Pregenerated sensors for TIMP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017466Ensembl transcript IDs: ENSMUST00000017610.10, ENSMUST00000155707.3
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACACAGTGCTCAGGCTGGCAGAGGGAAGGGGTATGGCAGGGAACCTaGCCCGCCTGTCCCTCCAGACCCACTACCATGTCTAGGGAAAAT | + |
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Preference number: 1 (lower is better) Translates to: TQCSGWQREGVWQGT*PACPSRPTTMSREN Trigger: ATTTTCCCTAGACATGGTAGTGGGTCTGGAGGGACAGGCGGGCCAGGTTCCCTGCCATACCCCTTCCCTCTGCCAGCCTGAGCACTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CCA 90 bp | GGGCCTGATGCGACAGAGAGCCAAACCGAGCCGTGCTGCTCAGCCTaGATGCTTGAAGCTTGCTTGGAAAGGGGTGAAGAATGGCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: GPDATESQTEPCCSA*MLEACLERGEEWLG Trigger: CCCAAGCCATTCTTCACCCCTTTCCAAGCAAGCTTCAAGCATCCAGGCTGAGCAGCACGGCTCGGTTTGGCTCTCTGTCGCATCAGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CCA 90 bp | GGAAGCAAACAGGCAGGGCGGGATAGACTGCAGGGTCTCGTTGGCTaGTCCAGGCCAGCATCCAAGGAAGAACATCACTGCACAACACGA | + |
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Preference number: 1 (lower is better) Translates to: GSKQAGRDRLQGLVG*SRPASKEEHHCTTR Trigger: TCGTGTTGTGCAGTGATGTTCTTCCTTGGATGCTGGCCTGGACCAGCCAACGAGACCCTGCAGTCTATCCCGCCCTGCCTGTTTGCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR GCA 90 bp | GAGAGCCAAACCGAGCCGTGCTGCTCAGCCTGGATGCTTGAAGCTTaGTTGGAAAGGGGTGAAGAATGGCTTGGGAAGCTTGAGAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: ESQTEPCCSAWMLEA*LERGEEWLGKLESG Trigger: GCCACTCTCAAGCTTCCCAAGCCATTCTTCACCCCTTTCCAAGCAAGCTTCAAGCATCCAGGCTGAGCAGCACGGCTCGGTTTGGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR GCA 90 bp | CTGATGCGACAGAGAGCCAAACCGAGCCGTGCTGCTCAGCCTGGATaGTTGAAGCTTGCTTGGAAAGGGGTGAAGAATGGCTTGGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: LMRQRAKPSRAAQPG*LKLAWKGVKNGLGS Trigger: GCTTCCCAAGCCATTCTTCACCCCTTTCCAAGCAAGCTTCAAGCATCCAGGCTGAGCAGCACGGCTCGGTTTGGCTCTCTGTCGCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR GCA 90 bp | GGTCTCGTTGGCTGGTCCAGGCCAGCATCCAAGGAAGAACATCACTaGACAACACGAAAATGCCCTCAGAAGGGGCAGGCTGACTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: GLVGWSRPASKEEHH*TTRKCPQKGQADSC Trigger: ACAGGAGTCAGCCTGCCCCTTCTGAGGGCATTTTCGTGTTGTGCAGTGATGTTCTTCCTTGGATGCTGGCCTGGACCAGCCAACGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR GCA 90 bp | TTCTTAGACCCGAGGGAGACCAGGGTCCTGAAAGTCCATACCAGATaGAGGAGGGATGGGAAGCATTTGCAAGGGCCAGAGAGAGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: FLDPRETRVLKVHTR*RRDGKHLQGPEREV Trigger: CACCTCTCTCTCTGGCCCTTGCAAATGCTTCCCATCCCTCCTGCATCTGGTATGGACTTTCAGGACCCTGGTCTCCCTCGGGTCTAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR GCA 90 bp | TCCAGGCCAGCATCCAAGGAAGAACATCACTGCACAACACGAAAATaGCCTCAGAAGGGGCAGGCTGACTCCTGTGTGTCCTCCCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: SRPASKEEHHCTTRK*PQKGQADSCVSSQS Trigger: AGACTGGGAGGACACACAGGAGTCAGCCTGCCCCTTCTGAGGGCATTTTCGTGTTGTGCAGTGATGTTCTTCCTTGGATGCTGGCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR GCA 90 bp | GAGGGATGGGAAGCATTTGCAAGGGCCAGAGAGAGAGGTGGCCACTaGAGAAAACGAGGGACATGTCACTCTCAGGATGAAAAGGACCTG | + |
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Preference number: 1 (lower is better) Translates to: EGWEAFARARERGGH*RKRGTCHSQDEKDL Trigger: CAGGTCCTTTTCATCCTGAGAGTGACATGTCCCTCGTTTTCTGCAGTGGCCACCTCTCTCTCTGGCCCTTGCAAATGCTTCCCATCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CCA 90 bp | TGCTCAGCCTGGATGCTTGAAGCTTGCTTGGAAAGGGGTGAAGAATaGCTTGGGAAGCTTGAGAGTGGCAACAAGGACTGCCAAGCACCC | + |
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Preference number: 1 (lower is better) Translates to: CSAWMLEACLERGEE*LGKLESGNKDCQAP Trigger: GGGTGCTTGGCAGTCCTTGTTGCCACTCTCAAGCTTCCCAAGCCATTCTTCACCCCTTTCCAAGCAAGCTTCAAGCATCCAGGCTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CCA 90 bp | GGTTTGCTGGGAAGGCATTTGAGTGGCTGTTGCTCAGCTGCCATCTaGCACTTTGTCCCAAAGGTTCGTTTGCTCGCTCGGTTTCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: GLLGRHLSGCCSAAI*HFVPKVRLLARFPL Trigger: GAGAGGAAACCGAGCGAGCAAACGAACCTTTGGGACAAAGTGCCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR TCA 90 bp | ATAAAAGTAGAGACTGATACAGAGCATCAGGCGCGCTCGGCTTGCTaGCTTTCAACAACTCTCACGTATCGCCAGCGTGGGGTGTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: IKVETDTEHQARSAC*LSTTLTYRQRGVLG Trigger: CCCCAACACCCCACGCTGGCGATACGTGAGAGTTGTTGAAAGTCAGCAAGCCGAGCGCGCCTGATGCTCTGTATCAGTCTCTACTTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR TCA 90 bp | GAGAGGTGGCCACTGCAGAAAACGAGGGACATGTCACTCTCAGGATaGAAAGGACCTGGTAGGCCGGCTACACAGTCTTACAACAACCTT | + |
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Preference number: 1 (lower is better) Translates to: ERWPLQKTRDMSLSG*KGPGRPATQSYNNL Trigger: AAGGTTGTTGTAAGACTGTGTAGCCGGCCTACCAGGTCCTTTTCATCCTGAGAGTGACATGTCCCTCGTTTTCTGCAGTGGCCACCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR TCA 90 bp | GCTCGGTTTCCTCTCATCTGCCTGGTGTGGCTAGAAACCCCAGCATaGGTGGAAAACAGAAAGGCCGTCTTTCAGAACCGGTATACTCAG | + |
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Preference number: 1 (lower is better) Translates to: ARFPLICLVWLETPA*VENRKAVFQNRYTQ Trigger: CTGAGTATACCGGTTCTGAAAGACGGCCTTTCTGTTTTCCACTCATGCTGGGGTTTCTAGCCACACCAGGCAGATGAGAGGAAACCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR GCA 90 bp | TGCAATTGGTTTGCTGGGAAGGCATTTGAGTGGCTGTTGCTCAGCTaGCATCTGGCACTTTGTCCCAAAGGTTCGTTTGCTCGCTCGGTT | + |
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Preference number: 1 (lower is better) Translates to: CNWFAGKAFEWLLLS*HLALCPKGSFARSV Trigger: AACCGAGCGAGCAAACGAACCTTTGGGACAAAGTGCCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAACCAATTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR GCA 90 bp | GAAGATGAGAAAGGGTCCCTCTGTCCCAGGCCAGCTACCATACCATaGATTCCACTCTGGGTTCGATGCTTCCTCGATGCTTCAACATTT | + |
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Preference number: 1 (lower is better) Translates to: EDEKGSLCPRPATIP*IPLWVRCFLDASTF Trigger: AAATGTTGAAGCATCGAGGAAGCATCGAACCCAGAGTGGAATGCATGGTATGGTAGCTGGCCTGGGACAGAGGGACCCTTTCTCATCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR TCA 90 bp | CGCATCAGGCAGCGATTTGGAAATTGCTACCATGTAAACGTCATCTaGAATATTGCGAGTTGCTGGCATGACGGGAGTAAGGGAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: RIRQRFGNCYHVNVI*NIASCWHDGSKGGR Trigger: CCTCCCTCCCTTACTCCCGTCATGCCAGCAACTCGCAATATTTCAGATGACGTTTACATGGTAGCAATTTCCAAATCGCTGCCTGATGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR TCA 90 bp | CCAGAACATGTCATGAAATCAGCAGAAACAGGCACTGTTACATATTaGTACCACCGCACAGGAAGCAAACAGGCAGGGCGGGATAGACTG | + |
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Preference number: 1 (lower is better) Translates to: PEHVMKSAETGTVTY*YHRTGSKQAGRDRL Trigger: CAGTCTATCCCGCCCTGCCTGTTTGCTTCCTGTGCGGTGGTATCAATATGTAACAGTGCCTGTTTCTGCTGATTTCATGACATGTTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR GCA 90 bp | CTATATATTGCAATTGGTTTGCTGGGAAGGCATTTGAGTGGCTGTTaGTCAGCTGCCATCTGGCACTTTGTCCCAAAGGTTCGTTTGCTC | + |
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Preference number: 1 (lower is better) Translates to: LYIAIGLLGRHLSGC*SAAIWHFVPKVRLL Trigger: GAGCAAACGAACCTTTGGGACAAAGTGCCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAACCAATTGCAATATATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR TCA 90 bp | CAAGAACGCTCACGGCGAACATCAGAAACAAACCAGAACATGTCATaGAATCAGCAGAAACAGGCACTGTTACATATTGATACCACCGCA | + |
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Preference number: 1 (lower is better) Translates to: QERSRRTSETNQNMS*NQQKQALLHIDTTA Trigger: TGCGGTGGTATCAATATGTAACAGTGCCTGTTTCTGCTGATTTCATGACATGTTCTGGTTTGTTTCTGATGTTCGCCGTGAGCGTTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CCA 90 bp | GCAGCAAGCCCACGGATATGTCTTAATACGCATCAGGCAGCGATTTaGAAATTGCTACCATGTAAACGTCATCTGAAATATTGCGAGTTG | + |
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Preference number: 1 (lower is better) Translates to: AASPRICLNTHQAAI*KLLPCKRHLKYCEL Trigger: CAACTCGCAATATTTCAGATGACGTTTACATGGTAGCAATTTCCAAATCGCTGCCTGATGCGTATTAAGACATATCCGTGGGCTTGCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR TCA 90 bp | CCCCTACAACCAAGAGTTCAAACAGAAACAAAATCAACAAAGCGTTaGGTTATGCAGCAAGCCCACGGATATGTCTTAATACGCATCAGG | + |
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Preference number: 1 (lower is better) Translates to: PLQPRVQTETKSTKR*VMQQAHGYVLIRIR Trigger: CCTGATGCGTATTAAGACATATCCGTGGGCTTGCTGCATAACTCAACGCTTTGTTGATTTTGTTTCTGTTTGAACTCTTGGTTGTAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CAA 90 bp | GCACAGGAAGCAAACAGGCAGGGCGGGATAGACTGCAGGGTCTCGTaGGCTGGTCCAGGCCAGCATCCAAGGAAGAACATCACTGCACAA | + |
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Preference number: 2 (lower is better) Translates to: AQEANRQGGIDCRVS*AGPGQHPRKNITAQ Trigger: TTGTGCAGTGATGTTCTTCCTTGGATGCTGGCCTGGACCAGCCAACGAGACCCTGCAGTCTATCCCGCCCTGCCTGTTTGCTTCCTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR TCA 90 bp | GACAGGGGAGAGGAAGGCAGCAATGACTTGGTTGAAGCCAGAAACACGGCTCAGCCTGTCTGCTGCATGTaGCAGTGCCAGAGAGACCTG | + |
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Preference number: 2 (lower is better) Translates to: DRGEEGSNDLVEARNTAQPVCCM*QCQRDL Trigger: CAGGTCTCTCTGGCACTGTCACATGCAGCAGACAGG...CTGAGCCGTGTTTCTGGCTTCAACCAAGTCATTGCTGCCTTCCTCTCCCCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR CCA 90 bp | GACAGGGGAGAGGAAGGCAGCAATGACTTGGTTGAAGCCAGAAACACGGCTCAGGGCCAGAGAGAGAGGTaGCCACTGCAGAAAACGAGG | + |
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Preference number: 2 (lower is better) Translates to: DRGEEGSNDLVEARNTAQGQRER*PLQKTR Trigger: CCTCGTTTTCTGCAGTGGCCACCTCTCTCTCTGGCC...CTGAGCCGTGTTTCTGGCTTCAACCAAGTCATTGCTGCCTTCCTCTCCCCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CAA 90 bp | AGCCAAACCGAGCCGTGCTGCTCAGCCTGGATGCTTGAAGCTTGCTaGGAAAGGGGTGAAGAATGGCTTGGGAAGCTTGAGAGTGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: SQTEPCCSAWMLEAC*ERGEEWLGKLESGN Trigger: GTTGCCACTCTCAAGCTTCCCAAGCCATTCTTCACCCCTTTCCAAGCAAGCTTCAAGCATCCAGGCTGAGCAGCACGGCTCGGTTTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CAA 90 bp | ATGCGACAGAGAGCCAAACCGAGCCGTGCTGCTCAGCCTGGATGCTaGAAGCTTGCTTGGAAAGGGGTGAAGAATGGCTTGGGAAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: MRQRAKPSRAAQPGC*KLAWKGVKNGLGSL Trigger: CAAGCTTCCCAAGCCATTCTTCACCCCTTTCCAAGCAAGCTTCAAGCATCCAGGCTGAGCAGCACGGCTCGGTTTGGCTCTCTGTCGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR TCA 90 bp | GAAATATTGCGAGTTGCTGGCATGACGGGAGTAAGGGAGGGAGGCCCAGGGCTTATGGCTTGGGAAGCTTaGGAGTGGCAACAAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: EILRVAGMTGVREGGPGLMAWEA*EWQQGL Trigger: CAGTCCTTGTTGCCACTCTCAAGCTTCCCAAGCCAT...AAGCCCTGGGCCTCCCTCCCTTACTCCCGTCATGCCAGCAACTCGCAATATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR TCA 90 bp | GTGCAAAGTCTAATGCTACGAAAGGCATCAACACGGCACAAGAACGCTCACGGCAACAGCGGCAGGGCCTaGTGCGACAGAGAGCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: VQSLMLRKASTRHKNAHGNSGRA*CDREPN Trigger: GTTTGGCTCTCTGTCGCATCAGGCCCTGCCGCTGTT...GCCGTGAGCGTTCTTGTGCCGTGTTGATGCCTTTCGTAGCATTAGACTTTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR TCA 90 bp | GTGGCTAGAAACCCCAGCATGAGTGGAAAACAGAAAGGCCGTCTTTCAGAACCGTCAGAAGGGGCAGGCTaGCTCCTGTGTGTCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: VARNPSMSGKQKGRLSEPSEGAG*LLCVLP Trigger: TGGGAGGACACACAGGAGTCAGCCTGCCCCTTCTGA...CGGTTCTGAAAGACGGCCTTTCTGTTTTCCACTCATGCTGGGGTTTCTAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CAA 90 bp | CAGCCTGGATGCTTGAAGCTTGCTTGGAAAGGGGTGAAGAATGGCTaGGGAAGCTTGAGAGTGGCAACAAGGACTGCCAAGCACCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: QPGCLKLAWKGVKNG*GSLRVATRTAKHPS Trigger: TGAGGGGTGCTTGGCAGTCCTTGTTGCCACTCTCAAGCTTCCCAAGCCATTCTTCACCCCTTTCCAAGCAAGCTTCAAGCATCCAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CAA 90 bp | TGCTTGAAGCTTGCTTGGAAAGGGGTGAAGAATGGCTTGGGAAGCTaGAGAGTGGCAACAAGGACTGCCAAGCACCCCTCACCACAGATC | + |
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Preference number: 2 (lower is better) Translates to: CLKLAWKGVKNGLGS*RVATRTAKHPSPQI Trigger: GATCTGTGGTGAGGGGTGCTTGGCAGTCCTTGTTGCCACTCTCAAGCTTCCCAAGCCATTCTTCACCCCTTTCCAAGCAAGCTTCAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR TCA 90 bp | GTGGCTAGAAACCCCAGCATGAGTGGAAAACAGAAAGGCCGTCTTTCAGAACCGATGTCACTCTCAGGATaGAAAGGACCTGGTAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: VARNPSMSGKQKGRLSEPMSLSG*KGPGRP Trigger: CGGCCTACCAGGTCCTTTTCATCCTGAGAGTGACAT...CGGTTCTGAAAGACGGCCTTTCTGTTTTCCACTCATGCTGGGGTTTCTAGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR TCA 90 bp | GCAATTGGTTTGCTGGGAAGGCATTTGAGTGGCTGTTGCTCAGCTGCCATCTGGTTGCTTGGAAAGGGGTaGAGAATGGCTTGGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: AIGLLGRHLSGCCSAAIWLLGKG*RMAWEA Trigger: AGCTTCCCAAGCCATTCTTCACCCCTTTCCAAGCAA...CCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAACCAATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR TCA 90 bp | GCAATTGGTTTGCTGGGAAGGCATTTGAGTGGCTGTTGCTCAGCTGCCATCTGGCTAGAAACCCCAGCATaGGTGGAAAACAGAAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: AIGLLGRHLSGCCSAAIWLETPA*VENRKA Trigger: GGCCTTTCTGTTTTCCACTCATGCTGGGGTTTCTAG...CCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAACCAATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR GCA 90 bp | CCTGGTGTGGCTAGAAACCCCAGCATGAGTGGAAAACAGAAAGGCCGTCTTTCAGAGAGAGGTGGCCACTaGAGAAAACGAGGGACATGT | + |
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Preference number: 2 (lower is better) Translates to: PGVARNPSMSGKQKGRLSERGGH*RKRGTC Trigger: ACATGTCCCTCGTTTTCTGCAGTGGCCACCTCTCTC...TGAAAGACGGCCTTTCTGTTTTCCACTCATGCTGGGGTTTCTAGCCACACCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR GCA 90 bp | GTGCAAAGTCTAATGCTACGAAAGGCATCAACACGGCACAAGAACGCTCACGGCTGCACAACACGAAAATaGCCTCAGAAGGGGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: VQSLMLRKASTRHKNAHGCTTRK*PQKGQA Trigger: AGCCTGCCCCTTCTGAGGGCATTTTCGTGTTGTGCA...GCCGTGAGCGTTCTTGTGCCGTGTTGATGCCTTTCGTAGCATTAGACTTTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR TCA 90 bp | CTTAATACGCATCAGGCAGCGATTTGGAAATTGCTACCATGTAAACGTCATCTGTCCCTGCCCCCAGCATaGGACCTCACAGACCCCACT | + |
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Preference number: 2 (lower is better) Translates to: LNTHQAAIWKLLPCKRHLSLPPA*DLTDPT Trigger: AGTGGGGTCTGTGAGGTCTCATGCTGGGGGCAGGGA...CAGATGACGTTTACATGGTAGCAATTTCCAAATCGCTGCCTGATGCGTATTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR GCA 90 bp | AGCATGAGTGGAAAACAGAAAGGCCGTCTTTCAGAACCGGTATACTCAGAGGGTGGGATGGGAAGCATTTaGAAGGGCCAGAGAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SMSGKQKGRLSEPVYSEGGMGSI*KGQRER Trigger: CCTCTCTCTCTGGCCCTTGCAAATGCTTCCCATCCC...ACCCTCTGAGTATACCGGTTCTGAAAGACGGCCTTTCTGTTTTCCACTCATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR GCA 90 bp | AAAGGACCTGGTAGGCCGGCTACACAGTCTTACAACAACCTTCAAGAGTTTCTGCACATTCCCAGGCTCTaGCCTAACAGAGCTAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: KGPGRPATQSYNNLQEFLHIPRL*PNRARV Trigger: TACCCTAGCTCTGTTAGGGCAGAGCCTGGGAATGTG...CAGAAACTCTTGAAGGTTGTTGTAAGACTGTGTAGCCGGCCTACCAGGTCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR CCA 90 bp | AAGGACCTGGTAGGCCGGCTACACAGTCTTACAACAACCTTCAAGAGTTTCTGCAAGGGATGTCAAAGCTaGACCAGTCTAAACCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: KDLVGRLHSLTTTFKSFCKGCQS*TSLNPQ Trigger: CTGAGGGTTTAGACTGGTCCAGCTTTGACATCCCTT...GCAGAAACTCTTGAAGGTTGTTGTAAGACTGTGTAGCCGGCCTACCAGGTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR CCA 90 bp | CTTAATACGCATCAGGCAGCGATTTGGAAATTGCTACCATGTAAACGTCATCTGCAGATGCAGGAGGGATaGGAAGCATTTGCAAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LNTHQAAIWKLLPCKRHLQMQEG*EAFARA Trigger: GGCCCTTGCAAATGCTTCCCATCCCTCCTGCATCTG...CAGATGACGTTTACATGGTAGCAATTTCCAAATCGCTGCCTGATGCGTATTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CAA 90 bp | ACTATATATTGCAATTGGTTTGCTGGGAAGGCATTTGAGTGGCTGTaGCTCAGCTGCCATCTGGCACTTTGTCCCAAAGGTTCGTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: TIYCNWFAGKAFEWL*LSCHLALCPKGSFA Trigger: AGCAAACGAACCTTTGGGACAAAGTGCCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAACCAATTGCAATATATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR TCA 90 bp | AGCATGAGTGGAAAACAGAAAGGCCGTCTTTCAGAACCGGTATACTCAGAGGGTTGCGTGCTTAGTTACTaGCACAGAAATCAACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SMSGKQKGRLSEPVYSEGCVLSY*HRNQQG Trigger: ACCCTGTTGATTTCTGTGTCAGTAACTAAGCACGCA...ACCCTCTGAGTATACCGGTTCTGAAAGACGGCCTTTCTGTTTTCCACTCATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR GCA 90 bp | CGTTGGCTGGTCCAGGCCAGCATCCAAGGAAGAACATCACTGCACAACACGAAATTGATGTTTTATTCATaGTGTTTCCAGGAAGGGATG | + |
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Preference number: 2 (lower is better) Translates to: RWLVQASIQGRTSLHNTKLMFYS*CFQEGM Trigger: CATCCCTTCCTGGAAACAGCATGAATAAAACATCAA...TTTCGTGTTGTGCAGTGATGTTCTTCCTTGGATGCTGGCCTGGACCAGCCAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CAA 90 bp | CAACACCTTAAACTATATATTGCAATTGGTTTGCTGGGAAGGCATTaGAGTGGCTGTTGCTCAGCTGCCATCTGGCACTTTGTCCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: QHLKLYIAIGLLGRH*SGCCSAAIWHFVPK Trigger: CTTTGGGACAAAGTGCCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAACCAATTGCAATATATAGTTTAAGGTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGGCTGTCTATATTGTTAGTGATAAAGCTCTGCCTGTCTTAACCCCCATCAGAGTTTCTGCAAAATaGACATTCCCAGGCTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: RVAVYIVSDKALPVLTPIRVSAK*TFPGSA Trigger: GGCAGAGCCTGGGAATGTGCATTTTGCAGAAACTCT...GATGGGGGTTAAGACAGGCAGAGCTTTATCACTAACAATATAGACAGCCACTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR-3UTR GCA 90 bp | GGGGAGTCCTTAACCGTTTCTTTGGGGTTTCTGATGGTTAGGACAGGGTTGGAGTTGTGTGTGAGCATATaGGTGCATGTATGGATAATA | + |
|
Preference number: 2 (lower is better) Translates to: GESLTVSLGFLMVRTGLELCVSI*VHVWII Trigger: TATTATCCATACATGCACGCATATGCTCACACACAA...CTCCAACCCTGTCCTAACCATCAGAAACCCCAAAGAAACGGTTAAGGACTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTGGCTGTCTATATTGTTAGTGATAAAGCTCTGCCTGTCTTAACCCCCATCAAGGCAGCAATGACTTaGTTGAAGCCAGAAACACGG | + |
|
Preference number: 2 (lower is better) Translates to: RVAVYIVSDKALPVLTPIKAAMT*LKPETR Trigger: CCGTGTTTCTGGCTTCAACCAAGTCATTGCTGCCTT...GATGGGGGTTAAGACAGGCAGAGCTTTATCACTAACAATATAGACAGCCACTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR-3UTR TCA 90 bp | AGTGGAAAACAGAAAGGCCGTCTTTCAGAACCGGTATACTCAGAGGGTCTTTCCGTGAACCCACTTGGATaGTTGATGTTTTATTCATGC | + |
|
Preference number: 2 (lower is better) Translates to: SGKQKGRLSEPVYSEGLSVNPLG*LMFYSC Trigger: GCATGAATAAAACATCAATCATCCAAGTGGGTTCAC...GGAAAGACCCTCTGAGTATACCGGTTCTGAAAGACGGCCTTTCTGTTTTCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR CAA 90 bp | ATAACAGAAGTAAAACAACACCTTAAACTATATATTGCAATTGGTTaGCTGGGAAGGCATTTGAGTGGCTGTTGCTCAGCTGCCATCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ITEVKQHLKLYIAIG*LGRHLSGCCSAAIW Trigger: CCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAACCAATTGCAATATATAGTTTAAGGTGTTGTTTTACTTCTGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR-3UTR TCA 90 bp | AGAGTGGCTGTCTATATTGTTAGTGATAAAGCTCTGCCTGTCTTAACCCCCATCTCACCTTTAGGAAAATaGGATGGATCTGAAAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: RVAVYIVSDKALPVLTPISPLGK*DGSENK Trigger: CTTGTTTTCAGATCCATCTCATTTTCCTAAAGGTGA...GATGGGGGTTAAGACAGGCAGAGCTTTATCACTAACAATATAGACAGCCACTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR CCA 72 bp | TCAGGCTGGCAGAGGGAAGGGGTATGGCAGGGAACCTaGCCCGCCTGTCCCTCCAGACCCACTACCATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SGWQREGVWQGT*PACPSRPTTMS Trigger: AGACATGGTAGTGGGTCTGGAGGGACAGGCGGGCCAGGTTCCCTGCCATACCCCTTCCCTCTGCCAGCCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR CCA 72 bp | CAGGCAGGGCGGGATAGACTGCAGGGTCTCGTTGGCTaGTCCAGGCCAGCATCCAAGGAAGAACATCACTGC | + |
|
Preference number: 3 (lower is better) Translates to: QAGRDRLQGLVG*SRPASKEEHHC Trigger: GCAGTGATGTTCTTCCTTGGATGCTGGCCTGGACCAGCCAACGAGACCCTGCAGTCTATCCCGCCCTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR GCA 72 bp | GAATGGCTTGGGAAGCTTGAGAGTGGCAACAAGGACTaGCAAGCACCCCTCACCACAGATCCCTGCCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: EWLGKLESGNKD*QAPLTTDPCPQ Trigger: CTGGGGGCAGGGATCTGTGGTGAGGGGTGCTTGGCAGTCCTTGTTGCCACTCTCAAGCTTCCCAAGCCATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR TCA 72 bp | AGCCAGAAACACGGCTCAGGGAGGGCTTCCATTCGCTaGAGTCTGTGGATTCATGGGGCTGACTGGGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: SQKHGSGRASIR*SLWIHGADWDS Trigger: GGAGTCCCAGTCAGCCCCATGAATCCACAGACTTCAGCGAATGGAAGCCCTCCCTGAGCCGTGTTTCTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR GCA 72 bp | CCGAGGGAGACCAGGGTCCTGAAAGTCCATACCAGATaGAGGAGGGATGGGAAGCATTTGCAAGGGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PRETRVLKVHTR*RRDGKHLQGPE Trigger: CTCTGGCCCTTGCAAATGCTTCCCATCCCTCCTGCATCTGGTATGGACTTTCAGGACCCTGGTCTCCCTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR-3UTR CAA 90 bp | GCAATTGGTTTGCTGGGAAGGCATTTGAGTGGCTGTTGCTCAGCTGCCATCTGGTCCTGGTGTAGGGGCTaGGGTAGGGAGAGTCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AIGLLGRHLSGCCSAAIWSWCRG*GRESLR Trigger: CCTCAGACTCTCCCTACCCAAGCCCCTACACCAGGA...CCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAACCAATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGTGTGGCTAGAAACCCCAGCATGAGTGGAAAACAGAAAGGCCGTCTTTCAGACTGCAGGGTCTCGTaGGCTGGTCCAGGCCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PGVARNPSMSGKQKGRLSDCRVS*AGPGQH Trigger: ATGCTGGCCTGGACCAGCCAACGAGACCCTGCAGTC...TGAAAGACGGCCTTTCTGTTTTCCACTCATGCTGGGGTTTCTAGCCACACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR TCA 72 bp | GAGACTGATACAGAGCATCAGGCGCGCTCGGCTTGCTaGCTTTCAACAACTCTCACGTATCGCCAGCGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ETDTEHQARSAC*LSTTLTYRQRG Trigger: CCCACGCTGGCGATACGTGAGAGTTGTTGAAAGTCAGCAAGCCGAGCGCGCCTGATGCTCTGTATCAGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR CCA 72 bp | CAGGGTCCTGAAAGTCCATACCAGATGCAGGAGGGATaGGAAGCATTTGCAAGGGCCAGAGAGAGAGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QGPESPYQMQEG*EAFARARERGG Trigger: GCCACCTCTCTCTCTGGCCCTTGCAAATGCTTCCCATCCCTCCTGCATCTGGTATGGACTTTCAGGACCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR CCA 72 bp | GCGACAGAGAGCCAAACCGAGCCGTGCTGCTCAGCCTaGATGCTTGAAGCTTGCTTGGAAAGGGGTGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ATESQTEPCCSA*MLEACLERGEE Trigger: TTCTTCACCCCTTTCCAAGCAAGCTTCAAGCATCCAGGCTGAGCAGCACGGCTCGGTTTGGCTCTCTGTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAGCTTGAGAGTGGCAACAAGGACTGCCAAGCACCCCTCACCACAGATCCCGAAGGCAGCAATGACTaGGTTGAAGCCAGAAACACG | + |
|
Preference number: 3 (lower is better) Translates to: GKLESGNKDCQAPLTTDPEGSND*VEARNT Trigger: CGTGTTTCTGGCTTCAACCAAGTCATTGCTGCCTTC...GGGATCTGTGGTGAGGGGTGCTTGGCAGTCCTTGTTGCCACTCTCAAGCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR GCA 72 bp | ACCGAGCCGTGCTGCTCAGCCTGGATGCTTGAAGCTTaGTTGGAAAGGGGTGAAGAATGGCTTGGGAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TEPCCSAWMLEA*LERGEEWLGKL Trigger: AAGCTTCCCAAGCCATTCTTCACCCCTTTCCAAGCAAGCTTCAAGCATCCAGGCTGAGCAGCACGGCTCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR GCA 72 bp | AAAGGGTCCCTCTGTCCCAGGCCAGCTACCATACCATaGATTCCACTCTGGGTTCGATGCTTCCTCGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: KGSLCPRPATIP*IPLWVRCFLDA Trigger: AGCATCGAGGAAGCATCGAACCCAGAGTGGAATGCATGGTATGGTAGCTGGCCTGGGACAGAGGGACCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR CCA 72 bp | GGGATGGGAAGCATTTGCAAGGGCCAGAGAGAGAGGTaGCCACTGCAGAAAACGAGGGACATGTCACTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GMGSICKGQRER*PLQKTRDMSLS Trigger: TGAGAGTGACATGTCCCTCGTTTTCTGCAGTGGCCACCTCTCTCTCTGGCCCTTGCAAATGCTTCCCATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR CCA 72 bp | GGAAGGCATTTGAGTGGCTGTTGCTCAGCTGCCATCTaGCACTTTGTCCCAAAGGTTCGTTTGCTCGCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: GRHLSGCCSAAI*HFVPKVRLLAR Trigger: CCGAGCGAGCAAACGAACCTTTGGGACAAAGTGCCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR TCA 72 bp | GCTAGGGTACCCTTAATGCTGCCTGTCTGCTGCATGTaGCAGTGCCAGAGAGACCTGGTAACAAGTCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ARVPLMLPVCCM*QCQRDLVTSLC Trigger: GCACAGACTTGTTACCAGGTCTCTCTGGCACTGTCACATGCAGCAGACAGGCAGCATTAAGGGTACCCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR GCA 72 bp | GCATCCAAGGAAGAACATCACTGCACAACACGAAAATaGCCTCAGAAGGGGCAGGCTGACTCCTGTGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ASKEEHHCTTRK*PQKGQADSCVS Trigger: GGACACACAGGAGTCAGCCTGCCCCTTCTGAGGGCATTTTCGTGTTGTGCAGTGATGTTCTTCCTTGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR CCA 72 bp | AGCCGTGCTGCTCAGCCTGGATGCTTGAAGCTTGCTTaGAAAGGGGTGAAGAATGGCTTGGGAAGCTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SRAAQPGCLKLA*KGVKNGLGSLR Trigger: TCTCAAGCTTCCCAAGCCATTCTTCACCCCTTTCCAAGCAAGCTTCAAGCATCCAGGCTGAGCAGCACGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR TCA 72 bp | CCACTGCAGAAAACGAGGGACATGTCACTCTCAGGATaGAAAGGACCTGGTAGGCCGGCTACACAGTCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: PLQKTRDMSLSG*KGPGRPATQSY Trigger: GTAAGACTGTGTAGCCGGCCTACCAGGTCCTTTTCATCCTGAGAGTGACATGTCCCTCGTTTTCTGCAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR GCA 72 bp | GAAGCATTTGCAAGGGCCAGAGAGAGAGGTGGCCACTaGAGAAAACGAGGGACATGTCACTCTCAGGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: EAFARARERGGH*RKRGTCHSQDE Trigger: TTCATCCTGAGAGTGACATGTCCCTCGTTTTCTGCAGTGGCCACCTCTCTCTCTGGCCCTTGCAAATGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGAAAACAGAAAGGCCGTCTTTCAGAACCGGTATACTCAGAGGGTCTTTCCAGGGATGGGAAGCATTaGCAAGGGCCAGAGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SGKQKGRLSEPVYSEGLSRDGKH*QGPERE Trigger: CTCTCTCTCTGGCCCTTGCAAATGCTTCCCATCCCT...GGAAAGACCCTCTGAGTATACCGGTTCTGAAAGACGGCCTTTCTGTTTTCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR GCA 72 bp | TTTGCTGGGAAGGCATTTGAGTGGCTGTTGCTCAGCTaGCATCTGGCACTTTGTCCCAAAGGTTCGTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: FAGKAFEWLLLS*HLALCPKGSFA Trigger: AGCAAACGAACCTTTGGGACAAAGTGCCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR GCA 72 bp | GCAATTGGTTTGCTGGGAAGGCATTTGAGTGGCTGTTaGTCAGCTGCCATCTGGCACTTTGTCCCAAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: AIGLLGRHLSGC*SAAIWHFVPKV Trigger: AACCTTTGGGACAAAGTGCCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAACCAATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR CCA 72 bp | TGGATGCTTGAAGCTTGCTTGGAAAGGGGTGAAGAATaGCTTGGGAAGCTTGAGAGTGGCAACAAGGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: WMLEACLERGEE*LGKLESGNKDC Trigger: GCAGTCCTTGTTGCCACTCTCAAGCTTCCCAAGCCATTCTTCACCCCTTTCCAAGCAAGCTTCAAGCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGCAAAGTCTAATGCTACGAAAGGCATCAACACGGCACAAGAACGCTCACGGCATGCTTGAAGCTTGCTaGGAAAGGGGTGAAGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: VQSLMLRKASTRHKNAHGMLEAC*ERGEEW Trigger: CCATTCTTCACCCCTTTCCAAGCAAGCTTCAAGCAT...GCCGTGAGCGTTCTTGTGCCGTGTTGATGCCTTTCGTAGCATTAGACTTTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR TCA 72 bp | GTCATGAAATCAGCAGAAACAGGCACTGTTACATATTaGTACCACCGCACAGGAAGCAAACAGGCAGGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: VMKSAETGTVTY*YHRTGSKQAGR Trigger: CCGCCCTGCCTGTTTGCTTCCTGTGCGGTGGTATCAATATGTAACAGTGCCTGTTTCTGCTGATTTCATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR-3UTR CAA 90 bp | CTTAATACGCATCAGGCAGCGATTTGGAAATTGCTACCATGTAAACGTCATCTGTCAGAGGCTTTTCAATaGGCCACAGGGGCTCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LNTHQAAIWKLLPCKRHLSEAFQ*ATGALS Trigger: TGACAGAGCCCCTGTGGCCAATTGAAAAGCCTCTGA...CAGATGACGTTTACATGGTAGCAATTTCCAAATCGCTGCCTGATGCGTATTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR TCA 72 bp | AACTATATATTGCAATTGGTTTGCTGGGAAGGCATTTaGGTGGCTGTTGCTCAGCTGCCATCTGGCACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: NYILQLVCWEGI*VAVAQLPSGTL Trigger: CAAAGTGCCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAACCAATTGCAATATATAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR-3UTR CAA 90 bp | AGCATGAGTGGAAAACAGAAAGGCCGTCTTTCAGAACCGGTATACTCAGAGGGTTTAACCCCCATCCTATaGGCATCAGAAAGAAAATTG | + |
|
Preference number: 3 (lower is better) Translates to: SMSGKQKGRLSEPVYSEGLTPIL*ASERKL Trigger: CAATTTTCTTTCTGATGCCAATAGGATGGGGGTTAA...ACCCTCTGAGTATACCGGTTCTGAAAGACGGCCTTTCTGTTTTCCACTCATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR CCA 72 bp | TTTATTCATGCTGTTTCCAGGAAGGGATGTCAAAGCTaGACCAGTCTAAACCCTCAGAGGCTTTTCAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: FIHAVSRKGCQS*TSLNPQRLFNW Trigger: CCAATTGAAAAGCCTCTGAGGGTTTAGACTGGTCCAGCTTTGACATCCCTTCCTGGAAACAGCATGAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR TCA 72 bp | CCGGTATACTCAGAGGGTCTTTCCTTTATAATAATTTaGACCAGATACAAAAGACGGGAGAGGCTGGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PVYSEGLSFIII*TRYKRRERLEK Trigger: CTTTTCCAGCCTCTCCCGTCTTTTGTATCTGGTTCAAATTATTATAAAGGAAAGACCCTCTGAGTATACCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR CCA 72 bp | CCACGGATATGTCTTAATACGCATCAGGCAGCGATTTaGAAATTGCTACCATGTAAACGTCATCTGAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: PRICLNTHQAAI*KLLPCKRHLKY Trigger: ATATTTCAGATGACGTTTACATGGTAGCAATTTCCAAATCGCTGCCTGATGCGTATTAAGACATATCCGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR TCA 72 bp | CCAAGAGTTCAAACAGAAACAAAATCAACAAAGCGTTaGGTTATGCAGCAAGCCCACGGATATGTCTTAATA | + |
|
Preference number: 3 (lower is better) Translates to: PRVQTETKSTKR*VMQQAHGYVLI Trigger: TATTAAGACATATCCGTGGGCTTGCTGCATAACTCAACGCTTTGTTGATTTTGTTTCTGTTTGAACTCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| CDS-3UTR GCA 90 bp | ACAGATCCCTGCCCCCAGCATGAGACCTCACAGACCCCACTGAGGGTGTGTGTAAACGCCTGTTGCGGGTaGACCGGGGAGCAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TDPCPQHETSQTPLRVCVNACCG*TGEQLQ Trigger: CTGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTT...TACACACACCCTCAGTGGGGTCTGTGAGGTCTCATGCTGGGGGCAGGGATCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| CDS-3UTR TCA 90 bp | ACAGATCCCTGCCCCCAGCATGAGACCTCACAGACCCCACTGAGGGTGTGTGTAGACCCCGCACACTGCTaGAGAGGGGGCCGTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TDPCPQHETSQTPLRVCVDPAHC*RGGRVD Trigger: ATCTACACGGCCCCCTCTTCAGCAGTGTGCGGGGTC...TACACACACCCTCAGTGGGGTCTGTGAGGTCTCATGCTGGGGGCAGGGATCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR CAA 72 bp | GCAAACAGGCAGGGCGGGATAGACTGCAGGGTCTCGTaGGCTGGTCCAGGCCAGCATCCAAGGAAGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: ANRQGGIDCRVS*AGPGQHPRKNI Trigger: GATGTTCTTCCTTGGATGCTGGCCTGGACCAGCCAACGAGACCCTGCAGTCTATCCCGCCCTGCCTGTTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| CDS-3UTR CCA 90 bp | GACAGGGGAGAGGAAGGCAGCAATGACTTGGTTGAAGCCAGAAACACGGCTCAGCAAGAAACTCTTGCTTaGGGGGTGCCGCCCCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: DRGEEGSNDLVEARNTAQQETLA*GVPPRG Trigger: ACCGCGGGGCGGCACCCCCCAAGCAAGAGTTTCTTG...CTGAGCCGTGTTTCTGGCTTCAACCAAGTCATTGCTGCCTTCCTCTCCCCTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| CDS-3UTR CCA 90 bp | AGCATGAGTGGAAAACAGAAAGGCCGTCTTTCAGAACCGGTATACTCAGAGGGTCCGGGCGCAGCAGCGTaGCTAGCAGCAGGAGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SMSGKQKGRLSEPVYSEGPGAAA*LAAGGR Trigger: TCGGCCTCCTGCTGCTAGCCACGCTGCTGCGCCCGG...ACCCTCTGAGTATACCGGTTCTGAAAGACGGCCTTTCTGTTTTCCACTCATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR CAA 72 bp | GAGCCGTGCTGCTCAGCCTGGATGCTTGAAGCTTGCTaGGAAAGGGGTGAAGAATGGCTTGGGAAGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EPCCSAWMLEAC*ERGEEWLGKLE Trigger: CTCAAGCTTCCCAAGCCATTCTTCACCCCTTTCCAAGCAAGCTTCAAGCATCCAGGCTGAGCAGCACGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR CAA 72 bp | AGAGCCAAACCGAGCCGTGCTGCTCAGCCTGGATGCTaGAAGCTTGCTTGGAAAGGGGTGAAGAATGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RAKPSRAAQPGC*KLAWKGVKNGL Trigger: CAAGCCATTCTTCACCCCTTTCCAAGCAAGCTTCAAGCATCCAGGCTGAGCAGCACGGCTCGGTTTGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| CDS-3UTR TCA 90 bp | CCATACCAGATGCAGGAGGGATGGGAAGCATTTGCAAGGGCCAGAGAGAGAGGTAACCATCACTTCTCTTaGTGCAGGCGAAGAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PYQMQEGWEAFARARERGNHHFS*CRRRTW Trigger: CCAAGTTCTTCGCCTGCATCAAGAGAAGTGATGGTT...ACCTCTCTCTCTGGCCCTTGCAAATGCTTCCCATCCCTCCTGCATCTGGTATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| CDS-3UTR CCA 90 bp | GGGGAGTCCTTAACCGTTTCTTTGGGGTTTCTGATGGTTAGGACAGGGTTGGAGCCCATCTGGTACCTGTaGTTCAGGCTCTTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GESLTVSLGFLMVRTGLEPIWYL*FRLFFW Trigger: CCAGAAGAAGAGCCTGAACCACAGGTACCAGATGGG...CTCCAACCCTGTCCTAACCATCAGAAACCCCAAAGAAACGGTTAAGGACTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| CDS-3UTR GCA 90 bp | GACAGGGGAGAGGAAGGCAGCAATGACTTGGTTGAAGCCAGAAACACGGCTCAGTCTGATCACTACGTCTaGATTGCAAAACGCCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRGEEGSNDLVEARNTAQSDHYV*IAKRLL Trigger: CAACAGGCGTTTTGCAATGCAGACGTAGTGATCAGA...CTGAGCCGTGTTTCTGGCTTCAACCAAGTCATTGCTGCCTTCCTCTCCCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
||
| 3UTR CAA 72 bp | TGCAATTGGTTTGCTGGGAAGGCATTTGAGTGGCTGTaGCTCAGCTGCCATCTGGCACTTTGTCCCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CNWFAGKAFEWL*LSCHLALCPKG Trigger: ACCTTTGGGACAAAGTGCCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAACCAATTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS-3UTR TCA 90 bp | GCAATTGGTTTGCTGGGAAGGCATTTGAGTGGCTGTTGCTCAGCTGCCATCTGGCATACTGAATCCTCTTaGTGGGGTTGCCATAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: AIGLLGRHLSGCCSAAIWHTESS*WGCHRC Trigger: ACATCTATGGCAACCCCATCAAGAGGATTCAGTATG...CCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAACCAATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS-3UTR GCA 90 bp | GTGCAAAGTCTAATGCTACGAAAGGCATCAACACGGCACAAGAACGCTCACGGCAAGAACTTGGCCTGGTaGCCATTGATGCTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQSLMLRKASTRHKNAHGKNLAW*PLMLFS Trigger: AGAGAAGAGCATCAATGGGCACCAGGCCAAGTTCTT...GCCGTGAGCGTTCTTGTGCCGTGTTGATGCCTTTCGTAGCATTAGACTTTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS-3UTR CCA 90 bp | AAAGGACCTGGTAGGCCGGCTACACAGTCTTACAACAACCTTCAAGAGTTTCTGGCGAAGAACTTGGCCTaGTGCCCATTGATGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGPGRPATQSYNNLQEFLAKNLA*CPLMLF Trigger: GAAGAGCATCAATGGGCACCAGGCCAAGTTCTTCGC...CAGAAACTCTTGAAGGTTGTTGTAAGACTGTGTAGCCGGCCTACCAGGTCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS-3UTR CCA 90 bp | AAAGGACCTGGTAGGCCGGCTACACAGTCTTACAACAACCTTCAAGAGTTTCTGTTCAGGCTCTTCTTCTaGGTGATGCTAAGCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGPGRPATQSYNNLQEFLFRLFF*VMLSVS Trigger: GGACACGCTTAGCATCACCCAGAAGAAGAGCCTGAA...CAGAAACTCTTGAAGGTTGTTGTAAGACTGTGTAGCCGGCCTACCAGGTCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CAA 72 bp | TGTCATGAAATCAGCAGAAACAGGCACTGTTACATATaGATACCACCGCACAGGAAGCAAACAGGCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CHEISRNRHCYI*IPPHRKQTGRA Trigger: CGCCCTGCCTGTTTGCTTCCTGTGCGGTGGTATCAATATGTAACAGTGCCTGTTTCTGCTGATTTCATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS-3UTR GCA 90 bp | AGAGTGGCTGTCTATATTGTTAGTGATAAAGCTCTGCCTGTCTTAACCCCCATCTCACTACGTCTGCATTaGAAAACGCCTGTTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVAVYIVSDKALPVLTPISLRLH*KTPVAG Trigger: ACCCGCAACAGGCGTTTTGCAATGCAGACGTAGTGA...GATGGGGGTTAAGACAGGCAGAGCTTTATCACTAACAATATAGACAGCCACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS-3UTR GCA 90 bp | AAAGGACCTGGTAGGCCGGCTACACAGTCTTACAACAACCTTCAAGAGTTTCTGTCACAGAGGGTAATGTaGATCTTGCCATCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGPGRPATQSYNNLQEFLSQRVM*ILPSPS Trigger: AGAAGGAGATGGCAAGATGCACATTACCCTCTGTGA...CAGAAACTCTTGAAGGTTGTTGTAAGACTGTGTAGCCGGCCTACCAGGTCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CAA 72 bp | AAACTATATATTGCAATTGGTTTGCTGGGAAGGCATTaGAGTGGCTGTTGCTCAGCTGCCATCTGGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLYIAIGLLGRH*SGCCSAAIWHF Trigger: AAAGTGCCAGATGGCAGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAACCAATTGCAATATATAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CAA 72 bp | GTAAAACAACACCTTAAACTATATATTGCAATTGGTTaGCTGGGAAGGCATTTGAGTGGCTGTTGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VKQHLKLYIAIG*LGRHLSGCCSA Trigger: AGCTGAGCAACAGCCACTCAAATGCCTTCCCAGCAAACCAATTGCAATATATAGTTTAAGGTGTTGTTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| 3UTR CAA 72 bp | ATATGTCTTAATACGCATCAGGCAGCGATTTGGAAATaGCTACCATGTAAACGTCATCTGAAATATTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ICLNTHQAAIWK*LPCKRHLKYCE Trigger: CTCGCAATATTTCAGATGACGTTTACATGGTAGCAATTTCCAAATCGCTGCCTGATGCGTATTAAGACATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS GCA 90 bp | CGTCTGCATTGCAAAACGCCTGTTGCGGGTGCACCGGGGAGCAGCTaGAGGCGTCGGCCGGGCGCAGCAGCGTGGCTAGCAGCAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLHCKTPVAGAPGSS*RRRPGAAAWLAAGG Trigger: GCCTCCTGCTGCTAGCCACGCTGCTGCGCCCGGCCGACGCCTGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCAATGCAGACG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS GCA 90 bp | TTGGCTCTGATCACTACGTCTGCATTGCAAAACGCCTGTTGCGGGTaGACCGGGGAGCAGCTGCAGGCGTCGGCCGGGCGCAGCAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LALITTSALQNACCG*TGEQLQASAGRSSV Trigger: CACGCTGCTGCGCCCGGCCGACGCCTGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCAATGCAGACGTAGTGATCAGAGCCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS GCA 90 bp | ATCCACCTCCTTCTCGCTCACTGCTTTGGCTCTGATCACTACGTCTaGATTGCAAAACGCCTGTTGCGGGTGCACCGGGGAGCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IHLLLAHCFGSDHYV*IAKRLLRVHRGAAA Trigger: TGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCAATGCAGACGTAGTGATCAGAGCCAAAGCAGTGAGCGAGAAGGAGGTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS TCA 90 bp | TGTCATTCCCGGAATCCACCTCCTTCTCGCTCACTGCTTTGGCTCTaGTCACTACGTCTGCATTGCAAAACGCCTGTTGCGGGTGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: CHSRNPPPSRSLLWL*SLRLHCKTPVAGAP Trigger: CGGTGCACCCGCAACAGGCGTTTTGCAATGCAGACGTAGTGATCAGAGCCAAAGCAGTGAGCGAGAAGGAGGTGGATTCCGGGAATGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS-3UTR CAA 90 bp | CCTGGTGTGGCTAGAAACCCCAGCATGAGTGGAAAACAGAAAGGCCGTCTTTCAATTGCAAAACGCCTGTaGCGGGTGCACCGGGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGVARNPSMSGKQKGRLSIAKRL*RVHRGA Trigger: TGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCAAT...TGAAAGACGGCCTTTCTGTTTTCCACTCATGCTGGGGTTTCTAGCCACACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS TCA 90 bp | ATACTCCTTCTTTCCTCCAACGTCCAGCGAGACCCCGCACACTGCTaGAGAGGGGGCCGTGTAGATAAACTCGATGTCTTTGTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILLLSSNVQRDPAHC*RGGRVDKLDVFVRS Trigger: GGACCTGACAAAGACATCGAGTTTATCTACACGGCCCCCTCTTCAGCAGTGTGCGGGGTCTCGCTGGACGTTGGAGGAAAGAAGGAGTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017610.10 ENSMUST00000155707.3 |
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| CDS CCA 90 bp | GCGCAAGAACCATCACTTCTCTTGATGCAGGCGAAGAACTTGGCCTaGTGCCCATTGATGCTCTTCTCTGTGACCCAGTCCATCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AQEPSLLLMQAKNLA*CPLMLFSVTQSIQR Trigger: CCTCTGGATGGACTGGGTCACAGAGAAGAGCATCAATGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAGAGAAGTGATGGTTCTTGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017610.10 ENSMUST00000155707.3 |
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| CDS GCA 90 bp | CAAGAACCATCACTTCTCTTGATGCAGGCGAAGAACTTGGCCTGGTaGCCATTGATGCTCTTCTCTGTGACCCAGTCCATCCAGAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QEPSLLLMQAKNLAW*PLMLFSVTQSIQRH Trigger: GTGCCTCTGGATGGACTGGGTCACAGAGAAGAGCATCAATGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAGAGAAGTGATGGTTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017610.10 ENSMUST00000155707.3 |
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| CDS-3UTR CAA 90 bp | GACAGGGGAGAGGAAGGCAGCAATGACTTGGTTGAAGCCAGAAACACGGCTCAGAGGGTAATGTGCATCTaGCCATCTCCTTCTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DRGEEGSNDLVEARNTAQRVMCI*PSPSAF Trigger: AAAGGCAGAAGGAGATGGCAAGATGCACATTACCCT...CTGAGCCGTGTTTCTGGCTTCAACCAAGTCATTGCTGCCTTCCTCTCCCCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS GCA 90 bp | GTTGCCATAGATGTCATTCCCGGAATCCACCTCCTTCTCGCTCACTaGTTTGGCTCTGATCACTACGTCTGCATTGCAAAACGCCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VAIDVIPGIHLLLAH*FGSDHYVCIAKRLL Trigger: CAACAGGCGTTTTGCAATGCAGACGTAGTGATCAGAGCCAAAGCAGTGAGCGAGAAGGAGGTGGATTCCGGGAATGACATCTATGGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS-3UTR CAA 90 bp | CCTGGTGTGGCTAGAAACCCCAGCATGAGTGGAAAACAGAAAGGCCGTCTTTCATTCTCGCTCACTGCTTaGGCTCTGATCACTACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGVARNPSMSGKQKGRLSFSLTA*ALITTS Trigger: AGACGTAGTGATCAGAGCCAAAGCAGTGAGCGAGAA...TGAAAGACGGCCTTTCTGTTTTCCACTCATGCTGGGGTTTCTAGCCACACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS-3UTR CAA 90 bp | CCTGGATGCTTGAAGCTTGCTTGGAAAGGGGTGAAGAATGGCTTGGGAAGCTTGGAACCATCACTTCTCTaGATGCAGGCGAAGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGCLKLAWKGVKNGLGSLEPSLL*MQAKNL Trigger: CAAGTTCTTCGCCTGCATCAAGAGAAGTGATGGTTC...CAAGCTTCCCAAGCCATTCTTCACCCCTTTCCAAGCAAGCTTCAAGCATCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS-3UTR CAA 90 bp | AGAGTGGCTGTCTATATTGTTAGTGATAAAGCTCTGCCTGTCTTAACCCCCATCATCACTACGTCTGCATaGCAAAACGCCTGTTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RVAVYIVSDKALPVLTPIITTSA*QNACCG Trigger: CCCGCAACAGGCGTTTTGCAATGCAGACGTAGTGAT...GATGGGGGTTAAGACAGGCAGAGCTTTATCACTAACAATATAGACAGCCACTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS-3UTR CAA 90 bp | CCTGGTGTGGCTAGAAACCCCAGCATGAGTGGAAAACAGAAAGGCCGTCTTTCATCTTTGTCAGGTCCTTaGAACATCTTTATCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGVARNPSMSGKQKGRLSSLSGP*NIFICL Trigger: CAAGCAGATAAAGATGTTCAAAGGACCTGACAAAGA...TGAAAGACGGCCTTTCTGTTTTCCACTCATGCTGGGGTTTCTAGCCACACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS-3UTR CAA 90 bp | CCTGGTGTGGCTAGAAACCCCAGCATGAGTGGAAAACAGAAAGGCCGTCTTTCAATAAACTCGATGTCTTaGTCAGGTCCTTTGAACATC | + |
|
Preference number: 5 (lower is better) Translates to: PGVARNPSMSGKQKGRLSINSMS*SGPLNI Trigger: GATGTTCAAAGGACCTGACAAAGACATCGAGTTTAT...TGAAAGACGGCCTTTCTGTTTTCCACTCATGCTGGGGTTTCTAGCCACACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS GCA 72 bp | TGCAAAACGCCTGTTGCGGGTGCACCGGGGAGCAGCTaGAGGCGTCGGCCGGGCGCAGCAGCGTGGCTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CKTPVAGAPGSS*RRRPGAAAWLA Trigger: TGCTAGCCACGCTGCTGCGCCCGGCCGACGCCTGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS GCA 72 bp | ATCACTACGTCTGCATTGCAAAACGCCTGTTGCGGGTaGACCGGGGAGCAGCTGCAGGCGTCGGCCGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ITTSALQNACCG*TGEQLQASAGR Trigger: GCGCCCGGCCGACGCCTGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCAATGCAGACGTAGTGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS CAA 90 bp | CACTGCTTTGGCTCTGATCACTACGTCTGCATTGCAAAACGCCTGTaGCGGGTGCACCGGGGAGCAGCTGCAGGCGTCGGCCGGGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HCFGSDHYVCIAKRL*RVHRGAAAGVGRAQ Trigger: CTGCGCCCGGCCGACGCCTGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCAATGCAGACGTAGTGATCAGAGCCAAAGCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS CAA 72 bp | GGCTCTGATCACTACGTCTGCATTGCAAAACGCCTGTaGCGGGTGCACCGGGGAGCAGCTGCAGGCGTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSDHYVCIAKRL*RVHRGAAAGVG Trigger: GCCGACGCCTGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCAATGCAGACGTAGTGATCAGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS CAA 90 bp | GGGGGTGCCGCCCCGCGGTACCACGCGCAAGAACCATCACTTCTCTaGATGCAGGCGAAGAACTTGGCCTGGTGCCCATTGATGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GGAAPRYHAQEPSLL*MQAKNLAWCPLMLF Trigger: GAAGAGCATCAATGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAGAGAAGTGATGGTTCTTGCGCGTGGTACCGCGGGGCGGCACCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017610.10 ENSMUST00000155707.3 |
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| CDS CAA 90 bp | ACCTCCTTCTCGCTCACTGCTTTGGCTCTGATCACTACGTCTGCATaGCAAAACGCCTGTTGCGGGTGCACCGGGGAGCAGCTGCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TSFSLTALALITTSA*QNACCGCTGEQLQA Trigger: CGCCTGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCAATGCAGACGTAGTGATCAGAGCCAAAGCAGTGAGCGAGAAGGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS CAA 72 bp | GCCCCGCGGTACCACGCGCAAGAACCATCACTTCTCTaGATGCAGGCGAAGAACTTGGCCTGGTGCCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: APRYHAQEPSLL*MQAKNLAWCPL Trigger: CAATGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAGAGAAGTGATGGTTCTTGCGCGTGGTACCGCGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017610.10 ENSMUST00000155707.3 |
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| CDS CAA 72 bp | TCGCTCACTGCTTTGGCTCTGATCACTACGTCTGCATaGCAAAACGCCTGTTGCGGGTGCACCGGGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLTALALITTSA*QNACCGCTGEQ Trigger: CTGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCAATGCAGACGTAGTGATCAGAGCCAAAGCAGTGAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS GCA 72 bp | CTTCTCGCTCACTGCTTTGGCTCTGATCACTACGTCTaGATTGCAAAACGCCTGTTGCGGGTGCACCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLAHCFGSDHYV*IAKRLLRVHRG Trigger: TCCCCGGTGCACCCGCAACAGGCGTTTTGCAATGCAGACGTAGTGATCAGAGCCAAAGCAGTGAGCGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS CCA 72 bp | CAGCCCATCTGGTACCTGTGGTTCAGGCTCTTCTTCTaGGTGATGCTAAGCGTGTCCCAGGGCACAATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QPIWYLWFRLFF*VMLSVSQGTMK Trigger: CTTCATTGTGCCCTGGGACACGCTTAGCATCACCCAGAAGAAGAGCCTGAACCACAGGTACCAGATGGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017610.10 ENSMUST00000155707.3 |
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| CDS TCA 72 bp | CGGAATCCACCTCCTTCTCGCTCACTGCTTTGGCTCTaGTCACTACGTCTGCATTGCAAAACGCCTGTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RNPPPSRSLLWL*SLRLHCKTPVA Trigger: CGCAACAGGCGTTTTGCAATGCAGACGTAGTGATCAGAGCCAAAGCAGTGAGCGAGAAGGAGGTGGATTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS CAA 72 bp | TCATTCCCGGAATCCACCTCCTTCTCGCTCACTGCTTaGGCTCTGATCACTACGTCTGCATTGCAAAACGCC | + |
|
Preference number: 6 (lower is better) Translates to: SFPESTSFSLTA*ALITTSALQNA Trigger: GGCGTTTTGCAATGCAGACGTAGTGATCAGAGCCAAAGCAGTGAGCGAGAAGGAGGTGGATTCCGGGAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017610.10 |
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| CDS CAA 72 bp | CAGGGCACAATGAAGTCACAGAGGGTAATGTGCATCTaGCCATCTCCTTCTGCCTTTCCTGCAATTAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: QGTMKSQRVMCI*PSPSAFPAIRY Trigger: GTATCTAATTGCAGGAAAGGCAGAAGGAGATGGCAAGATGCACATTACCCTCTGTGACTTCATTGTGCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017610.10 ENSMUST00000155707.3 |
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