Pregenerated sensors for TIMP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030317Ensembl transcript IDs: ENSMUST00000032462.9, ENSMUST00000205131.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAAGATAGGGCCCCACGTCTTGGTGCCAAGCCAGAGTGTGGGCTaGAGCAGGACAGAGGTCTTTAGGCAGAACTGGCATCAGCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: GKIGPHVLVPSQSVG*SRTEVFRQNWHQLP Trigger: AGGGAGCTGATGCCAGTTCTGCCTAAAGACCTCTGTCCTGCTGCAGCCCACACTCTGGCTTGGCACCAAGACGTGGGGCCCTATCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR CCA 90 bp | GAACTGGCATCAGCTCCCTGGGGATGCTGGAGAGCCTTAGAAACCTaGGCAGAAATGGAAGCCCGCAGATCCAGGTGGGCAGGTAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: ELASAPWGCWRALET*AEMEARRSRWAGRA Trigger: AGCCCTACCTGCCCACCTGGATCTGCGGGCTTCCATTTCTGCCCAGGTTTCTAAGGCTCTCCAGCATCCCCAGGGAGCTGATGCCAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR TCA 90 bp | GAACCTGGGCATTCTCCCAGTATGGCCTCCATACCACACGTGCTCTaGGGCTTCAGCCGCAGTCTCCTCACATGCAAAATGGGAGACCTG | + |
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Preference number: 1 (lower is better) Translates to: EPGHSPSMASIPHVL*GFSRSLLTCKMGDL Trigger: CAGGTCTCCCATTTTGCATGTGAGGAGACTGCGGCTGAAGCCTCAGAGCACGTGTGGTATGGAGGCCATACTGGGAGAATGCCCAGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR GCA 90 bp | TGCCAACTGGGCCAGACCTTCTGTCAGCAAAAGTATCAGGGGACTTaGAGGACAAGAGGAAGAGCGGGCTGGCTGTTCAGCTCCCACTGT | + |
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Preference number: 1 (lower is better) Translates to: CQLGQTFCQQKYQGT*RTRGRAGWLFSSHC Trigger: ACAGTGGGAGCTGAACAGCCAGCCCGCTCTTCCTCTTGTCCTGCAAGTCCCCTGATACTTTTGCTGACAGAAGGTCTGGCCCAGTTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR GCA 90 bp | ACTGGCTGTCATTTTAGTCTTGGCTGTCCCAGGGCCCTGGGAGTCTaGCGGAGGCCTTCCTGGCATCTGTGTGGTTGTCTGTGTAACTCA | + |
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Preference number: 1 (lower is better) Translates to: TGCHFSLGCPRALGV*RRPSWHLCGCLCNS Trigger: TGAGTTACACAGACAACCACACAGATGCCAGGAAGGCCTCCGGCAGACTCCCAGGGCCCTGGGACAGCCAAGACTAAAATGACAGCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR GCA 90 bp | CAAAGGAACCTGGGCATTCTCCCAGTATGGCCTCCATACCACACGTaGTCTGAGGCTTCAGCCGCAGTCTCCTCACATGCAAAATGGGAG | + |
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Preference number: 1 (lower is better) Translates to: QRNLGILPVWPPYHT*SEASAAVSSHAKWE Trigger: CTCCCATTTTGCATGTGAGGAGACTGCGGCTGAAGCCTCAGAGCACGTGTGGTATGGAGGCCATACTGGGAGAATGCCCAGGTTCCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR CCA 90 bp | CCCCACTTGGAGTCTCACTGCCAGAGCCTTCCAAGTGCTGTGTTCTaGGACAGAGATCATAGTTGGTCCCCTCCCACTTCTTCCTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: PHLESHCQSLPSAVF*DRDHSWSPPTSSSK Trigger: TTTGGAGGAAGAAGTGGGAGGGGACCAACTATGATCTCTGTCCCAGAACACAGCACTTGGAAGGCTCTGGCAGTGAGACTCCAAGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR GCA 90 bp | CAAGTTGTGAGCTGGAGATGTGAACAGCAGACACAAGCTGTCACATaGCCCACAGCCTCCATTTGCTGGCCAGGCCATCCACTTGTCATT | + |
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Preference number: 1 (lower is better) Translates to: QVVSWRCEQQTQAVT*PTASICWPGHPLVI Trigger: AATGACAAGTGGATGGCCTGGCCAGCAAATGGAGGCTGTGGGGCATGTGACAGCTTGTGTCTGCTGTTCACATCTCCAGCTCACAACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR GCA 90 bp | TGTGAACAGCAGACACAAGCTGTCACATGCCCCACAGCCTCCATTTaGTGGCCAGGCCATCCACTTGTCATTTTCCATTATCTGGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: CEQQTQAVTCPTASI*WPGHPLVIFHYLAA Trigger: TGCTGCCAGATAATGGAAAATGACAAGTGGATGGCCTGGCCAGCAAATGGAGGCTGTGGGGCATGTGACAGCTTGTGTCTGCTGTTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR CCA 90 bp | GAACAGCAGACACAAGCTGTCACATGCCCCACAGCCTCCATTTGCTaGCCAGGCCATCCACTTGTCATTTTCCATTATCTGGCAGCAACA | + |
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Preference number: 1 (lower is better) Translates to: EQQTQAVTCPTASIC*PGHPLVIFHYLAAT Trigger: TGTTGCTGCCAGATAATGGAAAATGACAAGTGGATGGCCTGGCCAGCAAATGGAGGCTGTGGGGCATGTGACAGCTTGTGTCTGCTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR CCA 90 bp | CACACGTGCTCTGAGGCTTCAGCCGCAGTCTCCTCACATGCAAAATaGGAGACCTGGTGTGGACTCTATCTGGTCTCTTTCATCATTAAT | + |
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Preference number: 1 (lower is better) Translates to: HTCSEASAAVSSHAK*ETWCGLYLVSFIIN Trigger: ATTAATGATGAAAGAGACCAGATAGAGTCCACACCAGGTCTCCCATTTTGCATGTGAGGAGACTGCGGCTGAAGCCTCAGAGCACGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR TCA 90 bp | GATAAGATACCTTTCCAACCCTTGACAAGTTGTGAGCTGGAGATGTaGACAGCAGACACAAGCTGTCACATGCCCCACAGCCTCCATTTG | + |
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Preference number: 1 (lower is better) Translates to: DKIPFQPLTSCELEM*TADTSCHMPHSLHL Trigger: CAAATGGAGGCTGTGGGGCATGTGACAGCTTGTGTCTGCTGTTCACATCTCCAGCTCACAACTTGTCAAGGGTTGGAAAGGTATCTTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR TCA 90 bp | CAGGAAGATGATCTATATGTCTTCCCACTGACCCTCCAGTCTTCCTaGAGAACAGCCTCATTCATGACACCTCTTGTGCAGACTCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: QEDDLYVFPLTLQSS*RTASFMTPLVQTLL Trigger: CAGCAGAGTCTGCACAAGAGGTGTCATGAATGAGGCTGTTCTTCAGGAAGACTGGAGGGTCAGTGGGAAGACATATAGATCATCTTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR GCA 90 bp | TTACTATGTTGCCCAAGCTGGGATCAAATTTGGAATCCTCCTTCCTaGCCCAGCCTCTCAAGTACTGCGATTACAGGAGTGTTACCACAC | + |
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Preference number: 1 (lower is better) Translates to: LLCCPSWDQIWNPPS*PSLSSTAITGVLPH Trigger: GTGTGGTAACACTCCTGTAATCGCAGTACTTGAGAGGCTGGGGCAGGAAGGAGGATTCCAAATTTGATCCCAGCTTGGGCAACATAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
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| 3UTR TCA 90 bp | GAAAGGGTGAGGGTCAGGTTGGATAGTCAGAGCAAACTGAAGAATTaGTGGATGAGAAGGGCAATGAAGGATGCGGTGGACAAGGAACAA | + |
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Preference number: 1 (lower is better) Translates to: ERVRVRLDSQSKLKN*WMRRAMKDAVDKEQ Trigger: TTGTTCCTTGTCCACCGCATCCTTCATTGCCCTTCTCATCCATCAATTCTTCAGTTTGCTCTGACTATCCAACCTGACCCTCACCCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR GCA 90 bp | TCAGAGCAAACTGAAGAATTGATGGATGAGAAGGGCAATGAAGGATaGGGTGGACAAGGAACAAAGGAACCTGGGCATTCTCCCAGTATG | + |
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Preference number: 1 (lower is better) Translates to: SEQTEELMDEKGNEG*GGQGTKEPGHSPSM Trigger: CATACTGGGAGAATGCCCAGGTTCCTTTGTTCCTTGTCCACCGCATCCTTCATTGCCCTTCTCATCCATCAATTCTTCAGTTTGCTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR GCA 90 bp | GGATCAAATTTGGAATCCTCCTTCCTGCCCCAGCCTCTCAAGTACTaGGATTACAGGAGTGTTACCACACACCTGGCTCAGATTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: GSNLESSFLPQPLKY*DYRSVTTHLAQIFF Trigger: AAAGAAAATCTGAGCCAGGTGTGTGGTAACACTCCTGTAATCGCAGTACTTGAGAGGCTGGGGCAGGAAGGAGGATTCCAAATTTGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
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| 3UTR CCA 90 bp | GAACTGACCCTTCTCTGCTCATATCTAAAGGGAGTCTGGAAAGGATaGGCCTTTTGTCCAAAGGCTACTGTTGAGTTAAGGCTCACCAGA | + |
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Preference number: 1 (lower is better) Translates to: ELTLLCSYLKGVWKG*AFCPKATVELRLTR Trigger: TCTGGTGAGCCTTAACTCAACAGTAGCCTTTGGACAAAAGGCCCATCCTTTCCAGACTCCCTTTAGATATGAGCAGAGAAGGGTCAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR GCA 90 bp | TCTGTTCCAGAAGTTGAGGATACACTGACATTCTTTCTTGTCTTTTaGAGTTTGCTCAGATGGTGGCCATCTTCAAGACACTGGGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: SVPEVEDTLTFFLVF*SLLRWWPSSRHWEG Trigger: CCCCTCCCAGTGTCTTGAAGATGGCCACCATCTGAGCAAACTGCAAAAGACAAGAAAGAATGTCAGTGTATCCTCAACTTCTGGAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR GCA 90 bp | TCTTTGCCTTCCCCAACTAAAGCGTTCGTCCTTGAGGAATCTGCATaGGCCTTTCCTTTCTCTGTATCATCAGTGTGTTTAACACAGTGC | + |
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Preference number: 1 (lower is better) Translates to: SLPSPTKAFVLEESA*AFPFSVSSVCLTQC Trigger: GCACTGTGTTAAACACACTGATGATACAGAGAAAGGAAAGGCGCATGCAGATTCCTCAAGGACGAACGCTTTAGTTGGGGAAGGCAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR CCA 90 bp | AAGCAGATGGAACTGACCCTTCTCTGCTCATATCTAAAGGGAGTCTaGAAAGGATGGGCCTTTTGTCCAAAGGCTACTGTTGAGTTAAGG | + |
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Preference number: 1 (lower is better) Translates to: KQMELTLLCSYLKGV*KGWAFCPKATVELR Trigger: CCTTAACTCAACAGTAGCCTTTGGACAAAAGGCCCATCCTTTCCAGACTCCCTTTAGATATGAGCAGAGAAGGGTCAGTTCCATCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR TCA 90 bp | TCCTCTGTGTCCACCCCCAGAAGTTCGAAGGAAAAGATAAATGGTTaGTTGAAGGCTGTGAGGATGTTTCATATTGAGCAACCTGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: SSVSTPRSSKEKING*LKAVRMFHIEQPGG Trigger: ACCTCCAGGTTGCTCAATATGAAACATCCTCACAGCCTTCAATCAACCATTTATCTTTTCCTTCGAACTTCTGGGGGTGGACACAGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR TCA 90 bp | TTGTGGGATGGAGGTGGACTGACTAGGAAAGTCCTCTGCTTCCTGTaGGAAGAGCATTGCCTCTGTAGAATCTGTAGAATTGGAAAAGTA | + |
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Preference number: 1 (lower is better) Translates to: LWDGGGLTRKVLCFL*EEHCLCRICRIGKV Trigger: TACTTTTCCAATTCTACAGATTCTACAGAGGCAATGCTCTTCTCACAGGAAGCAGAGGACTTTCCTAGTCAGTCCACCTCCATCCCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR TCA 90 bp | CACAGCACAGATGGCCCTGCTTACCAGTTGACCACACATCAAAAATaGAAACTGGTCCTGAGCTGTCAAAAAGAACTGATAATCTCTACC | + |
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Preference number: 1 (lower is better) Translates to: HSTDGPAYQLTTHQK*KLVLSCQKELIIST Trigger: GGTAGAGATTATCAGTTCTTTTTGACAGCTCAGGACCAGTTTTCATTTTTGATGTGTGGTCAACTGGTAAGCAGGGCCATCTGTGCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR TCA 90 bp | GGAAAAGATAAATGGTTGATTGAAGGCTGTGAGGATGTTTCATATTaGGCAACCTGGAGGTTACTTTGCATCTTCCTCTCCATCCCCACC | + |
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Preference number: 1 (lower is better) Translates to: GKDKWLIEGCEDVSY*ATWRLLCIFLSIPT Trigger: GGTGGGGATGGAGAGGAAGATGCAAAGTAACCTCCAGGTTGCTCAATATGAAACATCCTCACAGCCTTCAATCAACCATTTATCTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR TCA 90 bp | AGGTTTATCTCACTCTGTTACTCAGAACGACATGTGTTTGGAGTCTaGGACTCAAGTTTCAATCCTTGCTTCACATCTCTTCAGTTCTAT | + |
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Preference number: 1 (lower is better) Translates to: RFISLCYSERHVFGV*DSSFNPCFTSLQFY Trigger: ATAGAACTGAAGAGATGTGAAGCAAGGATTGAAACTTGAGTCTCAGACTCCAAACACATGTCGTTCTGAGTAACAGAGTGAGATAAACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR GCA 90 bp | TTCTATATTACTGAAGGCTGTAGCACCCAAAGGCCCATGTTTCCCTaGATTTTAATAGAATCTTTACCAAAAACTGACCGTGATTTGATG | + |
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Preference number: 1 (lower is better) Translates to: FYITEGCSTQRPMFP*ILIESLPKTDRDLM Trigger: CATCAAATCACGGTCAGTTTTTGGTAAAGATTCTATTAAAATGCAGGGAAACATGGGCCTTTGGGTGCTACAGCCTTCAGTAATATAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR TCA 90 bp | TTGTACAACTTTATGACAGTCAGTCACAGCTTCTCCCTTATCATATaGGCTAAGAAAAGCCAGTTAAACAAAGCCAGAATAAAAACTCTC | + |
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Preference number: 1 (lower is better) Translates to: LYNFMTVSHSFSLII*AKKSQLNKARIKTL Trigger: GAGAGTTTTTATTCTGGCTTTGTTTAACTGGCTTTTCTTAGCTCATATGATAAGGGAGAAGCTGTGACTGACTGTCATAAAGTTGTACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR CAA 90 bp | CTCAGAGACCCAACTAAAGCCTGGGAACTGGCTGTCATTTTAGTCTaGGCTGTCCCAGGGCCCTGGGAGTCTGCCGGAGGCCTTCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LRDPTKAWELAVILV*AVPGPWESAGGLPG Trigger: GCCAGGAAGGCCTCCGGCAGACTCCCAGGGCCCTGGGACAGCCAAGACTAAAATGACAGCCAGTTCCCAGGCTTTAGTTGGGTCTCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR CAA 90 bp | ATGCCAACTGGGCCAGACCTTCTGTCAGCAAAAGTATCAGGGGACTaGCAGGACAAGAGGAAGAGCGGGCTGGCTGTTCAGCTCCCACTG | + |
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Preference number: 2 (lower is better) Translates to: MPTGPDLLSAKVSGD*QDKRKSGLAVQLPL Trigger: CAGTGGGAGCTGAACAGCCAGCCCGCTCTTCCTCTTGTCCTGCAAGTCCCCTGATACTTTTGCTGACAGAAGGTCTGGCCCAGTTGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGACATACTACCCCAATCACCGAGAGATGGTAGGTGGCTAAGTGGAGCTTTGGTGACTCTAGAGGTCTaGCAAGAGCCTCAGCACCTC | + |
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Preference number: 2 (lower is better) Translates to: ADILPQSPRDGRWLSGALVTLEV*QEPQHL Trigger: GAGGTGCTGAGGCTCTTGCCAGACCTCTAGAGTCAC...CAAAGCTCCACTTAGCCACCTACCATCTCTCGGTGATTGGGGTAGTATGTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGTCAAGGAGTACTGGCTGACTGTATACCAATCCAGCCTTTCATCCCCAATGCCCACAGCCTCCATTTaGTGGCCAGGCCATCCACTT | + |
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Preference number: 2 (lower is better) Translates to: KVKEYWLTVYQSSLSSPMPTASI*WPGHPL Trigger: AAGTGGATGGCCTGGCCAGCAAATGGAGGCTGTGGG...CATTGGGGATGAAAGGCTGGATTGGTATACAGTCAGCCAGTACTCCTTGACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR-3UTR GCA 90 bp | CTGAGACTACATCATCCTCCTGCCTCCGCTGAGTGTTGTGATTACACGTGTGCTCCAGAGCCTTCCAAGTaGTGTGTTCTGGGACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LRLHHPPASAECCDYTCAPEPSK*CVLGQR Trigger: TCTCTGTCCCAGAACACAGCACTTGGAAGGCTCTGG...AGCACACGTGTAATCACAACACTCAGCGGAGGCAGGAGGATGATGTAGTCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR-3UTR CCA 90 bp | GTAAGTCCGTGCCAGGAAGATGATCTATATGTCTTCCCACTGACCCTCCAGTCTACAGCCTCCATTTGCTaGCCAGGCCATCCACTTGTC | + |
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Preference number: 2 (lower is better) Translates to: VSPCQEDDLYVFPLTLQSTASIC*PGHPLV Trigger: GACAAGTGGATGGCCTGGCCAGCAAATGGAGGCTGT...AGACTGGAGGGTCAGTGGGAAGACATATAGATCATCTTCCTGGCACGGACTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTGCCCCAGCCTCTCAAGTACTGCGATTACAGGAGTGTTACCACACACCTGCCACATGTGGTTGCTaGTGTCCCAGAGTACTTAAC | + |
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Preference number: 2 (lower is better) Translates to: LPAPASQVLRLQECYHTPATCGC*CPRVLN Trigger: GTTAAGTACTCTGGGACACCAGCAACCACATGTGGC...AGGTGTGTGGTAACACTCCTGTAATCGCAGTACTTGAGAGGCTGGGGCAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGCTGGGATCAAATTTGGAATCCTCCTTCCTGCCCCAGCCTCTCAAGTACTTCAGTCTGCCACATGTaGTTGCTGGTGTCCCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: PSWDQIWNPPSCPSLSSTSVCHM*LLVSQS Trigger: ACTCTGGGACACCAGCAACCACATGTGGCAGACTGA...AGTACTTGAGAGGCTGGGGCAGGAAGGAGGATTCCAAATTTGATCCCAGCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGACATACTACCCCAATCACCGAGAGATGGTAGGTGGCTAAGTGGAGCTTTGCCTCTCAGCTGCTACTaGAACTTGGCCTCAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: ADILPQSPRDGRWLSGALPLSCY*NLASGK Trigger: TTTTCCTGAGGCCAAGTTTCAGTAGCAGCTGAGAGG...CAAAGCTCCACTTAGCCACCTACCATCTCTCGGTGATTGGGGTAGTATGTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR-3UTR GCA 90 bp | CATCTGTGTGGTTGTCTGTGTAACTCACCCACACATAGGGAAGATAGGGCCCCAACCTGGAGGTTACTTTaGATCTTCCTCTCCATCCCC | + |
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Preference number: 2 (lower is better) Translates to: HLCGCLCNSPTHREDRAPTWRLL*IFLSIP Trigger: GGGGATGGAGAGGAAGATGCAAAGTAACCTCCAGGT...TGGGGCCCTATCTTCCCTATGTGTGGGTGAGTTACACAGACAACCACACAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR-3UTR GCA 90 bp | CATCTGTGTGGTTGTCTGTGTAACTCACCCACACATAGGGAAGATAGGGCCCCACTCTTGTGCAGACTCTaGTGGGTCCATATAGCACAC | + |
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Preference number: 2 (lower is better) Translates to: HLCGCLCNSPTHREDRAPLLCRL*WVHIAH Trigger: GTGTGCTATATGGACCCAGCAGAGTCTGCACAAGAG...TGGGGCCCTATCTTCCCTATGTGTGGGTGAGTTACACAGACAACCACACAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR-3UTR GCA 90 bp | CCAAGCTGGGATCAAATTTGGAATCCTCCTTCCTGCCCCAGCCTCTCAAGTACTTCTGCCACATGTGGTTaGTGGTGTCCCAGAGTACTT | + |
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Preference number: 2 (lower is better) Translates to: PSWDQIWNPPSCPSLSSTSATCG*WCPRVL Trigger: AAGTACTCTGGGACACCAGCAACCACATGTGGCAGA...AGTACTTGAGAGGCTGGGGCAGGAAGGAGGATTCCAAATTTGATCCCAGCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
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| 3UTR-3UTR TCA 90 bp | CATCTGTGTGGTTGTCTGTGTAACTCACCCACACATAGGGAAGATAGGGCCCCATACCTTTCCAACCCTTaGCAAGTTGTGAGCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: HLCGCLCNSPTHREDRAPYLSNP*QVVSWR Trigger: TCTCCAGCTCACAACTTGTCAAGGGTTGGAAAGGTA...TGGGGCCCTATCTTCCCTATGTGTGGGTGAGTTACACAGACAACCACACAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR-3UTR TCA 90 bp | CATCTGTGTGGTTGTCTGTGTAACTCACCCACACATAGGGAAGATAGGGCCCCATCCGTGCCAGGAAGATaGTCTATATGTCTTCCCACT | + |
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Preference number: 2 (lower is better) Translates to: HLCGCLCNSPTHREDRAPSVPGR*SICLPT Trigger: AGTGGGAAGACATATAGATCATCTTCCTGGCACGGA...TGGGGCCCTATCTTCCCTATGTGTGGGTGAGTTACACAGACAACCACACAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGTCAAGGAGTACTGGCTGACTGTATACCAATCCAGCCTTTCATCCCCAATGATTACACGTGTGCTCTaGGCTCCCTGCTCCAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: KVKEYWLTVYQSSLSSPMITRVL*APCSSS Trigger: AGAACTGGAGCAGGGAGCGCAGAGCACACGTGTAAT...CATTGGGGATGAAAGGCTGGATTGGTATACAGTCAGCCAGTACTCCTTGACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGACATACTACCCCAATCACCGAGAGATGGTAGGTGGCTAAGTGGAGCTTTGAGGACCACAGAGAACTaGCTTGGTCTTCAGAATGCT | + |
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Preference number: 2 (lower is better) Translates to: ADILPQSPRDGRWLSGALRTTEN*LGLQNA Trigger: AGCATTCTGAAGACCAAGCCAGTTCTCTGTGGTCCT...CAAAGCTCCACTTAGCCACCTACCATCTCTCGGTGATTGGGGTAGTATGTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR-3UTR CCA 90 bp | GTAAGTCCGTGCCAGGAAGATGATCTATATGTCTTCCCACTGACCCTCCAGTCTGACAGAGATCATAGTTaGTCCCCTCCCACTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: VSPCQEDDLYVFPLTLQSDRDHS*SPPTSS Trigger: GGAAGAAGTGGGAGGGGACCAACTATGATCTCTGTC...AGACTGGAGGGTCAGTGGGAAGACATATAGATCATCTTCCTGGCACGGACTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGTCAAGGAGTACTGGCTGACTGTATACCAATCCAGCCTTTCATCCCCAATGGCCACCTCCAAATGGTaGCAAGGCAGAGTTAATCCT | + |
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Preference number: 2 (lower is better) Translates to: KVKEYWLTVYQSSLSSPMATSKW*QGRVNP Trigger: AGGATTAACTCTGCCTTGTCACCATTTGGAGGTGGC...CATTGGGGATGAAAGGCTGGATTGGTATACAGTCAGCCAGTACTCCTTGACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR-3UTR TCA 90 bp | GTAAGTCCGTGCCAGGAAGATGATCTATATGTCTTCCCACTGACCCTCCAGTCTGAGCATAGCTGCCCTTaGCCAGGATATCTAATACAG | + |
|
Preference number: 2 (lower is better) Translates to: VSPCQEDDLYVFPLTLQSEHSCP*PGYLIQ Trigger: CTGTATTAGATATCCTGGTCAAGGGCAGCTATGCTC...AGACTGGAGGGTCAGTGGGAAGACATATAGATCATCTTCCTGGCACGGACTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGACTACATCATCCTCCTGCCTCCGCTGAGTGTTGTGATTACACGTGTGCTGAAATTCCCACTCATTaGGCAGACATACTACCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LRLHHPPASAECCDYTCAEIPTH*ADILPQ Trigger: TTGGGGTAGTATGTCTGCTCAATGAGTGGGAATTTC...AGCACACGTGTAATCACAACACTCAGCGGAGGCAGGAGGATGATGTAGTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGACTACATCATCCTCCTGCCTCCGCTGAGTGTTGTGATTACACGTGTGCTGAAGTAGGCCCTCCATaGATACTAGCTTTCTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LRLHHPPASAECCDYTCAEVGPP*ILAFSL Trigger: CAAAGAGAAAGCTAGTATTCATGGAGGGCCTACTTC...AGCACACGTGTAATCACAACACTCAGCGGAGGCAGGAGGATGATGTAGTCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCTGCCCCAGCCTCTCAAGTACTGCGATTACAGGAGTGTTACCACACACCTGGTTAACTCGAGTACTTTaGGGTAAGGTACTATGGACT | + |
|
Preference number: 2 (lower is better) Translates to: SCPSLSSTAITGVLPHTWLTRVL*GKVLWT Trigger: AGTCCATAGTACCTTACCTCAAAGTACTCGAGTTAA...CCAGGTGTGTGGTAACACTCCTGTAATCGCAGTACTTGAGAGGCTGGGGCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAAGCTGGGATCAAATTTGGAATCCTCCTTCCTGCCCCAGCCTCTCAAGTACTCACACATATGTGGAATaGATGAAGGTCAGGACCCTA | + |
|
Preference number: 2 (lower is better) Translates to: PSWDQIWNPPSCPSLSSTHTYVE*MKVRTL Trigger: TAGGGTCCTGACCTTCATGCATTCCACATATGTGTG...AGTACTTGAGAGGCTGGGGCAGGAAGGAGGATTCCAAATTTGATCCCAGCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGACATACTACCCCAATCACCGAGAGATGGTAGGTGGCTAAGTGGAGCTTTGGGTGTAGATTTTTACTaGATGACCCCACTTGGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: ADILPQSPRDGRWLSGALGVDFY*MTPLGV Trigger: GACTCCAAGTGGGGTCATCCAGTAAAAATCTACACC...CAAAGCTCCACTTAGCCACCTACCATCTCTCGGTGATTGGGGTAGTATGTCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTGTTCAGCTCCCACTGTGTCCTTCAAGCAGATAAAAGTGTGTCAGAGAATACCCTTGACAAGTTGTaGGCTGGAGATGTGAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: WLFSSHCVLQADKSVSENTLDKL*AGDVNS Trigger: GCTGTTCACATCTCCAGCTCACAACTTGTCAAGGGT...ATTCTCTGACACACTTTTATCTGCTTGAAGGACACAGTGGGAGCTGAACAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGGTCAAGGAGTACTGGCTGACTGTATACCAATCCAGCCTTTCATCCCCAATGGCTGCTACTGAAACTTaGCCTCAGGAAAAGATCACG | + |
|
Preference number: 2 (lower is better) Translates to: KVKEYWLTVYQSSLSSPMAATET*PQEKIT Trigger: CGTGATCTTTTCCTGAGGCCAAGTTTCAGTAGCAGC...CATTGGGGATGAAAGGCTGGATTGGTATACAGTCAGCCAGTACTCCTTGACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CCA 90 bp | CATCTGTGTGGTTGTCTGTGTAACTCACCCACACATAGGGAAGATAGGGCCCCATATCTAAAGGGAGTCTaGAAAGGATGGGCCTTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: HLCGCLCNSPTHREDRAPYLKGV*KGWAFC Trigger: ACAAAAGGCCCATCCTTTCCAGACTCCCTTTAGATA...TGGGGCCCTATCTTCCCTATGTGTGGGTGAGTTACACAGACAACCACACAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGGTCAAGGAGTACTGGCTGACTGTATACCAATCCAGCCTTTCATCCCCAATGGCCCTGCTTACCAGTTaGCCACACATCAAAAATGAA | + |
|
Preference number: 2 (lower is better) Translates to: KVKEYWLTVYQSSLSSPMALLTS*PHIKNE Trigger: TTCATTTTTGATGTGTGGTCAACTGGTAAGCAGGGC...CATTGGGGATGAAAGGCTGGATTGGTATACAGTCAGCCAGTACTCCTTGACCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR TCA 90 bp | CATCTGTGTGGTTGTCTGTGTAACTCACCCACACATAGGGAAGATAGGGCCCCAGAAAAGATAAATGGTTaGTTGAAGGCTGTGAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: HLCGCLCNSPTHREDRAPEKING*LKAVRM Trigger: CATCCTCACAGCCTTCAATCAACCATTTATCTTTTC...TGGGGCCCTATCTTCCCTATGTGTGGGTGAGTTACACAGACAACCACACAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGGTCAAGGAGTACTGGCTGACTGTATACCAATCCAGCCTTTCATCCCCAATGAGGCTTGTATTTCTTTaGCCACCTCCAAATGGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: KVKEYWLTVYQSSLSSPMRLVFL*PPPNGD Trigger: GTCACCATTTGGAGGTGGCCAAAGAAATACAAGCCT...CATTGGGGATGAAAGGCTGGATTGGTATACAGTCAGCCAGTACTCCTTGACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CAA 90 bp | AGCCAGCAGTCTGGAGTTTCATTATTTTTGAGTGTAGCTCTAGCTTaGCCATGTGTCACTGGGCATGTTACATTCCCTCACCACATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SQQSGVSLFLSVALA*PCVTGHVTFPHHMS Trigger: TGACATGTGGTGAGGGAATGTAACATGCCCAGTGACACATGGCAAAGCTAGAGCTACACTCAAAAATAATGAAACTCCAGACTGCTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTGTTCAGCTCCCACTGTGTCCTTCAAGCAGATAAAAGTGTGTCAGAGAATCACAGAGAACTGGCTTaGTCTTCAGAATGCTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: WLFSSHCVLQADKSVSENHRELA*SSECFQ Trigger: TTGGAAGCATTCTGAAGACCAAGCCAGTTCTCTGTG...ATTCTCTGACACACTTTTATCTGCTTGAAGGACACAGTGGGAGCTGAACAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGTCCGTGCCAGGAAGATGATCTATATGTCTTCCCACTGACCCTCCAGTCTGCGTTTTTATTTATTTaGCTGGCGTGTTATCCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: VSPCQEDDLYVFPLTLQSAFLFI*LACYPS Trigger: TGAAGGATAACACGCCAGGCAAATAAATAAAAACGC...AGACTGGAGGGTCAGTGGGAAGACATATAGATCATCTTCCTGGCACGGACTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTATCTCACTCTGTTACTCAGAACGACATGTGTTTGGAGTCTGAGACTCAACCCCCTGCCCAAGCATaGTGTAGATTTTTACTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: GLSHSVTQNDMCLESETQPPAQA*CRFLLD Trigger: ATCCAGTAAAAATCTACACCATGCTTGGGCAGGGGG...TTGAGTCTCAGACTCCAAACACATGTCGTTCTGAGTAACAGAGTGAGATAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CAA 90 bp | ACTCTGCTGGGTCCATATAGCACACAAGGCAGCGTTTTTATTTATTaGCCTGGCGTGTTATCCTTCAGGTTTATCTCACTCTGTTACTCA | + |
|
Preference number: 2 (lower is better) Translates to: TLLGPYSTQGSVFIY*PGVLSFRFISLCYS Trigger: TGAGTAACAGAGTGAGATAAACCTGAAGGATAACACGCCAGGCAAATAAATAAAAACGCTGCCTTGTGTGCTATATGGACCCAGCAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTTATCTCACTCTGTTACTCAGAACGACATGTGTTTGGAGTCTGAGACTCAAGGGTTGTACAACTTTATaGCAGTCAGTCACAGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VYLTLLLRTTCVWSLRLKGCTTL*QSVTAS Trigger: AGAAGCTGTGACTGACTGTCATAAAGTTGTACAACC...CTTGAGTCTCAGACTCCAAACACATGTCGTTCTGAGTAACAGAGTGAGATAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTTATCTCACTCTGTTACTCAGAACGACATGTGTTTGGAGTCTGAGACTCAAGACCACACATCAAAAATaGAAACTGGTCCTGAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: VYLTLLLRTTCVWSLRLKTTHQK*KLVLSC Trigger: ACAGCTCAGGACCAGTTTTCATTTTTGATGTGTGGT...CTTGAGTCTCAGACTCCAAACACATGTCGTTCTGAGTAACAGAGTGAGATAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTTATCTCACTCTGTTACTCAGAACGACATGTGTTTGGAGTCTGAGACTCAAGGTCTGTTCCAGAAGTTaGGGATACACTGACATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: VYLTLLLRTTCVWSLRLKVCSRS*GYTDIL Trigger: AAGAATGTCAGTGTATCCTCAACTTCTGGAACAGAC...CTTGAGTCTCAGACTCCAAACACATGTCGTTCTGAGTAACAGAGTGAGATAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTTTATCTCACTCTGTTACTCAGAACGACATGTGTTTGGAGTCTGAGACTCAAAGGTTTTGGGGACATTaGGCTCTACAACTTAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: GLSHSVTQNDMCLESETQRFWGH*ALQLNK Trigger: TTTATTAAGTTGTAGAGCTCAATGTCCCCAAAACCT...TTGAGTCTCAGACTCCAAACACATGTCGTTCTGAGTAACAGAGTGAGATAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTATCTCACTCTGTTACTCAGAACGACATGTGTTTGGAGTCTGAGACTCAACAGAGAAATTTAACCTaGAGGGAAAATGCTTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GLSHSVTQNDMCLESETQQRNLT*RENACS Trigger: AGAACAAGCATTTTCCCTCCAGGTTAAATTTCTCTG...TTGAGTCTCAGACTCCAAACACATGTCGTTCTGAGTAACAGAGTGAGATAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTATCTCACTCTGTTACTCAGAACGACATGTGTTTGGAGTCTGAGACTCAATTTGTTTTCCAATTCTaGGGACAGAGTAGAGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: GLSHSVTQNDMCLESETQFVFQF*GQSREK Trigger: CTTTTCTCTACTCTGTCCCCAGAATTGGAAAACAAA...TTGAGTCTCAGACTCCAAACACATGTCGTTCTGAGTAACAGAGTGAGATAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR GCA 72 bp | GGGCCCCACGTCTTGGTGCCAAGCCAGAGTGTGGGCTaGAGCAGGACAGAGGTCTTTAGGCAGAACTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GPHVLVPSQSVG*SRTEVFRQNWH Trigger: ATGCCAGTTCTGCCTAAAGACCTCTGTCCTGCTGCAGCCCACACTCTGGCTTGGCACCAAGACGTGGGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CCA 72 bp | GAAACCTGGGCAGAAATGGAAGCCCGCAGATCCAGGTaGGCAGGTAGGGCTGAAGGTCCAGGGAAGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ETWAEMEARRSR*AGRAEGPGKEE Trigger: CTCCTCCTTCCCTGGACCTTCAGCCCTACCTGCCCACCTGGATCTGCGGGCTTCCATTTCTGCCCAGGTTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR GCA 72 bp | CATTTTAGTCTTGGCTGTCCCAGGGCCCTGGGAGTCTaGCGGAGGCCTTCCTGGCATCTGTGTGGTTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HFSLGCPRALGV*RRPSWHLCGCL Trigger: CAGACAACCACACAGATGCCAGGAAGGCCTCCGGCAGACTCCCAGGGCCCTGGGACAGCCAAGACTAAAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR GCA 72 bp | CTGGGCATTCTCCCAGTATGGCCTCCATACCACACGTaGTCTGAGGCTTCAGCCGCAGTCTCCTCACATGCA | + |
|
Preference number: 3 (lower is better) Translates to: LGILPVWPPYHT*SEASAAVSSHA Trigger: TGCATGTGAGGAGACTGCGGCTGAAGCCTCAGAGCACGTGTGGTATGGAGGCCATACTGGGAGAATGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAGACATACTACCCCAATCACCGAGAGATGGTAGGTGGCTAAGTGGAGCTTTGCCCCACAGCCTCCATTaGCTGGCCAGGCCATCCACT | + |
|
Preference number: 3 (lower is better) Translates to: ADILPQSPRDGRWLSGALPHSLH*LARPST Trigger: AGTGGATGGCCTGGCCAGCAAATGGAGGCTGTGGGG...CAAAGCTCCACTTAGCCACCTACCATCTCTCGGTGATTGGGGTAGTATGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR GCA 72 bp | AGCTGGAGATGTGAACAGCAGACACAAGCTGTCACATaGCCCACAGCCTCCATTTGCTGGCCAGGCCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: SWRCEQQTQAVT*PTASICWPGHP Trigger: TGGATGGCCTGGCCAGCAAATGGAGGCTGTGGGGCATGTGACAGCTTGTGTCTGCTGTTCACATCTCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR GCA 72 bp | GGCCAGACCTTCTGTCAGCAAAAGTATCAGGGGACTTaGAGGACAAGAGGAAGAGCGGGCTGGCTGTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GQTFCQQKYQGT*RTRGRAGWLFS Trigger: GCTGAACAGCCAGCCCGCTCTTCCTCTTGTCCTGCAAGTCCCCTGATACTTTTGCTGACAGAAGGTCTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR GCA 72 bp | CTGCCTCCGCTGAGTGTTGTGATTACACGTGTGCTCTaGGCTCCCTGCTCCAGTTCTGGGAGTCAAGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPPLSVVITRVL*APCSSSGSQVK Trigger: CTTCACTTGACTCCCAGAACTGGAGCAGGGAGCGCAGAGCACACGTGTAATCACAACACTCAGCGGAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CCA 72 bp | CTTCAAGGGCCTGGCACAGTGATAAGGGGACTGAGCTaGAGGGTAGAAACACTCTGGGGTCACAGCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LQGPGTVIRGLS*RVETLWGHSWL Trigger: AAGCCAGCTGTGACCCCAGAGTGTTTCTACCCTCCAGCTCAGTCCCCTTATCACTGTGCCAGGCCCTTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR TCA 72 bp | TCGCCCAACACAATGGCCTGGAGCTCACTCTGTAGCTaGGACTACATCATCCTCCTGCCTCCGCTGAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SPNTMAWSSLCS*DYIILLPPLSV Trigger: AACACTCAGCGGAGGCAGGAGGATGATGTAGTCTCAGCTACAGAGTGAGCTCCAGGCCATTGTGTTGGGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CCA 72 bp | GACAAGGAACAAAGGAACCTGGGCATTCTCCCAGTATaGCCTCCATACCACACGTGCTCTGAGGCTTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: DKEQRNLGILPV*PPYHTCSEASA Trigger: GGCTGAAGCCTCAGAGCACGTGTGGTATGGAGGCCATACTGGGAGAATGCCCAGGTTCCTTTGTTCCTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CAA 90 bp | CATCTGTGTGGTTGTCTGTGTAACTCACCCACACATAGGGAAGATAGGGCCCCAGCACTGAGCTTGGCATaGTGGGATGGAGGTGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: HLCGCLCNSPTHREDRAPALSLA*WDGGGL Trigger: CAGTCCACCTCCATCCCACAATGCCAAGCTCAGTGC...TGGGGCCCTATCTTCCCTATGTGTGGGTGAGTTACACAGACAACCACACAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAGCTGGGATCAAATTTGGAATCCTCCTTCCTGCCCCAGCCTCTCAAGTACGTCTGCCACATGTGGTaGCTGGTGTCCCAGAGTACT | + |
|
Preference number: 3 (lower is better) Translates to: PKLGSNLESSFLPQPLKYVCHMW*LVSQST Trigger: AGTACTCTGGGACACCAGCAACCACATGTGGCAGAC...GTACTTGAGAGGCTGGGGCAGGAAGGAGGATTCCAAATTTGATCCCAGCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
||
| 3UTR GCA 72 bp | TTGGAATCCTCCTTCCTGCCCCAGCCTCTCAAGTACTaGGATTACAGGAGTGTTACCACACACCTGGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LESSFLPQPLKY*DYRSVTTHLAQ Trigger: CTGAGCCAGGTGTGTGGTAACACTCCTGTAATCGCAGTACTTGAGAGGCTGGGGCAGGAAGGAGGATTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
||
| 3UTR CCA 72 bp | CTGAGCTGGAGGGTAGAAACACTCTGGGGTCACAGCTaGCTTTCTCCTGCTGTAACACCTAGCAGCTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSWRVETLWGHS*LSPAVTPSSLK Trigger: CTTCAAGCTGCTAGGTGTTACAGCAGGAGAAAGCCAGCTGTGACCCCAGAGTGTTTCTACCCTCCAGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CCA 72 bp | GTGATAAGGGGACTGAGCTGGAGGGTAGAAACACTCTaGGGTCACAGCTGGCTTTCTCCTGCTGTAACACCT | + |
|
Preference number: 3 (lower is better) Translates to: VIRGLSWRVETL*GHSWLSPAVTP Trigger: AGGTGTTACAGCAGGAGAAAGCCAGCTGTGACCCCAGAGTGTTTCTACCCTCCAGCTCAGTCCCCTTATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CCA 72 bp | GAGTCTCACTGCCAGAGCCTTCCAAGTGCTGTGTTCTaGGACAGAGATCATAGTTGGTCCCCTCCCACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ESHCQSLPSAVF*DRDHSWSPPTS Trigger: AGAAGTGGGAGGGGACCAACTATGATCTCTGTCCCAGAACACAGCACTTGGAAGGCTCTGGCAGTGAGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR TCA 72 bp | CCTTTCCAACCCTTGACAAGTTGTGAGCTGGAGATGTaGACAGCAGACACAAGCTGTCACATGCCCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: PFQPLTSCELEM*TADTSCHMPHS Trigger: GCTGTGGGGCATGTGACAGCTTGTGTCTGCTGTTCACATCTCCAGCTCACAACTTGTCAAGGGTTGGAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR GCA 72 bp | GATGCCACTAGAGAAAAGATGCTAGATTTCCCCTGCTaGCCATGCACTGAGCTTGGCATTGTGGGATGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: DATREKMLDFPC*PCTELGIVGWR Trigger: CCTCCATCCCACAATGCCAAGCTCAGTGCATGGGCAGCAGGGGAAATCTAGCATCTTTTCTCTAGTGGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR GCA 72 bp | GCACAGTGTGGGAAGCAGATGGAACTGACCCTTCTCTaGTCATATCTAAAGGGAGTCTGGAAAGGATGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: AQCGKQMELTLL*SYLKGVWKGWA Trigger: GGCCCATCCTTTCCAGACTCCCTTTAGATATGAGCAGAGAAGGGTCAGTTCCATCTGCTTCCCACACTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR GCA 72 bp | TGCCCAAGCTGGGATCAAATTTGGAATCCTCCTTCCTaGCCCAGCCTCTCAAGTACTGCGATTACAGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: CPSWDQIWNPPS*PSLSSTAITGV Trigger: CACTCCTGTAATCGCAGTACTTGAGAGGCTGGGGCAGGAAGGAGGATTCCAAATTTGATCCCAGCTTGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
||
| 3UTR CCA 72 bp | TCTGAGGCTTCAGCCGCAGTCTCCTCACATGCAAAATaGGAGACCTGGTGTGGACTCTATCTGGTCTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SEASAAVSSHAK*ETWCGLYLVSF Trigger: GAAAGAGACCAGATAGAGTCCACACCAGGTCTCCCATTTTGCATGTGAGGAGACTGCGGCTGAAGCCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCCAAACAGCCCACTCAGGATACAGTCAGCCCACCTACCATAGCACACATCCCACAGAGAACTGGCTaGGTCTTCAGAATGCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SAKQPTQDTVSPPTIAHIPQRTG*VFRMLP Trigger: TGGAAGCATTCTGAAGACCAAGCCAGTTCTCTGTGG...GATGTGTGCTATGGTAGGTGGGCTGACTGTATCCTGAGTGGGCTGTTTGGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAGACATACTACCCCAATCACCGAGAGATGGTAGGTGGCTAAGTGGAGCTTTGGGCCAGGCCATCCACTaGTCATTTTCCATTATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ADILPQSPRDGRWLSGALGQAIH*SFSIIW Trigger: CCAGATAATGGAAAATGACAAGTGGATGGCCTGGCC...CAAAGCTCCACTTAGCCACCTACCATCTCTCGGTGATTGGGGTAGTATGTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGTCCGTGCCAGGAAGATGATCTATATGTCTTCCCACTGACCCTCCAGTCTAGTGTAGCTCTAGCTTaGCCATGTGTCACTGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VSPCQEDDLYVFPLTLQSSVALA*PCVTGH Trigger: ATGCCCAGTGACACATGGCAAAGCTAGAGCTACACT...AGACTGGAGGGTCAGTGGGAAGACATATAGATCATCTTCCTGGCACGGACTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CAA 90 bp | CATCTGTGTGGTTGTCTGTGTAACTCACCCACACATAGGGAAGATAGGGCCCCACTTGTCTTTTGCAGTTaGCTCAGATGGTGGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: HLCGCLCNSPTHREDRAPLVFCS*LRWWPS Trigger: AGATGGCCACCATCTGAGCAAACTGCAAAAGACAAG...TGGGGCCCTATCTTCCCTATGTGTGGGTGAGTTACACAGACAACCACACAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR TCA 72 bp | GTCCGTGCCAGGAAGATGATCTATATGTCTTCCCACTaGCCCTCCAGTCTTCCTGAAGAACAGCCTCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: VRARKMIYMSSH*PSSLPEEQPHS Trigger: TGAATGAGGCTGTTCTTCAGGAAGACTGGAGGGTCAGTGGGAAGACATATAGATCATCTTCCTGGCACGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CCA 72 bp | ACAGCAGGTGGTGATGGTCAAAGGACCACAGAGAACTaGCTTGGTCTTCAGAATGCTTCCAAGGATGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TAGGDGQRTTEN*LGLQNASKDVV Trigger: AACCACATCCTTGGAAGCATTCTGAAGACCAAGCCAGTTCTCTGTGGTCCTTTGACCATCACCACCTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CCA 72 bp | CTTCCAAGTGCTGTGTTCTGGGACAGAGATCATAGTTaGTCCCCTCCCACTTCTTCCTCCAAAAGAGATCTC | + |
|
Preference number: 3 (lower is better) Translates to: LPSAVFWDRDHS*SPPTSSSKRDL Trigger: GAGATCTCTTTTGGAGGAAGAAGTGGGAGGGGACCAACTATGATCTCTGTCCCAGAACACAGCACTTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CCA 72 bp | CAAGCATGGTGTAGATTTTTACTGGATGACCCCACTTaGAGTCTCACTGCCAGAGCCTTCCAAGTGCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QAWCRFLLDDPT*SLTARAFQVLC Trigger: ACACAGCACTTGGAAGGCTCTGGCAGTGAGACTCCAAGTGGGGTCATCCAGTAAAAATCTACACCATGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CCA 72 bp | GCAGACATACTACCCCAATCACCGAGAGATGGTAGGTaGCTAAGTGGAGCTTTGACTCTGCTGTTTCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: ADILPQSPRDGR*LSGALTLLFLP Trigger: AGGTAGAAACAGCAGAGTCAAAGCTCCACTTAGCCACCTACCATCTCTCGGTGATTGGGGTAGTATGTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR TCA 72 bp | TCATTTTCCATTATCTGGCAGCAACACAGCAGGTGGTaGTGGTCAAAGGACCACAGAGAACTGGCTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SFSIIWQQHSRW*WSKDHRELAWS Trigger: AGACCAAGCCAGTTCTCTGTGGTCCTTTGACCATCACCACCTGCTGTGTTGCTGCCAGATAATGGAAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR TCA 72 bp | AGGGTCAGGTTGGATAGTCAGAGCAAACTGAAGAATTaGTGGATGAGAAGGGCAATGAAGGATGCGGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: RVRLDSQSKLKN*WMRRAMKDAVD Trigger: GTCCACCGCATCCTTCATTGCCCTTCTCATCCATCAATTCTTCAGTTTGCTCTGACTATCCAACCTGACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CCA 72 bp | GAACTGACCCTTCTCTGCTCATATCTAAAGGGAGTCTaGAAAGGATGGGCCTTTTGTCCAAAGGCTACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ELTLLCSYLKGV*KGWAFCPKATV Trigger: AACAGTAGCCTTTGGACAAAAGGCCCATCCTTTCCAGACTCCCTTTAGATATGAGCAGAGAAGGGTCAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTTATCTCACTCTGTTACTCAGAACGACATGTGTTTGGAGTCTGAGACTCAAGAAAGTATCAGGGGACTaGCAGGACAAGAGGAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: VYLTLLLRTTCVWSLRLKKVSGD*QDKRKS Trigger: GCTCTTCCTCTTGTCCTGCAAGTCCCCTGATACTTT...CTTGAGTCTCAGACTCCAAACACATGTCGTTCTGAGTAACAGAGTGAGATAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR TCA 72 bp | AGTCCTTATAAATCCAGTAAGTCCGTGCCAGGAAGATaGTCTATATGTCTTCCCACTGACCCTCCAGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SPYKSSKSVPGR*SICLPTDPPVF Trigger: GAAGACTGGAGGGTCAGTGGGAAGACATATAGATCATCTTCCTGGCACGGACTTACTGGATTTATAAGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR GCA 72 bp | TCCCCAACTAAAGCGTTCGTCCTTGAGGAATCTGCATaGGCCTTTCCTTTCTCTGTATCATCAGTGTGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SPTKAFVLEESA*AFPFSVSSVCL Trigger: TAAACACACTGATGATACAGAGAAAGGAAAGGCGCATGCAGATTCCTCAAGGACGAACGCTTTAGTTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CCA 72 bp | CTTCTCTGCTCATATCTAAAGGGAGTCTGGAAAGGATaGGCCTTTTGTCCAAAGGCTACTGTTGAGTTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLCSYLKGVWKG*AFCPKATVELR Trigger: CCTTAACTCAACAGTAGCCTTTGGACAAAAGGCCCATCCTTTCCAGACTCCCTTTAGATATGAGCAGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGTCCGTGCCAGGAAGATGATCTATATGTCTTCCCACTGACCCTCCAGTCTGGAGTTTCATTATTTTaGAGTGTAGCTCTAGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: VSPCQEDDLYVFPLTLQSGVSLF*SVALAL Trigger: CAAAGCTAGAGCTACACTCAAAAATAATGAAACTCC...AGACTGGAGGGTCAGTGGGAAGACATATAGATCATCTTCCTGGCACGGACTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR TCA 72 bp | ACTAGCATCTTGTATTATCTCCCTCTCAGCTGCTACTaGAACTTGGCCTCAGGAAAAGATCACGATGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TSILYYLPLSCY*NLASGKDHDEE Trigger: TTCCTCATCGTGATCTTTTCCTGAGGCCAAGTTTCAGTAGCAGCTGAGAGGGAGATAATACAAGATGCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR TCA 72 bp | AATTTCCCAACCATGCCAAGTGAGCATAGCTGCCCTTaGCCAGGATATCTAATACAGTGTACACACAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: NFPTMPSEHSCP*PGYLIQCTHNS Trigger: GGAATTGTGTGTACACTGTATTAGATATCCTGGTCAAGGGCAGCTATGCTCACTTGGCATGGTTGGGAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR TCA 72 bp | TGGTTCTTTGTTTTTCAAAGGTCAAGGAGTACTGGCTaGCTGTATACCAATCCAGCCTTTCATCCCCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: WFFVFQRSRSTG*LYTNPAFHPQC Trigger: GCATTGGGGATGAAAGGCTGGATTGGTATACAGTCAGCCAGTACTCCTTGACCTTTGAAAAACAAAGAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR GCA 72 bp | CAAGTGAAGTCAGTCCTTATAAATCCAGTAAGTCCGTaGCAGGAAGATGATCTATATGTCTTCCCACTGACC | + |
|
Preference number: 3 (lower is better) Translates to: QVKSVLINPVSP*QEDDLYVFPLT Trigger: GGTCAGTGGGAAGACATATAGATCATCTTCCTGGCACGGACTTACTGGATTTATAAGGACTGACTTCACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR TCA 72 bp | GATGGCCCTGCTTACCAGTTGACCACACATCAAAAATaGAAACTGGTCCTGAGCTGTCAAAAAGAACTGATA | + |
|
Preference number: 3 (lower is better) Translates to: DGPAYQLTTHQK*KLVLSCQKELI Trigger: TATCAGTTCTTTTTGACAGCTCAGGACCAGTTTTCATTTTTGATGTGTGGTCAACTGGTAAGCAGGGCCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR TCA 72 bp | AAATGGTTGATTGAAGGCTGTGAGGATGTTTCATATTaGGCAACCTGGAGGTTACTTTGCATCTTCCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KWLIEGCEDVSY*ATWRLLCIFLS Trigger: GGAGAGGAAGATGCAAAGTAACCTCCAGGTTGCTCAATATGAAACATCCTCACAGCCTTCAATCAACCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR GCA 72 bp | ACTGAAGGCTGTAGCACCCAAAGGCCCATGTTTCCCTaGATTTTAATAGAATCTTTACCAAAAACTGACCGT | + |
|
Preference number: 3 (lower is better) Translates to: TEGCSTQRPMFP*ILIESLPKTDR Trigger: ACGGTCAGTTTTTGGTAAAGATTCTATTAAAATGCAGGGAAACATGGGCCTTTGGGTGCTACAGCCTTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CCA 72 bp | TTGCTTCTGTCATTCTTCACTAGGCTTGTATTTCTTTaGCCACCTCCAAATGGTGACAAGGCAGAGTTAATC | + |
|
Preference number: 3 (lower is better) Translates to: LLLSFFTRLVFL*PPPNGDKAELI Trigger: GATTAACTCTGCCTTGTCACCATTTGGAGGTGGCCAAAGAAATACAAGCCTAGTGAAGAATGACAGAAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR TCA 72 bp | TCACTCTGTTACTCAGAACGACATGTGTTTGGAGTCTaGGACTCAAGTTTCAATCCTTGCTTCACATCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLCYSERHVFGV*DSSFNPCFTSL Trigger: AAGAGATGTGAAGCAAGGATTGAAACTTGAGTCTCAGACTCCAAACACATGTCGTTCTGAGTAACAGAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR TCA 72 bp | ATTAGGTGGAAATCATTAACAGAAGTAGGCCCTCCATaGATACTAGCTTTCTCTTTGCCTTCCCCAACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: IRWKSLTEVGPP*ILAFSLPSPTK Trigger: TTTAGTTGGGGAAGGCAAAGAGAAAGCTAGTATTCATGGAGGGCCTACTTCTGTTAATGATTTCCACCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR TCA 72 bp | TTGATGTTTTGTCTGTTCCAGAAGTTGAGGATACACTaGCATTCTTTCTTGTCTTTTGCAGTTTGCTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LMFCLFQKLRIH*HSFLSFAVCSD Trigger: ATCTGAGCAAACTGCAAAAGACAAGAAAGAATGTCAGTGTATCCTCAACTTCTGGAACAGACAAAACATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR GCA 90 bp | GCAGACATACTACCCCAATCACCGAGAGATGGTAGGTGGCTAAGTGGAGCTTTGGAGTGGCAGAAGTGCTaGTGGGGGTGCGCAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ADILPQSPRDGRWLSGALEWQKC*WGCAGA Trigger: TGCGCCTGCGCACCCCCAGCAGCACTTCTGCCACTC...CAAAGCTCCACTTAGCCACCTACCATCTCTCGGTGATTGGGGTAGTATGTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCTTTGCCTTCCCCAACTAAAGCGTTCGTCCTTGAGGAATCTGCATGCGGCCGAGTGGCAGAAGTaGTGCTGGGGGTGCGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLCLPQLKRSSLRNLHAAEWQK*CWGCAG Trigger: GCCTGCGCACCCCCAGCAGCACTTCTGCCACTCGGC...CGCATGCAGATTCCTCAAGGACGAACGCTTTAGTTGGGGAAGGCAAAGAGAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CAA 72 bp | GGGCCAGACCTTCTGTCAGCAAAAGTATCAGGGGACTaGCAGGACAAGAGGAAGAGCGGGCTGGCTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPDLLSAKVSGD*QDKRKSGLAVQ Trigger: CTGAACAGCCAGCCCGCTCTTCCTCTTGTCCTGCAAGTCCCCTGATACTTTTGCTGACAGAAGGTCTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGCCCCAGCCTCTCAAGTACTGCGATTACAGGAGTGTTACCACACACCTTTCAGGCTCTCCCTCTaGACCAAGGACAGGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPAPASQVLRLQECYHTPFRLSL*TKDRSS Trigger: GGAGGACCTGTCCTTGGTGCAGAGGGAGAGCCTGAA...AGGTGTGTGGTAACACTCCTGTAATCGCAGTACTTGAGAGGCTGGGGCAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
||
| 3UTR CAA 72 bp | GCCCCACAGCCTCCATTTGCTGGCCAGGCCATCCACTaGTCATTTTCCATTATCTGGCAGCAACACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: APQPPFAGQAIH*SFSIIWQQHSR Trigger: CCTGCTGTGTTGCTGCCAGATAATGGAAAATGACAAGTGGATGGCCTGGCCAGCAAATGGAGGCTGTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR GCA 90 bp | TATCTTACTATGTTGCCCAAGCTGGGATCAAATTTGGAATCCTCCTTCCTGCCCAAGTGCTGCTGGGGGTaGGCAGGCGCACAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: YLTMLPKLGSNLESSFLPKCCWG*AGAQLH Trigger: GTGCAGCTGTGCGCCTGCGCACCCCCAGCAGCACTT...GGGCAGGAAGGAGGATTCCAAATTTGATCCCAGCTTGGGCAACATAGTAAGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
||
| 3UTR CAA 72 bp | GCAGACACAAGCTGTCACATGCCCCACAGCCTCCATTaGCTGGCCAGGCCATCCACTTGTCATTTTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: ADTSCHMPHSLH*LARPSTCHFPL Trigger: TAATGGAAAATGACAAGTGGATGGCCTGGCCAGCAAATGGAGGCTGTGGGGCATGTGACAGCTTGTGTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR TCA 90 bp | TCAGCCAAACAGCCCACTCAGGATACAGTCAGCCCACCTACCATAGCACACATCCTGCATAGCAAGTGGTaGTTTGGCAGCCACAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAKQPTQDTVSPPTIAHILHSKW*FGSHSS Trigger: AGAACTGTGGCTGCCAAATCACCACTTGCTATGCAG...GATGTGTGCTATGGTAGGTGGGCTGACTGTATCCTGAGTGGGCTGTTTGGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR GCA 90 bp | GGTTTATCTCACTCTGTTACTCAGAACGACATGTGTTTGGAGTCTGAGACTCAAAAGTGCTGCTGGGGGTaGGCAGGCGCACAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLSHSVTQNDMCLESETQKCCWG*AGAQLH Trigger: GTGCAGCTGTGCGCCTGCGCACCCCCAGCAGCACTT...TTGAGTCTCAGACTCCAAACACATGTCGTTCTGAGTAACAGAGTGAGATAAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR GCA 90 bp | TCAAGTACTGCGATTACAGGAGTGTTACCACACACCTGGCTCAGATTTTCTTTAGAGTGGCAGAAGTGCTaGTGGGGGTGCGCAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTAITGVLPHTWLRFSLEWQKC*WGCAGA Trigger: TGCGCCTGCGCACCCCCAGCAGCACTTCTGCCACTC...TAAAGAAAATCTGAGCCAGGTGTGTGGTAACACTCCTGTAATCGCAGTACTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTCAAGGAGTACTGGCTGACTGTATACCAATCCAGCCTTTCATCCCCAATGTTCAGGCTCTCCCTCTaGACCAAGGACAGGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVKEYWLTVYQSSLSSPMFRLSL*TKDRSS Trigger: GGAGGACCTGTCCTTGGTGCAGAGGGAGAGCCTGAA...CATTGGGGATGAAAGGCTGGATTGGTATACAGTCAGCCAGTACTCCTTGACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR TCA 90 bp | AAGACACTGGGAGGGGAGAAATTCCCACTCATTGAGCAGACATACTACCCCAATACACTCATTGGGGGCTaGGATGGTACATGGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KTLGGEKFPLIEQTYYPNTLIGG*DGTWHC Trigger: GCAGTGCCATGTACCATCTCAGCCCCCAATGAGTGT...ATTGGGGTAGTATGTCTGCTCAATGAGTGGGAATTTCTCCCCTCCCAGTGTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR GCA 90 bp | AAGACACTGGGAGGGGAGAAATTCCCACTCATTGAGCAGACATACTACCCCAATGGCCTCGGTACCAGCTaGAGATGCCATCAACATGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTLGGEKFPLIEQTYYPNGLGTS*RCHQHA Trigger: AGCATGTTGATGGCATCTGCAGCTGGTACCGAGGCC...ATTGGGGTAGTATGTCTGCTCAATGAGTGGGAATTTCTCCCCTCCCAGTGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGCTGGGATCAAATTTGGAATCCTCCTTCCTGCCCCAGCCTCTCAAGTACTTACCGGATCAGTTTTTaGGTGTCAGCAGGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSWDQIWNPPSCPSLSSTYRISF*VSAGSL Trigger: CAAAGACCCTGCTGACACTCAAAAACTGATCCGGTA...AGTACTTGAGAGGCTGGGGCAGGAAGGAGGATTCCAAATTTGATCCCAGCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
||
| CDS-3UTR CCA 90 bp | CATCTGTGTGGTTGTCTGTGTAACTCACCCACACATAGGGAAGATAGGGCCCCATCTCACTGGATATTTTaGCCCGTATCACTAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HLCGCLCNSPTHREDRAPSHWIF*PVSLEP Trigger: CGGCTCTAGTGATACGGGCCAAAATATCCAGTGAGA...TGGGGCCCTATCTTCCCTATGTGTGGGTGAGTTACACAGACAACCACACAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR TCA 90 bp | TCAGCCAAACAGCCCACTCAGGATACAGTCAGCCCACCTACCATAGCACACATCAGACTTTTCCATCACTaGGAATCTGGCCAGTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAKQPTQDTVSPPTIAHIRLFHH*ESGQSK Trigger: TTTTGACTGGCCAGATTCTCAGTGATGGAAAAGTCT...GATGTGTGCTATGGTAGGTGGGCTGACTGTATCCTGAGTGGGCTGTTTGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| 3UTR CAA 72 bp | CCCTCCCACTTCTTCCTCCAAAAGAGATCTCCATCGTaGTATTTAAATCCAGCTCCTTCTCCCAGCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSHFFLQKRSPS*YLNPAPSPSTA Trigger: TGCTGTGCTGGGAGAAGGAGCTGGATTTAAATACAACGATGGAGATCTCTTTTGGAGGAAGAAGTGGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR TCA 90 bp | TCAGCCAAACAGCCCACTCAGGATACAGTCAGCCCACCTACCATAGCACACATCAAAAGATACTGCTTGTaGCTGTTGGTTTCTAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SAKQPTQDTVSPPTIAHIKRYCL*LLVSSF Trigger: GAAGCTAGAAACCAACAGTCACAAGCAGTATCTTTT...GATGTGTGCTATGGTAGGTGGGCTGACTGTATCCTGAGTGGGCTGTTTGGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR GCA 90 bp | AAGGTCAAGGAGTACTGGCTGACTGTATACCAATCCAGCCTTTCATCCCCAATGGATGGTACATGGCACTaGATAGCAAGTGGTGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVKEYWLTVYQSSLSSPMDGTWH*IASGDL Trigger: CAAATCACCACTTGCTATGCAGTGCCATGTACCATC...CATTGGGGATGAAAGGCTGGATTGGTATACAGTCAGCCAGTACTCCTTGACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR GCA 90 bp | GCTTGTTCTAGTATGTACGTTTTCTTTTCCAGAGATGTATGCCAACTGGGCCAGGGTACCAGCTGCAGATaGCATCAACATGCTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: ACSSMYVFFSRDVCQLGQGTSCR*HQHASC Trigger: GCATGAAGCATGTTGATGGCATCTGCAGCTGGTACC...CTGGCCCAGTTGGCATACATCTCTGGAAAAGAAAACGTACATACTAGAACAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR CCA 90 bp | GTATCTTACTATGTTGCCCAAGCTGGGATCAAATTTGGAATCCTCCTTCCTGCCTCTCACTGGATATTTTaGCCCGTATCACTAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSYYVAQAGIKFGILLPASHWIF*PVSLEP Trigger: CGGCTCTAGTGATACGGGCCAAAATATCCAGTGAGA...GGCAGGAAGGAGGATTCCAAATTTGATCCCAGCTTGGGCAACATAGTAAGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
||
| 3UTR CAA 72 bp | CACAGCTGGCTTTCTCCTGCTGTAACACCTAGCAGCTaGAAGAAGCTTGAAGCAAGTGAAAGGTGTATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSWLSPAVTPSS*KKLEASERCIP Trigger: TGGAATACACCTTTCACTTGCTTCAAGCTTCTTCAAGCTGCTAGGTGTTACAGCAGGAGAAAGCCAGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR TCA 90 bp | GCTTGTTCTAGTATGTACGTTTTCTTTTCCAGAGATGTATGCCAACTGGGCCAGTACCGGATCAGTTTTTaGGTGTCAGCAGGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ACSSMYVFFSRDVCQLGQYRISF*VSAGSL Trigger: CAAAGACCCTGCTGACACTCAAAAACTGATCCGGTA...CTGGCCCAGTTGGCATACATCTCTGGAAAAGAAAACGTACATACTAGAACAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
||
| CDS-3UTR GCA 90 bp | GCTTGTTCTAGTATGTACGTTTTCTTTTCCAGAGATGTATGCCAACTGGGCCAGCATCAACATGCTTCATaGAGACATAGTGCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ACSSMYVFFSRDVCQLGQHQHAS*RHSAGP Trigger: AGGCCCAGCACTATGTCTGCATGAAGCATGTTGATG...CTGGCCCAGTTGGCATACATCTCTGGAAAAGAAAACGTACATACTAGAACAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| CDS-3UTR CCA 90 bp | GAGTACTTTGAGGTAAGGTACTATGGACTCTTCTTTCCCACCCCCAACTTCCACGAGGGAAGAGTCAAATaGCGTGTAGACATACTGAAT | + |
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Preference number: 4 (lower is better) Translates to: EYFEVRYYGLFFPTPNFHEGRVK*RVDILN Trigger: ATTCAGTATGTCTACACGCCATTTGACTCTTCCCTC...GTGGAAGTTGGGGGTGGGAAAGAAGAGTCCATAGTACCTTACCTCAAAGTACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
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| CDS-3UTR CCA 90 bp | AAGTACTGCGATTACAGGAGTGTTACCACACACCTGGCTCAGATTTTCTTTAAAGGACATCTCCTTACTTaGCAGCCACAGTTCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: KYCDYRSVTTHLAQIFFKGHLLT*QPQFWW Trigger: CCACCAGAACTGTGGCTGCCAAGTAAGGAGATGTCC...TTTAAAGAAAATCTGAGCCAGGTGTGTGGTAACACTCCTGTAATCGCAGTACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
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| CDS-3UTR CCA 90 bp | AAAGATCACGATGAGGAAGATCGTGACGAGGGCACCTTTGTTGTTTCACCTTTTGAGGGAAGAGTCAAATaGCGTGTAGACATACTGAAT | + |
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Preference number: 4 (lower is better) Translates to: KDHDEEDRDEGTFVVSPFEGRVK*RVDILN Trigger: ATTCAGTATGTCTACACGCCATTTGACTCTTCCCTC...AAAAGGTGAAACAACAAAGGTGCCCTCGTCACGATCTTCCTCATCGTGATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| CDS-3UTR CCA 90 bp | CTCAAGTACTGCGATTACAGGAGTGTTACCACACACCTGGCTCAGATTTTCTTTAAGCAACCTCAGAAATaGACATCTCCTTACTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LKYCDYRSVTTHLAQIFFKQPQK*TSPYLA Trigger: TGCCAAGTAAGGAGATGTCCATTTCTGAGGTTGCTT...AAAGAAAATCTGAGCCAGGTGTGTGGTAACACTCCTGTAATCGCAGTACTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
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| 3UTR CAA 72 bp | GATAAAAGCTCTTGCTTCTGTCATTCTTCACTAGGCTaGTATTTCTTTGGCCACCTCCAAATGGTGACAAGG | + |
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Preference number: 4 (lower is better) Translates to: DKSSCFCHSSLG*YFFGHLQMVTR Trigger: CCTTGTCACCATTTGGAGGTGGCCAAAGAAATACAAGCCTAGTGAAGAATGACAGAAGCAAGAGCTTTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR CAA 72 bp | GGTCCATATAGCACACAAGGCAGCGTTTTTATTTATTaGCCTGGCGTGTTATCCTTCAGGTTTATCTCACTC | + |
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Preference number: 4 (lower is better) Translates to: GPYSTQGSVFIY*PGVLSFRFISL Trigger: GAGTGAGATAAACCTGAAGGATAACACGCCAGGCAAATAAATAAAAACGCTGCCTTGTGTGCTATATGGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| 3UTR CAA 72 bp | GGTTTATCTCACTCTGTTACTCAGAACGACATGTGTTaGGAGTCTGAGACTCAAGTTTCAATCCTTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GLSHSVTQNDMC*ESETQVSILAS Trigger: TGAAGCAAGGATTGAAACTTGAGTCTCAGACTCCAAACACATGTCGTTCTGAGTAACAGAGTGAGATAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| CDS-3UTR TCA 90 bp | AAGTACTGCGATTACAGGAGTGTTACCACACACCTGGCTCAGATTTTCTTTAAAAAAAGATACTGCTTGTaGCTGTTGGTTTCTAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: KYCDYRSVTTHLAQIFFKKRYCL*LLVSSF Trigger: GAAGCTAGAAACCAACAGTCACAAGCAGTATCTTTT...TTTAAAGAAAATCTGAGCCAGGTGTGTGGTAACACTCCTGTAATCGCAGTACTT 40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
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| 3UTR CAA 72 bp | AGAATCTGTAGAATTGGAAAAGTAGATACTAAAGGATaGAATGAAGGATCTGTCAGTGAACCTGGCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: RICRIGKVDTKG*NEGSVSEPGWR Trigger: TCTCCAGCCAGGTTCACTGACAGATCCTTCATTCAATCCTTTAGTATCTACTTTTCCAATTCTACAGATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| CDS GCA 90 bp | CGTACTCCTTCCGGAGGTGTAGGTGGCCTCGGTACCAGCTGCAGATaGCATCAACATGCTTCATGCAGACATAGTGCTGGGCCTGGTACC | + |
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Preference number: 5 (lower is better) Translates to: RTPSGGVGGLGTSCR*HQHASCRHSAGPGT Trigger: GGTACCAGGCCCAGCACTATGTCTGCATGAAGCATGTTGATGGCATCTGCAGCTGGTACCGAGGCCACCTACACCTCCGGAAGGAGTACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| CDS TCA 90 bp | CTTCCGTTCCAGCAGCCAGTCCGTCCAGAGACACTCATTGGGGGCTaGGATGGTACATGGCACTGCATAGCAAGTGGTGATTTGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LPFQQPVRPETLIGG*DGTWHCIASGDLAA Trigger: GGCTGCCAAATCACCACTTGCTATGCAGTGCCATGTACCATCTCAGCCCCCAATGAGTGTCTCTGGACGGACTGGCTGCTGGAACGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| CDS GCA 90 bp | GTAGGTGGCCTCGGTACCAGCTGCAGATGCCATCAACATGCTTCATaGAGACATAGTGCTGGGCCTGGTACCCATAGAGCTTCCGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: VGGLGTSCRCHQHAS*RHSAGPGTHRASVP Trigger: TGGAACGGAAGCTCTATGGGTACCAGGCCCAGCACTATGTCTGCATGAAGCATGTTGATGGCATCTGCAGCTGGTACCGAGGCCACCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| CDS-3UTR CAA 90 bp | AAGGTCAAGGAGTACTGGCTGACTGTATACCAATCCAGCCTTTCATCCCCAATGGTCCAGAGACACTCATaGGGGGCTGAGATGGTACAT | + |
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Preference number: 5 (lower is better) Translates to: KVKEYWLTVYQSSLSSPMVQRHS*GAEMVH Trigger: ATGTACCATCTCAGCCCCCAATGAGTGTCTCTGGAC...CATTGGGGATGAAAGGCTGGATTGGTATACAGTCAGCCAGTACTCCTTGACCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| CDS-3UTR CAA 90 bp | CATCTGTGTGGTTGTCTGTGTAACTCACCCACACATAGGGAAGATAGGGCCCCAATACCGGATCAGTTTTaGAGTGTCAGCAGGGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: HLCGCLCNSPTHREDRAPIPDQF*SVSRVF Trigger: AAAGACCCTGCTGACACTCAAAAACTGATCCGGTAT...TGGGGCCCTATCTTCCCTATGTGTGGGTGAGTTACACAGACAACCACACAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| CDS-3UTR CAA 90 bp | CCAAGCTGGGATCAAATTTGGAATCCTCCTTCCTGCCCCAGCCTCTCAAGTACTATACCGGATCAGTTTTaGAGTGTCAGCAGGGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: PSWDQIWNPPSCPSLSSTIPDQF*SVSRVF Trigger: AAAGACCCTGCTGACACTCAAAAACTGATCCGGTAT...AGTACTTGAGAGGCTGGGGCAGGAAGGAGGATTCCAAATTTGATCCCAGCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
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| CDS-3UTR CAA 90 bp | CTCAAGTACTGCGATTACAGGAGTGTTACCACACACCTGGCTCAGATTTTCTTTTGGACATCTCCTTACTaGGCAGCCACAGTTCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: LKYCDYRSVTTHLAQIFFWTSPY*AATVLV Trigger: CACCAGAACTGTGGCTGCCAAGTAAGGAGATGTCCA...AAAGAAAATCTGAGCCAGGTGTGTGGTAACACTCCTGTAATCGCAGTACTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
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| CDS TCA 90 bp | ACTTTTCCATCACTGAGAATCTGGCCAGTCAAAAGATACTGCTTGTaGCTGTTGGTTTCTAGCTTCACACCACAGAGGGAAGAGTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: TFPSLRIWPVKRYCL*LLVSSFTPQREESN Trigger: ATTTGACTCTTCCCTCTGTGGTGTGAAGCTAGAAACCAACAGTCACAAGCAGTATCTTTTGACTGGCCAGATTCTCAGTGATGGAAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032462.9 ENSMUST00000205131.2 |
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| CDS GCA 72 bp | ATCACTAGAGCCGAGTGGCAGAAGTGCTGCTGGGGGTaGGCAGGCGCACAGCTGCACGCCTCACCCCGTCCA | + |
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Preference number: 6 (lower is better) Translates to: ITRAEWQKCCWG*AGAQLHASPRP Trigger: TGGACGGGGTGAGGCGTGCAGCTGTGCGCCTGCGCACCCCCAGCAGCACTTCTGCCACTCGGCTCTAGTGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032462.9 ENSMUST00000205131.2 |
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| CDS GCA 72 bp | TTGGCCCGTATCACTAGAGCCGAGTGGCAGAAGTGCTaGTGGGGGTGCGCAGGCGCACAGCTGCACGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LARITRAEWQKC*WGCAGAQLHAS Trigger: TGAGGCGTGCAGCTGTGCGCCTGCGCACCCCCAGCAGCACTTCTGCCACTCGGCTCTAGTGATACGGGCCAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032462.9 ENSMUST00000205131.2 |
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| CDS GCA 72 bp | ATTTTGGCCCGTATCACTAGAGCCGAGTGGCAGAAGTaGTGCTGGGGGTGCGCAGGCGCACAGCTGCACGCC | + |
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Preference number: 6 (lower is better) Translates to: ILARITRAEWQK*CWGCAGAQLHA Trigger: GGCGTGCAGCTGTGCGCCTGCGCACCCCCAGCAGCACTTCTGCCACTCGGCTCTAGTGATACGGGCCAAAAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032462.9 ENSMUST00000205131.2 |
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| CDS CCA 72 bp | TCACTGGATATTTTGGCCCGTATCACTAGAGCCGAGTaGCAGAAGTGCTGCTGGGGGTGCGCAGGCGCACAG | + |
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Preference number: 6 (lower is better) Translates to: SLDILARITRAE*QKCCWGCAGAQ Trigger: CTGTGCGCCTGCGCACCCCCAGCAGCACTTCTGCCACTCGGCTCTAGTGATACGGGCCAAAATATCCAGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032462.9 ENSMUST00000205131.2 |
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| CDS GCA 72 bp | TCCGGAGGTGTAGGTGGCCTCGGTACCAGCTGCAGATaGCATCAACATGCTTCATGCAGACATAGTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SGGVGGLGTSCR*HQHASCRHSAG Trigger: CCCAGCACTATGTCTGCATGAAGCATGTTGATGGCATCTGCAGCTGGTACCGAGGCCACCTACACCTCCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| CDS TCA 72 bp | CAGCAGCCAGTCCGTCCAGAGACACTCATTGGGGGCTaGGATGGTACATGGCACTGCATAGCAAGTGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: QQPVRPETLIGG*DGTWHCIASGD Trigger: ATCACCACTTGCTATGCAGTGCCATGTACCATCTCAGCCCCCAATGAGTGTCTCTGGACGGACTGGCTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| CDS CCA 72 bp | TGGATGATGTCAACGTACTCCTTCCGGAGGTGTAGGTaGCCTCGGTACCAGCTGCAGATGCCATCAACATGC | + |
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Preference number: 6 (lower is better) Translates to: WMMSTYSFRRCR*PRYQLQMPSTC Trigger: GCATGTTGATGGCATCTGCAGCTGGTACCGAGGCCACCTACACCTCCGGAAGGAGTACGTTGACATCATCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| CDS GCA 72 bp | CTCGGTACCAGCTGCAGATGCCATCAACATGCTTCATaGAGACATAGTGCTGGGCCTGGTACCCATAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LGTSCRCHQHAS*RHSAGPGTHRA Trigger: AGCTCTATGGGTACCAGGCCCAGCACTATGTCTGCATGAAGCATGTTGATGGCATCTGCAGCTGGTACCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032462.9 |
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| CDS CCA 72 bp | CTAACCTTGTCCCTCACCCACAAGCAACCTCAGAAATaGACATCTCCTTACTTGGCAGCCACAGTTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LTLSLTHKQPQK*TSPYLAATVLV Trigger: CACCAGAACTGTGGCTGCCAAGTAAGGAGATGTCCATTTCTGAGGTTGCTTGTGGGTGAGGGACAAGGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205131.2 |
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| CDS TCA 72 bp | TCACTGAGAATCTGGCCAGTCAAAAGATACTGCTTGTaGCTGTTGGTTTCTAGCTTCACACCACAGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SLRIWPVKRYCL*LLVSSFTPQRE Trigger: TTCCCTCTGTGGTGTGAAGCTAGAAACCAACAGTCACAAGCAGTATCTTTTGACTGGCCAGATTCTCAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032462.9 ENSMUST00000205131.2 |
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| CDS CCA 72 bp | GAATCTGGCCAGTCAAAAGATACTGCTTGTGACTGTTaGTTTCTAGCTTCACACCACAGAGGGAAGAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: ESGQSKDTACDC*FLASHHRGKSQ Trigger: TTGACTCTTCCCTCTGTGGTGTGAAGCTAGAAACCAACAGTCACAAGCAGTATCTTTTGACTGGCCAGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032462.9 ENSMUST00000205131.2 |
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