Pregenerated sensors for TIMP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020044Ensembl transcript IDs: ENSMUST00000020234.14
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGGCTTGCTGACCTCAGCTCCTTCTCTCGGCACACCATGGAAATaGTTGTGCCTTCTGCCCCCTGTCAGCACAGGGGAAAGATGCAAG | + |
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Preference number: 1 (lower is better) Translates to: TGLLTSAPSLGTPWK*LCLLPPVSTGERCK Trigger: CTTGCATCTTTCCCCTGTGCTGACAGGGGGCAGAAGGCACAACCATTTCCATGGTGTGCCGAGAGAAGGAGCTGAGGTCAGCAAGCCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR GCA 90 bp | TTGCTGACCTCAGCTCCTTCTCTCGGCACACCATGGAAATGGTTGTaGCTTCTGCCCCCTGTCAGCACAGGGGAAAGATGCAAGGGAATG | + |
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Preference number: 1 (lower is better) Translates to: LLTSAPSLGTPWKWL*LLPPVSTGERCKGM Trigger: CATTCCCTTGCATCTTTCCCCTGTGCTGACAGGGGGCAGAAGGCACAACCATTTCCATGGTGTGCCGAGAGAAGGAGCTGAGGTCAGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR TCA 90 bp | TCATTCTATGAGGTGACCACCTCCGGAAGTGACTTCACCCATTACTaGGCTGGGGAAGAAGTGTATGCTGTCCCCAGATCCAGGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: SFYEVTTSGSDFTHY*AGEEVYAVPRSRRG Trigger: TCCTCTCCTGGATCTGGGGACAGCATACACTTCTTCCCCAGCTCAGTAATGGGTGAAGTCACTTCCGGAGGTGGTCACCTCATAGAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR TCA 90 bp | CCACATCCTGGCTATAGAAGAGAGCTATCCTGGGCAACAGGAGCCTaGGCAGAGGAATTCCTTGGTTGGGAGACAGAAAAGTTGCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: PHPGYRRELSWATGA*AEEFLGWETEKLPG Trigger: TCCAGGCAACTTTTCTGTCTCCCAACCAAGGAATTCCTCTGCTCAGGCTCCTGTTGCCCAGGATAGCTCTCTTCTATAGCCAGGATGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR CCA 90 bp | CCATCTCCTGAACTGTCTTCCTGCCCTGCTCTTCTATCAAACACCTaGACAAAGCAGTGGTATGTGTGGGGTGGGGACAGACTAGAACTT | + |
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Preference number: 1 (lower is better) Translates to: PSPELSSCPALLSNT*TKQWYVWGGDRLEL Trigger: AAGTTCTAGTCTGTCCCCACCCCACACATACCACTGCTTTGTCCAGGTGTTTGATAGAAGAGCAGGGCAGGAAGACAGTTCAGGAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR CCA 90 bp | TGCCCTGCTCTTCTATCAAACACCTGGACAAAGCAGTGGTATGTGTaGGGTGGGGACAGACTAGAACTTGTTCTCTCTCTCTCTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: CPALLSNTWTKQWYV*GGDRLELVLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAACAAGTTCTAGTCTGTCCCCACCCCACACATACCACTGCTTTGTCCAGGTGTTTGATAGAAGAGCAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR CCA 90 bp | ACAACTTCCAACAGTAAAGCCAGAGGTTCAGCTCTTAAGAACCACTaGCTTGCTGACCTCAGCTCCTTCTCTCGGCACACCATGGAAATG | + |
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Preference number: 1 (lower is better) Translates to: TTSNSKARGSALKNH*LADLSSFSRHTMEM Trigger: CATTTCCATGGTGTGCCGAGAGAAGGAGCTGAGGTCAGCAAGCCAGTGGTTCTTAAGAGCTGAACCTCTGGCTTTACTGTTGGAAGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR CCA 90 bp | TGCTCTTCTATCAAACACCTGGACAAAGCAGTGGTATGTGTGGGGTaGGGACAGACTAGAACTTGTTCTCTCTCTCTCTCTCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: CSSIKHLDKAVVCVG*GQTRTCSLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGAGAACAAGTTCTAGTCTGTCCCCACCCCACACATACCACTGCTTTGTCCAGGTGTTTGATAGAAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR CCA 90 bp | AGCCTGAGCAGAGGAATTCCTTGGTTGGGAGACAGAAAAGTTGCCTaGATGAGACAAAGAGAGCTTAGAATCTCAGTTGCCATGGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: SLSRGIPWLGDRKVA*MRQRELRISVAMAL Trigger: CAGAGCCATGGCAACTGAGATTCTAAGCTCTCTTTGTCTCATCCAGGCAACTTTTCTGTCTCCCAACCAAGGAATTCCTCTGCTCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR CCA 90 bp | TTCTCTGGCTGGTGTCTCTTCATCTCTACTGGGCTTCAGCACAGCTaGCTTGCTAGAGGAAAAATAGACAGAGAATCTAAGGTACCCCTG | + |
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Preference number: 1 (lower is better) Translates to: FSGWCLFISTGLQHS*LARGKIDRESKVPL Trigger: CAGGGGTACCTTAGATTCTCTGTCTATTTTTCCTCTAGCAAGCCAGCTGTGCTGAAGCCCAGTAGAGATGAAGAGACACCAGCCAGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR TCA 90 bp | CCAGCTCAGAAAGTTCTGTTACTCTTGGATGCTTGTTCCAGGATCTaGAACATGGGGTCAACCCAAGTATCACAGGGCTGGATAACTGTG | + |
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Preference number: 1 (lower is better) Translates to: PAQKVLLLLDACSRI*NMGSTQVSQGWITV Trigger: CACAGTTATCCAGCCCTGTGATACTTGGGTTGACCCCATGTTTCAGATCCTGGAACAAGCATCCAAGAGTAACAGAACTTTCTGAGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR TCA 90 bp | CACAGGGGAAAGATGCAAGGGAATGAAATCAACCAAGAGAAAACTTaGCACCCATCTCCTGAACTGTCTTCCTGCCCTGCTCTTCTATCA | + |
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Preference number: 1 (lower is better) Translates to: HRGKMQGNEINQEKT*HPSPELSSCPALLS Trigger: TGATAGAAGAGCAGGGCAGGAAGACAGTTCAGGAGATGGGTGTCAAGTTTTCTCTTGGTTGATTTCATTCCCTTGCATCTTTCCCCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR GCA 90 bp | GTATATCCTCTGTGTAGAAGACCTTTCAAATACCTGGCGTCTGTCTaGTTGCTGCCTTTGACTGATTGGGAAACAGTTGGACTTCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: VYPLCRRPFKYLASV*LLPLTDWETVGLLP Trigger: TGGCAGAAGTCCAACTGTTTCCCAATCAGTCAAAGGCAGCAAGCAGACAGACGCCAGGTATTTGAAAGGTCTTCTACACAGAGGATATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR CCA 90 bp | CCTTTCAAATACCTGGCGTCTGTCTGCTTGCTGCCTTTGACTGATTaGGAAACAGTTGGACTTCTGCCAACTTCCTTATCCATGTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: PFKYLASVCLLPLTD*ETVGLLPTSLSMFP Trigger: AGGAAACATGGATAAGGAAGTTGGCAGAAGTCCAACTGTTTCCCAATCAGTCAAAGGCAGCAAGCAGACAGACGCCAGGTATTTGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR CCA 90 bp | AATTTAGCAACAAATACATTCCTTCTAGAGGGGGTTTTCTCTGGCTaGTGTCTCTTCATCTCTACTGGGCTTCAGCACAGCTGGCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: NLATNTFLLEGVFSG*CLFISTGLQHSWLA Trigger: AGCAAGCCAGCTGTGCTGAAGCCCAGTAGAGATGAAGAGACACCAGCCAGAGAAAACCCCCTCTAGAAGGAATGTATTTGTTGCTAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR TCA 90 bp | AAGACCTTTCAAATACCTGGCGTCTGTCTGCTTGCTGCCTTTGACTaGTTGGGAAACAGTTGGACTTCTGCCAACTTCCTTATCCATGTT | + |
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Preference number: 1 (lower is better) Translates to: KTFQIPGVCLLAAFD*LGNSWTSANFLIHV Trigger: AACATGGATAAGGAAGTTGGCAGAAGTCCAACTGTTTCCCAATCAGTCAAAGGCAGCAAGCAGACAGACGCCAGGTATTTGAAAGGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR CCA 90 bp | ACAGTTGGACTTCTGCCAACTTCCTTATCCATGTTTCCTGTGTATTaGGATGAAGAAGTGTATATGGAACTGGGTCTAGGATGTGGTCAA | + |
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Preference number: 1 (lower is better) Translates to: TVGLLPTSLSMFPVY*DEEVYMELGLGCGQ Trigger: TTGACCACATCCTAGACCCAGTTCCATATACACTTCTTCATCCCAATACACAGGAAACATGGATAAGGAAGTTGGCAGAAGTCCAACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR CAA 90 bp | GGCTTGCTGACCTCAGCTCCTTCTCTCGGCACACCATGGAAATGGTaGTGCCTTCTGCCCCCTGTCAGCACAGGGGAAAGATGCAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GLLTSAPSLGTPWKW*CLLPPVSTGERCKG Trigger: TCCCTTGCATCTTTCCCCTGTGCTGACAGGGGGCAGAAGGCACAACCATTTCCATGGTGTGCCGAGAGAAGGAGCTGAGGTCAGCAAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGTGTAGAAGACCTTTCAAATACCTGGCGTCTGTCTGCTTGCTGCCTTTGGGACGCTCGGCGGGATaGGAAGGAGGTGAGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: PLCRRPFKYLASVCLLPLGRSAG*EGGEVG Trigger: CCCCACCTCACCTCCTTCCCATCCCGCCGAGCGTCC...CAAAGGCAGCAAGCAGACAGACGCCAGGTATTTGAAAGGTCTTCTACACAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR CCA 90 bp | CAAACTTCCCCAAGAATTCCTAGGAGACTGTCTCATGGGAGGCAGGAGAGGAAAGGAAGAGTTAGTGTCTaGGACGCTCGGCGGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: QTSPRIPRRLSHGRQERKGRVSV*DARRDG Trigger: CCCATCCCGCCGAGCGTCCCAGACACTAACTCTTCC...TTTCCTCTCCTGCCTCCCATGAGACAGTCTCCTAGGAATTCTTGGGGAAGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCCCAGATCCAGGAGAGGAGTCATTCCACTGTGCAACTGCCCCTTTCATGGACCTTTCAAATACCTaGCGTCTGTCTGCTTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LSPDPGEESFHCATAPFMDLSNT*RLSACC Trigger: GCAGCAAGCAGACAGACGCCAGGTATTTGAAAGGTC...CATGAAAGGGGCAGTTGCACAGTGGAATGACTCCTCTCCTGGATCTGGGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR CAA 90 bp | CAGACGGGCAGGTTGCCTGCTGAACCCAGGCAGATGTTTAAGCCTTaGCCAGCTCAGAAAGTTCTGTTACTCTTGGATGCTTGTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: QTGRLPAEPRQMFKP*PAQKVLLLLDACSR Trigger: CCTGGAACAAGCATCCAAGAGTAACAGAACTTTCTGAGCTGGCAAAGGCTTAAACATCTGCCTGGGTTCAGCAGGCAACCTGCCCGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR CAA 90 bp | GGGAGGCAGGAGAGGAAAGACGTTCATCTCAGCCCTTTGAGTTTTTaGTACAGACGGGCAGGTTGCCTGCTGAACCCAGGCAGATGTTTA | + |
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Preference number: 2 (lower is better) Translates to: GRQERKDVHLSPLSF*YRRAGCLLNPGRCL Trigger: TAAACATCTGCCTGGGTTCAGCAGGCAACCTGCCCGTCTGTACAAAAAACTCAAAGGGCTGAGATGAACGTCTTTCCTCTCCTGCCTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR TCA 90 bp | ATGCTGTCCCCAGATCCAGGAGAGGAGTCATTCCACTGTGCAACTGCCCCTTTCTCTCTTCTCTCCCTCTaGCATGCACACATAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: MLSPDPGEESFHCATAPFSLLSL*HAHIDR Trigger: TCTGTCTATGTGTGCATGTCAGAGGGAGAGAAGAGA...GAAAGGGGCAGTTGCACAGTGGAATGACTCCTCTCCTGGATCTGGGGACAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGACTGCAGAAACCATGACTTCCTGGTTGAGTAGGAGAAAGGTCTTGGAAAATGGTTGTGCCTTCTaGCCCCTGTCAGCACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LWTAETMTSWLSRRKVLENGCAF*PLSAQG Trigger: CCCCTGTGCTGACAGGGGGCAGAAGGCACAACCATT...TTCCAAGACCTTTCTCCTACTCAACCAGGAAGTCATGGTTTCTGCAGTCCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR CAA 90 bp | CTTCCAACAGTAAAGCCAGAGGTTCAGCTCTTAAGAACCACTGGCTaGCTGACCTCAGCTCCTTCTCTCGGCACACCATGGAAATGGTTG | + |
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Preference number: 2 (lower is better) Translates to: LPTVKPEVQLLRTTG*LTSAPSLGTPWKWL Trigger: CAACCATTTCCATGGTGTGCCGAGAGAAGGAGCTGAGGTCAGCAAGCCAGTGGTTCTTAAGAGCTGAACCTCTGGCTTTACTGTTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR TCA 90 bp | ATGCTGTCCCCAGATCCAGGAGAGGAGTCATTCCACTGTGCAACTGCCCCTTTCACACATCCCCCTAGATaGGCTAAACACTACTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: MLSPDPGEESFHCATAPFTHPPR*AKHYFG Trigger: TCCAAAGTAGTGTTTAGCTCATCTAGGGGGATGTGT...GAAAGGGGCAGTTGCACAGTGGAATGACTCCTCTCCTGGATCTGGGGACAGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR GCA 90 bp | TTCTGCCCATTGGTTTTATCTTCAGGTGCCTCATACTTAGGCCTCACCTCAAGTTACAGACGGGCAGGTTaGCTGCTGAACCCAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: FCPLVLSSGASYLGLTSSYRRAG*LLNPGR Trigger: TCTGCCTGGGTTCAGCAGGCAACCTGCCCGTCTGTA...ACTTGAGGTGAGGCCTAAGTATGAGGCACCTGAAGATAAAACCAATGGGCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGTGTAGAAGACCTTTCAAATACCTGGCGTCTGTCTGCTTGCTGCCTTTGATGCCTCGTTCTTTCTaGCTTGGCACCAGAGATCCC | + |
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Preference number: 2 (lower is better) Translates to: PLCRRPFKYLASVCLLPLMPRSF*LGTRDP Trigger: GGGATCTCTGGTGCCAAGCCAGAAAGAACGAGGCAT...CAAAGGCAGCAAGCAGACAGACGCCAGGTATTTGAAAGGTCTTCTACACAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCCCAGATCCAGGAGAGGAGTCATTCCACTGTGCAACTGCCCCTTTCATGTCTCCAACTTACAGTTaGCAAGCTTCCAGCCAAACT | + |
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Preference number: 2 (lower is better) Translates to: LSPDPGEESFHCATAPFMSPTYS*QASSQT Trigger: AGTTTGGCTGGAAGCTTGCCAACTGTAAGTTGGAGA...CATGAAAGGGGCAGTTGCACAGTGGAATGACTCCTCTCCTGGATCTGGGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR CAA 90 bp | AGAGCTATCCTGGGCAACAGGAGCCTGAGCAGAGGAATTCCTTGGTaGGGAGACAGAAAAGTTGCCTGGATGAGACAAAGAGAGCTTAGA | + |
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Preference number: 2 (lower is better) Translates to: RAILGNRSLSRGIPW*GDRKVAWMRQRELR Trigger: TCTAAGCTCTCTTTGTCTCATCCAGGCAACTTTTCTGTCTCCCAACCAAGGAATTCCTCTGCTCAGGCTCCTGTTGCCCAGGATAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCCCATTGGTTTTATCTTCAGGTGCCTCATACTTAGGCCTCACCTCAAGTACCTGGACAAAGCAGTaGTATGTGTGGGGTGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: FCPLVLSSGASYLGLTSSTWTKQ*YVWGGD Trigger: GTCCCCACCCCACACATACCACTGCTTTGTCCAGGT...ACTTGAGGTGAGGCCTAAGTATGAGGCACCTGAAGATAAAACCAATGGGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGACTGCAGAAACCATGACTTCCTGGTTGAGTAGGAGAAAGGTCTTGGAAGCTCTTAAGAACCACTaGCTTGCTGACCTCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: LWTAETMTSWLSRRKVLEALKNH*LADLSS Trigger: GGAGCTGAGGTCAGCAAGCCAGTGGTTCTTAAGAGC...TTCCAAGACCTTTCTCCTACTCAACCAGGAAGTCATGGTTTCTGCAGTCCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGACTGCAGAAACCATGACTTCCTGGTTGAGTAGGAGAAAGGTCTTGGAAACCCTTAGGATTCTATaGGGAGGAGGCTGGAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: LWTAETMTSWLSRRKVLETLRIL*GGGWRS Trigger: ACTCCTCCAGCCTCCTCCCCATAGAATCCTAAGGGT...TTCCAAGACCTTTCTCCTACTCAACCAGGAAGTCATGGTTTCTGCAGTCCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCCCAGATCCAGGAGAGGAGTCATTCCACTGTGCAACTGCCCCTTTCATGCCAGTTGGAAATGGGTaGTGTCAAAACCAAAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LSPDPGEESFHCATAPFMPVGNG*CQNQKE Trigger: TTCTTTTTGGTTTTGACATCACCCATTTCCAACTGG...CATGAAAGGGGCAGTTGCACAGTGGAATGACTCCTCTCCTGGATCTGGGGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCCCAGATCCAGGAGAGGAGTCATTCCACTGTGCAACTGCCCCTTTCATGTCCTGTGTATTGGGATaGAGAAGTGTATATGGAACT | + |
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Preference number: 2 (lower is better) Translates to: LSPDPGEESFHCATAPFMSCVLG*RSVYGT Trigger: AGTTCCATATACACTTCTTCATCCCAATACACAGGA...CATGAAAGGGGCAGTTGCACAGTGGAATGACTCCTCTCCTGGATCTGGGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR TCA 90 bp | CAAACTTCCCCAAGAATTCCTAGGAGACTGTCTCATGGGAGGCAGGAGAGGAAACTTGCTGCCTTTGACTaGTTGGGAAACAGTTGGACT | + |
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Preference number: 2 (lower is better) Translates to: QTSPRIPRRLSHGRQERKLAAFD*LGNSWT Trigger: AGTCCAACTGTTTCCCAATCAGTCAAAGGCAGCAAG...TTTCCTCTCCTGCCTCCCATGAGACAGTCTCCTAGGAATTCTTGGGGAAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR GCA 90 bp | CAAACTTCCCCAAGAATTCCTAGGAGACTGTCTCATGGGAGGCAGGAGAGGAAATCTCTCCCTCTGACATaGACACATAGACAGACTGTC | + |
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Preference number: 2 (lower is better) Translates to: QTSPRIPRRLSHGRQERKSLPLT*THRQTV Trigger: GACAGTCTGTCTATGTGTGCATGTCAGAGGGAGAGA...TTTCCTCTCCTGCCTCCCATGAGACAGTCTCCTAGGAATTCTTGGGGAAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCCCAGATCCAGGAGAGGAGTCATTCCACTGTGCAACTGCCCCTTTCATGATCCCCAGTTGGAAATaGGTGATGTCAAAACCAAAA | + |
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Preference number: 2 (lower is better) Translates to: LSPDPGEESFHCATAPFMIPSWK*VMSKPK Trigger: TTTTGGTTTTGACATCACCCATTTCCAACTGGGGAT...CATGAAAGGGGCAGTTGCACAGTGGAATGACTCCTCTCCTGGATCTGGGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR TCA 90 bp | AGAGGAATTCCTTGGTTGGGAGACAGAAAAGTTGCCTGGATGAGACAAAGAGAGGTTCATTCTATGAGGTaGCCACCTCCGGAAGTGACT | + |
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Preference number: 2 (lower is better) Translates to: RGIPWLGDRKVAWMRQREVHSMR*PPPEVT Trigger: AGTCACTTCCGGAGGTGGTCACCTCATAGAATGAAC...CTCTCTTTGTCTCATCCAGGCAACTTTTCTGTCTCCCAACCAAGGAATTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR GCA 90 bp | AGAGGAATTCCTTGGTTGGGAGACAGAAAAGTTGCCTGGATGAGACAAAGAGAGTACCTGGCGTCTGTCTaGTTGCTGCCTTTGACTGAT | + |
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Preference number: 2 (lower is better) Translates to: RGIPWLGDRKVAWMRQREYLASV*LLPLTD Trigger: ATCAGTCAAAGGCAGCAAGCAGACAGACGCCAGGTA...CTCTCTTTGTCTCATCCAGGCAACTTTTCTGTCTCCCAACCAAGGAATTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGTGTAGAAGACCTTTCAAATACCTGGCGTCTGTCTGCTTGCTGCCTTTGCCAGAGATCCCCAGTTaGAAATGGGTGATGTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: PLCRRPFKYLASVCLLPLPEIPS*KWVMSK Trigger: TTTTGACATCACCCATTTCCAACTGGGGATCTCTGG...CAAAGGCAGCAAGCAGACAGACGCCAGGTATTTGAAAGGTCTTCTACACAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGACTGCAGAAACCATGACTTCCTGGTTGAGTAGGAGAAAGGTCTTGGAACACCCATTACTGAGCTaGGGAAGAAGTGTATGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LWTAETMTSWLSRRKVLEHPLLS*GRSVCC Trigger: ACAGCATACACTTCTTCCCCAGCTCAGTAATGGGTG...TTCCAAGACCTTTCTCCTACTCAACCAGGAAGTCATGGTTTCTGCAGTCCAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCCCATTGGTTTTATCTTCAGGTGCCTCATACTTAGGCCTCACCTCAAGTAAGCAGTGGTATGTGTaGGGTGGGGACAGACTAGAA | + |
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Preference number: 2 (lower is better) Translates to: FCPLVLSSGASYLGLTSSKQWYV*GGDRLE Trigger: TTCTAGTCTGTCCCCACCCCACACATACCACTGCTT...ACTTGAGGTGAGGCCTAAGTATGAGGCACCTGAAGATAAAACCAATGGGCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR CAA 90 bp | TATCCTCTGTGTAGAAGACCTTTCAAATACCTGGCGTCTGTCTGCTaGCTGCCTTTGACTGATTGGGAAACAGTTGGACTTCTGCCAACT | + |
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Preference number: 2 (lower is better) Translates to: YPLCRRPFKYLASVC*LPLTDWETVGLLPT Trigger: AGTTGGCAGAAGTCCAACTGTTTCCCAATCAGTCAAAGGCAGCAAGCAGACAGACGCCAGGTATTTGAAAGGTCTTCTACACAGAGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR CCA 90 bp | GATCTGAAACATGGGGTCAACCCAAGTATCACAGGGCTGGATAACTGTGAGACCTTCATTGTCATCATCTaGGAAGAGTTAGTGTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: DLKHGVNPSITGLDNCETFIVII*EELVSG Trigger: CCCAGACACTAACTCTTCCCAGATGATGACAATGAA...GGTCTCACAGTTATCCAGCCCTGTGATACTTGGGTTGACCCCATGTTTCAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGACTGCAGAAACCATGACTTCCTGGTTGAGTAGGAGAAAGGTCTTGGAAACTGGGTCTAGGATGTaGTCAAGAGAGGAAGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LWTAETMTSWLSRRKVLETGSRM*SREEEE Trigger: TTCTTCTTCCTCTCTTGACCACATCCTAGACCCAGT...TTCCAAGACCTTTCTCCTACTCAACCAGGAAGTCATGGTTTCTGCAGTCCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR-3UTR TCA 90 bp | AGAGGAATTCCTTGGTTGGGAGACAGAAAAGTTGCCTGGATGAGACAAAGAGAGAACCAAGAGAAAACTTaGCACCCATCTCCTGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: RGIPWLGDRKVAWMRQRENQEKT*HPSPEL Trigger: CAGTTCAGGAGATGGGTGTCAAGTTTTCTCTTGGTT...CTCTCTTTGTCTCATCCAGGCAACTTTTCTGTCTCCCAACCAAGGAATTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CAA 90 bp | ATATATCATGAAGAAGAGGTGTATACATGCCTCGTTCTTTCTGGCTaGGCACCAGAGATCCCCAGTTGGAAATGGGTGATGTCAAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: IYHEEEVYTCLVLSG*APEIPSWKWVMSKP Trigger: TGGTTTTGACATCACCCATTTCCAACTGGGGATCTCTGGTGCCAAGCCAGAAAGAACGAGGCATGTATACACCTCTTCTTCATGATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGAATTCCTTGGTTGGGAGACAGAAAAGTTGCCTGGATGAGACAAAGAGAGAGATGGAAAAGATGTTaGGGTATACATATGGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: RGIPWLGDRKVAWMRQRERWKRC*GIHMGG Trigger: CCCTCCCATATGTATACCCCAACATCTTTTCCATCT...CTCTCTTTGTCTCATCCAGGCAACTTTTCTGTCTCCCAACCAAGGAATTCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR-3UTR GCA 90 bp | TTCTGCCCATTGGTTTTATCTTCAGGTGCCTCATACTTAGGCCTCACCTCAAGTAGATGTTTAAGCCTTTaGCAGCTCAGAAAGTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: FCPLVLSSGASYLGLTSSRCLSL*QLRKFC Trigger: ACAGAACTTTCTGAGCTGGCAAAGGCTTAAACATCT...ACTTGAGGTGAGGCCTAAGTATGAGGCACCTGAAGATAAAACCAATGGGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGGACTGCAGAAACCATGACTTCCTGGTTGAGTAGGAGAAAGGTCTTGGAAGATGCTGGATTAAGATaGAAAAGATGTTGGGGTATA | + |
|
Preference number: 2 (lower is better) Translates to: LWTAETMTSWLSRRKVLEDAGLR*KRCWGI Trigger: TATACCCCAACATCTTTTCCATCTTAATCCAGCATC...TTCCAAGACCTTTCTCCTACTCAACCAGGAAGTCATGGTTTCTGCAGTCCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR-3UTR CCA 90 bp | TTGTATATCCTCTGTGTAGAAGACCTTTCAAATACCTGGCGTCTGTCTGCTTGCATGTTTCCTGTGTATTaGGATGAAGAAGTGTATATG | + |
|
Preference number: 2 (lower is better) Translates to: LYILCVEDLSNTWRLSACMFPVY*DEEVYM Trigger: CATATACACTTCTTCATCCCAATACACAGGAAACAT...GCAAGCAGACAGACGCCAGGTATTTGAAAGGTCTTCTACACAGAGGATATACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTGTCCCCAGATCCAGGAGAGGAGTCATTCCACTGTGCAACTGCCCCTTTCGTACAGACGGGCAGGTaGCCTGCTGAACCCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: MLSPDPGEESFHCATAPFVQTGR*PAEPRQ Trigger: CTGCCTGGGTTCAGCAGGCAACCTGCCCGTCTGTAC...GAAAGGGGCAGTTGCACAGTGGAATGACTCCTCTCCTGGATCTGGGGACAGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CCA 72 bp | GGCTTGCTGACCTCAGCTCCTTCTCTCGGCACACCATaGAAATGGTTGTGCCTTCTGCCCCCTGTCAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: GLLTSAPSLGTP*KWLCLLPPVST Trigger: TGTGCTGACAGGGGGCAGAAGGCACAACCATTTCCATGGTGTGCCGAGAGAAGGAGCTGAGGTCAGCAAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR GCA 72 bp | TCAGCTCCTTCTCTCGGCACACCATGGAAATGGTTGTaGCTTCTGCCCCCTGTCAGCACAGGGGAAAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: SAPSLGTPWKWL*LLPPVSTGERC Trigger: GCATCTTTCCCCTGTGCTGACAGGGGGCAGAAGGCACAACCATTTCCATGGTGTGCCGAGAGAAGGAGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR TCA 72 bp | GAGGTGACCACCTCCGGAAGTGACTTCACCCATTACTaGGCTGGGGAAGAAGTGTATGCTGTCCCCAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: EVTTSGSDFTHY*AGEEVYAVPRS Trigger: GGATCTGGGGACAGCATACACTTCTTCCCCAGCTCAGTAATGGGTGAAGTCACTTCCGGAGGTGGTCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR TCA 72 bp | CTCCCCTGCCGTCAGCCAGCCAGTAAGGCAATTAAGTaGAGGGCACCCCGAACAGAAAGCAGAACAAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPCRQPASKAIK*RAPRTESRTKK Trigger: CTTCTTTGTTCTGCTTTCTGTTCGGGGTGCCCTTCACTTAATTGCCTTACTGGCTGGCTGACGGCAGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CCA 72 bp | AACAGTAAAGCCAGAGGTTCAGCTCTTAAGAACCACTaGCTTGCTGACCTCAGCTCCTTCTCTCGGCACACC | + |
|
Preference number: 3 (lower is better) Translates to: NSKARGSALKNH*LADLSSFSRHT Trigger: GGTGTGCCGAGAGAAGGAGCTGAGGTCAGCAAGCCAGTGGTTCTTAAGAGCTGAACCTCTGGCTTTACTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR-3UTR CAA 90 bp | CAAACTTCCCCAAGAATTCCTAGGAGACTGTCTCATGGGAGGCAGGAGAGGAAACTCGTTCTTTCTGGCTaGGCACCAGAGATCCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: QTSPRIPRRLSHGRQERKLVLSG*APEIPS Trigger: ACTGGGGATCTCTGGTGCCAAGCCAGAAAGAACGAG...TTTCCTCTCCTGCCTCCCATGAGACAGTCTCCTAGGAATTCTTGGGGAAGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CCA 72 bp | TTGCCATGGCTCTGGACTGCAGAAACCATGACTTCCTaGTTGAGTAGGAGAAAGGTCTTGGAAAGTGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LPWLWTAETMTS*LSRRKVLESGW Trigger: CCACCCACTTTCCAAGACCTTTCTCCTACTCAACCAGGAAGTCATGGTTTCTGCAGTCCAGAGCCATGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR GCA 72 bp | GGGCCATTGGTTCTGCCCATTGGTTTTATCTTCAGGTaGCTCATACTTAGGCCTCACCTCAAGTCTGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GPLVLPIGFIFR*LILRPHLKSVH Trigger: ATGGACAGACTTGAGGTGAGGCCTAAGTATGAGGCACCTGAAGATAAAACCAATGGGCAGAACCAATGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CCA 72 bp | TGGCCAGTACTTCTCACCAAGACCTCAAAAGCCGACTaGGGCCATTGGTTCTGCCCATTGGTTTTATCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: WPVLLTKTSKAD*GHWFCPLVLSS Trigger: TGAAGATAAAACCAATGGGCAGAACCAATGGCCCCAGTCGGCTTTTGAGGTCTTGGTGAGAAGTACTGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR-3UTR CAA 90 bp | GATCTGAAACATGGGGTCAACCCAAGTATCACAGGGCTGGATAACTGTGAGACCACCAGAGATCCCCAGTaGGAAATGGGTGATGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: DLKHGVNPSITGLDNCETTRDPQ*EMGDVK Trigger: TTTGACATCACCCATTTCCAACTGGGGATCTCTGGT...GGTCTCACAGTTATCCAGCCCTGTGATACTTGGGTTGACCCCATGTTTCAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR-3UTR CAA 90 bp | GATCTGAAACATGGGGTCAACCCAAGTATCACAGGGCTGGATAACTGTGAGACCGTCTGCTTGCTGCCTTaGACTGATTGGGAAACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: DLKHGVNPSITGLDNCETVCLLP*TDWETV Trigger: AACTGTTTCCCAATCAGTCAAAGGCAGCAAGCAGAC...GGTCTCACAGTTATCCAGCCCTGTGATACTTGGGTTGACCCCATGTTTCAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGCCAGCTCAGAAAGTTCTGTTACTCTTGGATGCTTGTTCCAGGATCTGAACTGGCGTCTGTCTGCTaGCTGCCTTTGACTGATTGG | + |
|
Preference number: 3 (lower is better) Translates to: LCQLRKFCYSWMLVPGSELASVC*LPLTDW Trigger: CCAATCAGTCAAAGGCAGCAAGCAGACAGACGCCAG...TTCAGATCCTGGAACAAGCATCCAAGAGTAACAGAACTTTCTGAGCTGGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR TCA 72 bp | CAAATACCTGGCGTCTGTCTGCTTGCTGCCTTTGACTaGTTGGGAAACAGTTGGACTTCTGCCAACTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QIPGVCLLAAFD*LGNSWTSANFL Trigger: AAGGAAGTTGGCAGAAGTCCAACTGTTTCCCAATCAGTCAAAGGCAGCAAGCAGACAGACGCCAGGTATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR TCA 72 bp | GCTCCCTCAGTAACCAATCATGTTCATTCTATGAGGTaGCCACCTCCGGAAGTGACTTCACCCATTACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: APSVTNHVHSMR*PPPEVTSPITE Trigger: CTCAGTAATGGGTGAAGTCACTTCCGGAGGTGGTCACCTCATAGAATGAACATGATTGGTTACTGAGGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR GCA 72 bp | GCCTTTGCCAGCTCAGAAAGTTCTGTTACTCTTGGATaGTTGTTCCAGGATCTGAAACATGGGGTCAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: AFASSESSVTLG*LFQDLKHGVNP Trigger: TGGGTTGACCCCATGTTTCAGATCCTGGAACAAGCATCCAAGAGTAACAGAACTTTCTGAGCTGGCAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CCA 72 bp | ATCAAACACCTGGACAAAGCAGTGGTATGTGTGGGGTaGGGACAGACTAGAACTTGTTCTCTCTCTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: IKHLDKAVVCVG*GQTRTCSLSLS Trigger: AGAGAGAGAGAGAGAACAAGTTCTAGTCTGTCCCCACCCCACACATACCACTGCTTTGTCCAGGTGTTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CCA 72 bp | GACAAAGAGAGCTTAGAATCTCAGTTGCCATGGCTCTaGACTGCAGAAACCATGACTTCCTGGTTGAGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: DKESLESQLPWL*TAETMTSWLSR Trigger: CCTACTCAACCAGGAAGTCATGGTTTCTGCAGTCCAGAGCCATGGCAACTGAGATTCTAAGCTCTCTTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGGACTGCAGAAACCATGACTTCCTGGTTGAGTAGGAGAAAGGTCTTGGAACATTGGTTCTGCCCATaGGTTTTATCTTCAGGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LWTAETMTSWLSRRKVLEHWFCP*VLSSGA Trigger: GGCACCTGAAGATAAAACCAATGGGCAGAACCAATG...TTCCAAGACCTTTCTCCTACTCAACCAGGAAGTCATGGTTTCTGCAGTCCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR-3UTR CAA 90 bp | CAAACTTCCCCAAGAATTCCTAGGAGACTGTCTCATGGGAGGCAGGAGAGGAAAAAAGTTCTGTTACTCTaGGATGCTTGTTCCAGGATC | + |
|
Preference number: 3 (lower is better) Translates to: QTSPRIPRRLSHGRQERKKVLLL*DACSRI Trigger: GATCCTGGAACAAGCATCCAAGAGTAACAGAACTTT...TTTCCTCTCCTGCCTCCCATGAGACAGTCTCCTAGGAATTCTTGGGGAAGTTTG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR TCA 72 bp | AAAGTTCTGTTACTCTTGGATGCTTGTTCCAGGATCTaGAACATGGGGTCAACCCAAGTATCACAGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KVLLLLDACSRI*NMGSTQVSQGW Trigger: CCAGCCCTGTGATACTTGGGTTGACCCCATGTTTCAGATCCTGGAACAAGCATCCAAGAGTAACAGAACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR GCA 72 bp | CTGTGTAGAAGACCTTTCAAATACCTGGCGTCTGTCTaGTTGCTGCCTTTGACTGATTGGGAAACAGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LCRRPFKYLASV*LLPLTDWETVG Trigger: TCCAACTGTTTCCCAATCAGTCAAAGGCAGCAAGCAGACAGACGCCAGGTATTTGAAAGGTCTTCTACACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGGACTGCAGAAACCATGACTTCCTGGTTGAGTAGGAGAAAGGTCTTGGAAGACCCAGACATACAGTaGTATATCCTCTGTGTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LWTAETMTSWLSRRKVLEDPDIQ*YILCVE Trigger: TTCTACACAGAGGATATACAACTGTATGTCTGGGTC...TTCCAAGACCTTTCTCCTACTCAACCAGGAAGTCATGGTTTCTGCAGTCCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR TCA 72 bp | TCTCTCCCTCTGACATGCACACATAGACAGACTGTCTaGCCCAGACATACAGTTGTATATCCTCTGTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLPLTCTHRQTV*PRHTVVYPLCR Trigger: TCTACACAGAGGATATACAACTGTATGTCTGGGTCAGACAGTCTGTCTATGTGTGCATGTCAGAGGGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR TCA 72 bp | GTCTGTCCATGTAAAAGGGAGGTGATTACCAGGGATTaGGAATGGCCCGATGCTGGATTAAGATGGAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VCPCKREVITRD*EWPDAGLRWKR Trigger: TCTTTTCCATCTTAATCCAGCATCGGGCCATTCTCAATCCCTGGTAATCACCTCCCTTTTACATGGACAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CCA 72 bp | AGAGGAATTCCTTGGTTGGGAGACAGAAAAGTTGCCTaGATGAGACAAAGAGAGCTTAGAATCTCAGTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RGIPWLGDRKVA*MRQRELRISVA Trigger: GGCAACTGAGATTCTAAGCTCTCTTTGTCTCATCCAGGCAACTTTTCTGTCTCCCAACCAAGGAATTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CCA 72 bp | TGGTGTCTCTTCATCTCTACTGGGCTTCAGCACAGCTaGCTTGCTAGAGGAAAAATAGACAGAGAATCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: WCLFISTGLQHS*LARGKIDRESK Trigger: CTTAGATTCTCTGTCTATTTTTCCTCTAGCAAGCCAGCTGTGCTGAAGCCCAGTAGAGATGAAGAGACACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CCA 72 bp | GAATGGCCCGATGCTGGATTAAGATGGAAAAGATGTTaGGGTATACATATGGGAGGGCACTTGAGTAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: EWPDAGLRWKRC*GIHMGGHLSKI Trigger: TATCTTACTCAAGTGCCCTCCCATATGTATACCCCAACATCTTTTCCATCTTAATCCAGCATCGGGCCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CCA 72 bp | GGAGGTGATTACCAGGGATTGAGAATGGCCCGATGCTaGATTAAGATGGAAAAGATGTTGGGGTATACATAT | + |
|
Preference number: 3 (lower is better) Translates to: GGDYQGLRMARC*IKMEKMLGYTY Trigger: ATATGTATACCCCAACATCTTTTCCATCTTAATCCAGCATCGGGCCATTCTCAATCCCTGGTAATCACCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGCCAGCTCAGAAAGTTCTGTTACTCTTGGATGCTTGTTCCAGGATCTGAACAGGCACTAATTTCATaGTCATCATCTGGGAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LCQLRKFCYSWMLVPGSEQALIS*SSSGKS Trigger: ACTCTTCCCAGATGATGACAATGAAATTAGTGCCTG...TTCAGATCCTGGAACAAGCATCCAAGAGTAACAGAACTTTCTGAGCTGGCAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGAATTCCTTGGTTGGGAGACAGAAAAGTTGCCTGGATGAGACAAAGAGAGCAAAGCTATAGCTTATaGAAAGCTCAAAAACCGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RGIPWLGDRKVAWMRQREQSYSL*KAQKPL Trigger: GAGCGGTTTTTGAGCTTTCAATAAGCTATAGCTTTG...CTCTCTTTGTCTCATCCAGGCAACTTTTCTGTCTCCCAACCAAGGAATTCCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CCA 72 bp | CTTCTGCCAACTTCCTTATCCATGTTTCCTGTGTATTaGGATGAAGAAGTGTATATGGAACTGGGTCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLPTSLSMFPVY*DEEVYMELGLG Trigger: TCCTAGACCCAGTTCCATATACACTTCTTCATCCCAATACACAGGAAACATGGATAAGGAAGTTGGCAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CCA 72 bp | TTATATGGCAGAGCTAGGACTGGAGAAAGTAAACATTaGAGTCTCCTTAAGCTCCACATCCTGGCTATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LYGRARTGESKH*SLLKLHILAIE Trigger: TTCTATAGCCAGGATGTGGAGCTTAAGGAGACTCCAATGTTTACTTTCTCCAGTCCTAGCTCTGCCATATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR TCA 90 bp | ATGCTGTCCCCAGATCCAGGAGAGGAGTCATTCCACTGTGCAACTGCCCCTTTCTCAGAGGCTTCCGTGTaGATGTACTGCACGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MLSPDPGEESFHCATAPFSEASV*MYCTWG Trigger: GCCCCACGTGCAGTACATTCACACGGAAGCCTCTGA...GAAAGGGGCAGTTGCACAGTGGAATGACTCCTCTCCTGGATCTGGGGACAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR GCA 90 bp | CTCTGGACTGCAGAAACCATGACTTCCTGGTTGAGTAGGAGAAAGGTCTTGGAAGCTTCCGCGCCCCAGTaGCCAAGGCTCCAGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LWTAETMTSWLSRRKVLEASAPQ*PRLQQL Trigger: GAGCTGCTGGAGCCTTGGGCACTGGGGCGCGGAAGC...TTCCAAGACCTTTCTCCTACTCAACCAGGAAGTCATGGTTTCTGCAGTCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR TCA 90 bp | CCTCTGTGTAGAAGACCTTTCAAATACCTGGCGTCTGTCTGCTTGCTGCCTTTGTGCGCTGGGACAGTGTaGGGTGGTCCCACCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLCRRPFKYLASVCLLPLCAGTV*GGPTSP Trigger: TGGAGAGGTGGGACCACCTCACACTGTCCCAGCGCA...CAAAGGCAGCAAGCAGACAGACGCCAGGTATTTGAAAGGTCTTCTACACAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR GCA 90 bp | ATGCTGTCCCCAGATCCAGGAGAGGAGTCATTCCACTGTGCAACTGCCCCTTTCCACCCTTCTGCCGGATaGAGGCGTAGTGTTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: MLSPDPGEESFHCATAPFHPSAG*RRSVWT Trigger: AGTCCAAACACTACGCCTGCATCCGGCAGAAGGGTG...GAAAGGGGCAGTTGCACAGTGGAATGACTCCTCTCCTGGATCTGGGGACAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CCA 90 bp | CCTCTGTGTAGAAGACCTTTCAAATACCTGGCGTCTGTCTGCTTGCTGCCTTTGGCTGATGCTCTTGTCTaGGGGAGCCCATCCTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLCRRPFKYLASVCLLPLADALV*GSPSSV Trigger: TACCGAGGATGGGCTCCCCCAGACAAGAGCATCAGC...CAAAGGCAGCAAGCAGACAGACGCCAGGTATTTGAAAGGTCTTCTACACAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CAA 72 bp | CCATGGCTCTGGACTGCAGAAACCATGACTTCCTGGTaGAGTAGGAGAAAGGTCTTGGAAAGTGGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PWLWTAETMTSW*SRRKVLESGWQ Trigger: CTGCCACCCACTTTCCAAGACCTTTCTCCTACTCAACCAGGAAGTCATGGTTTCTGCAGTCCAGAGCCATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR TCA 90 bp | CAAACTTCCCCAAGAATTCCTAGGAGACTGTCTCATGGGAGGCAGGAGAGGAAACGTGGGGCATCTTACTaGAGCCTCGGTACATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTSPRIPRRLSHGRQERKRGASY*SLGTSS Trigger: TGAAGATGTACCGAGGCTTCAGTAAGATGCCCCACG...TTTCCTCTCCTGCCTCCCATGAGACAGTCTCCTAGGAATTCTTGGGGAAGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CCA 90 bp | AGAGGAATTCCTTGGTTGGGAGACAGAAAAGTTGCCTGGATGAGACAAAGAGAGAAGGCATCCTGGGGATaGCTGGGAGAGCATGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGIPWLGDRKVAWMRQREKASWG*LGEHVH Trigger: GTGCACATGCTCTCCCAGCCATCCCCAGGATGCCTT...CTCTCTTTGTCTCATCCAGGCAACTTTTCTGTCTCCCAACCAAGGAATTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CAA 72 bp | CTGGGCAACAGGAGCCTGAGCAGAGGAATTCCTTGGTaGGGAGACAGAAAAGTTGCCTGGATGAGACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGNRSLSRGIPW*GDRKVAWMRQR Trigger: TCTTTGTCTCATCCAGGCAACTTTTCTGTCTCCCAACCAAGGAATTCCTCTGCTCAGGCTCCTGTTGCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| CDS-3UTR CCA 90 bp | CTTTGCCAGCTCAGAAAGTTCTGTTACTCTTGGATGCTTGTTCCAGGATCTGAACATCCTGGGGATGGCTaGGAGAGCATGTGCACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCQLRKFCYSWMLVPGSEHPGDG*ESMCTL Trigger: AAGCGTGCACATGCTCTCCCAGCCATCCCCAGGATG...TTCAGATCCTGGAACAAGCATCCAAGAGTAACAGAACTTTCTGAGCTGGCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CCA 90 bp | TTCTGCCCATTGGTTTTATCTTCAGGTGCCTCATACTTAGGCCTCACCTCAAGTTTGCAGAAGGCATCCTaGGGATGGCTGGGAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FCPLVLSSGASYLGLTSSLQKAS*GWLGEH Trigger: ATGCTCTCCCAGCCATCCCCAGGATGCCTTCTGCAA...ACTTGAGGTGAGGCCTAAGTATGAGGCACCTGAAGATAAAACCAATGGGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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| CDS-3UTR CCA 90 bp | AGAGGAATTCCTTGGTTGGGAGACAGAAAAGTTGCCTGGATGAGACAAAGAGAGTCTTTCCCACCACTTTaGCCCGGATCACGATGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RGIPWLGDRKVAWMRQRESFPPL*PGSRCR Trigger: CCGACATCGTGATCCGGGCCAAAGTGGTGGGAAAGA...CTCTCTTTGTCTCATCCAGGCAACTTTTCTGTCTCCCAACCAAGGAATTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CCA 90 bp | TTGTATATCCTCTGTGTAGAAGACCTTTCAAATACCTGGCGTCTGTCTGCTTGCTGGGACAGTGTGAGGTaGTCCCACCTCTCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LYILCVEDLSNTWRLSACWDSVR*SHLSTK Trigger: CTTTGTGGAGAGGTGGGACCACCTCACACTGTCCCA...GCAAGCAGACAGACGCCAGGTATTTGAAAGGTCTTCTACACAGAGGATATACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CAA 72 bp | AGGTTGCCTGCTGAACCCAGGCAGATGTTTAAGCCTTaGCCAGCTCAGAAAGTTCTGTTACTCTTGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLPAEPRQMFKP*PAQKVLLLLDA Trigger: AGCATCCAAGAGTAACAGAACTTTCTGAGCTGGCAAAGGCTTAAACATCTGCCTGGGTTCAGCAGGCAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR GCA 90 bp | CTTTGCCAGCTCAGAAAGTTCTGTTACTCTTGGATGCTTGTTCCAGGATCTGAATCACGATGTCGGAGTTaGAGAAGGCATCCTGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCQLRKFCYSWMLVPGSESRCRS*RRHPGD Trigger: ATCCCCAGGATGCCTTCTGCAACTCCGACATCGTGA...TTCAGATCCTGGAACAAGCATCCAAGAGTAACAGAACTTTCTGAGCTGGCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CCA 90 bp | CTTTGCCAGCTCAGAAAGTTCTGTTACTCTTGGATGCTTGTTCCAGGATCTGAATGCAGGCGTAGTGTTTaGACTGATAGCCAGGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LCQLRKFCYSWMLVPGSECRRSV*TDSQGT Trigger: GGTACCCTGGCTATCAGTCCAAACACTACGCCTGCA...TTCAGATCCTGGAACAAGCATCCAAGAGTAACAGAACTTTCTGAGCTGGCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR GCA 90 bp | CTCTGGACTGCAGAAACCATGACTTCCTGGTTGAGTAGGAGAAAGGTCTTGGAAACCTCTCCACAAAGTTaGACAGTCCTGTGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LWTAETMTSWLSRRKVLETSPQS*TVLCTS Trigger: AGATGTACACAGGACTGTGCAACTTTGTGGAGAGGT...TTCCAAGACCTTTCTCCTACTCAACCAGGAAGTCATGGTTTCTGCAGTCCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CCA 90 bp | CAAACTTCCCCAAGAATTCCTAGGAGACTGTCTCATGGGAGGCAGGAGAGGAAAAGAGACACTCATTCTTaGAGGTCACAAAACAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTSPRIPRRLSHGRQERKRDTHS*RSQNKA Trigger: TGCCTTGTTTTGTGACCTCCAAGAATGAGTGTCTCT...TTTCCTCTCCTGCCTCCCATGAGACAGTCTCCTAGGAATTCTTGGGGAAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CCA 90 bp | CTTTGCCAGCTCAGAAAGTTCTGTTACTCTTGGATGCTTGTTCCAGGATCTGAACAGGGTACCCAAAATTaGAGAGCATGTCGGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCQLRKFCYSWMLVPGSEQGTQN*RACRSR Trigger: TCTGGACCGACATGCTCTCCAATTTTGGGTACCCTG...TTCAGATCCTGGAACAAGCATCCAAGAGTAACAGAACTTTCTGAGCTGGCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CAA 72 bp | TGGATAGTGTCAGGTGTGTGTTTCTCCAACTTACAGTaGGCAAGCTTCCAGCCAAACTTCCCCAAGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: WIVSGVCFSNLQ*ASFQPNFPKNS Trigger: GGAATTCTTGGGGAAGTTTGGCTGGAAGCTTGCCAACTGTAAGTTGGAGAAACACACACCTGACACTATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CCA 90 bp | TTCTGCCCATTGGTTTTATCTTCAGGTGCCTCATACTTAGGCCTCACCTCAAGTCCTGTCAGCAGGTACTaGTATTTGTTGACTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCPLVLSSGASYLGLTSSPVSRY*YLLTSS Trigger: GCTAGAAGTCAACAAATACCAGTACCTGCTGACAGG...ACTTGAGGTGAGGCCTAAGTATGAGGCACCTGAAGATAAAACCAATGGGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| 3UTR CAA 72 bp | TTTGCCAGCTCAGAAAGTTCTGTTACTCTTGGATGCTaGTTCCAGGATCTGAAACATGGGGTCAACCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FASSESSVTLGC*FQDLKHGVNPS Trigger: ACTTGGGTTGACCCCATGTTTCAGATCCTGGAACAAGCATCCAAGAGTAACAGAACTTTCTGAGCTGGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS CCA 90 bp | CCCGGATCACGATGTCGGAGTTGCAGAAGGCATCCTGGGGATGGCTaGGAGAGCATGTGCACGCTTCCGCGCCCCAGTGCCCAAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGSRCRSCRRHPGDG*ESMCTLPRPSAQGS Trigger: GGAGCCTTGGGCACTGGGGCGCGGAAGCGTGCACATGCTCTCCCAGCCATCCCCAGGATGCCTTCTGCAACTCCGACATCGTGATCCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS CCA 90 bp | TTGGCCCGGATCACGATGTCGGAGTTGCAGAAGGCATCCTGGGGATaGCTGGGAGAGCATGTGCACGCTTCCGCGCCCCAGTGCCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LARITMSELQKASWG*LGEHVHASAPQCPR Trigger: CCTTGGGCACTGGGGCGCGGAAGCGTGCACATGCTCTCCCAGCCATCCCCAGGATGCCTTCTGCAACTCCGACATCGTGATCCGGGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS CCA 90 bp | ACCACTTTGGCCCGGATCACGATGTCGGAGTTGCAGAAGGCATCCTaGGGATGGCTGGGAGAGCATGTGCACGCTTCCGCGCCCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TTLARITMSELQKAS*GWLGEHVHASAPQC Trigger: GCACTGGGGCGCGGAAGCGTGCACATGCTCTCCCAGCCATCCCCAGGATGCCTTCTGCAACTCCGACATCGTGATCCGGGCCAAAGTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS GCA 90 bp | GAGCCCATCCTCGGTACCAGCTGCAGTAGCCACCCTTCTGCCGGATaGAGGCGTAGTGTTTGGACTGATAGCCAGGGTACCCAAAATTGG | + |
|
Preference number: 5 (lower is better) Translates to: EPILGTSCSSHPSAG*RRSVWTDSQGTQNW Trigger: CCAATTTTGGGTACCCTGGCTATCAGTCCAAACACTACGCCTGCATCCGGCAGAAGGGTGGCTACTGCAGCTGGTACCGAGGATGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCCAGATCCAGGAGAGGAGTCATTCCACTGTGCAACTGCCCCTTTCATGCAGGGGTCTGTGGCGTaGCTGATGCTCTTGTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSPDPGEESFHCATAPFMQGSVA*LMLLSG Trigger: CCCAGACAAGAGCATCAGCAACGCCACAGACCCCTG...CATGAAAGGGGCAGTTGCACAGTGGAATGACTCCTCTCCTGGATCTGGGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS CCA 90 bp | ACCAGCTGCAGTAGCCACCCTTCTGCCGGATGCAGGCGTAGTGTTTaGACTGATAGCCAGGGTACCCAAAATTGGAGAGCATGTCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSCSSHPSAGCRRSV*TDSQGTQNWRACRS Trigger: GGACCGACATGCTCTCCAATTTTGGGTACCCTGGCTATCAGTCCAAACACTACGCCTGCATCCGGCAGAAGGGTGGCTACTGCAGCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CAA 90 bp | CTCTGGACTGCAGAAACCATGACTTCCTGGTTGAGTAGGAGAAAGGTCTTGGAAGCGTTGCTGATGCTCTaGTCTGGGGGAGCCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LWTAETMTSWLSRRKVLEALLML*SGGAHP Trigger: AGGATGGGCTCCCCCAGACAAGAGCATCAGCAACGC...TTCCAAGACCTTTCTCCTACTCAACCAGGAAGTCATGGTTTCTGCAGTCCAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CAA 90 bp | CAAACTTCCCCAAGAATTCCTAGGAGACTGTCTCATGGGAGGCAGGAGAGGAAACCAGGGTACCCAAAATaGGAGAGCATGTCGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QTSPRIPRRLSHGRQERKPGYPK*ESMSVQ Trigger: CTGGACCGACATGCTCTCCAATTTTGGGTACCCTGG...TTTCCTCTCCTGCCTCCCATGAGACAGTCTCCTAGGAATTCTTGGGGAAGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCCAGATCCAGGAGAGGAGTCATTCCACTGTGCAACTGCCCCTTTCATGAGGTACTGGTATTTGTaGACTTCTAGCTTGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSPDPGEESFHCATAPFMRYWYL*TSSLRP Trigger: TGGCCTCAAGCTAGAAGTCAACAAATACCAGTACCT...CATGAAAGGGGCAGTTGCACAGTGGAATGACTCCTCTCCTGGATCTGGGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS TCA 90 bp | TTGACTTCTAGCTTGAGGCCACAAAGACTTTCAGAGGCTTCCGTGTaGATGTACTGCACGTGGGGCATCTTACTGAAGCCTCGGTACATC | + |
|
Preference number: 5 (lower is better) Translates to: LTSSLRPQRLSEASV*MYCTWGILLKPRYI Trigger: GATGTACCGAGGCTTCAGTAAGATGCCCCACGTGCAGTACATTCACACGGAAGCCTCTGAAAGTCTTTGTGGCCTCAAGCTAGAAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CAA 90 bp | CAAACTTCCCCAAGAATTCCTAGGAGACTGTCTCATGGGAGGCAGGAGAGGAAACACCTCTCCACAAAGTaGCACAGTCCTGTGTACATC | + |
|
Preference number: 5 (lower is better) Translates to: QTSPRIPRRLSHGRQERKHLSTK*HSPVYI Trigger: GATGTACACAGGACTGTGCAACTTTGTGGAGAGGTG...TTTCCTCTCCTGCCTCCCATGAGACAGTCTCCTAGGAATTCTTGGGGAAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CAA 90 bp | CTTTGCCAGCTCAGAAAGTTCTGTTACTCTTGGATGCTTGTTCCAGGATCTGAAATCACGATGTCGGAGTaGCAGAAGGCATCCTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LCQLRKFCYSWMLVPGSEITMSE*QKASWG Trigger: TCCCCAGGATGCCTTCTGCAACTCCGACATCGTGAT...TTCAGATCCTGGAACAAGCATCCAAGAGTAACAGAACTTTCTGAGCTGGCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CAA 90 bp | CTTTGCCAGCTCAGAAAGTTCTGTTACTCTTGGATGCTTGTTCCAGGATCTGAATTCTTTCCCACCACTTaGGCCCGGATCACGATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LCQLRKFCYSWMLVPGSEFFPTT*ARITMS Trigger: CGACATCGTGATCCGGGCCAAAGTGGTGGGAAAGAA...TTCAGATCCTGGAACAAGCATCCAAGAGTAACAGAACTTTCTGAGCTGGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CAA 90 bp | GATCTGAAACATGGGGTCAACCCAAGTATCACAGGGCTGGATAACTGTGAGACCCAGAGACACTCATTCTaGGAGGTCACAAAACAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DLKHGVNPSITGLDNCETQRHSF*EVTKQG Trigger: GCCTTGTTTTGTGACCTCCAAGAATGAGTGTCTCTG...GGTCTCACAGTTATCCAGCCCTGTGATACTTGGGTTGACCCCATGTTTCAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCCATTGGTTTTATCTTCAGGTGCCTCATACTTAGGCCTCACCTCAAGTAGCAGGTACTGGTATTaGTTGACTTCTAGCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FCPLVLSSGASYLGLTSSSRYWY*LTSSLR Trigger: CCTCAAGCTAGAAGTCAACAAATACCAGTACCTGCT...ACTTGAGGTGAGGCCTAAGTATGAGGCACCTGAAGATAAAACCAATGGGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS-3UTR CAA 90 bp | CTTTGCCAGCTCAGAAAGTTCTGTTACTCTTGGATGCTTGTTCCAGGATCTGAATTGTTGACTTCTAGCTaGAGGCCACAAAGACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LCQLRKFCYSWMLVPGSELLTSS*RPQRLS Trigger: TGAAAGTCTTTGTGGCCTCAAGCTAGAAGTCAACAA...TTCAGATCCTGGAACAAGCATCCAAGAGTAACAGAACTTTCTGAGCTGGCAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS CCA 72 bp | CGATGTCGGAGTTGCAGAAGGCATCCTGGGGATGGCTaGGAGAGCATGTGCACGCTTCCGCGCCCCAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RCRSCRRHPGDG*ESMCTLPRPSA Trigger: GGCACTGGGGCGCGGAAGCGTGCACATGCTCTCCCAGCCATCCCCAGGATGCCTTCTGCAACTCCGACATCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS CCA 72 bp | GCCCGGATCACGATGTCGGAGTTGCAGAAGGCATCCTaGGGATGGCTGGGAGAGCATGTGCACGCTTCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: ARITMSELQKAS*GWLGEHVHASA Trigger: CGCGGAAGCGTGCACATGCTCTCCCAGCCATCCCCAGGATGCCTTCTGCAACTCCGACATCGTGATCCGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS GCA 72 bp | TGCTCTTGTCTGGGGGAGCCCATCCTCGGTACCAGCTaGAGTAGCCACCCTTCTGCCGGATGCAGGCGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: CSCLGEPILGTS*SSHPSAGCRRS Trigger: ACTACGCCTGCATCCGGCAGAAGGGTGGCTACTGCAGCTGGTACCGAGGATGGGCTCCCCCAGACAAGAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS CCA 72 bp | ATCACGATGTCGGAGTTGCAGAAGGCATCCTGGGGATaGCTGGGAGAGCATGTGCACGCTTCCGCGCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ITMSELQKASWG*LGEHVHASAPQ Trigger: CTGGGGCGCGGAAGCGTGCACATGCTCTCCCAGCCATCCCCAGGATGCCTTCTGCAACTCCGACATCGTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS GCA 72 bp | CTCGGTACCAGCTGCAGTAGCCACCCTTCTGCCGGATaGAGGCGTAGTGTTTGGACTGATAGCCAGGGTACC | + |
|
Preference number: 6 (lower is better) Translates to: LGTSCSSHPSAG*RRSVWTDSQGT Trigger: GGTACCCTGGCTATCAGTCCAAACACTACGCCTGCATCCGGCAGAAGGGTGGCTACTGCAGCTGGTACCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS CAA 72 bp | TTTCCCACCACTTTGGCCCGGATCACGATGTCGGAGTaGCAGAAGGCATCCTGGGGATGGCTGGGAGAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FPTTLARITMSE*QKASWGWLGEH Trigger: ATGCTCTCCCAGCCATCCCCAGGATGCCTTCTGCAACTCCGACATCGTGATCCGGGCCAAAGTGGTGGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS CCA 72 bp | AGTAGCCACCCTTCTGCCGGATGCAGGCGTAGTGTTTaGACTGATAGCCAGGGTACCCAAAATTGGAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSHPSAGCRRSV*TDSQGTQNWRA Trigger: TGCTCTCCAATTTTGGGTACCCTGGCTATCAGTCCAAACACTACGCCTGCATCCGGCAGAAGGGTGGCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS CAA 72 bp | CACCTCTCCACAAAGTTGCACAGTCCTGTGTACATCTaGCCTTCATACACGCGCCCTGTCAGCAGGTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: HLSTKLHSPVYI*PSYTRPVSRYW Trigger: CCAGTACCTGCTGACAGGGCGCGTGTATGAAGGCAAGATGTACACAGGACTGTGCAACTTTGTGGAGAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS GCA 72 bp | ACCTCTCCACAAAGTTGCACAGTCCTGTGTACATCTTaGCTTCATACACGCGCCCTGTCAGCAGGTACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TSPQSCTVLCTS*LHTRALSAGTG Trigger: ACCAGTACCTGCTGACAGGGCGCGTGTATGAAGGCAAGATGTACACAGGACTGTGCAACTTTGTGGAGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS TCA 72 bp | AGCTTGAGGCCACAAAGACTTTCAGAGGCTTCCGTGTaGATGTACTGCACGTGGGGCATCTTACTGAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLRPQRLSEASV*MYCTWGILLKP Trigger: AGGCTTCAGTAAGATGCCCCACGTGCAGTACATTCACACGGAAGCCTCTGAAAGTCTTTGTGGCCTCAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS CAA 90 bp | ATCTTGCCTTCATACACGCGCCCTGTCAGCAGGTACTGGTATTTGTaGACTTCTAGCTTGAGGCCACAAAGACTTTCAGAGGCTTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: ILPSYTRPVSRYWYL*TSSLRPQRLSEASV Trigger: CACGGAAGCCTCTGAAAGTCTTTGTGGCCTCAAGCTAGAAGTCAACAAATACCAGTACCTGCTGACAGGGCGCGTGTATGAAGGCAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS CAA 90 bp | TACATCTTGCCTTCATACACGCGCCCTGTCAGCAGGTACTGGTATTaGTTGACTTCTAGCTTGAGGCCACAAAGACTTTCAGAGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: YILPSYTRPVSRYWY*LTSSLRPQRLSEAS Trigger: GGAAGCCTCTGAAAGTCTTTGTGGCCTCAAGCTAGAAGTCAACAAATACCAGTACCTGCTGACAGGGCGCGTGTATGAAGGCAAGATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS CAA 72 bp | TCATACACGCGCCCTGTCAGCAGGTACTGGTATTTGTaGACTTCTAGCTTGAGGCCACAAAGACTTTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SYTRPVSRYWYL*TSSLRPQRLSE Trigger: CTCTGAAAGTCTTTGTGGCCTCAAGCTAGAAGTCAACAAATACCAGTACCTGCTGACAGGGCGCGTGTATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS CAA 72 bp | CCTTCATACACGCGCCCTGTCAGCAGGTACTGGTATTaGTTGACTTCTAGCTTGAGGCCACAAAGACTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PSYTRPVSRYWY*LTSSLRPQRLS Trigger: TGAAAGTCTTTGTGGCCTCAAGCTAGAAGTCAACAAATACCAGTACCTGCTGACAGGGCGCGTGTATGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS TCA 72 bp | TGGAGGTCACAAAACAAGGCAAGTAGTAGCAGGACTTaGTCTTGCAATTGCAACCCAGGTGGTAGCGGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: WRSQNKASSSRT*SCNCNPGGSGN Trigger: ATTACCGCTACCACCTGGGTTGCAATTGCAAGATCAAGTCCTGCTACTACTTGCCTTGTTTTGTGACCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
||
| CDS CCA 72 bp | AATTGGAGAGCATGTCGGTCCAGAGACACTCATTCTTaGAGGTCACAAAACAAGGCAAGTAGTAGCAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: NWRACRSRDTHS*RSQNKASSSRT Trigger: AGTCCTGCTACTACTTGCCTTGTTTTGTGACCTCCAAGAATGAGTGTCTCTGGACCGACATGCTCTCCAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020234.14 |
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