPDH Trigger: ATGGTCAGGTTGATTCCAACGACATCTACCAGGTCACGCCTGCCTACCGCCTGGGCTCTGATGAGAAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS GCA 72 bp | ACTCCCAATGCCCTCCCTCATGGCAGGTGCATCGATTaGAGTTGTCCCAGTAGGTTCCGAAGACTGGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: TPNALPHGRCID*SCPSRFRRLGR Trigger: TCTACCCAGTCTTCGGAACCTACTGGGACAACTGCAATCGATGCACCTGCCATGAGGGAGGGCATTGGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000132545.3 |
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| CDS GCA 72 bp | CCCTGCTGGTGGTGGGTATCACAGGACAGCAGGTTTTaGGGTGATAGGATGGGTGTCATGTGTCCCAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PCWWWVSQDSRF*GDRMGVMCPKE Trigger: TTCTTTGGGACACATGACACCCATCCTATCACCGCAAAACCTGCTGTCCTGTGATACCCACCACCAGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CCA 72 bp | TCAGGTTGGGCCACTTCTCTGAAGCTTCAAAGGCAGTaGGTAGCACTTCCCCTTGGCCCAGCACCGTATAAA | + |
|
Preference number: 6 (lower is better) Translates to: SGWATSLKLQRQ*VALPLGPAPYK Trigger: TTTATACGGTGCTGGGCCAAGGGGAAGTGCTACCCACTGCCTTTGAAGCTTCAGAGAAGTGGCCCAACCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CCA 72 bp | CACAATTGCCCTGGTCCAATGGCTCGTGGATCAGGTTaGGCCACTTCTCTGAAGCTTCAAAGGCAGTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: HNCPGPMARGSG*ATSLKLQRQWV Trigger: TACCCACTGCCTTTGAAGCTTCAGAGAAGTGGCCCAACCTGATCCACGAGCCATTGGACCAGGGCAATTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CCA 72 bp | CAGGAACCTGCACAATTGCCCTGGTCCAATGGCTCGTaGATCAGGTTGGGCCACTTCTCTGAAGCTTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QEPAQLPWSNGS*IRLGHFSEASK Trigger: CTTTGAAGCTTCAGAGAAGTGGCCCAACCTGATCCACGAGCCATTGGACCAGGGCAATTGTGCAGGTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS GCA 72 bp | CAAAGAATGGATAGAGACGCGATCAGATGCGACAGCTaGTGTGGAGAAAGCCCAGGAACCTGCACAATTGCC | + |
|
Preference number: 6 (lower is better) Translates to: QRMDRDAIRCDS*CGESPGTCTIA Trigger: GGCAATTGTGCAGGTTCCTGGGCTTTCTCCACAGCAGCTGTCGCATCTGATCGCGTCTCTATCCATTCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS CCA 72 bp | TGCGGTGATAGGATGGGTGTCATGTGTCCCAAAGAATaGATAGAGACGCGATCAGATGCGACAGCTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: CGDRMGVMCPKE*IETRSDATAAV Trigger: CACAGCAGCTGTCGCATCTGATCGCGTCTCTATCCATTCTTTGGGACACATGACACCCATCCTATCACCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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| CDS TCA 72 bp | CACGCTGGTACAAGAAGAAGTCCTCGTGTACTTCCATaGGTGCTTGAACAGGGCCGTTTTCCATTAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HAGTRRSPRVLP*VLEQGRFPLAP Trigger: AGGAGCTAATGGAAAACGGCCCTGTTCAAGCACTCATGGAAGTACACGAGGACTTCTTCTTGTACCAGCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030560.9 ENSMUST00000105998.8 ENSMUST00000105999.9 ENSMUST00000175992.8 |
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